>input_sequence_83911
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----------------------------------ATGGCAGGAACACGAACTCTGCCCAGCGCCCCGACTACCCCGTGGG
CGCCCTGGTCCGGCGCCGAGATCCCTCATGAGGGCCATCTCCTTTCCCCCTGTTTCGCCGTTGCCCGCGACCTCCCGAGC
GCCATGGCCGAGAGCACGAGCTCTTGGTCCGCCCCGCGCCCCGACTACCTCATGGGCGCCCGATCCGGCGCCGCCTCTAT
GCCCGCGGCCACGCTACCTCGCACTCAGGTCGCCGGCAGCCCATTCCTACACTGCCACCGCCAGTGTTGTACTGCTGCC-
----------------------ACTGGCGAGCTAGGCGGCCGACGGGATGCCCTCTAG----------------------
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>chr7A_1_TraesCS7A01G115800
TCCCTGGTGCAGTCACGTCTCACTAATCGCTAATTATCTCGCTGCTGCATGAATGACGGTGTAAAAAA-A-AGCACGGCG
TGTAGTAGATTCGGTTTCTCCACGGCTGCGTGAAGCTAGGATTCTTGCACCTAGAATTCAAGAGAAAAAAGAGTTTTTGC
ATCTAATATACAACGTGCCAGTTATTGTAAGGCTGTTTTGGTTTTGCACGTGTGCCATCTATCTAGATGGGCTTGGTTGT
TCTACCTAAAGCCCAT--------GTAACTAACACATCTAATTTCGCTAAAAACAAGTAAATTGC-AAAAACCATCATAA
TTGGAGACCCT-AATTCAGAAAACCATCACATTTCGA-TTTTTTTTCAAATAA-CCGTTTCCATTCTGCTGACAGTTTTC
AAAAAACATTGATAAGTTACTAAACACATGTTAACAACATTTCTGGCAGATGGG-G-CCAATGTAAGTGATGATGTGGCA
CCGAAATCTCACGGTGTCTGGCGTGTACAGTAAGCTGCACATGGGACCCGCACGTCAGCCTCTACACTTC---CTCCTCC
ACCAGCGTTGACAGGGG---GA--A-----A-AATCACGCCAGCATCTGACCGGCGCACCACCGGATTCAGCCACCGGCC
GGCTCGCGAGACTCCGCCTCCGTGATCTCCCTCCACCTCATCTATCTATGCTCTTGCACGCGAGCCGCAGCAGCAGCCAT
GGCCAGGCACGGGGGCGCGAGCAGCGGCAGCGGCATCGACCAAGCACGGGGGCGCGAGCAGCCACGCAAGGGCACGAGCA
GGTGCAGCGGCCACGGCTACGCACGGGGGCGCGAGCAGCAGCAGCAGCAGCCACGCACGGGGGCACGAGCTGCAGCACCG
GCCGCACCCGTGCGCGCGAACAGCAGCACCGGCCACG-------------------------------------------
--------------------------------------------------CCCGAGCGCG--------------------
-----------CGAGCAGCAGCACCGGCCCGCGCCCGGGCACGCGACCATCAGCAGCGGCCACGCAAGGCGGCACGAGCT
ACCGCCTGCTACAGAGTACGGGCACGCTGCAGCGATGGCAGGAACACGAACTCTGCCCAGCGCCCCGACTACCCCGTGGG
CGCCCTGGTCCGGCGCCGAGATCCCTCATGAGGGCCATCTCCTTTCCCCCTGTTTCGCCGTTGCCCGCGACCTCCCGAGC
GCCATGGCCGAGAGCACGAGCTCTTGGTCCGCCCCGCGCCCCGACTACCTCATGGGCGCCCGATCCGGCGCCGCCTCTAT
GCCCGCGGCCACGCTACCTCGCACTCAGGTCGCCGGCAGCCCATTCCTACACTGCCACCGCCAGTGTTGTACTGCTGCC-
----------------------ACTGGCGAGCTAGGCGGCCGACGGGATGCCCTCTAGGTGTTTGAGGAAATTACTCAAC
AGGACCTCACGTCCGTCTCCTCACTCTGTTTGGCCTATGCCACGTTGACCTGACAATGGGACCTACCCGTCAGATTCGTT
GTCAAACGGCTCTAATAGATCTATCAGTGTTTTCTGAAAACTGTCAGTACAATCGTGAATGTTATTTGAAAAAAAAAAAT
CAATAGATGATGGTTTTCTGAATTAGGGTCCCTAATTGTGATGTGTTTTTGCAATTTACTCCAAAATAC-CTAACGCATC
-TAATCAATCTATCCGGCTTATCGCAGTAGGTCGAT-------GATGGTTCATCTTCCCCGTTGTTTTGTCTTCTGCTAG
A---CGCCGCCAC-ATCGACACCCCATGAAACGGCAGCA-----------------------------------------
-------ACTAA-------TAAATGGCAGCATTCACCACATCCCATTACCT------CCCCCTCCATTACCCTACATATG
CAGAAGAAAGTGCTAGATTTAAGCAGCCATCGCCTCATCGTAATCACGCCACTCGCCATCAC------GGCAAGATGGAG
ATACATGTTGCGCCACCGCGCCACGCCTGACGGAACCGCAGCACACCTGCAGCTGGTCACCGGTGCCTCGCAACTGCTTC
GCTCGGCCGACTGTACGTATGGTCTTCACCCGGTCAAGGCTGCCATCGGCACCCCATTCCACGCCGCCGTGGCACCACAA
AGAACCTTGGCGTTGTCCGTCGTGCAGTCTTTCAGATCCTCATCCCTTTGTTCATGCCTAGAGCGCGGCGAGCCGGTCCA
CGTGCAGTATTGTGCGAGAGGAACAAGAGGAGCTTTTGGCAAC-TTCCTTGCGCATGTTTCTTTTGTTTCCCCAGTATCA
CTAAGGCAACCGG--GCTTCTCGGATATCATTGTAATATGCAAGCTGAACTA---TATCATTGGCGTCAATCTTCCAATC
AGCTAGGTAAATGGGATACAATATA-----TAATCCATGATGCTTTCCTCTATTCCTTTTACATTATCTAATCTGAAGGT
CACCATTATTGA-CATCACATATTAGGATT
>chrUn_2
CCCATGGTGCAGCCACGTCTCACTAATCGCTAATTATCCCGCTGCTGCATGAATGTTGGTGTAAGAAA-AGAGCATGGCG
TGTAGTAGATTCGTTTTCTCCACGGCTGCACGAAGCTAGGATTTTTGCACTTAGAATCCAAGAGAAAAAATAATTTTTGC
ATCTAATGCCCAACGGGCCAGTTATTGTAAGATTGTTTTGGTTTTGCACGTGTGCCATCTATCTAGATGGGCTTGGTCAT
TCGACCTGAAGCCCATGTAAGTATGTAACTAACGCATCTAATTTCGCTAAA-----------------------------
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----------------------------------------------------------------AAAAA-CTAACGCATC
-TAATCAATCTACCCGGCTTATCGCAGTAGATCGAT-------GAGGGTTCGTCTTCCCCGTCGTTTTGTCTTCTGCTAG
A---CGCCGCCACGACCGACGCCCCATGAAACGGCAGCA-----------------------------------------
-------ACATATCTAGATGAAACGGCAGCATTCACCACATCTCATTACCT------CCCCCTCCATTACCGTACATATG
CGGAAGAAAGTGCTAGATTTAAGTAGCCATCGCCTCATCGTAAGCACGCGACTCGCCATCAC------GGCAAGATGGGG
-TACAAGTTGCGCCACCGCGCAGCGCCTGACGGAACCGCAGCACGCCTGCAGCTGGTAGCCGGCGCCCCGCATCTGCTTC
GCTCGGCCGACCGTACGTATGGTCTTCACCCGGTCGAGGCTGCCATTGACACCCCATTCCACACGGCCGTGGCACCACAA
AGAACCTTGGCGTTGTCCGTCGTGCAGCCTTTCAGACCCTCATCCCTTTGTTCATGCCTAGAACGCATAGAGCTGGTCCA
CGTGCAGTGTTGTGCGACAGGAACAAGAGGAGCTTTTGGCAGTTTTCCTTACGCATGATTCTTTTGTTTCCCCAATATCA
CTAGGGCAACTGGAAGCTTCTCGAATTTCATTGTAATGTGCAAGCTGAACTCCTCTAGCATTGGCGTTAATCTTCCAATC
AGCAAGGTAAATGGGATACAATATA-----TAATCCATGAGTGTTTCCTTGATTCCTTTTACATTATCTAATATGAAGGT
CACCATTATTGACCAACACATATTAGGATT
>chr2D_2
CCCATGGTGCAGCCACGCATCACTAATGGCTAATTATCCCGCTGCTGCATGAATGTCGGTGTAAAAAAAAGAGCATGGCG
TGTAGTAGATTCGTTTTCTCCACGGCTGCACGAAGCTAGGATTTTTGCACTTAGAATCCAAGAGAAAAAATAATTTTTGC
ATCTAATGCCCAACGGGCCAGTTATTGTAAGATTGTTTTGGTTTTGCACGTGTGCCATCTATCTAGATGGGCTTGGTCAT
TCGACCTGAAGCCCATGTAAGTATGTAACTAACGCATCTAATTTCGCTAAA-----------------------------
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----------------------------------------------------------------AAAAA-CTAACGCATC
-TAATCAATCTACCCGGCTTATCGCAGTAGATCGAT-------GAGGGTTCGTCTTCCCCGTCGTTTTGTCTTCTGCTAG
A---CGCCGCCACGACCGACGCCCCATGAAACGGCAGCA-----------------------------------------
-------ACATATCTAGATGAAACGGCAGCATTCACCACATCTCATTACCT------CCCCCTCCATTACCGTACATATG
CGGAAGAAAGTGCTAGATTTAAGTAGCCATCGCCTCATCGTAAGCACGCGACTCGCCATCAC------GGCAAGATGGGG
-TACAAGTTGCGCCACCGCGCAGCGCCTGACGGAACCGCAGCACGCCTGCAGCTGGTAGCCGGCGCCCCGCATCTGCTTC
GCTCGGCCGACCGTACGTATGGTCTTCACCCGGTCGAGGCTGCCATTGACACCCCATTCCACACGGCCGTGGCACCACAA
AGAACCTTGGCGTTGTCCGTCGTGCAGCCTTTCAGACCCTCATCCCTTTGTTCATGCCTAGAACGCATAGAGCTGGTCCA
CGTGCAGTGTTGTGCGACAGGAACAAGAGGAGCTTTTGGCAGTTTTCCTTACGCATGATTCTTTTGTTTCCCCAATATCA
CTAGGGCAACTGGAAGCTTCTCGAATTTCATTGTAATGTGCAAGCTGAACTCCTCTAGCATTGGCGTTAATCTTCCAATC
AGCAAGGTAAATGGGATACAATATA-----TAATCCATGA----------------------------------------
------------------------------
>chr7B_2
CCCATGGTGCAGCCATGTCTCAATAATCACTAATTATCCCGCTGTTGCATGAATGTCGGTGTAAAAAA-GGAGCACAGCA
TGTAGTAGATTCTTTTTCTCCATGGCTGCACGAAGCTAGGATTTTTGCACTTAGAATCCAAGAGAAAAAAGAATTTTTGC
ATCTAATGTCCAACGGGCCAGTTATTGTAAGGTTGTTTTGGTTTTGCACGTGTGCCATCTATCTAGATGGGCTTGGTCAT
TCGACCTAAAGCCCATGTAAGTATGTAACTAACGCATCTAATTTCGCT--------------------------------
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-------------------------------------------------------------CATAAAAA-CTAACACATG
-TAATCAATCTACCCAGCTTATCATAG---GTCGAT-------GAGGGTTCGTCTTCCCTGTCATTTTGTCTTCTGCTAG
A---C---------ACTGCCACCCCATGGAACGACAGCA-----------------------------------------
-------ACATATCTAGATGAAACAGAAACATTCACCACATCTCATTACCT------CCCCCTCCATTACCCTGCATATG
CGGAAGAAAGTGCTAGATTTAAGCAGCCATCGCCTCATCGTAAGCACGCGACTCGCCATCAC------AGCAAGCTGGGG
CTACATGTTGCGCCACCGCGCCGCGCCTGATGGAACCGCAGCACGCCTGTAGCTGGTAGCCGGTGCCCCGCATCTGCTTC
GCT--GCCGACCGTACGTATGGTCTTCACCCGGGCGAGGCTGCCATTGACACCCCATTCCACACGGGCTCGGCACCACAA
AGAGTCTTGGCGTTGTCTGTCGTGCGGCCTTTCAGACCCTAATCCCTTTGTTCATGCCTAGAGCGCAGCGAGCTGGTCCG
CGTGCAGTGTTGTACGAGAGGAACAAGAGGAGCGTTTGGCAGTTTTACTTACGCATGTTTCTTTTGTTTCCCCAATATCA
CTAGGGAAACTGGAAGCTTCTCGAATTTCATTGTAATATGCAAGCTAAACTGCTTAATCATTGGCGTTAATCTTCCAATC
AGCAAGGTAAATGGGATACAATATA-----TAATCCATGACTCTTTCCTCGATTCCTTTTACATTATCTAATCTGAAATT
CACCATTATTGACCATCACATATTAGGATT
>chr7A_139
AGAGA---------------------------------------------------------------------------
----------------------------------------------------------------AAAAAAGAATTTTTGC
ATCTAATGTCCAACGTGCCAGTTATTGTAAGGCTGTTTTGGTTTTGCACGTGTGCCATCTATCTAGATGGGCTTGGTCTT
TCAACCTAAAGCCCAT--------GTAACTAACGCATTTAATTTCGCTCAA-----------------------------
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----------------------------------------------------------------AAAAACCTAACGCATC
-TAATCGATCTACCCGGCTTATCGCAGTAGGTCAAT-------GAGGGTTCGTCTTCCCCGTCATTTTGTTTTCTGCTAG
AAGCCGCCGCCGCGACCGACCCCCCAAGAAAAGGCAGCAGCATATC------------------------CAGATGAAAC
GGCAGCAGCATATCCAGATGAAACGGCAACATTCACCACATCTCATTACCT------CCCCCTCCATTACCCTACATATG
CGGAAGAAAGTGCCAGATTTAAGTAGCCATCGCCTCATCGTAAGCACGCCACTCGCCATCACCATCACGGCAAGGTGGGG
ATAGATGTCGCGCCACCGCGCCGCGCCTGACGGAACTGCAGCTCGCCTGCATCTGGTAACCGGTGCCTCGCATCTGCTTC
GCTCGGTCGACCGTACGTATGATCTTCACCCGGTCGAGGCTGCCATCGACACCCCATTGCACGCCGCTGCGGCACCACAA
AGAACCTTGGCGTTGTCCGTCGTGCAGCCTTTCAGACCCTCATCCCTTTGTTCATGCCTAGAGCGTGGCGATCCGGTCCG
CATGTAGTGTTGTGCGAGAGGAACAAGAGGAGCTTTTGGCAGTTTTCCTTGCGCATGTTTCTTTTGTTTCCTCAATATGA
CTAGGGCAACCGGAAGCTTCTTGGATTTCATTGTAATGTGCAAGCTGGACTCCTCTATCATTGGCGTCAATCTTCCAATC
AGCAAGGTAAATGGGATACAATATAATATATAATACATGACTCTTTCCTCGATTCCTTTTACATTGTCTAATCTGAAGGT
CACCATTATTGACCATCACATATTAGGATT
>chr1A_139
AGAGA---------------------------------------------------------------------------
----------------------------------------------------------------AAAAAAGAATTTTTGC
ATCTAATGTCCAACGTGCCAGTTATTGTAAGGCTGTTTTGGTTTTGCACGTGTGCCATCTATCTAGATGGGCTTGGTCTT
TCAACCTAAAGCCCAT--------GTAACTAACGCATTTAATTTCACTCAA-----------------------------
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----------------------------------------------------------------AAAAACCTAACGCATC
-TAATCGATCTACCCGGCTTATCGCAGTAGGTCGAT-------GAGGGTTCGTCTTCCCCGTCGTTTTGTTTTCTGCTAG
AAGCCGCCGCCGCGACCGACCCCCCAAGAAAAGGCAGCAGCATATT------------------------CAGATGAAAC
GGCAGCAGCATATCCAGATGAAACGGCAACATTCACCACATCTCATTACCT------CCCCCTCCATTACCCTACATATG
CGGAAGAAAGTGCCAGATTTAAGTAGCCATCGCCTCATCGTAAGCACGCG-----CCATCACCATCACGGCAAGGTGGGG
ATAGATGTCGCGCCACCGCGCCGCGCCTGACGGAACTGCAGCTCGCCTGCATCTGGTAACCGGTGCCTCGCATCTGCTTC
GCTCGGTCAACCGTACGTATGGTCTTCACCCGGTCGAGGCTGCCATCGACACCCCATTGCACGCCGCCGCGGCACCACAA
AGAACCTTGGCGTTGTCCGTCGTGCAGCCTTTCAGACCCTCATCCCTTTGTTCATGCCTAGAGCGTGGCGATCCGGTCCG
CATGTAGTGTTGTGCGAGAGGAACAAGAGGAGCTTTTGGCAGTTTTCCTTGCGCATGTTTCTTTTGTTTCCTCAATATGA
CTAGGGCAACCGGAAGCTTCTTGGATTTCATTGTAATGTGCAAGCTGGACTC--CTATCATTGGCGTCAATCTTCCAATC
AGCAAGGTAAATGGGATACAATATAATATATAATCCATGACTCTTTCCTCGATTCCTTTTACATTGTCTAATCTGAAGGT
CACCATTATTGACCATCACATATTAGGATT
>chr6A_139
AGAGA---------------------------------------------------------------------------
----------------------------------------------------------------AAAAAAGAATTTTTGC
ATCTAATGTCCAACGTGCCAGTTATTGTAAGGCTGTTTTGGTTTTGCACGTGTGCCATCTATCTAGATGGGCTTGGTCTT
TCAACCTAAAGCCCAT--------GTAACTAACGCATTTAATTTCGCTCAA-----------------------------
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----------------------------------------------------------------AAAAACCTAACGCATC
-TAATCGATCTACCCGGCTTATCGCAGTAGGTCGAT-------GAGGGTTCGTCTTCCCCGTCGTTTTGTTTTCTGCTAG
AAGCCGCCGCCGCGACCGACCCCCCAAGAAAAGGCAGCGGCATATC------------------------CAGATGAAAC
GGCAGCAGCATATCCAGATGAAACGGCAACATTCACCACATCTCATTACCT------CCCCCTCCATTACCTTACATATG
CGGAAGAATGTGCCAGATTTAAGTAGCCATCGCCTCATCGTAAGCACGCCACTCGTCATCACCATCACGGCAAGGTGGGG
ATAGATGTCGCGCCACCGCGCCGCGCCTGACGGAACTGCAGCTCGCCTGCATCTGGTAACTGGTGCCTCGCATCTGCTTC
GCTCGGTCGACCGTACGTATGGTCTTCACCCGGTCGAGGCTGCCATCGACACCCCATTGCACGCCGCCGCGGCACCACAA
AGAACCTTGGCGTTGTCCGTCGTGCAGCCTTTCAGACCCTCATCCCTTTGTTCATGTCTAGAGCGTGGCGATCCGGTCCG
CATGTAGTGTTGTGCGAGAGGAACAAGAGGAGCTTTTGGCAGTTTTCCTTGCGCATGTTTCTTTTGTTTCCTCAATATGA
CTAGGGCAACCGGAAGCTTCTTGGATTTCATTGTAATGTGCAAGCTGGACTCCTCTGTCATTGGCGTCAATCTTCCAATC
AGCAAGGTAAATGGGATACAATATAATATATAATCCATGACTCTTTCCTCGATTCCTTTTACATTGTCTAATCTGAAGGT
CACCATTATTCACCATCACATATTAGGATT
>chr6A_139
AGAGA---------------------------------------------------------------------------
----------------------------------------------------------------AAAAAAGAATTTTTGC
ATCTACTGTCCAACGTGCCAGTTATTGTAAGGCTGTTTTGGTTTTGCACGTGTGCCATCTATCTAGATGGGCTTGGTCTT
TCAACCTAAAGCCCAT--------GTAACTAACGCATCTAATC-------------------------------------
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-----------------------------------------------------------GATCTACCCATAAAGCTTCGC
GAGATTGTTTAAAA------------------------------------------------------------------
------------------------------------------------------------------------AAAAAATC
-TAATCGATCTACCCGGCTTATCGCAGTAGGTCGAT-------GAGGGTTCGTCTTCCCCATCGTTTTGTTTTCTGCTAG
AAGCCGCCGCCGCGACCGACCCCCAAAGAAAAGGCAGCAGCATATCCAGATGAAACGGCAGCAGCATCTCCAGATGAAAC
GGCAGCAGCATATCCAGATGAAACGGCAACATTCACCACATCTCATTACCT------CCCCATCCATTACCCTACATATG
CGGAAGAAAGTGCCAGATTTAAGTAGCCATCGCCTCATCGTGG----------------------CACGGCAAGGTGGGG
ATAGATGTCGCGCCACCGCGCCGCGCCTGACGGAACTGCAGCTCGCCTGCATCTGGTAACCGGTGCCTCGCATCTGCTTC
GCTCGGTCGACCGTACGTATGGTCTTCACCCGGTCGAGGCTGCCATCGACACCCCATTGCACGCCGCCGCGGCACCACAA
AGAACCTTGGCGTTGTCCGTCGTGCAGCCTTTCAGACCCTCATCCCTTTGTTCATGCCTAGAGCGTGGCGATCCGGTCCG
CATGTAGTGCTGTGCGAGAGGAACAAGAGGAGCTTTTGGCAGTTTTCCTTGCGCATGTTTCTTTTGTTTCCTCAATATGA
CTAGGGCAACCGGAAGCTTCTTGGATTTCATTGTAATGTGCAAGCTGGACTCCTCTATCATTGGCGTCAATCTTCCAATC
AGCAAGGTAAATGGGATACAATATAATATATAATCCATGACTCTTTCCTCGATTCCTTTTACATTATCTAATCTGAAGGT
CACCATTATTGACCATCACATATTAGGATT
>chr7A_285
AAGTA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------ATTGCAAAAAACCACCACAA
TTGGGGACCCT-AATTCAGAAAACCGCCACCTTTCGATTTTTTTTTCAAATAA-CCACCACCATTCTGCTGACAGTTTTC
AAAAAACACTGATAGGTCACTAAACACATGTTAACAACGTTTCTGGCAGATGGGTG-CCGATGTAAGTGATGATGTGGCA
CTGAAATCTCACGGTGTTTGGCCTGTACAGTAAGCTGCACATGGGACCCGCACGTCAGCCTCTATACTTC---CTCCTCC
ACAAGCGTTGACAGGGG---AA--A-----ATAATCACACCTGCATCTGACCGGCGCACCACCGGATTCAGCCGCCGGCC
GGCTCGCGAGCCTCCGCCTCCGTGATCTCCCTCCACCTTGTCTATCTATGCTCCTGCACGCGAGCCGCATCAGCGACCAT
GCCCAGGCACGGGGGCGCGAGCAGCAGCGGCGGCATCGACCAGGCACGGGGGCGCGAGCAGCCACGCAAGGGCACGAGCA
AGTGCAGCGGCCACGGCTACGCACGGGGGCGCGAGCAGCAGCAGCAGCAGCCACGCACGGGGGCACGAGCTGCAGCACCG
GCCGCGCCCATGCGCGCGAGCAGCAGCACCGGCCTCGGGACGGGCCGCGAGCAGCAGCACCGGCCGCGCCCGGGCACGCG
ACCATCAGCACCGGCCACGCCCGGGCACGCGACCATCAGCACCGGCCACGCGACGGGCCG--------------------
-----------CGAGCAGCAGCACTAGCC-GTGCCCGGGCACGCGACCATCAGCAGCGGCCACGCAAGGCGGCTCGAGCT
ACCGCCTGCTACAGAGTACGGGCACGCCGCAGCGATGGCAGGAACGCGAACTCTGCCCAGCGTCCCGACTACCCCGTGGG
CGCCCTGGTCCGGCGCCGAGATCCCTCATGAGGGCCATCTCCTTCCCCCCTATTTCGCCGTTGCCCGCGACCTCCCGAGC
ACCATGGCCGAGAGCACGAGCTCTTGGTCCGCCCCGCGCCCCGACTACCCCATGATCGCCTGGTCCGGCGCCGCCTCTCT
GCCTGCGGCCGCGCTACCTCGCACTCAAGTCACTCGCAGCCCATTCCTACA-----------------------CTGCC-
----------------------ACTGGCGAGCTAGGCAGCCGACGGGATGCCCTCTAGGTGTTTGAGGAAATTACTCAAC
AGGACCTAACGTCCGTCTCCTCACTCTGTTTGGCATATGCCAGGTTGACCTGACAATAGGATCTACCCGTCAGATTCGTT
GTCAAACGGCTCTAATCAATCGATCAGTGTTTTCTGAAAACTGTCAGCACAATCCTGGCGGTT-----------------
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----------ATTTGAAAAAAAATC-----GAAAGG-TGGTGGTTTTTTGAATTAGGGTCCCCAATTGTGGTGG-TTTTT
TGCAATTTACTCC-----------------
>chr7A_286
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-------------------------------------------------------AGTAAATTGCAAAAAA--ACCACAA
TTGGGGACCCT-AATTCAAAAAATCACTACCATTCCA-TTTTTTTTCAAAAAC-CCACCACCATCGTGCTGACATTTTTC
AAAAAACACTGATAGGTTACTAAACACATGTTAACAACGTTTCTGACAGATGGG-GCCCACTGTAAGTGATGACGTGGTA
GCGAAATCTCACGGTGTTTGTTTTGTACCATAAGCTGCACAAGGGACCCACACATCAGCCTCTACACTTGTTTCTTCTCC
ACCGGCGCTGGCAGGAAAGAGA--A-----AATAGCACGTCCGCATCTGACTGGCGCACCACCGGATTCAGCCACCGGCC
GGCTCGCGAGTCTCCGCCTCTGCAATCTTCCTCCACCTCCTCCCTCTATGCTTCAACACGTCA---GCAGCAGCAGCCAT
GGCCAGGCACGGGGGCGCGGGCGGCGGCGGTGGCCTCGGCCAGGCACGGAGGCGCGAGCAGCCACGCAAGAGCGCGAGCA
GCTGCAGCGGCCATGGCCACGCACGGGGGCGCGAGCAACAGA--------------------------------------
---------------------------ACCGGTCGCG-------------------------------------------
--------------------------------------------------CCCGGGCACG--------------------
-----------CGAGCTGCGGCACCGGCC-GTGCCCGGGCACACGAGCTGCAGC--------------------------
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>chr3B_286
--------------------------------------------------------------------------------
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-------------------------------------------------------AGTAAATTGCAAAAAACCACCATAA
TTGGGGACC-TTAATTCAGAAAACCATCATCTTTCGA-TTTTTTTTCAAATAA-CCACCACCATTCTGCTGACAGTTTTC
AAAAAACACTGATAGATTACTAAACACATGTTAACAACGTTTCTGGCAGATGGG-GCCCAATATAAGTGATGACATGGCA
CCGAAATCTCACGGTGTTTGGCCTGTACAGTAAGCTGCACATGGGACCCGCACGTCAGCCTATACACTTC---CTCCTCC
ACCAGCGTTGACAGGGG---GA--A-----ATAATCACGCCTGCATCCGACCGGCGCACCACCGGATTCAGCCGCCGGCC
GGCTCGCGAGCCTCCGCCTCCGTGATCTCCCTCCACCTCATCTATCTATGCTCCTGCACGCGAGCCGCAGCAGCGGCCAT
-------------------------------------GGCCAGGCACGGGGGCGCGAGCAGCCACGCAAGGGCACGAGCA
AGTGCAGCGGCCACAGCTATGCACGGGGGCGCGACCAGCA-------------------------------GCAGCACCG
GCCGCGCCCGTGCGCGCGAGCAGCAGCACCGGCCACG-------------------------------------------
--------------------------------------------------CGACGGGCCG--------------------
-----------CGAGCAGCAGCACCGGCC-GCGCCCGGGCACGCGACCATCAGCAGCGGCCACGCAAGGCGGCACGAGCT
ACCACCTGCTACAAAGTACGGGCACGCCGCAGCGATGGCAGGAACGCGAACTCTGCCCAGCGCCCCGACTACCCCGTGGG
CGCCCTGGTCCGGCGCCGAGATCCCTCATGAGGGCCATCTCCTTCCCCCCTATTTCGCCGTTGCCCGCGACCTCCCGAGC
ACCATGGCCGAGAGCACGAGCTCTTGGTCTGCCCCGCGCCCCGACTACCCCATGGGCGCCCGGTCCGGCGCCGCCTCTCT
GCCCGCGGCCGCGCTACCTCGCACTCAGGTCACTCGCAGCCCATTCCTACA-----------------------CTGCCA
CCGCCGGTGTTGTACTGCTGCCACTGGCGAGCTAGGCGGCCGACGGGATGCCCTCTAGGTGTTTGAGGAAATTACTCAAC
AGGACCTAACATCCGTCTCCTCACTCTGTTTGGCCTATGCCACGTTGACCTGACAATGGGACCTACCTGACATATTCGTT
GTTAAACGGCCCTAATTGATCGATCAGTGTTTTCTGAAAACTGTCAGCACAATTGTGGCGGTT-----------------
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----------ATTTGAAAAAAAATC-----GAAAAGATGATGGTTTTCTGAATTAGGGTCCCCAATTGTGATGGCTTTTT
TGCAATTTACTC------------------
>chr4D_286
--------------------------------------------------------------------------------
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-------------------------------------------------------AGTAAATTGTAAAAAACCGCCACAA
TCGCGGACC-T-AATTCAGAAAACTACCACCTTTCAAATTTTTTT--AAATAA-CCACCATCATTCTGCTGACAGTTTTC
AAAAAACACTGACAGGTTACTAAACACATGTTAACAACGTTTCTGGCAGATGGG-GCCCGATGTAAGTGATGATGTGGCA
CCGAAATCTCACGGTGTTTGGCCTGTATCGTAAGCTGCACATGGGACCCGCACGTCAGCCTCTACACTTC---CTCCTCC
ACCAGCGTTGACAGGGG----A--A-----ATAATCACGCCTGCATCCGACCGGCGCACCACCGGATTCAGCCGCCGGCC
GGCTCGCGAGCCTCCGCCTCCGTGATCTCCCTCCACATCGTCTATCTATGCTCCTGCATGTGAGCCGCAGCTGCGGCCAT
-------------------------------------GGCCAGGCACGGGGGCGCGAGCAGCCACGCAAGGGCACGAGCA
AGTGCAGCGGCCACGGCTACGCACGGGGACGCGCGCAGCAGCAGCAGCAGCCACGCACGGGGGCACGAGCTGCA------
-------------------------GCACCGGCCACG-------------------------------------------
--------------------------------------------------CCCGGGCGCG--------------------
-----------CGAGCAGCAGCACCGGCC-GCGCCCGGGCACGCGACCATCAGCAGCGGCCATGCAAGGCGGCACGAGCT
ACCACCTGCTACAGAGTACGTGCACGCCGCAGCGATGGCAGGAACGCGAACTCTGCCCAGCGCCCCGACTACCCCGTGGG
CGCCCTGGTCCGACGCCGAGATCCCTCATGAGGGCCATCTCCTTCCCCCATATTTCGCCGTTAACCGCGACCTCCCGAGC
ACCATGGCCGAGAGCACGAGCTCTTGATCTGCCCCGCGCCCCGACTACCCCATGGGCGCCCGGTCCGGCGCCGCCTCTCT
GCCCGCGGCCGCGCTACCTCGCACTCAGGTCACTCGCAGCCCATTCCTACA-----------------------CTGCCA
CCGCCGGTGTTGTACTGCTGCCACCGGCGAGCTAGGCGGCCGACGGGATGCCCTCTAGGTGTTTGAGGAAATTACTCAAC
AGGACCTAACGTCCGTCTCCTCACTCTGTTTGGCCTATGCCACGTTGACCTGACAATGGGACCTACCCGTCAGATTCGTT
GTCAAACGGCTCTAATCGATCGATCAGTGTTTTCTGAAAACTGTCAGCACAATCGTGGCGGTT-----------------
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----------ATTTGAAAAAAACTC-----GAAAGG-TGGTGGTTTTCTGAATTAGGGTCCCCAATTATGGTGG-TTTTT
TGCAATTTATTCC-----------------
>chr5B_286
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------AGTAAATTGCAAAAAATCACCACAA
TTAGGGACCCT-AATTCAGAAAACCACCACCATTTGATTTTTTTT--CAAAAACCCGCCATCATTGCGCTGATAGTTTTC
AAAAAACACTGATCGGTTATTAAACACATGTTAACAACGTTTCTGACAGAACGG-GCCCACTGTGAGTGATGACGTGGCA
CCGAAATCTCACGGTGTTTGGTTTGTGTAATAAGCTGCACAAGGGACCCGCACGTCAGCCTCTACACTTCTTTCTTCTCC
ACCAGCGCTGGCAGGAAAAAAAAGAAAAAGAATAGCACGTCCGCATCTGACCGGCGCACCACCGGATTCAGCCACCGGCC
GGTTCGGGAGTCTCCGCCTCTGCAATCTTCCTCCACCTCCTCCCTCTATGCTTGAGCACGCGA---GCAGCAGCAGCCAT
-------------------------------------GGCCAGGCACGGGGGCGCGAGCAGC------------------
--TGCAGCGGCCACGGCCACGCAAGGGGGTGCGAGCAGCAGC----------------------------------ACCG
GCCGCACCCGGGCGCCTGAGCAGCAGCACCGGCCACA-------------------------------------------
--------------------------------------------------CACGGGGACG--------------------
-----------CGAGCAACAGCACCGGCC-GTGCCCGGGCACGCGAGCT-------------------------------
ACCGCCTGCTCCAGAGCACGGGCGTGTCGCAGTTGTGGCCGGGTCGCGAGCTCCGCCCCTTGCTTCGACCACCCCGTGGG
CGCCCTGGTCCGGCGCCG--------------------------------------------------------------
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------------------------------
>chr4B_286
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-------------------------------------------------------AGTAAATTGCAAAAAACCACCACAA
TTAGGGACCCC-AGTTCAGCAAACCACCACCATTCGTTTTTTTTC--AAAAAC-CCGCCACCATTGTGCTGACAGTTTTC
AAAAATCACTGATCGGTTACTAAACACATGTTAACAACGTTTTTGACAGACGGG-GCCCACTATGAGTGATGACGTGGCA
CCGAAATCTCATGGTGTTTGGTTTGTACAATAAGCTGCACAAGGGACCCACACGCCAGCCTCTACACTTCTTTCTTCTCC
ACCAACGCTGGCAGCCA---AA--AAAAAGAATAGCACGTCCGCATCTGACCGGCGCACCACCGGATTCAGCCACCGGCC
GGTTCGGGAGTCTCCGCCTCTGCGATCTTCCTCCACCTCCTCCCTCTATGCTTGAGCACGCGA---GCAGCAGTAGCCAT
-------------------------------------GGCCAGGCACGGGGGCGCGAGCAGCCACGCAAGAGCGCGAGCA
GTTGCAGCGGCCATGGCCACA----------------------------------CACGGGGGCGCGAGCAGCA------
-------------------------GCACCGGCCGCG-------------------------------------------
--------------------------------------------------GCCGGGCGCGTGAGTAGCAGCACCGGCCAC
ACAAGGGGACACGAGCAACAGCACCGGCC-GTGCCCGGGCACGCGA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr7B_1574
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------TAACGCATC
TTAATCAATGTATCCGGCTTATCGCAGTAGGACAAT-------GAGGGTT--------CCGTCGTTTTGTCTTCTGCTAG
G---CGCCGCCACGACCGACGCCCCATGAAACGGCAGCA-----------------------------------------
-------A-ATATCCAGATTAAACGACACCATTCATCACATCCCATTACCCCCCTACCCCCCTCCATTATCCTACATATG
CGAAAGAAACTGCTAGATTTAAGCAGCCATCGCCTCATTGTAAGCATACCACTCGTC------ATCACGGCAAGATGGAG
CTACATATTGCGCCACCCCGCCGTGCCTGACGGAACCACGGCATGCCTACCGCTGGTCACCGGTGCCCCGCATCTGCTTC
GCTCGGTCGACCGTTCATATGGTCTTCACTGG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GCTGAACTCCTCTATCATTGGCGCCAATCTTCCAATC
AACAAGGTAAATGGGATACAATATA-----TAATACATGACTCTTTACTCGATTCCTTTTACATTATCTAATCTGAAGGT
CATCATTATTAACCATCACATATTAG----
>chr1A_1574
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------TAACGCATC
-TAATCAATCTACCCGGCTTATCACAGTAGCTCGATCGTCGCTGAGGGTTCGTATTCCCCG-CGTTTTGTCTTCTGCTAG
ACGCCGCCAT---GACCGACGCCCC------------------------------------------------ATGAAAC
GGCAGCAACATATCCAGATGAAACGGCAGCATTCATCACATCTTATTACCT------CCCCCTCCATTATCCTACATATG
CGGAAGAAAGTGCTAGATTTAAGCAGCCATCGCCTCATCGTAAGCTCGCAACTCGCC------ATCACGGCAAGATGGGG
CTACATGTTG-GCCACCGCGCCGCACCTGACGGAACCACATCACGCCTATAGATGGTCGCTGGTGCCCCGCATCTGCTTC
GCTCGGTCGACCGTCCGTATGGTCTTCGCTCG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GCTGAACTCCTCTATCATTGGCGTCCATCTTCCAATC
AGCAATGTAAATGGGATACAATATA-----TAATCCATGACTCTTTACTCGATTCCTTTTATATTATCTAATCTGAAGGT
CACCATTATTAACCATCACATATTAGGATT
>SNPs
S--S--------S-------------------------S----------------S------------------------
-------------S---------------SS------------S------S------S--------------S-------
-------S-S-------------------------------------------------------------------SS-
--S------------------------------S-----------------SSSS-------------------S-----
----S-------------------------S--------------------------SSS--------------------
--------S-----S-----------------------S-----------------------------------------
-----------------S----S---------------------------------------------------------
-----------------------------------------S--------------------------------------
----------S------------------------------------------S--------------------------
----------------------------S-------------S-------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
------------------------------------------------------S-------------------------
-----------------------------S--------------------------------------------------
---------------------------S-----------------S----------------------------------
--------------------------------------------S------S----------------------------
S------------------------------------------------S------------S---------------S-
----------S--------------------S-SS----------------SSSSSSSSSSSSSSSSSSSSSSS------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
----------------S----S-------------------------S---------SSS---SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S--S-S-----------
---------------------------------------------S-----S----------S-----------------
---------------S----------------------------------------------------------------
---------SS------------S--------------------------------------------------------
-S-----------------------------------------S------------------------------------
----------------------S---------------------S---------------------------S-------
-----------S-----------------------S------------S-------------------------------
---------------------------S--------S-------------------------------------------
--------S--------------------------------SS-------------------------------S-----
---S----------------------S------------------------S----------------------------
---S----------------------------------------------S-----------------------------
------------------------------
>forward_56
------------------------------------TCTCGCTGCTGCATGAATGA------------------------
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------------------------------
>reverse_1423
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------AGTGTTGTACTGCTGCCA
CT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>forward_94
--------------------------------------------------------------------------ACGGCG
TGTAGTAGATTCGG------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>reverse_1425
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------TGTTGTACTGCTGCCA
CTGG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>forward_1419
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------CCCATTCCTACACTGCCACC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>reverse_2362
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------ACTTCCTTGCGCATGTTTCT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
