>input_sequence_83877
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ATGTACTGTCATTGG-----------------------------------------------------------------
-----------------------------------TTTACTTTATTACTAGTCAAGCA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------CACCGACGCGGCCATCTCCTGTGGACAGGTGAGCTCTG
CCTTGAGCCCCTGCATCAGCTATGCCCGCTGCAAGGGCGCCAACCCGCCTGCGGCCTGCAGCAGCGGCGTCAGGAGTCTG
GCGGGCGCAGCGCGGAGCACCGCTGACAAGCAAGCGGCGTGCAAGTGCATCAAGAGCGCTGCGGGTGGGCTCAATGCTGG
CAAGGCCGCCGGCATTCCCTCCAAGTGTGACGTCAGCATCCCCTACGCCATCAGCTCTTCTGTCGACTGCTCTAAGATTC
GCTGA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr3D_1_TraesCS3D01G051900
GCTGAACGTGTGCTGAACTCGGAGGTGCCGTGCGTTCGGTACTTGATTGGTCGGATCGTGAAGACGTACGACTACATCAA
CCGCGTTGTGTTAACGCTTCCGCTTTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGCATCACC
ATGATCTTGCGTGTGCGTAGAATTTTTTTGAAATTACTACGTTCCCCAACATTATTTCGACGGGATCTGATTATAACGAC
CCATAGGATCAAACTTTCCTTACCGTATTATTTACGGTTTTGCTAATTCTCAGTCGACTGAGAAACGAAGTCTCAGTGGA
TTCTATTATCATCACGCATTTTGGTTTATTTCTTTATTGAGGGCTTCATGCATGTCAGCTGTAA-CCGCTTCATTCGGCC
ACTCTCTTGGGTCTTTCTGATTGCA-GGCCAAGACCTAGAGATGGGCTTTTCTTGTTTTCATATA--GAGAACCTACCGG
TAGAAGGAGATGTTGTGTGTGTTTCTTTTTTCATTTTCCATTCTAGTGTCTGTCCATTTTTGTTTGC--TCTTCTATTTC
TTTGTTGCATAAAAGAATATTTTTTAACAATACAAACGTATTTTTGAAGGAAACGATAAGAACAAAAGTGGGAGAAAGCA
AGAAGCATGAAGAGAAAGAACATTAGTGCAACGATCGAGAAAAGACAAATGGGCTGATTCCATGCCCACTAAGTAGAGAT
CACATGTAGGACTAGCTAAGGAAACTAATTATTCAACGCAAGTTAC-GTCAGCCGAATGACTAAC--AAAGTGTTAGTAA
CCTGAGGTGTAGATGCACACTATTAGTTATCCAGTGCCTTTTCGCTTCATAAACATATTCCTCTTCACCTCTTTTCCTGA
TGGCGTCGTGTATGGATCGAGACCCTGCAACAGTGGCACATCCTAGGATGAAGCACA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GCGGATCCGTATTCAATTATGCACATCTCGAACTCTCTTCCCAATGATGCGGTATGTGGATCGAGAAATTAT
ATGTACTGTCATTGG-----------------------------------------------------------------
-----------------------------------TTTACTTTATTACTAGTCAAGCA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------CACCGACGCGGCCATCTCCTGTGGACAGGTGAGCTCTG
CCTTGAGCCCCTGCATCAGCTATGCCCGCTGCAAGGGCGCCAACCCGCCTGCGGCCTGCAGCAGCGGCGTCAGGAGTCTG
GCGGGCGCAGCGCGGAGCACCGCTGACAAGCAAGCGGCGTGCAAGTGCATCAAGAGCGCTGCGGGTGGGCTCAATGCTGG
CAAGGCCGCCGGCATTCCCTCCAAGTGTGACGTCAGCATCCCCTACGCCATCAGCTCTTCTGTCGACTGCTCTAAGATTC
GCTGATCAACTACTGGTCACCATGTTTGCCGCTAATAGCTCCATCC-----------------ATCGATGGTGAGTACGT
TGAGGT--------CACACACACACACAC------------GAATAAAAGCTCCCGTATTATCTCCATGTGTGTGTGAGA
GAGAGAGAGTGCACGTACGTCGAGCAAGCTCAGCATGGCCGAC--CACTGTTGTATCGATGTTTGGTTGTTCCTTCTCTG
GCTTCGAGGAGATACATGGGTTTGTCATAGTTTTTACCATGTGCACTTTTGATATATTGATGAGAT----------TCGG
CTCTACTCTCTACTCACGCAAGTCGTTATTGCAC-----ATGTATGACCGGGAGTCTGGGAAAGCACTCCATTCAAGTTC
C-TGCTTCAGGGAAAATATAGGAATGGAAACAAACCAATTCTTTAGAATGGAACCATGACATTCCACTCATTT-GGTTCC
TCTAATAAACACACCCTAAAACCGTGAGAGATGTCAAAGAAATTTAGTTAATGTAACCACCTA------------CTGGT
TTGTATTTAAGAAATCTTAATAG---CGGTATATTTCTAGAAAAGAGTCCCCCACGGAATAAGATCCTCTTGTCAAATGG
AAACAACTTGAGGTCTGTAGGTCTGCTCAAATTACCATCTTCCAGTTCGCCACAAAATACTTCTGGATAGATTTAGCTAA
TTTTCAAACCATGTACACGTAAGTTCATTGTGCAAGATAGTATTTAATTAAGCACCAATTATTAGTGAGTACATCAACGA
AAATTTGGGATACTCATGATTGTGATG-------GTAAGTACAGTATACACTATGTTTTCTACAAATGGATCGGATAGTA
TGAAATGTTCAGAGCATCTACAACTGGACACCCGATAGCCGCCCCAAATGCCTGGGCGGGCTGCCCGGACAGTGCCCGGA
CGAGTTTTGGCCACCAAACCAGGCACCCCATACCTGGGCCAAATGCCTGGACAAATCGGCATTCCCCATATCCGGCCCTT
ATATGGGGTGGATATGTGGAGGCCCGGACGTGCCCGGGCATGC
>chr3D_212
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TTATTTCGACGGGATCTGATTATAAAGAC
CCATAGGATCAAACTTTCCTTGCCATATTGTTTACGGTTTTGCTAATTCTCAGTCGACTGAGAAACGAAGTCTTAGTGGA
TTCTATTATCATCAGGCATTTTGGTGTATTTCTTTATTGAGGGCTTCATGCATGTCAGCTGTAAG-CGCTTCATTCGGCC
ACTCTCTTGGGTCTTTCTGATTGCA-GGCCAATACCTAGAGATGGGCTTTTCTTGTTATCATATT--GAGAACCTACCGG
TAGAAGGAAATGTTGAGTGTTTTT-TTTTTTCATTTTCCATTCTACTGTCTGTCCATTTTTGTTTGC--TCTTCTATTTC
TTCGTTGCATAAAAGAATATTTTTTAACAATACAAACATATTTTTGAAGGAAATGATAAGAATAAAAGTGGGAGAAAGCA
AGAAGCGTGAAGAGAAAGAACATTAGTGAAACGATCAAGAAAAGACAAATAGGCTGATTCCATGCCCACTAAGTACAGAT
CACATGTAAGGCTAGCTAAGGAAACTAATTATTCAACGTAAGTTACCGTCAGCCGAATGACTTAC--AAAGTGTTTGTAA
CCTGAGG---AGATGCACACTATTAATTATCCAGTGCCCTTTCGCTTCATAATCATATTCCAATTCACCTCTTTTCGTGA
TGGCGTCGTGTATGGATTCAGACCCTGCGGCTGTGGCACATCCTCGGATGAACCACA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GCGGATCCGTATTCAATTCTGCACATCTCGAACTCTCTTCCAAATGATGCCGTATGTGGATCGAGAAACTAT
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------
>chr3B_212
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TTATTTCGACGGGATCTAATTATAAAGAC
CCATAGGATCAAACATTCATGATCATATTGTTTACGGTTTTGCTAATTCTCAGTTGAGCGAGAAACTAAGTCTCAGTCGA
TTCCATTATTATCGGACATTTTGGTTTATTTCTTTATTGAGGGCTTCCTGCATGCCAGCTGCAACCCACTTCATTCGGCC
ACTCTCTTGGGTCTTGCTGACTGCTGGGCCAAGACCTAGAGATGGACTTTCCTTGTGTTTTCAGGTGGATAACCAACCGG
TAGAAGGAAATGTTGGGTGTTTTT-TTCC----TTTTCCACTCAAATGTTTGTCCATTTTTGTTGCTTTTCTAGTATTTC
TTTTTTGCATAAAAGATTATTTTTTAACAATACAAAAATATTTTTGAAGGAAATGATAAGAACAAAAGTGGGAGAAAGCA
ATAAGCATGAAGAGAAAGAACATTAGCGAAGCGATCGAGAAAAAACAAATGGGCTGATTCCATGCCCACTAAGTAGAGAT
CACATGTAAAACTAGCCAAGAAAACTAACTATTCAACGTAAGTTAC-GTTAGCTGAATGACTTAACAAAAGTGTTAGTCA
CCTGAGGTGTGGATGCACACTATTATTTTTCCGGTGCCCTTTTCCTTCATAATCATATTCCTCTTCACCTCTTTTCCTGA
TGGCGTCCTTTATGGATCAACATGGAGTATTATGTATAGAGAAAAGTATATTTTTCGTCCCTCAAGTTTCCAAAAAGTAC
AAAATTGGTCCCTCAAGATTTTTTGGTATACATTTGGTCCTTCAAGTCTCAAACCCAGCTAAGTTTAGTCCAAAACCAGA
TTTTGACCAGGTTTGACCGCCCAGACTTTGACCGGGTTTGACCGGCTGAACAGTAAATTCAAAAAAATATATTCAAAAAC
AGTTCAAAAAATATGTTTTTTTTCATGCAATATGCTTACATGCGTAAGGTGCGTGCCAAATTTCCTGGTCTTTCGGCACT
CGAGGCGCCTGTGGGAAAAAACAACAAATATACTCCTGATGAACAGTAAATTCGAAAAAATTTGCAAAAAATAAACAAAG
TCTGAATTTTTTGGGGGTTCAATATACTGGGGTGCGCAAGGCGGGTGCAATTTTTTGGCAACTTTGGACATTCAAGGGGC
TCATGGCAAAAAAACAAATTTTCGCTCATGAAAAATAGCCAAAAACTGTTGTTTTTGGCATGAGCTCCTCGAATGTTGAA
AGATGCCAAAAATTTGTATGGGACTTGTGCACCCCAGTATATTGCTATATTTTTCGAATTTACTGTTCATAGGGAGTAGA
TTTTTGTTTTTTGCTATGGGCGCCTCGAGTGTCTCAAGTCCAGGAAATTTGGCACGCACCTTGCGCATGTAAGCATATTG
CATGACAAAAAAATTCAGTTTTTTTGAACTATTTTTTATTTTTTTCGAATTTATTGTTCATAGGTCAAACCCGG-CAAAG
TCTGGGCGGTCAAACCCGGTCAAAATCTGGTTTTGGACTAAACATAGCTGGTTTTGAGACTTGAAGGACCAAATGTATAC
CAAAAAATCTTGAGGGACCAAGTCTCTACTTTTTGGGAACTTGAGGGACGAAAAACATACTTTTCTCTTATGTATATATA
GTATTAATATCAACTTTTTTATGTACATGTAGTACTTCCTCCGTTTTTATTTAGTCCACGTATTAGATTTGGTCAAAATC
AACCTTTATAAATTTTAACAAATTTTGTAAAAAAATATTAACACATAAAATAACAAATCAATGCAATTAGATTTATTATT
GAATGCACTTTCACATCATATATATTTATTATGATAAATGTTTATTGTTTTTCATAAACATGATCAAATTTTACATAGTT
TGACTTAAGTGAACTCTAATATGCAGAGTAAATAAAAACAGAGAGAGTAGTAGTCAAGTACACCGTCAGAAATTCACTTA
ATCCCATGGCCGGTCAATGTGGGAGTGCGCACATGTCTTAGTCTCTTGTACTCCCTCCTTTTCTTTTTAGTCTGCATATA
TGATTTGGTCAAAGTCAAAATTGTTAACATCTCAGATACTAAAGTTTTATGTTATGCAAATTAATTTCATTATGCATCTA
ATATAAATGATTTCATTGTGTGGATGTTGATATCTTTTCCTACAAAGCTAGTCAAATTTTATAAAGTTTGTCTTTGACCA
AATCTTATATGCAAACTAAAAAGAAACAGAGGAAGTATTAATCTGTTGTGCACACGCCATGGATGTATGCTTGTTTTGTC
CATGGGCCCAACCAAACAGCCAACCATCTTATAAATGCATTAACACCCATCAATCCTTTCCAACATCCACCAATAAACCA
AATATATGCATTTATACTTCAGATTATGAATGGGATCCCATGTTGGTGAGAAGCCCTATTTAAGCCCATGCACCCCCCTA
CGAAACTCCTCGCAGCATCCCTGTCTCCAGCCGACTACTATTGCTAGTTAGATCAAGATGGTCCGTGCTGCAGTTGCTCA
GCTTATGCTGGTCGCCCTAGTGGCCGCTATGCTCCTCGTAGCCACCGACGCGGCCATCTCCTGTGGACAGATGAGCTCTG
CCTTGAGCCCCTGCATCTCCTCTGCCCGCGGCAATGGCGCCAACCCGCCTGCGGCCTGCTGAAGCGGCATCAGGAGTCTG
GCCGGCGCAGCGAGGAGCACCGCTGACAAGCAAGCGGCGTGCAAGTGCATCAAGAGCGCTGCGGGTCGGCTCAACGTTGG
CAAGGCCGCTGGCATTCCCTCCAAGTGTGGCGTCAGCATCCCCTACGCCATCAGCTCTTCTGTCGACTGCTCTAACATTC
GCTGATCAACCACGGGCCACCATGTTTGCCGCTAATAGCTCCATCC-----------------ATCGACGGTGAGTACGT
TGAGGT--------CACAAACACACACACACGAATTAAA------------TCTCGTATTATCTCCATGTGTGTGTGTAA
GAGAGAGTGTGTACGTACGTCGAGCAAGCTCAGCATGGCCCAC--CACTGTTGTATCGATGTTTGGTTGTTCCTACACTA
CATCCGAGGAGATACATGAGTTTGTCATACTTTTTACCATGTGCACTTTTGATATATTGATGAGAT----------TCGG
CTCTACTCTCTACTCACGCACGTCGTTATTGCAC-----ATGTATGA--------CTGGGAAAGCATTCCATTCAAGTAG
C-TGCTCCTGGGAAAACATAGGAATGGAAATAAACCAATTCTTTAGAATGGAACCATGACATTCCACTCATTT-GGTCTC
TCTAATAAACACACCCTAAAACCGTGAGAGATGACAAAGAAATTTAGTTAATGTAACCACCTATGAAAACACGTGCTGGT
TTTTATTTAAGAAATCTTATTAGTAGCGGTATATTTCTAAAAAAGAGTCCCCCACGGAATAAGATCCTCCTGTCAAATGG
AAACAACTTGAGGTCTCTAGGTCTGCTCAAATTGCCATCTTCCAGTTCGCCACAAAATACTTCTAGATAGATTTAGCTAA
TTTTCAAACCGTGCACACGTGAGTTCATTGTGCAAGATGGTATTTAATTAAGCACCAATTGTTAGTGACTACACGAACGA
AAATTTGGAATACTCATGATTGTGATGCTAATTGGTAAGTACATTATACACTATGTTTTCTACAAATGGATCGGATAGTA
TGAAATGGTCATAGCATCTACAACTCGATACCCGAT--------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr3B_212
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TTATTTCGACGGGATCTAATTATAAAGAC
CCATAGGATCAAACATTCATGATCATATTGTTTACGGTTTTGCTAATTCTCAGTTGAGCGAGAAACTAAGTCTCAGTCGA
TTCCATTATTATCGGACATTTTGGTTTATTTCTTTATTGAGGGCTTCCTGCATGCCAGCTGCAACCCACTTCATTCGGCC
ACTCTCTTGGGTCTTGCTGACTGCTGGGCCAAGACCTAGAGATGGACTTTCCTTGTGTTTTCAGGTGGATAACCAACCGG
TAGAAGGAAATGTTGGGTGTTTTT-TTCC----TTTTCCACTCAAATGTTTGTCCATTTTTGTTGCTTTTCTAGTATTTC
TTTTTTGCATAAAAGATTATTTTTTAACAATACAAAAATATTTTTGAAGGAAATGATAAGAACAAAAGTGGGAGAAAGCA
ATAAGCATGAAGAGAAAGAACATTAGCGAAGCGATCGAGAAAAAACAAATGGGCTGATTCCATGCCCACTAAGTAGAGAT
CACATGTAAAACTAGCCAAGAAAACTAACTATTCAACGTAAGTTAC-GTTAGCTGAATGACTTAACAAAAGTGTTAGTCA
CCTGAGGTGTGGATGCACACTATTATTTTTCCGGTGCCCTTTTGCTTCATAATCATATTCCTCTTCACCTCTTTTCCTGA
TGGCGTCCTTTATGGATCAACATGGAGTATTATGTATAGAGAAAAGTATGTTTTTCGTCCCTCAAGTTTCCAAAAAGTAC
AAAATTGGTCCCTCAAGATTTTTTGGTATACATTTGGTCCTTCAAGTCTCAAACCCAGCTAAGTTTAGTCCAAAACCAGA
TTTTGACCAGGTTTGACCGCCCAGACTTTGACCGGGTTTGACCGGCTGAACAGTAAATTCAAAAAAATATATTCAAAAAC
AGTTCAAAAAATCTGTTTTTTTTCATGCAATATGCTTACATGCGTAAGGTGCGTGCCAAATTTCCTGGTCTTTCGGCACT
CGAGGCGCCTGTGGGAAAAAACAACAAATATACTCCTGATGAACAGTAAATTCGAAAAAATTTGCAAAAAATAAACAAAG
TCTGAATTTTTTGGGGGTTCAATATACTGGGGTGCGCAAGGCGGGTGCAATTTTTTGGCAACTTTGGACATTCAAGGGGC
TCATGGCAAAAAAACAAATTTTCGCTCATGAAAAATAGCCAAAAACTGTTATTTTTGGCATGAGCTCCTCGAATGTTGAA
AGATGCCAAAAATTTGTATGGGACTTGTGCACCCCAGTATATTGCTATATTTTTCGAATTTACTGTTCATAGGGAGTAGA
TTTTTGTTTTTTGCTATGGGCGCCTCGAGTGTCTCAAGTCCAGGAAATTTGGCACGCACCTTGCGCATGTAAGCATATTG
CATGACAAAAAAATTCAGTTTTTTTGAACTATTTTTTATTTTTTTCGAATTTATTGTTCATAGGTCAAACCCGGTCAAAG
TCTGGGCGGTCAAACCCGGTCAAAATCTGGTTTTGGACTAAACATAGCTGGTTTTGAGACTTGAAGGACCAAATGTATAC
CAAAAAATCTTGAGGGACCAAGTCTCTACTTTTTGGGAACTTGAGGGACGAAAAACATACTTTTCTCTTATGTATATATA
GTATTAATATCAACTTTTTTATGTACATGTAGTACTTCCTCCGTTTTTATTTAGTCCACGTATTAGATTTGGTCAAAATC
AACCTTTATAAATTTTAACAAATTTTGTAAAAAAATATTAACACATAAAATAACAAATCAATGCAATTAGATTTATTATT
GAGTGCACTTTCACATCATATATATTTATTATGATAAATGTTTATTGTTTTTCATAAACATGATCAAATTTTACATAGTT
TGACTTAAGTGAACTCTAATATGCAGAGTAAATAAAAACAGAGAGAGTAGTAGTCAAGTACACCGTCGGAAATTCACTTC
ATCCCATGGCCGGTCAATGTGGGAGTGCGCACATGTCTTAGTCTCTTGTACTCCCTCCTTTTCTTTTTAGTCTGCATATA
TGATTTGGTCAAAGTCAAAATTGTTAACATCTCAGATACTAAAGTTTTATGTTATGCAAATTAATTTCATTATGCATCTA
ATATAAATGATTTCATTGTGTGGATGTTGATATCTTTTCCTACAAAGCTAGTCAAATTTTATAAAGTTTGTCTTTGACTA
AATCTTATATGTAAACTAAAAAGAAACAGAGGAAGTATTAATCTGTTGTGCACACGCCATGGATGTATGCTTGTTTTGTC
CATGGGCCCAACCAAACAGCCAACCATCTTATAAATGCATTAACACCCATCAATCCTTTCCAACATCCACCAATAAACCA
AATATATGCATTTATACTTCAGATTATGAATGGGATCCCATGTTGGTGAGAAGCCCTATTTAAGCCCATGCACCCCCCTA
CGAAACTCCTCGCATCATCCCTGTCTCCAGCCGACTACTATTGCTAGTTAGATCAAGATGGTCCGTGCTGCAGTTGCTCA
GCTTATGCTGGTCGCCCTAGTGGCCGCTATGCTCCTCGTAGCCACCGACGCGGCCATCTCCTGTGGACAGATGAGCTCTA
CCTTGAGCCCCTGCATCTCCTCTGCCCGCGGCAATGGCGCCAACCCGCCTGCGGCCTGCTGAAGCGGCATCAGGAGTCTG
GCCAGCGCAGCGAGGAGCACCGCTGACAAGCAAGCGGCGTGCAAGTGCATCAAGAGCGCTGCGGGTCGGCTCAACGTTGG
CAAGGCCGCTGGCATTCCCTCCAAGTGTGGCGTCAGCATCCCCTACGCCATCAGCTCTTCTGTCGACTGCTCTAACATTC
GCTGATCAACCACGGGCCACCATGTTTGCCGCTAATAGCTCCATCC-----------------ATCGACGGTGAGTACGT
TGAGGT--------CACAAACACACACACACGAATTAAA------------TCTCGTATTATCTCCATGTGTGTGTGTAA
GAGAGAGTGTGTACGTACGTCGAGCAAGCTCAGCATGGCCCAC--CACTGTTGTATCGATGTTTGGTTGTTCCTACACTA
CATCCGAGGAGATACATGAGTTTGTCATACTTTTTACCATGTGCACTTTTGATATATTGATGAGAT----------TCGG
CTCTACTCTCTACTCACGCACGTCGTTATTGCAC-----ATGTATGA--------CTGGGAAAGCATTCCATTCAAGTAG
C-TGCTCCTGGGAAAACATAGGAATGGAAATAAACCAATTCTTTAGAATGGAACCATGACATTCCACTCATTT-GGTCTC
TCTAATAAACACACCCTAAAACCGTGAGAGATGACAAAGAAATTTAGTTAATGTAACCACCTATGAAAACACGTGCTGGT
TTTTATTTAAGAAATCTTATTAGTAGCGGTATATTTCTAAAAAAGAGTCCCCCACGGAATAAGATCCTCCTGTCAAATGG
AAACAACTTGAGGTCTCTAGGTCTGCTCAAATTGCCATCTTCCAGTTCGCCACAAAATACTTCTAGATAGATTTAGCTAA
TTTTCAAACCGTGCACACGTGAGTTCATTGTGCAAGATGGTATTTAATTAAGCACCAATTGTTAGTGACTACACGAACGA
AAATTTGGAATACTCATGATTGTGATGCTAATTGGTAAGTACATTATACACTATGTTTTCTACAAATGGATCGGATAGTA
TGAAATGGTCATAGCATCTACAACTCGATACCCGAT--------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chrUn_1032
TCAC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------AGCCACAGACGCTGCAATCTCCTGTGGCCAGGTGAGCTCTG
CCTTGAGCCCCTGCATCTCCTATGCACGCGGCAGCGGCTCCAGCCCACCTGCGGCCTGCTGCAGTGGTGTCAGGAGTCTG
GCCGGCGCAGCGCGGAGCACCGCTGACAAGCAAGCGGCGTGCAAGTGCATTAAGAGTGCTGCTGGTGGGCTCAATGCTGG
AAAGGCCGCTGGCATCCCCTCCAAGTGCGGCGTCAGCATCCCCTACGCCATTAGCTCATCCGTGGACTGCTCTAAGATTC
GCTGATCAACCACTGGCCACCATGGTCGCCGCCTATAGTGCCATCC-----------------ATCGACACTAACTATGT
TCGGGTCACACA----CACACACACACACACACAGATATACGAATAAATGCTGTTCA----------------TGTGAGA
CAGAGAG-GAGTATGTATGTCGAGCCAGTTCTGCATGGCCGGTCACACTATTGTATCGATGTTTGGTTGTTACTTCTCTC
CCGTTGAGGAGATACATGTGGTTGTTGTACTTTGTACCATGTGCACTTCTGATTTATGGAT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chrUn_1032
TCAC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AGCCACAGACGCTGCAATCTCCTGTGGCCAGGTGAGCTCTG
CCTTGAGCCCCTGCATCTCCTATGCACGCGGCAGCGGCTCCAGCCCACCTGCGGCCTGCTGCAGTGGTGTCAGGAGTCTG
GCCGGCGCAGCGCGGAGCACCGCTGACAAGCAAGCGGCGTGCAAGTGCATTAAGAGTGCTGCTGGTGGGCTCAACGCTGG
AAAGGCCGCAGGCATCCCCTCCAAGTGCGGCGTCAGCATCCCCTACGCCATTAGCTCATCCGTGGACTGCTCTAAGATTC
GCTGATCAACCACTGGCCACCATGGTCGCCGCCTATAGTGCCATCC-----------------ATCGACACTAACTATGT
TCGGGTCACACA----CACACACACATACACACATATATACGAATAAATGCTGTTCA----------------TGTGAGA
CAGAGAG-GAGTATGTATGTCGAGCCAGTTCTGCATGGCCGGTCACACTATTGTATCGATGTTTGGTTGTTACTTCTCTC
CCATTGAGGAGATACATGAGGTTGTTGTACTTTGTACCATGTGCACTTCTGATTTATGGAT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chrUn_1032
TCAC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AGCCACAGACGCTGCAATCTCCTGTGGCCAGGTGAGCTCTG
CCTTGAGCCCCTGCATCTCCTATGCACGCGGCAGCGGCTCCAGCCCACCTGCGGCCTGCTGCAGTGGTGTCAGGAGTCTG
GCCGGCGCAGCGCGGAGCACCGCTGACAAGCAAGCGGCGTGCAAGTGCATTAAGAGTGCTGCTGGTGGGCTCAACGCTGG
AAAGGCCGCTGGCATCCCCTCCAAGTGCGGCGTCAGCATCCCCTACGCCATTAGCTCATCCGTGGACTGCTCTAAGATTC
GCTGATCAACCACTGGCCACCATGGTCGCCGCCTATAGTGCCATCC-----------------ATCGACACTAACTATGT
TCGGGTCACACACACACACACACACACACACACATATATACGAATAAATGCTGTTCA----------------TGTGAGA
CAGAGAG-GAGTATGTATGTCGAGCCAGTTCTGCATGGCCGGTCACACTATTGTATCGATGTTTGGTTGTTACTTCTCTC
CCGTTGAGGAGATACATGAGGTTGTTGTACTTTGTACCATGTGCACTTCTGATTTATGGAT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chrUn_1032
TCAC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AGCCACAGACGCTGCAATCTCCTGTGGCCAGGTGAGCTCTG
CCTTGAGCCCCTGCATCTCCTATGCACGCGGCAGCGGCTCCAGCCCACCTGCGGCCTGCTGCAGTGGTGTCAGGAGTCTG
GCCGGCGCAGCGCGGAGCACCGCTGACAAGCAAGCGGCGTGCAAGTGCATTAAGAGTGCTGCTGGTGGGCTCAACGCTGG
AAAGGCCGCTGGCATCCCCTCCAAGTGCGGCGTCAGCATCCCCTACGCCATTAGCTCATCCGTGGACTGCTCTAAGATTC
GCTGATCAACCACTGGCCACCATGGTCGCCGCCTATAGTGCCATCC-----------------ATCGACACTAACTATGT
TCGGGTCACACA--CACACACACACACACACATATATATACGAATAAATGCTGTTCA----------------TGTGAGA
CAGAGAG-GAGTATGTATGTCGAGCCAGTTCTGCATGGCCGGTCACACTATTGTATCGATGTTTGGTTGTTACTTCTCTC
CCGTTGAGGAGATACATGAGGTTGTTGTACTTTGTACCATGTGCACTTCTGATTTATGGAT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr3B_1039
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------CACGGAGGCGGCTGTATCGTGCGGTCAGGTGAGCTCTG
CCTTGAGCCCCTGCATCTCCTATGCACGCGGCAACGGCGCCAGCCCGTCTGCGGCCTGCTGCAGCGGCGTTAGGAGTCTA
GCCAGCTCAGCCCGGAGCACCGCTGACAAGCAAGCGGCGTGCAAGTGTATCAAGAGCGCTGCTGCTGGGCTCAACGCTGG
CAAGGCCGCCGGCATCCCCACAAAGTGCGGCGTTAGCGTCCCCTACGCCATCAGCTCTTCGGTCGACTGCTCTAAGATTC
GCTGATCGAGCACTTGCTGCCATCGTTGTTGCTATCGTACGTCCCCTACGCCATCGTTGCTGGATCTACGCTTAGTACGT
TGAGGT--------CACACACACGCACACACACATATATATGAATAAATGCTCTCATATTATCTCAC----TGCGTGAGA
GAGAGAG-GAGTACGTCCGTCCAAGCAGCTATGCATGGCCGGCCACACTGTTGTATCGATGTTTGGTTGTTCCTCCACTC
CCC--------------GAGTTTGCTGTACTTTGTACCATGTGTACTTTTGATATATGGATTGTATACACAGCTGATCAG
CTCTACTTGCGTGTGCATGTTATCCAGCACTTTTGATATATGCAAGA--------CTGGCAAAGCATTCCATTCCAGTTT
GTTGCTCCAAGCAAGACGTAGGAATGAACCCAACAATTTACTAG-GAATGGAACTATGACATTTCACTCATTTTGGTTCC
TCAACAAAACACAACCTAAAACTGTTTGAGAACACACAGAATTCTAGTGAATGCAACCACC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>SNPs
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------S---
------------------------S----S--------------------------------------------------
--------------S-----------------------------------------------------------------
----------------------------------------------------------------S---------------
--------S------S----S---S--------------------S----------------------------------
-------------------------------------S---------------S--------------------------
----------------------------S---------------------------------------------------
--------S-----------------------------S-----------------------S-----------------
-------------------------S------------S-------------S---------------------------
------------------S----------S----------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S----------------------S--------S---------------------
-SS-SSS----SS-S-----------------------------------------------------------------
--------------------------------------S--SS-SSS--------SSS----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------SS----------S----S------------------------S--------------------
--S-----------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
----------S-----S---------------------------------------------------S-----------
------------------------------------------------S----S--------------------------
-------S---S-------------------------------------------------------------------S
S-----------------S----------S--------------------------------------------------
--------------------S--------------------------SSSSSSSS-----------S------------S
------S---------S---------------------------------------------------------------
---------------------------------S----------------------------------------------
--S----------------S-------------------S-----------------------------S----------
----------------S----------------S------------------------------S---------------
----------S--S------S-----------------S---------------------S-------S----SS-----
--------S----------------------------------S------------------------------------
-------S---S-------------S--S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_87
-------------------------------------------------------------------ACGACTACATCAA
CCGCGTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>reverse_3410
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GGGAGTCTGGGAAAGCACTC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
