>input_sequence_83805
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---------------------------------A-----T-----GAGCGCGATTTTGGCATGCCGAGATGGGAGCAGTT
CAAGGAGGCTTGCCATGTTCAATTTGGGCCGTCACTTCGCGCAAATCCCTAGGGCAAGTTGG--CGTCTGTCGTTCACTT
CCTTGGTTGCAGACTACACCATCAGGTTTCTAGCGCTCATGTGCC---ACAATAATGAGCCATTAACACCGTTCCAACGA
CGG-TTTCTGTACATAGCAGGGC------TGCCTGATGGTCTTCGCATCGACGTCGAGCTTCAACGACCATCTGACTTCT
ACACCGCCATCTCCTTCGCCAAGGCCTATGAGCAGCAGCATTTCCCTCCAACAGCGTGA---------------------
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-------------------------------------------------------------------------
>chr5A_1_TraesCS5A01G183000
TGAGCCAACCATAAATCTTGGAACCTTGGGGTGGTAGAGAGTCCAAGTTGGACCCAAATCTGAGCTGTATGCGGGCAGCC
AATGAACAGGTGGCCTGTGTCTTCAGAGGGGCCAGCACATCGTGGGCAGGAGGCGGTATCCGACATGTGCTTGTAAGCCA
GGTTTGCATGGGTGTTGAGGCGCCCGCGAAACAACAGCCAAGCAAACAGTTTGATGATCTTGTCCGGGGCTCGGGACCTC
CAGATTAAATCAGCGTGGTCATCCTCGAGATCTTCATGTAGCATAATCTTATAAGCAGGCTTTGGAGAGTACTTCAGTCC
ATGGAGCAAGAACCGCTCGTCCTGTCCATCCGTGAGTTGGATCTCCTGGATTTCTACCTCTCTTTGTTGTTGCGGGACTT
CCAACTCATGGATGGACAGGTAGGCGGCGAAGGCGGCAAAGTGCCCCTCACTTTCCCGCCTTCG-CC----GCCTACCTG
CCATCGCACCACAACCATGTGCC--GATTCCTGCCAACCACCACTAGCCGCCATCCCCCTTTTACTACCTCCAGCCATCT
CCTTACTCGCTGCAGCTACTCCCTAACAACAATCTGGGCCACTTCTCACACCCACATTACTACTCAAATCCCACCCCAAA
TCCCTTCCAATTTTGCCATCCACCTAC-----CATCAGCAATAGCCGCAGATCGTC------------------------
----------ACCGCCTT--------------------------------------------------------------
----------------------------------CACGCCTCCACATGCCAACCGATTTCATACGTCGTTATGGCAGCCT
TCACAGACCACAGCGCATCTATGGATCCACCCTACCCATCACCTCCCTTCTGCACCT---------GCCTAACCATCACC
TCGGCTCAGGTTTGGGTTCCGGCGTGCCCCGCTTCCACAAGCTCGACTTCCCAACATATGATGGCTTGGTCGATCCTCTT
GGTTGGCTCAATAGGTGCGAGCCAGTTTTTTCGTGGACAACACATAGACGAGGCAAACAACATCTGGACTGCGGCC-TAC
AACCTCACC-AATGACTCTCAACTCTAGTACTTA-----T-----GAGCGCGATTTTGGCATGCCGAGATGGGAGCAGTT
CAAGGAGGCTTGCCATGTTCAATTTGGGCCGTCACTTCGCGCAAATCCCTAGGGCAAGTTGG--CGTCTGTCGTTCACTT
CCTTGGTTGCAGACTACACCATCAGGTTTCTAGCGCTCATGTGCC---ACAATAATGAGCCATTAACACCGTTCCAACGA
CGG-TTTCTGTACATAGCAGGGC------TGCCTGATGGTCTTCGCATCGACGTCGAGCTTCAACGACCATCTGACTTCT
ACACCGCCATCTCCTTCGCCAAGGCCTATGAGCAGCAGCATTTCCCTCCAACAGCGTGACCACACCAGCCTTCTGGGCCT
ACAGTGTCCCTGTGCCTCTCCGATTCTCCTGTTGCCAAGGCAGCTACAATACCTTCCCTGCCAGGGCCACTAGCACCTAT
TCTGTAGTCGATTACTCCATAGCCAACCCCGGCACAACAGGTTTGGCATCTCACTCCAGCTGGGTT-GGCAGAACGTCGT
TGCCAGGACCTTTGCTTCAACTGCAACGAGATTTATGTTTGTGGTCACCGGTGCGCGCAGCACTTCTTCATCGAGACTGA
CGACTACAACCAAGGTAGCTCCACAACTGGTAGCCCCTCTCAATGAAGCAGAGAAGAATATCATCA-TTTACTTTTATCT
ACTTTTCATTAGTTAGGGTTATGTCAGTAGTAGATCCTTCTATCATCTACGTCTGACCATTCGAGAAGGTTTTCTTAGTG
TTTAGTTTCTCTTGTAATGATACATA-TTTTTTACCTGTTCGAGCTTTCTCCACGAAGGGGAAGTGGTCGTAACATCGTA
TGTGATAATAATATTGTGGGACAC--TACACCATTCTGTTCCCCGCTCATTCTTTATCACGATTGTTCTCTTCACATTTT
TTCCCATGCGCTGCTGTGGGTTTTTCATGTTATAGTTTGGAGTTTTGTATCTATCTTCTGAATCTTGATACTATATGCAA
GGCTGTTTTTAACTTTTTATTACCTATCAAATTAACCTTACGTCCACATTTTCTCTTTGTTTTGCTTGTCTGGCAATATT
TTGCAATATGCAGCTCTATCCAGTAACCTCATCTTACGGCATGCCTGTGTATTTCTCTCTGGAACGTGCTGCTGCTCCCT
ACTTTGGTATAAAGGTCTG-------------------------------------------------------------
-------------------------------------------------------------------GTATTCTGCACCT
CTAAAGTTACCCATCATCGATCCTCTCGTCTATGCTATAAGTTTCCTGATTCTTATTAGCTATGTACCTAAGCAGCCTTC
TCTTTTATCTTTAAG-TTTAAGATCCTCATGGCAGGCTTATGGTGTTCATATGAATGGGTACATTGAGAAGCG
>chr5A_444
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CCCCTCACTTTCCTGCCTTCCACTTAGAGTCTACTTC
CCCTTGCAACATAACCCTGTGCCCTGACCACTGCCAACCACCATCAGCCGCCAACGCCCTTTTACCACCTCCAGACATCT
CCTTACTCAGCACAGCCACCTCCTAGAATCAATCTGGGCCACTTGGCACCCTCACCCTACAGCCCAAATCTCAGC-----
------CCAATATTGCCGCCCACCTAC-----CAGCAGCA---GCCGCAGATTTTTGCTGCCGCA---------------
-------TCTA-CCCCTT--------------------------------------------------------------
----------------------------------CACGCCTCCACCTGCCAATCGATTTCATATGCCGTTATGGCCGCAC
-CCCCCTCCAGAACCCATCTATGAATCCACCCCGCCCATTACCTCCCTTCCGCCCCT---------ACCTAACAATCACC
TCGGATCAGCTTCTGGTTCAGGCGTGCGTCGCTTCCACAAGCTCGACCTCCCGATGTATGATTGTTTGCCTGATCCTCTT
GGTTGGCTCAATAGGTGCGAGCGGTTTTT-TCGTGGACAGCGCATGGAC------GACAAGGTCTGGACTGCAGCCTTAC
CACCTCACC-AATGAAGCTCAGTTCTGGTACTTA-----CAACTTGAGCGTGATTTCAGCATGCCGACATGGGAGCAGTT
CAAGGAAGCTTGCCACGTTCAGTTTGGGCCGTCACTCCGCACCAATCCCTTGGACGAGTTGGCACGTCTGCCGCTCAATT
CCTAGGTTGCCGACTACACCAGCAGGTTTCTAGCGCTCATGTGCC---ACAACAATGAGCCATTAACACCGTCCCAACAA
CGG-TT-ATGTACACAGCAGGGC------TGCCCGATGGTCTTCGCACTGACGCCGAGCTTCAGCAGCCGTCTGACTTCC
ACACCGACATCTCCTTCGCCAAGGCCTATGAGCAGCGGCGTTTCCCTCCAATA---TCATCACACCAGCCTTCTCATCCT
ACAGAGCCCTTGTGCCCCTCCGAT--------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr5B_448
--------------------------------------------------------------------------------
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-----------------------------------------------TCACTTTCCCGCCTTCG-CC----GCCTACCTG
CCGTCGCAACACAACCATGTGAC--GACTCCTGCCAACCATCACCAGCCGCCATCCCCCTTTTACCACCTCCAGCCATCT
CCTTACTTGCCGCAGTTACTCCCTAACATCAATCTGGGCCAGTTCGTAC-----------AGCTCAAATCCCACCTCAAA
TCCCTT-------------------AC-----CATCAGCAACAGCCGCAGATCGTC------------------------
----------ACCGCCTT--------------------------------------------------------------
----------------------------------CACGCCTCCACATGCCAACCAATTTCATACGTTGTTATGGCAGCAC
TGCCTTTACAG---CCCTTTATGGATCCACCCCGCCCATCACCTCCCTTCTGCCGCT---------GCCTAACCATCACC
TCGGCTCAGGCTTGGGTTCCGGCATGCCCCTCTTCCACAAGCTCAACTTCCCAACATATGATGACTTGGTCGATCCTCTT
GGGTTGCTCAATAGGTGCGAGCAGCTTTT-TCGTGGACAGCGCACAGACCAGGCCGACAAGGTCTGGACTACGGG-TTAC
AACCTCACC-AATGACTCTCAGTTCTGGTACTTA-----C-----GAGCGTGATTTCAGCATGCCGACATGGGAGCAGTT
CAAGGAGGCTTGTCACGTTCAGTTTGGGCCATCACTTCGTGCTA--CCCTAGAGCGAGTTGGCGCGTCTGCCGTTCACTT
CCTTGGTCGCAGACTTCACCAGCAGGTTTCTAGCGCTCATGTGCC---ACAATAATGAGCCATTAATACCATTCCAACAA
CGG-TTTCTGTACCCAGCAGGGC------TGCCTGATGGTCTTCGCATTGACATCAAGCTTCAACGGCCATCTGACCTCT
ACACCGCCATCTCCTTCGCCAAGGCCTATGAGCAGAGGCATTTCCCTCCAACAATGTCACCACACCAGCCTTCTGGGC-T
ACAGGGCCTTTGTGGCCCTCCGATTCTCCTGTGGTCAACGCAGCTACAATACCTTTCCCACCAACACCACTAGCACCTAG
TCTGCAGTCGACCACTCCAGAGCCAACCCCTTCACAACAGGTTTGGAGTCTCACTCCAACTGGGTT-GGGAGAACGTCGT
CGCCGGGGCTTTTGCTTCAACTGCGACGAGATTTATGTTCGCGGTTACCGGTGCAGGCAGCACTTCTTCATCGAGGCTGA
CGACTACAACCAAGGTAGCTCCGCAACTGGTAGCCCCTCTCAATGGAGCAGAGAAGAATATTATCGTTTAACTTTTATGT
ACTTTTCATTAATTAGGGTTATGTCAGTAGTAGATCCTTCCGTCATCTACGTCTGACCATTCGAGAAGATTTTCTTAGTG
TTTAGTTTCTCTTGTAATGATACATA-TTTTTTACCCGTTCGAGCTTTCTCCACGAAGAAGATTTGGTCATAACATTGTA
GGCGATAGTAATATTGCGGGACAATGTAGACCATTCTATTCCCCACTCACTCTTTATCACGAGTGTTCTCTTTGCATATT
TCC-------CTGTTGTGGGTTTTTCATGTTATAGTTTGGAGTTTTATATCCATCTTCTGAATTCTGATACTATATGCAA
GGCTGTT-TGAACATTTTATTACCTATCAAATTAACCTTACTTCCACATTTTCTCTTTGTTTTGCTTGTCTGGCAATGTT
TTGCAATATGCAGCTCTATCCAGTAACCTCATCTTACGGCATGCCTGTGTACTTCTCTCTGGAACGTGCTGCTGCTCCCT
ACTTTGGTATAAAGGTCTGATATACTTGTGACACTTCCCTTTT-------------------------------------
---------------------------------------------TAATATATATGTTGCCCTTGTAGTATTATGCACCT
TTAAAGGTACTCATCATCGATCCTCTCGTCTATGCTATAAGTTTCCTGATTCTTATTAGTTATGTACCTAAGCAGCCTTC
TCT---ATCTTAAAG-TTTTAGATCCTCATGGCAGGTTTATGGTGTTCATATGAATGGGTACATCGAGAAGC-
>chr6B_448
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TCACTTTCCTGCTTTCCACC----TTCTACTTC
CCCTTGCAACACAACC-TGTGGC--AATCGCTGCCAACCACC-TCAGCCGTCAACACCCTTTTACCACCTCCAACCATCT
CCTTACTTACCACAGCCACCCCCTAACATCAATCTGGGCCACTTGGCACTCCCACTCTGCAGCCCAAATCCCACA-----
------CCAATTTTTCA-CCCACCTATCAGCGCAGAAGCA---ACCCAACCATCA-GCAGCAGCAGCCGCAGATTTTCGC
CGCCGCCTCTACCACCTT--------------------------------------------------------------
----------------------------------CACGCCTCCACCTGCCAACCGATTTCATACGCCATTATGGCCATGC
-CCCCCTCCACAACCCATCTATGGATCCACCC-GCCCTTCACCTCCCTTCTAACCCT---------GCCTAACCATCACC
TCGGCTCTGATTCGGGTTCCGCCGTGCCCCGCTTCCACAACCTTGAATTCCCAATATATGATGGCTTGGTCGATCCTCTT
GGTTGGCTCAATAGGTGCGAGCAGTTTTAT--GTGGACAGCGC------------------------ACTGCAGCC-TAC
CACCTCACCAAATGACGCTTAATTCTGGTACTTA-----CAGCTCAA-GGCAATTTCGGCATGCCGACATGGGAGTGGTC
CAAGGAGGCTTGCCACGTTCAATTTGTGCCGTCACTTCACGCAAATGCCTTGGGTGTGTTTGTGCGTCTGCTGTTCACTT
CCTCGGTCACAGACTACACTAGCAGGTTTCTAGCGCT-ATGTGTC---GCAACAATGAGCCATTAACACCGTCCCAACAA
CGG-TTTCTGTACACAACAGGGC------TGCCCGGTGGTCTTCGCATTGACGTCGAACTTCAACGGCCATCTGACCTCC
ACATCCCCATCTCCGTCGCCAAGGCCTATGAGCAGCGGCCTTACCCTCTAACAGCGTCATCACACCAGCCTTCTGGGCCT
ACAAGACCCTTCTGCCCCTCCGATCTTCCTGCAGTCAACACAGCTACAATACCTTTCCCGCCAGCACCACTAGCACATGT
TCTGTTGTGGACCACTCCAGAGCCAGCCCCGCCACGGCAGGTTCAGCACCTCACTCCAGTTGAGTT-AGCAGAACGCCGT
CCTCAAGGCCTTTGCTTCAACTGTGATGAGATTTATGTTCGGGGTCACCTGTGCGCGCAGCTTCTCTTCATCGAGGCTGA
TCACTACGACCAAGATAACTCCACAACTAGTA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr5B_504
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------CTGCCAACCACCATCAGCCGCCAACGCCCTTTTACCACCTCCAGCCATCT
CCTTACTCAGCACAGCCACCCCCTAACATCAATCTGGACCACTTGGCACCCTCACCCTATAGCCCAAATCCCACC-----
------CCAATTTTGCCGCCCACCTAC-----CAGCAGCA---GCCCCACCATCA-GCAGCCGCA---------------
-------TCTA-CGCCTT--------------------------------------------------------------
----------------------------------CACGCCTCCACCTGCCAATCAATTTCATATGCCGTTATGTACACAC
ACCCCGTCCACAACCCATTTATGAATCCACCCCACCCATTACCTCCCT-CTGCCCCT---------ACCTAACAATCACC
TCGGATCAGTTTCTGGTTCAGGCGTGCGTCGCTTCCACAAGCTCGACTTCCCAATGTACGATGGTTCAGTTGATCCTCTT
GGTTGGCTCAATAGGTGCGAGCGGTTTTT-TCGTGGACAGCGTACAGAC------CACAAGGTCCGGACTGCAGCC-TAC
CGCCTCACC-AATGACGCTCAGTTCTGGTACTTA-----CAACTTGAGCGTGATTTCAGCATGCCGACATGGGAGCAGTT
CAAGGAAGCTTGCCACATTCAGTTTGGGCCGTCACTCCGCGCCAATCCCTTGGGTGAGTTGGCACGTCTGCCGCTCAATT
CCTCGGTTGCCGACTACACCAGCAGGTTTCTAGCGCTCATGTGCC---ACAACAATGAGCCATTAACACCATCCCAACAA
CGG-TT-CTGTACACAACAGGGC------TGCCCGATGGTCTTCGCACTGACGTCGAGCTTCAGCAGCCATCTGACTTCC
ACACCGCCATCTCCTTCGCCAAGGCCTATGAGCAGCGGCATTTCCCTCCAACA---TCACCACACCAGCCTTCTCGTCCT
GCAGAGCTCTTGTGCCCCTCCGATCTTCCTTCGGTCAACGCAGCTACAATACCTTCCCCGCCTGCGCCACTAGCACCTGT
TATGCCATCAACCACTCCAGAGCTAACCCCGCCACGGCAGGTTAGGCGCCTCACTCCAGCTGAGTT-AGCAGAACGTCGT
CATCAGGGCCTTTGCTTCAACTGCGACAATATTTATGTTTGGGGTCACTGGTGAGCACGGCTCTTCTTCATCGAGGCTAA
TGGCTACGATCAAGATAGCTCCACATCTGGTAG-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr5D_504
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CTGCCAACCACCATCAGCCGCCAACGCCCTTTTACCACCTCCAGCCATCT
CCTTACTCAGCACAGCCACCCCCTAACATCAATCTGGACCACTTGGCACCCTCACCCTATAGCCCAAATCCCACC-----
------CCAATTTTGCCGCCCACCTAC-----CAGCAGCA---GCCCCACCATCA-GCAGCCGCA------GATTTTTGC
TGCCGCATCTA-CGCCTT--------------------------------------------------------------
----------------------------------CACGCCTCCACCTGCCAATCAATTTCATGTGCCGTTATGGCCACAC
ACACCCTCCACAACCCATTTATGAATCCACCCCACCCATTACCTCCCTTCCGCCCCT---------ACCTAACAATCACC
TCGGATCAGCTTCTGGTTCAGGCGTGCGTCGCTTCCACAAGCTCGACTTCCCGATGTATGATGGTTCGGTCGATCCTCTT
GGTTGGCTCAATAGGTGCAAGCGTTTTTT-TCGTGGACAGCGCACGGGC------GACAAGGTCTGGACTGCAGCC-TAC
CACCTCGCC-AATGACGCTCAGTTCTGGTACTTA-----CAACTTGAGCGCGATTTCAGCATGCCGACATGGGAGCAGTT
CAAGGAAGCTTGCCACATTCAGTTTGGGCCGTCACTCCGCGCCAATCCCTTGGGTGAGTTGGCACGTCTGCCGCTCAATT
CCTCAGTTGCCGACTACACCAGCAGGTTTCTAGTGCTCATGTGCC---ACAACAATGAGCCATTAACACCATCCCAACAA
CGG-TT-CTGTACACAACAGGGC------TGCCCGATGGTCTTCGCACTGACGTCGAGCTTCAGCAGCCATCTGACTTCC
ACACCACCATCTCCTTCGCCAAGGCCTATGAGCAGCGGCATTTCCCTCCAACA---TCACCACACCAGCCTTCTCGTCCT
ACAGAGCCCTTGTGCCCCTCCGATCTTCCTTCGGTCAACGCAGCTACAATACCTTCCCCGCCTGCGCCACTAGCACCTGT
TCTGCCATCAACCACTCCAGAGCTAACCCCGCCGCGGCAGGTTAGGCGCCTCACTCCAGCTGAGTT-AGCAGAACGTCGT
CGTCAGGGCCTTTGCTTCAACTGCGACAAGATTTACGTTCGGGGTCACCGGTGCGCGCGGCTCTTCTTCATCGAGGCTAA
TGACTACGATCAAGATAGCTCCACATCTGGCAG-----------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr7D_680
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------TCGTC------------------------
----------GCCGCCTC--------------------------------------------------------------
----------------------------------CATGTCTCCACCTGGCAACCAATTTTATACGCCGCTATGGCCGCGC
-CCC--TACACAACCAATCTATGGATCCACCCCGCCCATCACCTCCCTCCCAACCCCCCAACCCCCACCTAACAATCACC
TCAGCTCAGTTTTTGGTTCAGGCGTGCCTCGCTTGCACAAGCTCGACTTCCCAACTTACGATGGTTCGGTCGATCCTCTT
GGTTGGCTCCATAGATGCGAGCAGCTTTT-CCTCCGTGC-------------GCTGACAAGGTCTGCACTGCAACG-TAC
CACCTCACC-AATGATGCTCACTTCTAGTACTTAAAGCTC-----GAGCGCGATTTCGGCATGCCAACATGGGGGCAGTT
CAAGGAAGCTTGCCATGTTCAATTTTAGCCGTCACTCCGCGCCAATCCTTTGGGCGAATTGGCACGCCTGTTGTTCACTT
CCTCGATTGCCGACTACACCAGCAGGTTTCTAGCACTCATGTGCC---ACAACAATGAGTCGTTAACACCATCCCAACAA
TTGTTT-CTATACATAGCAGGGCTAGGGCTGCCCGATGGTCTTCGTGTTAACGTCGAGCTTCAGCAGCCATGTGACCTCC
AAACTGCCAACTCCTTCTCCAAGGCCTATGAGCAGCAGCATTTCCCACAAATAACGTCACCACACCAACCTTCTAGTCCA
ATAGGCCCCTTGTTACCCTCTGATCTTCTTGCGGTCAACGTAGCTAAAATACCTTCCCCGCCAGCGCCACTAGCACATGT
TCTGCCATCATCCACTCCAAAGCGAACCCCACCACGGCAGGTTCGGCACCTCACTCTAGCCGAGTT-AGCAGGACGTCAT
CTCCAAGGCATTTGCTTCAACTGCGACGAGATTTATGTTCGGGGTCACCAATGTGCGTGGCTCTTCTTCATCAAGGTTGA
TGACTATGACCAAGATAGCTCCACATATGCTAGCACCC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr2A_685
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------ACCGCCTT--------------------------------------------------------------
----------------------------------CATGCCTCCACCTGCCAACCGATTTC--GTGACGTTATGGCTGCAC
-CCCCCTCCACAACCCATCTATGGACCCACCTCGCCCATCACCTCCCTTCTGCCCCT---------ACTTAACAATCACC
TCGGATTAGGTTCTGGTTCAGGCGTGCCTTGCTTCCACAAGCTCGGCTTCGCGACATATGCTGGTTCGGTCAATCCTCTT
GGTTCGCTAAATAGGTGCGAGCAG-------------------------GAGGCTGACAAGGTCTGAGCTGCAGCC-TAC
CACCTCACC-AATGACACTCAGTTCTGGTACTTACATCTC-----GAGGGCGACTTTGGCATGCCAACATGGGAGCAGTT
CAAGGAAGCTTCCCATGTTTAGTTTGGGCCGTCACTTCGCGCCAATCCTTCGGGTGAGTTGGCACGTCTGCCGTTCACTT
CCTTGGTTGCCGACTACACCAGCAGGTTTCTATTGCTCATGTGCC---ACAACAATGAGCCATTAACACCGTCCCAACAA
CGGCTT-CTGTACACAGCAGGGC------TGCCTGATGGTCTTCACATTGACGTCGAGCTTCGGTGGCCATCTTACCAAC
ATACTGCCATCTCCTTCGCCAAGGCCTATGAGCAGAAGCATTTCTCGACAACAATGCCATCACACCAGCCCTCTGGTCCT
ACAGGGCCCTTGTGCCCCTCCAATCTTCCCGCGGCCAACGCAGCTACAATACCTTCCCCGCCAGCGCCACTACCACTTAT
TCTGTTGTCGACCATTCCAGAGCCAACCCCGCCACGGCAGGTTTGGCGCTTCACTCCAGCTGAGTT-AGAAGAACGTCGC
AGCCAAGGCCTTTTCTTCAACTGTGATGAGATTTATGTTCAGGGTCAGCGGTGTGCGCGACTCTTCTTCATCGAGGCTGA
TGACGACGACCAAGAAAGCTCCACATCTGGTAGCACCC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr7D_685
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------ACCGCCTT--------------------------------------------------------------
----------------------------------GACGCCTCCACCTGCCAAACGATTTCATATGCCGATATGACCGCT-
-CCCCCTCCACAACCCATCTA-GGATCCACCCCGCCCATCACCTCTCCTCCGCCCCT---------ACCTAACAATCACC
TCGGATCAGGTTCTGGTTCAGGCATGCCTTACTTCCACAAGCTCGACTTCCCAACGCATGATGGTTCGGTCGATCCTCTT
GGTTGGCTCAATAGGTATGAGCAGTTTTT-TCGTGGACATTGCACGGACGAGGCTGACAAAGTCTAGCCTGCAGCC-TAC
CACCTCTCC-AATGACACTTAGTTCTGGTACTTACAGCTC-----GAGCGCGATTTTGGCATGCCAAAACGGGAGCAGTT
CAAGGAAGCTTGCCGCGTTCAGTTTGGGCCGTCACTCCACACCAATCCCTTGGGCAAGTAGGCACAACTGCCATTCACTT
CCTCGA-----------------------CTAGTGCTCATGTGCC---ACAACAATGAGCCACTAACACTGTCCCAACAA
CGGTTT-CTGTGCACAGTAGGTC------TGCCCTATGGTCTTCGCATTGACATCAAGCTTCAGCTTCCATCTGACCTCC
ACACCGCCTTCTCCCTCGCCAAGGCCTATGAGCAGCAGCATTCCCTCCAA-CAACGTCACCGCACCAGCCTTCTGGTCCT
ACAGGGCACTTTTGCCCCTCCGATCTTCCTGCGGTCAATGCATCTACAATACCTTCCCCACCAGCGCCACTAGCACATGT
TTTGTCGTCAACCACTCCGGAGCCAACCCCGCCACGGTAGGTTCGGCGCCTCAATCCAGCAGAGTTTAGCAGAACGTAGT
CGCCAAGGCCTTTGCTTTATCTTTGACGAGATTTATGTTTGGGGTCACCGGTGCACGCGGCTCTTCTACA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr4D_685
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------ACCGCCTT--------------------------------------------------------------
----------------------------------CACATCTCG-CCTGCCAAAAGATTTCATACGCCGCTGTGGTTGCGC
-CCCC-TACACAACCTATCTATAGATCTACCTCGCCCACCACCCCCCTTCCAT-CCT---------GCCTAACAATCACC
TCGGTTCAGGTTCTGGTTCAGGTGTGCCTCGCTTCCACAAGCTCGACTTCCCGACGTATGATGGTTCGATCGATCCTCTT
GGCTGGCTCCATAGTTGTGAGCAGTTTTT-CCATGGATAACGCACGGCCGAGGTGGACAAGGTCTGGACTGCAGCA-TAC
CACCTCATG-AATGACACTCAATTCTGGTACTTACAACTC-----GAGTGCAACTTCGGCATGCCGACATGAGAGCGGTT
CAAGGAAGCTTGCCTTGTTCAGTTTGGGTTGTCACTCCGTGCCAACCCTTTGGGCGAGTTGGCACGTCTTCCATTCACTT
CCTCAGTTGCCGACTACACCAGCAGGTTTCTAGCGCCCATGTGCC---ACAA---TGAGCCGTTAACATCGTCCCAACAA
CGGTTG-TTGTACACAACATGTC------TGCCTGATGGTCTTTGTGTTGACATCGAGCTTCAGCGGTCATCTGACCTCC
ACACCGCCATCTCCTTCGCCAAGGCCTATGAGCAGTGACATTTCCCTCCGACAATGTCACCACACCAGCCTTCTGGTCCT
ACATGGCCCTTGTGCCACTCTGATCTTCCTGTCGTCGACACAACTACAATACCTTCTCCGCCAGTGTCACTAGCACATGT
TCTGCCATCAACCACTCTACAACCAACACTGCCACGGCAGGTTTGGCGCCTCGCTCCAGCAGAGTT-ACCAGAACGTCGT
CGCCAATGCCTTTGCTTCAATTGCGACATGATTTATGTTCGGG-TCAACGGTGCGTGCGACTCTTCTTCATCGAGGTTGA
TGACTATGACCAAGGT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr6B_688
CCCCTCTCAATGAAGCAGAGAAGAATATTGTCGTTTACTTTTATCTACTTTTCAGTAATTAGGATTAGCCTGGAAACAGC
CTCTTACATAAATGTAGGGAAGGCTGCGTACAATAGACCCAAAGTGGTCGGACCCTTCCCCGGACCCTGCGCAAGCGGGA
GCTACATGCACCGGGCTGCCCTTCAGTAATTAGGGTTAGTTCAGTAGTAGTTCTTCCAATTTGGTATCAGATCCATCTAC
AATGAGGGGCAAAGAAATCGAGATCGAGGCTGTGGAGCAGATGAAGATCATCACGAAGCAAGTGGAGGCCTTCGCACGTC
AACGAGAGGAGGACAAGACGCTCCTCGCCAGGCTGGTGCAGCGCTCGACGGCGCTCGAGCAGCGGCTGCCGGCCCTGCCC
CCACCTCCAGATTCCAAGGCTGCAGCAGCCGCCACCTCCGCGGGTCAGGCCCTCCTCCCCAACGACTACTCGCCCATCGT
ACTTCCCCTCGCCAACAGCACCTCTGGTGTCCCCTTTTCCAGCGAGGAAATCACCGTCGGCGGCAGACCTCCACCCGGCG
GGCAGATTGCCCACCCCCACCACCCCCTCACTTTTGCTGCCAACCACCCTCAGATCATTCCAGCACCCTTTTACCACCTC
CAGCCATCTCCTTACTCGCCACAGCCACCCCCTAATATCAATCTGGGCCACTTGGCACTCTCACCCTACAGCCCAAATCC
CACCCCAAACCCTACCCCAAATTTGCCACCCACCTACCAGCAGCCCCACCATCAGCAGCAGCCACCCTACCATCAGCGGC
AGCAGCAGATTTTTGCAGCCGCCTCTACTGCCTTCACATCTCCACCTGCCAACAGATTTCATACACCACTATGGCCTCGC
-CCCCCTACACAACCCATCTATGGATCCACCCCGCCCATCACCTCCCTTCCACCCCT---------GCCAAAAAATCACC
TCGGCTCAGGTTCTGGTTCAGGTGTGCCTCGCTTCCACAAGCTCGACTTCCCGAGGTATGATGGTTCGGCCAATCCTCTT
GGTTGGCTCCATAGGTGCGATCAGTTTTT-CCGTGGACAACGCACGGCCGAGGCTGACAATGTCTGGACTGCAGCG-TAC
CACCTCACA-AATGACGCTCAGTTCTGGTACTTGCAGCTC-----GAGAGCGAATTCCGCATGCCGGCATGGGAGCAGTT
CAAGGAAGCTTGCCATGTTCAGTTTGGGCTGTCACTCCGCGCCAACCCTTTGGGCGAGTTGGCACATCTGCCGTTCACTT
CCTCAGTTGCCGACTACACCAGCAGGTCTCTAGCACTCATGTGCCACAACAA---TGAGCCGTTAAAACCGTCCCAACAA
CGGTTT-CTGTACACAGCAGGGC------TGCCCGATGGTCTTCGTGTTGACGTCAAGCTTCAGCGGCCATCTGACCTCC
ACACCGCCATCTTCTTCCCCAAGGCCTATGAGCAGCGACATTTCCCTCCAACAACGTCACCACACCAGCCTTCTGGTCCT
ACAGAGCCCTTGTGCCCCTCAGCTCTTCCTGCTGTCAACGCAGTTACAATACCTTCCCTGCCAGTGTCACTAGCACCTGT
TCTGACATCAACCACTCCAGACCCAACCCCACCACAGCAGGTTCGTCGCCTCACTCCAGCAGAGTT-AGCAGAACGTCGT
CGCTAGGGCCTTTGCTTCAACTGCAACGAGATTTATGTTCAGCGTCACGGATGCGCGCGGCTCATCTTCATCGAGGCTGA
TGACTATGACCAAGGT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr2D_778
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CACCTCCCTTCTGCCCCT---------ACTTAACAATCACC
TCGGATTAGGTTCTGGTTCAGGCGTGCCTTGCTTCCACAAGCTCGGCTTCGCGACATATGCTGGTTCGGTCAATCCTCTT
GGTTCGCTAAATAGGTGCGAGCAG-------------------------GAAGCTGACAAGGTCTGAGCTGCAGCC-TAC
CACCTCACC-AGTGACACTCAGTTCTGGTACTTACAGCTC-----GAGGGCAATTTCGGCATGCCGACATGGGAGCAGTT
CAAGGAAGCTTCCCATGTTTAGTTTGGGCCGTCACTTCACGCCAATCTTTCGGGTCAGTTGGCACGTCTGCCGTTCACTT
CCTTGGTTGCCGACTAGACCAGCAGGTTTCTATTTCTCATGTGCC---ACAACAATGAGCCATTAGCACCGTCCCAACAA
CGGCTT-CTGTACACAGCAGGGC------TGCCTGATGGTCTTCACATTGGCGTCGAGCTTCAGTGGCCATCTTACCAAC
ATACCGCCATCTCCTTCGCCAAGGCCTATGAGCAGAAGCATTTCCCGACAACAACGCCATCACAACAGCCCTCTGGTCCT
ACAGGGCCCTTGTGCCCCTCCAATCTTCCCACGGCCAACGCAGCTACAATACCTTCCCCGCCAGCGCCACTACCACTTGT
TCTGTTGTCGACCATTCCAGAGCCAACCCCGCCACGGCAGGTTTGGCGCTTCACTCCAGCTGAGTT-AGAAGAACGTCGC
AGCCAAGGCCTTTTCTTCAACTGCGATGAGATTTATGTTCAGGGTCAGCGGTGCGCGCGACTCTTCTTCATCGAGGCTGA
TGACGACGACCAAGAAAGCTCCACATCTGGTAGCACCC------------------------------------------
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>chr5D_1513
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--------CCTTTACTTCAACTGCGACGAGATTTATGTTCGTGGTCACCGGTGCACGCGGCACTTCTTCATCAAGACTGA
CGACTACGGCCAAGGTAGCTCCATAACTGGTAGCCCCTCTCAATGGAGCAGAGAAGAATATTATCA-TTTACTTTTATCT
ACTTTTCATTAATTAGGGTCATGTCAGTAGTAGATCCTTCCATCATCTACGTCTGACCATTCGAGAAGGTTTTCTTAGTG
TTTAGTTCTCTTG----TGATACATATTTTTTTACCCGTCTGAGCTTTCTCCCCGAAGAGGAAGTGGTCATAACATCGTA
TGTGATAGTAATATTGTGG-ACAATGTAGACCAGTCTATTCCC----CATTCTTTATCACGAGTGCTCTCTTTGCATATT
TACCCATGCACTGTTGTGGGTAGTTCATGTTATAGTTTGGAGTGTTGTATCTATCTTCTGAATTCTGATACTATATGCAA
GACTGTT-TTAACTTTTTATTGCCTATCAAATTAACCTTACTTCCACATTTTCTCTTTGTTTTGCTTCTCTGGCAATATT
TTGCAATATGCAGCTCTATCCAGTAACCTCATCTTACGGCATGCCTGTGTACTTCTCTCTGGAACGTGCTGCTGCTCCCT
ACTTTGGTATAAAGGTCTGATATTCTTGTGACACTTCCCTTTTTACTTCCTCCGTCCCATAATTTAAGAACGTTTTTCAA
GCTAGTTAGTTTGAAAAACATTCTTATATTATGAGACGGAGGGAGTAATATATATGTTGCCCTTGTAGTATTATGCACCT
CTAAAGGTACTCATCATCGATCCTCTCATCTATGCTATAAGTTTCCTGATTCTTATTAGCAATGTACCTAAGCAGCCTTC
TCT---ATCTTTAAGTTTTTAGATCCTCATGGCAGGCTTATGGTGTTCATATGAATGGGTACATCGAGAAGC-
>SNPs
SSSSS-SSSSSS--SSSSS-S-SSS-SSS-SS-S-SSSSSS-SSSSSS-SSS-SSS---SS-SSS-SSSSSS-SSSSSS-
SSSSS---SSSSSSSS-S-SSSS-S-S-SSSSSSSS--SSSSS-S-SSS-SSS-SS-SS---SSSSS---SSSSSS-SS-
-S-SSSSSSSSSS-SSSSSS-SS-S-SS-SSSSSSSSSSSSSSSS-SSSS--SS-SSSS--SSSSSSSSSSSSSSS-SS-
S-SSSSSSSSS-SSSSSSSS-SSSSSSS-S-S-SS-SSSSSSSS-SSSSSSS-S-S--SSSS-----SSSSSSS--SSS-
-SS---SSSSSSS-SSSSSS-SSS--SSSSS-SSS--SSSSSSSS-SSSSSSS--SSSS-SSSSSS-SSSS--SSSS-SS
---S---SS-SS-SS-SS-S-SSSSSSSSSSSSSSSSSSSSS--------------------------------------
--S-----S-----------------------------------S--------------------S--------------
----------S-----------------S----------------S---S-----SS---S--------------S----
-----------------SS-------------------------------------------------------------
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------------------------------------------------------------------------------SS
----S-S-----S-S-----------------S--------------------S--------------------------
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----------------------SSS----------------S------------SS----SS------------------
----------------------S----------------S---------------------------S------------
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---------------------S--------------------------------------------------------S-
------------------------------------------------S-----------------S-------------
---------------------------------------------------------S----------------------
----S-S--S------S---------------------S-------------------------S---------------
-----------SS------S-----------S------------------------------------------------
S------S------------------------------------------------------------------------
---------------------------------------------S---------------S------------------
-----------S----------------------------S---------------------------------------
------------------------------------S---------------------S----------S----------
-------S---------------S----S--------S------S-----------------S---------SS---S--
-S-------S---S-------------------------------------------------SS---------------
-------S---------------------------------S--------------------------------------
---------------------------------------------------S----------------------------
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------------------------------------------------------------------------S-------
------S---S---------------------------------------------------------------------
---SSS-------------S--------------------------------------------S-------S
>forward_177
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-----------------------------------------------------------------------------CCA
GGTTTGCATGGGTGTTG---------------------------------------------------------------
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>reverse_1530
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---------CTGTGCCTCTCCGATTCTCC---------------------------------------------------
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