>input_sequence_83562
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-------------------------------------------------ATGGAAGAGAAGGT-----------------
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-------------------------------------------------------------------------CTCTCAA
CCTACCAAAGATGGACAACAACCTATCTCCGCGACTAAGGTTGTATCTGACGTGCGCACTCAGCACACCAAGAAGCCTAA
GTTTCTTCAGCATGTGGGGATCCAG-------------------------------------------------------
------------------------------------CATGTGCATGAGAGAACTAGTGGCACCAACCTTGAAGCACAACT
GGCAGCGGAGAAGAAAGGTAGTGCAGAGCTTCGGGAGATTGTCAACACCTTGACTAAGAAGGTAGAGGAATCAAAAGAAG
CAAGGGCCAGACAAGAAGAGGAGTACAAGAAAAAACAGGCTGAGATGGACGCTAAACTTGACCTTTTGCTAAGCCAGAGA
TGA-----------------------------------------------------------------------------
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----------------------
>chr1B_1_TraesCS1B01G303400
GCAAATCTTGGTATCCTTTTTTGAAACCTTTTACTATGCTAAAGAACACCCCAATATGCATGCATGATTCTCTTTATTAT
TACTGGTGCTTGAGAGCCCGAAGGCTGCTTTGCTACTTTTTTTGT----AAAAAAAGACCCTCGGCCTCTCCATTTTTCC
ACTTCCACTTATGAATTCGTTTTACAAATATAATGGCCCAACTTTTCAATTGTTCTCACCAATAATATTTTATGCAAATA
TCTAAATGATCAGATAGACTAATCATTTTATGCATGTATGTGTATGGACTTTACTT-AAAAAGAAGTTAATAAATACTAA
CAACCTGATTATGTAGTGATTAAAAATGCCTTCAATCCCTCTCAACATACAACATTTGGAAACAATCCTTAA-TCTACAC
ATGCATGGCACGTACCTTTTACTAGTTAGTTTTAGTTGTCAGATTATAAGTACTCACTTACCAGGTTTGAACATAACTAG
TTGCCAGCAATACAAAGTACCTATTTACTAAAAGGTTTACCATCGTTAGTTGCCAGATTAGGTATACTTAG-TTGCCAAG
TTGAATAATGCTTAGTTTGTCTCTTCCAAGTGCTTGTTCCCACATTAAGTAATCCCCAGATTACAAGTTGTTAATAGGAA
GTGTGCCTGTTGAAAAAAGCACTCTACACAACACATGTTGCAACAGAGCATGGTAGGACAACAATGCATGTATTCACTGT
AGCAGCATTGTAGAATACCCTTTGGGGTCAGCAACTCGGAAGTGTAGGCGCAACAATGCAAACAATAAATTCATGTGCAG
TTATACTTCAGCGACAAGAAAAATATGTTTGGCTATTCTCCTCTTCGTGTGATGTAGCACGCGGGCCTGTGCGAGCCACC
GCACGGTAAAACAGCGGTGCATAGTGCTTATATTAGATTTTTTCC-CCATTTGT-TTTTATGTCTTGTGGCAAAGCTGTC
TCATAACCTCATAACCATGTTTGCTTCTTGCTTGCATTGCTAGACTCAAATGGAAGAGAAGGT-----------------
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-------------------------------------------------------------------------CTCTCAA
CCTACCAAAGATGGACAACAACCTATCTCCGCGACTAAGGTTGTATCTGACGTGCGCACTCAGCACACCAAGAAGCCTAA
GTTTCTTCAGCATGTGGGGATCCAG-------------------------------------------------------
------------------------------------CATGTGCATGAGAGAACTAGTGGCACCAACCTTGAAGCACAACT
GGCAGCGGAGAAGAAAGGTAGTGCAGAGCTTCGGGAGATTGTCAACACCTTGACTAAGAAGGTAGAGGAATCAAAAGAAG
CAAGGGCCAGACAAGAAGAGGAGTACAAGAAAAAACAGGCTGAGATGGACGCTAAACTTGACCTTTTGCTAAGCCAGAGA
TGATCGAGGTCATCTATAGGGTAAGGCGTCATCGTTGAAACACAATATTGTTGTAAGGGGATGGCAATATG-----TGAT
ATTTTGCTAGTGCCATTCTTTTGTTGGAATCTATCTGGCAATGCTTTTGCTGCTGCAAACTGCATGCATTTTGTTCATGG
ACATGAATGCGTGCATTTTGCCATAGGTAGTTT-------------------------GTGGC-------ACTGGAGTGA
TTGTAATTTCATATTTATGTTGGAT-----CAGAACATGTGTC-TCTAGTGTTGAAACTTTAATT---------TATATG
TATTGTGATCTATTGTTGGATCAGAACCTATATTGCTGTTGATACTAGATAATAGTGG----------------------
--------GATGGTTTAGAAGCAATATTTAACT------------GTTTTGAGCTTTGTTGATGATGGACTAGTACTGGG
CTGAAATTAGTGGCCAAAC----------TGGGCTGAAGT------------CGT------------ACTGAAATAAGCA
GACCTAAAT-TTGTGTACTATGTCT-AAAATAATGGGCTCAATTAGTTTTTTAGA-AAGATGGGCTCAATTAGCTGAAGC
TTTGGGTTGGGTGATGCACTACAGGTGGGCTGAAATTAACTAGCAAAT-----------------------------AAA
GATTGAAGTAATCAGGCCCAACAATTGCGTACTAG-TTG--AAAAAACATAATGGGCCGACTAAGATGAAGCT-------
--------------------------------------GCTAATGGGCTGGATGGAAGGAAACATG-TAATGGGCTAAAC
CTTTAGAAATGGGCTAACAAACTGGACTGAAAGAAATAAGTTAACAAACTGGATTGGGCTGAAAGTAGGAAGCCAAAGGT
ATAATTGGGCCGGTCACTACATGGGCCTTGTAGGCTGTCATGTCCATGCACATGCCTAGTCATGAAATTCTATGACGGGT
TGAGTCTGTCACAGAAGCTCGGGCAGGGCCCAGGCCCGACACGAACTGGATGGGCTCAGCGCTGATCCATGATGGCCATG
G----------GTTAGCATCATTTGTGAAGATTTCAGTCTTCCGTCATGAAGACTAATCTATGACAGGGAATACATGATG
GTTTTCAAAAACGTCATCGATC
>chr6B_1
GCAAATCTTGGTTTCCTTTTTTGAAACCTTTTACTATGCTAATGAACACCCCAATCTGCGTGCATGATTTTCTTTATTAT
TACTGGTGCCTGAGAGCTGAGAGGCTGCTTTGCTACTTTTTTCTTTTAAAAAAAAAGACCCTCAACCTCTCCATTTTGCC
ACTTCCACTTATGAGTTTG-TTTACAAATATTATGGCCTAACTTTACCATTGTTCTCACCAATAATCTTTTATGTAAATA
TCTAAATGATCAGATAGACTAATCATTCTATGCATGCATGTGTATGGACTTACTTGAAAAAAGAAGTTAATAA-------
---CCTGATTATGTAGTGATTAAAAATTCCTTCAATCCCTCTCAACATACAACATTTGGTAACAATCCTTAAATCTACAG
ATGCATGGCACGTACCTTTTACTAGTTAGTTTTAGTTGTCAGATTATAAGTACTCACTTACCAGGTTTAAACATAACTAG
TTGCCAGAAATACAAAGTACCTATTTACTAAAAAAAATACCATGGTTAGTTGCCAGATTAGGTATACTCGATTTGCCAAG
TTGAATAATCCTTAGTTTGTATGTTCCAAGTGCTTGTTGCCACATTAAGTAATCCCCAGATTACAAGTTGTTAATAGGAA
GTGTGCCTGTTGAAAAAAGTACTCTGCACAACACATGTTGCATCAGAGCACGGTAGGACAACAGTGTAGGTATTTACTGT
AGCAGCATTGTAGAATACCCTTTGGGGTCAGCAACTCAGAAGTGTAGGTGCAGCAGTGCAGAGAATAGATTCCTGTGCAG
TTATACTGCAACGAGAAGAAAAATATGTTTCGCCGTTCTCCTCT--GTGTGATGTAGCGCGCGGGCCAGTGCGAGCCGCC
GTATGGTAAAACAGTGGTGCATAGTGCTTAGATTAGA--TTTTCCT--ATTTGT-TTTTATGTCTTGTGGCAAAGCTGTC
TCATAACCTCATAACCATGTTTGTTTGTTGCTTGCATTGCTAGACTCAAATCGAAGAGAAGGT-----------------
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-------------------------------------------------------------------------CTCTCAA
CCTACCAAAGAGGGACAACAACCTCTCTCTGCGACTAAGGTTGTATCTGACGTGCTCACTCAGCACACCAAGAAGCCTAA
GTTTCTTCAGCATGTGGGGATCCAGCATGTGCATGAGAGAACCAGTGGTACCAACCTTGAAGCATAACTGGCAGCACACC
AAGAAGCCTAAGTTTCTTCAGCATGTGGGGATCCAGCATGTGCGTGAGAGAACCAGTGGTACCAACCTTGAAGCACAACT
GGCAGCGGAGAAGAAAGGTAATGCAGAGCTTTGTGAGATTGTTAACACCTTGACTAAGAAGGTAGAGGAATCATAAGAAG
CAAGGGTCAGACAAGAAGAGGAGTACAAGACGAAGCAAGACGAGATGGATGCTAAACTTGACCTTTTACTAAGCCAGAGG
TGATCGAGCTCATCTGCAGGGTAAGGCGTCGGCATTGAAACACAATGTTGTTGTAAGCCGAGATGGACGCTGAACTTGAC
CTTTTGCTGGTGCCATGCTTTTGTTGGAAGCTATCTTGCAATGCTTTTGCTGATGCAAACTGTATGCATTCTGTTCATGG
TTATCAATGCATGCATTTTGTCGCAGGTAGTTT-------------------------GTGGC-------ACTGGAGTGA
TTGTAGTTTCATATTTATGTTGGAT-----CAGAACATATGTCATCGCATGTTGAAACTTTAATT---------TATATG
TACTGTGATCT-TTGTCAGATAAGAACATATATTGTTGTTCATATATAAT-ATTGTGG----------------------
--------AATGGTTTAGAAGCAATATTTTACT------------GCTTTGAGCTGGGTTGATAATGGACTAGAACTGTG
CTGAAATTGGTTTGCTAACCAGGCCGAACTGGGCTGAAGT------------CAT------------ACTGAAATAAGGA
GGCCTAAAC-TTGTGTACTGTGT-AAA-------------------------AAA-ATAATGGGCTCGACGAGTTGAAGC
TTTGGGCTGGGTGATACACTATAGGTGGGCTGAAATTTACTAGCAAAT-----------------------------AAA
GACTGAAGTAATTAGGCCCAACTATTGCATACTAG-TTG--AAAAAACACAATGGGCTGAATAAGGTGAAGCT-------
--------------------------------------GCTAATGGGTTGGATGGAAGGAAACATG-TAATGGGCTAAAC
CTTTAGAAATGGGCTAACGAACTGGACTGAAAGAAATAGGTTAACGAATTGGGTTGGGCTGAAAATAGGAAGCCAAAAGT
CTAATTGGGCTGGTCACTACATGGGCCTTGTAGGCTGTCATGTCCATGCACACGCCACATCATGAAATTCTATGACGGGT
TGAGTTTGTCACAAATGTTCGGGCTGGGCCCAGGCCCGACCCAAACTGGATGGGCTCAGCGCTGATCCATGACGGCCAAG
GACCGTCATGGGTCAGCATAATTTGTGAAGATTTCGGTCTTCCGTCATGAAGACCAATCTATGACAGGGAATACATGATA
GTTTTCAAAAGCGTCATCGAT-
>chr6D_422
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---------------------------AGTTTTAGTTGTCAGATTATAAGTACTCACTTACCAGGTTTGAACTTAACTAG
TTGCCAAAAATACAAAGTACCTATTTACTAAAAGGTTTACAATCGTTAGTTTCCAGATTAGTTATACTTAG-TTGCCAAG
TTGAATAATGCTTAGTTTGTCTCTTCCAAGTGCTTGTTGCCACATTAAGCAATCCAGAGATTATAGGTTGTTAATAGGAA
GTGTGCCTGTTGAAAAAAGTACTCTACACAACACCTGTTGCAACAGAGCATGGTAGGACAACGGTGCACGTATTCACTGT
AGCAGCATTGTAGAATACCCTTTGGGGTCAGCAACTAAGAAGTGTAGGTGCAGCAATGCAAACAATAAATTCATGTGCAG
TTATGCTGCAGCGACAAGAAAACTATGTTTGGTTGTTCTCCTCTTCATGTGATGCAGCACGCGGGCCTGTGCGAGCCACT
ACATGGTAAAACATCGGTGCATGGTGCTTAGATTAGA--TTTTTTTCCATTTGT-TTCTATGTCTTGTGGCAAAGCTGTC
TCATAACCTCATAACCATGTTTGTTTGTTGCTTGCGTTGCTAGATTCAAATGGAAGAGAAGGTCTCTTTGAAGGAAATAT
GCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTCATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATTA
ACCGGAAACATAATACATGTGTAAATACATAGACAAACAATGTGTCACTGGTATGCCTCTACTTGACTAGCTCGTTGATC
AAAGATGGTTGAGTTTCCTAGCCATGGACATGAGTTGTCATTTGATTAACGGGATCACATCATTAGGAGAATGATGTGAT
TGACTTGACCCATCCCGTTAGCTTAGCACTTGATCGGTTAGTTTACTACTATTGCTTTCTTCATGACATATACATGTTCT
TATGACTATGAGATTATGCAACTCCCGATTACCGAAGGAACACTCTGTGTGCTACCAAACTTCACAACGTAACTGGGTGA
TTATAAAGGTGCTCTACAGGTGTCTCCGATGGTACTTGTTGAGTTGGCATAGATTGAGATTAGCATTTGTCACTCCGATT
GTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACTATAAGCCTTGCAAGCAATGTGACTAATGAGTTAGTTG
CGGGATGATGCATTCCATAATGAGTAAAGAGACTTGCCGGTTACGAGATTGAGCTAGGTATTGAGATACCGACGATCGAA
ACTCGGGCAAGTAACATACCGATGACAAAGGGAACAATGTATGTTGTTATGCGGTTTGACCGATAAAGATCTTCATAGAA
TATGTAGGAACCAATATGAGCATCCAGGTTCCTCTATTGGTTATTGACCGGAGACGTGTCTCGGTCATGTCTACATAGTT
CTCGAACCCATAGGGTCCGCACGCTTAAAATTCTGTGACGATCGGTATTATGAGTTTATATGTTTTGATGTACCGAAGGT
AGTTCGGAGTCCTAGATGGGATCATGGACATGACGAGGAGTCTCGAAATGGTCGAGACATAAAGATTGATATATTGGAAG
CCTACATTTGGACATCGAAAGAGTTGCGGGAGAAATCGGGATTTTACCGGAGTGCCGGAGGGGTTACCGGAACCCCCCTG
GGGTTAATGGGCCCTGTTGGGCCCTAGTGGAGAGAGAGAAGGGTCGGCCAGGGCAGGCCGCGTGCCCCCTCCCCCTCTGG
TCCGAATTGGACTAGGAAGGGGGGGCTTTCCTTCTCTTTCTCCCCCTTCCTTTCCCCCTCCTAGTAGGAGTAGGAAAGAG
GGGAGTCCTACTCCTACTAGGAGGAGGACACCTCCTCCTAGCGCGCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCCCCTTGCTCCTTTATATACGGGGGCAGGGGGCACCCAAGAACACACAAGTTGATCA
TTGATCTCTCCCAGCCGTGTGCGGTGCCCCCTCCACCATAATCCACCTCGGTCATATCGTAGCGGTGCTTAGGCGAAGCC
CTGCGTCGGTAACTTCATCAACATCGTCACCACCCCGTCGTGCTGACGAAAATCTCCCTCGAGCTCTACTGGATCGTGAG
TCCGCGGGACGTCACCAAGTTGAACGTGTGCTGAACGAGGAGGTGTCGTACGTTCAGTACGGAGGATCGGTCGATCATGA
AGACGTATGACTACATCAACCGCGTTGTCATAACGCTTCCGCTTAATGGTCTATGAGGGTACGTGGACAACACTCTCCCC
TCTTGTTGCTATGCATCACCATGATCTTGCATGTGTGTAGGATTTTTTTTTGAAATTACTATGTTCCCCAACACTCTCAA
CCTACCAAAGATGGACAACAACCTATCTCCGTGACTAATGTTGTACCTGACGTGCTCACTCAGCACACCAAGAAGCCTAA
GTTTCTTCAGCATGTGGGGATCCAG-------------------------------------------------------
------------------------------------CATGTGCGTGAGAGAACTAGTGGTACCAACCTTGAAGCACAACT
GGCAGCGGAGAAGAAAGGTAGTGCAGAGCTTCGGGAGATTGTCAACACCTTGACTAAGAAGGTAGAGGAATTAGAAGAAG
CAAG-----------------------------------CCGAAATGGACGCTAAACTTGATCTTTTGCTAAGCCAGAGA
TTATCGAGGTCATCTACAGGGTAAGGCGTCATCGTTGAAACACAATATTGTTGTAAGGGGATGGCAATATG-----TGAT
CTTTTGCTGGTGCCATTCTTTTGTTGGAATCTATCCGGCAA---------------------------------------
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----------------------
>chr5D_478
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---CCAGAAATACAAAGTACTTATTTACTAAAAAGTTTATTATTGTTAGTTGCCAGACTAGGTATACTCGG-TTGCCAAG
TTGAATAATGCTTAGTTTGTATGTTCCAAGTACTTGTTGCCACGTTAAGTAATCCCTAGATTACAA---GTTAATAGGAA
GTGTGCCTGTTGAAAAAAGTACTCTGCACAACACATGTTGCAGCAGAGCACGGTAGGACAACAGTGCAGGTATTTACTGT
AGCAGCATTGTAGAATACCCTTTGGGGTCAGCAACTCAGAAGTGTAGGCGCAGTAGTGCAGAGAATAGATTCCTGTGCAG
TTACACTGCAGCGACAAGAAAAATATGTTTCGCTGTTCTCCTCCTCGTGCGATGTAGCGCATGGGCCTGTGCGAGCCGTC
GTGTGGTAAAACAGTGGCGCCTAGTGCTTAGATTAGA--TTTTCC-CCATTTGT-TTTTATGTCTTGTGGCAAAGCTGTC
CCATAACCTCATAACCATGTTTGTTTGTTGCTTGCATTGCTGGACTGAAATGGAAGAGAAAGT-----------------
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-------------------------------------------------------------------------CTCTCAA
CCTACCAAAGATGGACAACAACCTATCTCTGTGACTAAGGTTGTATCTGACGTGCTCACTCAGCACACCAAGAAGCCTAA
GTTTCTGTAGAATGTGGGGATCCAGCATGTGCATGAGAGAACCAGTGGTAC-----------------------------
--------------------------------------------------------------CAACCTTGAAGCACAACT
GGCAACGGAGAAGAAAGGTAATGCAGAGCTTCGTAAGATTGTCAACACCTTCACTAAGAAGGTAGAGGAATCAGAAGAAG
CAAGGATCAGACAAGAAGAGGAGTACATGAAGAAGCAAGCCTTGATGGACTCTAAACTTGACCTTTTGCTAAGCCAGAGG
TGATCGAGGTCATCTACAGGGTAAGGCGTCGTCATTGAAACACAATATTATTGTAAG-----------------------
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----------------------
>chr5B_899
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-------------------------GCTGAGATTAGA--TTTTCCT--ATTTGT-TTTTATGTCTTGTGGCAAAGCTGTC
TCATAACCTCATAACCATGTTTGTTTGTTGCTTGCATTGCTAGACTCAAATGGAAGAGAAGGT-----------------
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-------------------------------------------------------------------------CTCTCAA
CCTACCAAAGAGGGACAACAACCTCTCTCTGCGACTAAGGTTGTATCTGACGTGCTCACTCAGCACACCAAGAAGCCTAA
GTTTCTTCAGCATGTGGGGATCCAGCATGTGCATGAGAGAACCAGTGGTACCAACCTTGAAGCATAACTGGCAGCACACC
AAGAAGCCTAAGTTTCTTCAGCATGTGGGGATCCAGCATGTGCGTGAGAGAACTAGTGGTACCAACCTTGAAGCACAACT
GGCAGCGGAGAAGAAAAGTAATGCAGAGCTTTGTGAGATTGTCAACACCTTGACTAAGAAGGTAGAGGAATCATAAGAAG
CAATGGTCAGACAAGAAGAGGAGTACAAGAAGAAGCAAGACGAGATGGATGCTAAACTTGACCTTTTACTAAGCCAGAGG
TGATCGAGATCATCTACAGGGTAAGGCGGCGGCATTGAAACACAATGTTGTTGTAAGCCGAGGTGGACGCTAAACTTGAC
CTTTTGTTGGTGCCATGCTTTTGTTGGAAGCTATCTTGCAATGCTTTTGCTGATGCAAACTGTATGCATTCTGTTCATGG
TTATCAATGCATGCATTTTGTCGCAGGTAGTTT-------------------------GTGGC-------ACTGGAGTGA
TTGTAGTTTCATATTTATGTTGGAT-----CAGAACATATGTCATCGAATGTTGAAACTTTAATT---------TATATG
TACTGTGATCT-TTGTCGGATAAGAACATATATTGTTGTTCATATATAAT-ATTGTGG----------------------
--------AATGGTTTAGAAGCAATATTTTACT------------GTTTTGAGCTGGGTTGATAATGGACTAGAACTGTG
CTGAAATTGGTTTGCTAACCAGTCCGAACTGGGCTGAAGT------------CAT------------ACTAAAATAAGCA
GGCCAAAAC-TTGTGTACTGTGT-AAA-------------------------AAA-ATAATGGGCTCGCTGAGTTGAAGC
TTTGGGCTGGGTGATACACTATAGGTGGGCTAAAATTTACTAGCAAAT-----------------------------AAA
GACTGAAGTAATTAGGCCCAACTATTGCATACTAG-TTG--AAAAAACACAATGGGCTGAATAAGGTGAAGCT-------
--------------------------------------GCTAATGGGCTGGATGGAAGGAAACATG-TAATGGGCTAAAC
CTTTAGAAATGGACTAACGAACTGGACTGAAAGAAATAGGTTAACGAATTGGATTGGGCTAAAAATAGGAAGCCAAAAGT
CTAATTGGGCTGATCACTACATGGGCCTTGTAGGTTGTCATGTCCATGCACACGCCACGTGATGAAATTCTATGACGGGT
TGAGTTTGTCACAAATGTTCGGGCTGGGCCCAGGCCCGACCTAAACTGGATGGGCTCAGCGCTGATCCATGACGGCCAAG
GACCGTCATGGGTCAGCATAATTTGTGAAGATTTCGGTCTTCCGTCATGAAGACCAATCTATGACAGGGAATACATGATA
GTTTTCAAAAATGTCATCGAT-
>chr7B_915
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-----------------------------------------TTAC-CTATTTGTCTTTTATGTCTTGTTGCAAAGCTGTC
TCATAACCTCATAACTATGTTTGTTTGTTGCTTGCATTGCTAGAATAAAATGGAAGAGAAGGT-----------------
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-------------------------------------------------------------------------CTCTCAA
CCTACTAAAGATGGACAACAACCTATCTCTGCGACTAAGGTTGTATCTGAGGTGCTCACTCAGCACACCAAGAAGCCTAA
GTTTCTTCAGCATGTGGGGATCCAG-------------------------------------------------------
--------------------------------------TGTGCGTGAGAGAACTAGTGATACCAACCTTGAAGCACAACT
GGCAGCAGAGAAGAAAGGTAATGCAGAGCTTCGAGAGTTTGTCCACACCTTGACTAAGAAGGTAGAGGAATCAGAAGAAG
CAAGGGTCAGACAAGAAGAGGAGTACAAGAAGAAGCAATTGGAGATGGATGCAAAACTTGACCTTTTGCTAAGCCAGAGG
TGATCAAGTTCAGCTACAGGGAAAGGTGTGGTTGTTGAAACAGTATATTGCACTAAGGTGATGGCAATGTG-----TGAT
ATTTTGCTGGTGCCATGCTTTTGTTGGAAGTTATCTGGTAATGCTTTTGCTGTTGAAAT-TGCATGCGAACTATTCATGT
ATATCATGCAGCCGC----------GGTAATTT-------------------------GTGAC-------ACCAGAGTGA
TTGTAGTTTCATATTTATGTTGGAT-----CAGAACATGTGTGATCTGATGTGGGAACTTAATTTATGTTGTCACATT--
-ATTATGTTC-----------TGTA--ATATATTGTTGTTCATATATAAC-ATTGATG----------------------
--------TATAGTTTAGAAGCAATCATTTACT------------GTTTTGACCTGGGTTGATGATGGACTGGAACAAGG
CTGAAATTGGTTGGCTAAGCAGACCAAACTGGGATGAAGTTCGTTGGCAAACCAC------------ACTGAAATAAGCA
GGCCTAGAAATTGTGTCCATGCTAAAA-------------------------ATA-ATAATGGGCTCAATCAACTGAAGC
TTTGGGCTGGGTGTTGCACTATAGCTGGGCCGAAATTGACTAGCAATC------------------------------AG
GGCTGAATTAATTCGTCCCAACAATAGCATACTGGATTA--AAAAAACACAATGGGCTGAACAAAGTGAAGCTTAAATGG
GTTGAAATTAGATAGGGTTGCTAGACAGAAGGAAATGGGTTAACGGGTTGTACCATAGGAAACATA-TAATGGGCTAAAC
CTTTACAAATGGGCTAACAAATTGGACTGAAGGAAATAGGTTAACAGACCAGATTGGGCTGAAAACATAATGCCAAAAGT
GTAATTGGGCCGGCCACTACATGGGCCTT-TAGCCCATCATGTCCATGCGCATGCCACATCATGAATTCTGTGATGGTTT
TGAGTC-ATCACAAAGGTCCAGGCGAGGCCCAGGCCTGGCCCAAATTGAATGGGCTTAGTGCTGATCTATGACGGCCAAG
GATCATCATGGTTCGACACAATTTGTGAAGATTTTGGCCCACCGTCACGAAGACCAATCTATGACAGGGAATACATGATG
GTTTTCAAAAACGTC-------
>chr2D_921
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------------------------------------------------ATTTGT-CTTTATGTCTTGTGGCTAAGTTGTC
CCATAACCTCATAACCATGTTTATTTATTGTTTGCATTGCT-------------------AGT-----------------
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-------------------------------------------------------------------------CTCTCAA
CCTACTAAAGATGGACACCAACCTATCTCTATGATTGAGGTTGTATCTAATGTGCTCACTTCGCACACCAAGAAGCCTAG
GTTTCTTCAGCATGAGGGGATCCAC-------------------------------------------------------
------------------------------------CATGTGCATGAGAGATCCAGTGGTACCAACCTGGAAGCACAACT
AGCAG-GGAGAAGAAAGGGAGTGCAGAGCTTCGGGAGGTAGTCAACACCTTGACTAAGAAGGTAGAGGAATAAAAAGAAG
CGAGGTTCAGACAAGAACAGGAGTGCATGAAGAAGCAAGCCGACGTGGAT-TAAAACTTGACCTTTTGCTAAGCCAGAGG
TGATCAAGTTCAGCTACAGGGTAAGGTGGTTGTTG----AAACACTGTTGTTGTAAGGTAATGGCAATATG-----TGAT
CGTTTGCTGGTGACATGCTTTTGTTGAAAGTTATGTGGTAATGCTTTTGTTGCTCCGAACTGCATGCATTCTGTTCATGG
ATATGAATGCAAGCATTTTGCCATGGGTAGTTT-------------------------GTGGC-------AATGGAGTGT
TTGTAGTTTCATATTTATGATGGAT-----CA-----TGTGTGATCTGTTGTTGGAACTTAATTTATGTTGTCATATATG
TGTTGTGATCTATTGCTGGATTAGAATCTATGTTGTTGTTCATATATAAC-ATATTTTAGGGCTAAAGTTGTTCATATAT
AACATTATGGGTTTGTTTAGTTTTACAGTT--------------------------------TGATGGAATAGAACTGGG
CTGAAATCAGTTGGCTAACCGTTCCGAA-TGGGTTGAAAT------------TGGTTGGCTAATCAGACCAAAATTT---
-------------TGTACCGTGT-TG---------------------------AA-AAAATGGGCTCAATGAGGAAAACA
TTTGGGTTGGGTGATGCACTATAGCTAGGCCTAAATTTGGGTT-------------------------------------
--------------------------------------------------------------------------------
-----------------------GACCGAAGGAAATGGGGTAACGGGCTGGAATTGAGAAAACATACTAATGAGCTGAAC
CTTTAGAAATGGGCTAACAAACTGGACTACATGAAATAGGTT--------------------AAGTAGGAGACCAAAAGT
CTAATTTGGCCACCCACTACATGGGCCTTGTAGGCCTTCGTGTCCATGCACGCGCCATGTCATGGAATTCTATGACAGTT
TGAGTC-GTCATGAAGG-CCTGGCTGGGCTCAGGCCCAACTCGAACTGAACGGGCTCATGCCTGATCTATGACGTCCAAG
CATCATCACATGTCAGCATGATTTGTGTAGATTTTGTCCCTATGTCATGAAGACCAATATTTGACAGGGAATACATGATG
ATTTTCAAAAA-----------
>chr4A_923
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--------------------------------------------------TTGT-CTTTATCTTTTGTGGCAAAGCTGTC
TCATAACCTCATAACCATGTTTGTTTGTTGCTTGCATTGCTAGACTCAAATGGAAGAAAAGGT-----------------
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-------------------------------------------------------------------------CTCTCAA
CCTACTAAAGATGGACAACTACCTATCTCTGTGACTAAGGTTGTATCTGACGTGCTCACTCAGCACATCAAGAAGCCTAG
GTTTCTTCAGCACGTGGGGATCCAG-------------------------------------------------------
------------------------------------CATGTGCGTGAGAGAAGCAGTGATGCCAACCTTGAAGCACAACT
GACAGCGGAGAAGAAAGTGAATGCAGAGCTTCTGGAGGTTGTCAACACCTTCACTAAGAAGGTAGTGGAATCAGAAGCAG
CATGGGTCAGACAAGAAGAGGAGTACATGAAGAAGCAAGCCGAGATCGACGCAAAATTTGACCTTTTGCTAAGCGAGAGG
TGATCGAGTTCAGCTATATGGTAAGGCATGGTCATTGAAACATGATATTGTTGTAAGGTGATGGCAATGTG-----TGAT
CTTTTGCTGCTGCCATGCTTTTGTTGGGATATATCTGGTAATGCTTTTACTGCTGCAAACTACATGCATTTGGTTTATGG
ATATGAA-------------------------T-------------------------GTGGC-------ACTGGAGTGA
ATGTAGTTTCATATTTATGTTGGATTAGAACA-----TGTGTGATCTTATGTTAGAACTTAATTTATAT----------G
TACTGTGATCTATTGCTCGATCAGAATCTATATTGTTGTTCGTATATAAT-ATTGTGG----------------------
--------GATGGTTTAGAAGCAATATTTTACTTAATATTTAACTGTTTTGAGATGGATTGATGATGGACTAGAACTGGG
CTGAATTTGGTTTGCTAACCAAGCTG----------------------------------------------AATAAGTA
GGCCTAAAA-TTGTGTATTGTGT-TAA-------------------------AAA--TAATTGCCTCAATGAATTGAAGC
-TTTGGTTGGGTGATGCACTATAACTGGGCCGAAATTGGTTGTCTAAAAAATGCTGGGCTGAAATTGGCTAGCAAACAAA
GATTGAAGTAATCAGGCCCAGCAATTGCATACTAG-TTG--AAAGGATACAATGGGCTGAATAAAGTGAAGTT-------
--------------------------------------GCTAACGGGCTGGACCAAAGGAAAAATG-TAATGGGCTAAAC
CTTTAGAAATGGGCTAACAAACTGGACTGAAAGAAATAGGCTAACAGATTGGATTGGGCTGAAAATAGGAGGCCAAAATT
CCAATTGGGCCAGCCATTACATGGG-CTTGTAGGCGGTCATGTCCATGTACATGCCACATCATGAAATTATGTGACGGGT
TGATTC-ATCACAAAGGCTCAGGCCGGGCCCAGGCCCGACCCGAACTGGACGGGCTCAGTGTTGATCCATGGCGGCCAAG
GAATGCCATGGGTCAGCATAATCTGTGATGATTTCGGCCCTCCATCACGAAGACCAATCTATGACAGGGAATACATGATG
GTTTTCAAAAACATCGTCGA--
>chr2D_928
--------------------------------------------------------------------------------
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--------------------------------------------------------TTTATGTCTTGTGGCAAAGTTGTC
CCATAACCTCATAACCATGTTTATTTGTTGTTTGCATTGCT-------------------AGT-----------------
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-------------------------------------------------------------------------CTCTCAA
CCTACTAAAGATGGACACCAACCTATCTCTATGATTGAGGTTGTATCTAATGTGCTCACTTAGCACACCAAGAAGCCTAG
GTTTCTTCGGCATGAGGGGATCCAC-------------------------------------------------------
------------------------------------CATGTGCGTGAGAGATCCAGTGGTACCAACCTTGACGTACAACT
AGCAGTGGAGAAGAAAGGGAGTGCAGAGCTTCGGGAGGTAGTCAACACCTTGACTAAGAAGGTAGAGGAATCAAAAGAAG
CGAGGTTCAAACAAGAAGAGGAGTGCAGGAAGAAGCAAGCCGACGTTGAT-TAAAACTTGACCTTTTGCTAAGCCAAAGG
TGATCAAGTTCAGCTACAGGGTAAGGTGGTTGTT----AAAACACTGTTGTTTTAAGGTAATGGCAATATG-----TGAC
CGTTTGCTGGTGACATGCTTTTGTTGAAAGCTATGTGGTAATGCTTTTGGTGCTCCAAACTGCATGCATTCTGTTCATGG
ATATGAA-------------------------TGCAAGCATTTTGCCTGGGGTAGTTTGTGGC-------ACTAGAGTGT
TTGTAGTTTCATATTTTTGATGGAT-----CA-----TCTGTGATCTGTGGTTGGAACTTAATTTATGTTGTCATATATG
TGTTGTGATCTATTGCTGGATCAAAATCTATTTTATTGTTCATA------------------------------------
--------------------------------------------------------------------------------
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----------------------
>chr5A_967
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---------------CACGTTTGTTTGTTGCTTGCATTGCTAGAATCAAATGGAAGAGAAGGT-----------------
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-------------------------------------------------------------------------CTCTCAA
CCTACTAAAGATGGACAACAACCTATCTCTGTGACTAAGATTGTACATGAGGTGCTCACTCAGCACACCAAGAAGCCTA-
-TTTCGTCAGCATGTGGGGATCCAG-------------------------------------------------------
------------------------------------CATGTGCATCAGAGAACTAGTGGTACCAACCTTGAAGCGCAACT
GGCAACAGAGAAGAAAGGGAATGCAGAGCTTTGGGAGATTCTCAACACCTTGACTAAGAAGGTAGAGGAATCAGAAGAAG
CAAGGGTCAGATAAGAAGAAGAGTACAGGAAGAAGCAAGCCGAGACAGACATAAAACTTGACCTTTTGCTAAGCAAGAGG
TGATCAAGTTCAGCTACAGGGTAAGGCGTGGTCATTGAAACACTATGTTGCTCTAAGGTGATAGTAATGTA-----TGAT
ATTTTGCTGGTGCCATGCTTTTGTTGGAATCTATCTCGCAATGCTTTTGTTGTTG-AAACTGCATGCGAACTATTCATGT
ATATGAA-------------------------TGCA--------GCTGCAGGTGGTTTGTGACACCAGAGACCAGAGTGA
TTGTAGTTTTATATTTATGTTGGAT-----CGGAACATGTGTGATTTGGTGTTGCAACTTAATTTATATTGTCAAATATG
CATTATGATC-----------TATAACCTATATTGGTGTTTATATATAAT-AGTGTGG----------------------
--------TATTGTTTAGAAGCAATATTTTACT------------GTTTTGAGCTGGGTTGATG---GACTAGAACTAGG
CTTAAATTGGTTGGCTAGCCGGACTGAACTGGGTTGAAGT------------CGGTTGGCAAACCACACCAAAATAAGCA
GGCCTGGAAATTGTGTATTGTGCT--A-------------------------AAA-ATAATGGGCTCAATGAATTGAAGC
TTTGGGCTGTGTGATACACTATAGCTGGGCCTAAATTGATTGGCAAAC------------------------------AG
GACTGGATTAATATGGCCAAACAATTGCATAATGG-ATGACAAAAAACACAATGGGCTGAAGAAGGTGAAGCTTAAATGG
GTTGAAATTAGGAAGGGCTGCTAGACCAAAGGAAATGGGCTAACGAGTTGTCCGAGAGGAAACATG-TAATGGGCTAAAC
CTTTACAAATGGGCTAACGAACTAGACTGAAGGAAATAAGTGAACGGATTGGATTGGGCTAAAAACAGGATGCCACAAGT
CTAATTGGGCCAGCCACTAGATGAGCCTTCTAGGCCGTCATGTCCATGCGCACGCCATGTCATGAAATTCTGTGACGGCT
TGAGTC-GTCACAAAGGCCCGGGCTAGGCCCAGGCCCGACCCGAATTGGATCGGCTCAATGCTAATCTATGACAGCCAAG
GAACGTCATGGGTCGACATAATTTGTGAAGATTTTGGCCCGCTGCCATGAAAACCAATCTATGACAGGGAATACATGATG
GTTTTAAAAAAC----------
>chr5D_1414
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--------AGTGCCATGCTTTTGTTGGAATCTATATGGCAATGCTTTTGCTGCTACAAACTGCATGCATTCTGTTCATGG
ATATGAA-------------------------TGCATGCATTTTGCTGCAGGTAATT-GTGGC-------ACTGGAGTGA
TTGTAGTTTCCTATTTATGTTGGAT-----CAGAACACTTGTCATCTGATGTTGAAACTTTATTT---------TATATG
TAGTGTGATTTGTTGTCGGATCAGAACCTATATCACTGTTCATATACTC---------------------------ATAT
AACATTTTGATGGTTTAGAAGCAATATTTTACT------------GTTTTGAGCTGGGTTGATGATGGACTAGAACTGGG
CTGGAATTGGTTTGCTAACCAGGCCGAACTGGGCTGAATT------------CAT------------ACTTAAATAAGCA
AGCCTAAAT-TTGTGTATCGTGT-TAA-------------------------AAA-ATAATGGGCTCAATGAGTTGAAAC
TTTGGGCTGGGTGATGCGCTATAGGTGGGATGAAATTAACTAGCAGAT-----------------------------AAA
GACCAAGTTAATCAGGCCCAATAATTGCATACTAG-TTG--AAAAAACACAATGGGCTGAATAAGGTGAAGCT-------
--------------------------------------GTTAATGGGCTGGATGGAAGGAAACATG-TAATGGGCTAAAC
CTTTAGAAA-------ACAAATAGGACTGAAAGAAATAGGTTAACGGA----------------------AGTCAAAAGT
CTGATTGGGCTGGTCACTACATGGGCCTTGTAGGCTGTCATGTCCATGCACACGCCACGTCATGAAATTCTGTGACGGGT
TGAGTCTGTCACAAAAGCCCGGGCTGGGCCCAGGCCCGACCCGAACTGGATGGGCTCAGCGCTGATC-------------
-----------------------------GATTTCGGTCTTCCACCATGAAGACCAATCTATGACAGGTAATACATGATG
GTTTTCAAAAACGTCATCAAT-
>chr6D_1775
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-------------TGTACTATGTTTAAAAATAATGGGCGCAATTAGTTTTTTTATCAAGATGGGCTCAATTAGTTGAAGC
TTTGGGTTGGGTGATGCACTACAGGTGGGCCGAAATTAACTAGCAAAT-----------------------------GAA
GATTGAAGTAATCAGGCCCAAAAATTGCATACTAG-TTG--AAAAA-CATAATGCGCCGACTAAGATGAAGCT-------
--------------------------------------GCTAATGGGCTGGATGGAAGGAAACATG-TAATGGGCTAAAC
CTTTAGAAATGGGCTAACATACCGGACTGAAAGAAATAAGCTAACAGACTGGATTGGGCTGAAAGTAGGAAGCCAAAGGT
CTCATTGGGCCGGTCACTACATGGGCCTTGTAGGGTGTCATGTCCATGCACACGCCTCATCATGAAATTCTATGACGGGT
TGACTGTGTCATAGAAACTCGGGCTGGGCCCA-GCCCGACCCGAACTGGATGGGCTCAGCGCTTATCCATGACGACCAAG
GACCGTCATGGGTTAGCACAATTTGTGAACATTTCAGTCTTCCGTCATGAAGACTAATCTATGACAAGGAATACATGATG
GTTTTCAAAAACGTCATCGAT-
>chr1B_1813
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----------------------------------------------------AGA-AAAATGGGCCCAATGAGGTGAACA
TGTGGGTTGGGTGATGCACTATAGCAGGGCCGAAATTGGCTAGCAAAC------------------------------AA
GACCAAAATAAGTCAGCCCAACAGTTGCATACTAG-ATG--AAAAAACATAATGGGCTGAATAAGGCAA-----------
--------------------CTAGACCGAAGGAAATGGGGCAACGGGCTGGACTTGAGGAAACATGCTAATGGGCTGAAC
CATTAGAAATGGGCTAACAAATTGGACTAAAGAAAATAGGTTAATGGATTAGACTGGGCTGAAAACAAGAGGCCAAAAAT
CTAATTGGGCCACCCGCAT-ATGGGTCTTGTAGGCCTTCATGTCCATGCACCCACCACGTCATGAAATTCTATGACGGGT
TGAGTC-ATCATGAAGGCCCGGGCTGGGCTCAGGCCCAACCCGAACTGAATGGGCTCATGGTTGATCTATGATGACCAAG
GATCGTCATAGGTCAGCATAATTTGTGAAGATTCTGTCCCTTCGTCACGAAGACCAATCTATGACAGGGAATACATGATG
GTTTTCAAAAACGCCATC----
>SNPs
------------S-----------------------------S------------S---S---------S----------
---------S-------SSSS---------------------SS-------------------SS------------S--
--------------S--S-S-----------S------S------S-S------------------S-------S-----
---------------------------S--------S--------------SSS-S-----------------SSSSSSS
SSS------------------------S-------------------------------S-------------------S
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
-------------------S-------------------------------------------S----S-----------
-------------------------------------S--------------S---------------------------
-------S--------------------------S---------------------------------------------
---S--------------------------S------SS-----------------------------------------
-----------------------S--S-----------------------------------------------------
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-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
------S------------------------S--S--S--S---------------------------------------
--------------------------------------------------------------------------------
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-S------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
----------------------------------------S---SSSS--S-----------------------------
-----------------------------S-------------------------SS----------------S------
-----------S-S-S----------------------------------------------------------------
-S---------------------S--------------S-----------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S--------------------------------------------------------S----------------------
------------------------S---------------S-------------------------------------S-
-------------------S------------------------------------------------------------
---------------------S
>forward_158
--------------------------------------------------------------------------------
----------------------------------------------------------CCCTCGGCCTCTCCATTTTT--
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----------------------
>reverse_4014
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-------------CCAAACTGGGCTGAAGTCGT-----------------------------------------------
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----------------------
