>input_sequence_83550
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ATGGCGTACGACGGCATGCAGTTCCGCGACCCT-CCCATGCACCACGACAACGACGAGCAGCAACGTGGATGGGAGTGGA
CTGCATCCCACGTCGTACGTTCACGCAGCAAACCACCACCCCGCACCCTGCGGTCTGCTCCCTCGTCGGTGGTGGATCCA
AGCTCATATGCGCCCATGCAGTCCACTGCATCCGTGAAGGTCACCGGAGCTCATCT----------------ACTCCTTT
GTTCTTCAGTATGCAGTTTGGTTCTCTTTTTTGCTTTCAAATTTA-TTGTATGCCGAAGTGCAGTTTGTCAAATGGGTGT
ATTCTTGCATGCAGTTCGGTGATGTTCTGTAA------------------------------------------------
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>chr5A_1_TraesCS5A01G175000
GCCCCC-ACGCCCACCACTCGACCACCTCTCTGTCTCTCTTCCTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCCAAGTAACCCT
GCCCCGACCTGCCGCTAGATGGGATCCGGTCTGCTAGGCGCCGGATCCAGGCCACATCGGGCCCCCGCGAAGCCCCGCTG
CCGGAGCCAAGCCGCGACGGCCCCCATGCCGCCGCCCCACCTGCTCCCCC------------------------------
-------CCCACGCCGCCGCCCTACCTGCTCCCCTCGAGCTGCCCCTGCTCCGGCCCTAGCGCTGCCCCTGTCCTGCATC
TCCTGCTCCCCCCAAGCAGCAGGCTCGTCACGTCCCCCCGCCGGCCTTTCATGCAG-TCGGCGACCACATCTGTGCAT-C
CACAGCCGCGCGGGACGACCTCAACAGCACCAGAGGCGAGCCGCCCTCCCCTTTCTCCTTTGCTTCTTCCTCCTCTCCCC
GCAAACTCCCTCCGGCGAGGTTCAGTACACGTCCATCCCCCGGAGGCTCGCGTGCAGTTCAGCCAGCGACGGCGTGTAGT
ATGGCGTACGACGGCATGCAGTTCCGCGACCCT-CCCATGCACCACGACAACGACGAGCAGCAACGTGGATGGGAGTGGA
CTGCATCCCACGTCGTACGTTCACGCAGCAAACCACCACCCCGCACCCTGCGGTCTGCTCCCTCGTCGGTGGTGGATCCA
AGCTCATATGCGCCCATGCAGTCCACTGCATCCGTGAAGGTCACCGGAGCTCATCT----------------ACTCCTTT
GTTCTTCAGTATGCAGTTTGGTTCTCTTTTTTGCTTTCAAATTTA-TTGTATGCCGAAGTGCAGTTTGTCAAATGGGTGT
ATTCTTGCATGCAGTTCGGTGATGTTCTGTAAAAACTAAAAAAAA-TTGCTGCTGGTAGTATAAGAAATTCAGACCGATA
GTTTGCCTTTTGCAGTTCACTGCTCCTCTCCAGGCAACACGCTATATCCTTTTT-TCGGGTGTTCATACAAAAATGCAAG
ACTTAGTTTGTATATTATAGAAAAAAATCTAATGTGGTTCATTTGTATGAAGGCTTGTGGTTCGCTGTGTAAAAAGAAAA
GGAAAGAAAAACAACGA-TGTAGCCCTTCTTTTGTAAGAGCACTTCACCTCGTCCTTGAGCCAAAACTAC-AAAAAAAAG
AGTTGTCAAACAATATAAAAAATGTTGTAGTTCTCTTGACCGCGTCACGCAGTGCAAAACTCGTTAAAACAAAAACAAAT
GTTATAAAATAAAAA-CAAAACAATGCAGTACATTAGCCTCAAAACAGAAACAAATGTTATAAAAT--AAAAAACAAAAC
AATGTAGTACACTATCCTCAAGAATGCGGTCTAAATGCATTAGTAAAAAAGAGTCATGGAAAGAAACAACTAATGCAGTA
CTCTTGGCTCATCCACACAATTCAAACAAAGAAAA--AGAAAATCCTTTTTTTAGAAGTTCACTCATGCGGTTCACTTTA
GGTAGTGTCGCGGCTCACTTACTCTCGATTTGAAGTGCAAAAAACATGTTACAGAGATGGCAAAAAAAGGATTGTGGTTC
TTGCAAAATTTGCATCGACAAAGGAAATCATGAAGTTCACTTGACTGCCTGTTGCAGTGCGGTTTTCCGTTTGAAGCAGT
GCGTTCTTCTATCCGATGAAAGGTCCACTCGCTTGGTCAATGCGCATAAAAATTTAATAAGTATGAAAAAAAATACAACA
AAAACTCATGAGGTTCACTTTTGATAGTGTTGCGGTTCATTTTCGGAAGTGTTGCGGTCCACTCTCGTTCAAAAAAGAGT
TG-AAAAAAGACAACAAAAACTTTTGCGAGC-AA-TTTATGTCCGACAAAAAGAAATCATGAAGTTCACTTGGCTGCCTG
CTGC
>chr1A_1
GCCCCCTACGCCCACCACTCGACCACCTCTCTGTCTCTCTTCCTCCACCACCGACGCCTCCCCCAATTCCCCACCACCAA
CCACCTTCCTCTCCTCCCCTGGCGCCGCCCCCTCCAGCCTCATCCCTTAGCGCCGCCACCCTCCAGCCTCATCCCCTGGC
GCTGCCCCCCTCCAGCCTTATTCCCTTGGCTCCACCCC-TCCCCACCTCCCCTCCAGCCAACTCCCTAGCCACTGGCCGC
ACCAGTGCCGCAACGCTAGATGGCTGGCGCCGCAACGTCCCCGAACGGTACGCCTACCCTCCGCCACCCACGGCACCGTG
CGCAGGCGGTGGTGCCA---------------------------------------------------------------
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-----------------------------------------------------------------CCTCCAAGAAACCCT
-CCCCGACTTGCCGCTAGATGGGATCCAGTCCTCTAGGCGCCGGATCCAGGCCACATCGGGCCCCCGCGACGCCTCGCTG
CCGGAGCCAAGCCGCGACGGCCCCCACGTCGCCGCCCCACGTGCTCCCCCCACGTGCTCCCCCCACGCCGCCGCCCTA--
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-CCTGCTCCCCCTGAGCAGCAGGCTCGTCACGTCCCCCCGCCGGCCTTCCATGCAGTCCGACAACCACATCTGTGCAG-C
CACAGCCGCGCGGGACGACCTCAACAGCACCGGAGGCGAGCCGCCCTCCCCTCTCTCCTTTGCTTCTTCCTCCTCTCCCC
GCAAACTCCCTCCGGCGAGGTTCAGTACACGTCCATCCCCCGGCGGTTCGCGTGCAGTTCAGCCAGCGACGGCGTGTAGT
ATGGCGTACGACGGCATGCAGTTCCGCGACCCT-CCCATGCACCACGACAACGACGAGCAGCAACATGGATGGGAGTGGA
CTGCATCCCACGTCGTACGTTCACGCAGCAAGCCACCACCCCGCACCCTGCGGTCTGCTCCCTCGCCGGTGGTGGATCCA
AGCTCATATGCGCCCATGCAGTCCACTGCATCCGTGAAGGTCACCGGAGCTCATCT----------------GCTCCTTT
GTTCTTCAGTATGCAGTTTGGTTCTCTTTTTTGCTTTCAAATTTA-TTGTATGCCGAAGTGCAGTTTGTCAAATGGGTGT
ATTCTTGCATGCAGTTCGGTGATGTTCTATAAAAAACTAAAAAA-TTTGCTGTTGGTAGTATAAGAAATTCAAACCGATA
GTTTGCCTTTTGCAGTTCACTGCTCCTCTCCAGGCAGCACGCTATATCC-TTTT-TCGGGTGTTCATACAAAAATGCAAG
ACTTAGTTTGTATATTATAGAAAAAAATCTAATGTGGTTCATTTGTATGAAGGCTTGTGGTTCGCTGTGTAAAAAGAAAA
GGAAAGAAAAACAACG-ATGTACCCCTTCTTTTGTAAGAGCACTTCACCTCGTCCTTGAGCCAAAACTAC-AAAAAA--G
AGCTGCCAAACAATATAAAA-ATGTTGTAGTTCTCTTGACCGCGTCATGCAGTGCAAAACTTGTTAAAACAAAAACAAAT
GTTATAAAATAAAAAACAAAACAATGCAGTACACTAGCCTCAAAACAAAAACAAATGTTATAAAAT--AAAAAACAAAAC
AATGTAGTACACTAGCCTCAAGAACGCGGTCTAAATGCATTAGTAAAAAAGAGTCATGGAAAGAAAAAACTAATGCAGTA
CTCTTGGCTCATCCACACAATTCAAAAAA-GAAAAAGAAAATCC---TTTTTTAGAAGTTCACTCATGCGGTTCACTTTA
GGTAGTGTCGCAGCTCACTTACTCCCGATTTGAAGTGCAAAAAACAAGTTACAGAGACGACAAAAAAAAGATTGTGGTTC
TTGCAAAATTTGCATCGACAAAGGAAATCATGAAGTTCACTTGACTGCCTGCTGCAGTGCGGTTTTCCGTCTGAAGCAGT
GCATTCTTCTGTCCGATGAAAGGTCCACTCGCTTGGTCAACGCGCATAAAAATTTAATAAGTATGAAAAA--ATACAACA
AAAACTCATGATGTTCACTTTTGATAGTGTTGCGGTTCATTTTCGGAAGTGTTGCGATCCACTCTCGTTCAATTTTTTTT
TGAAAAAAAGACAACAAAAACTTTTGCGAGC-AAGTTTATGTCCGACAAAAAGAAATCATGAAGTTCACTTGGCTGCCTG
CTGC
>chr1A_1
GCCCCC-ACGCCCACCACTCGACCACCTCTCTGTCTCTCTTCCTCCACCACCGACGCCTCCCCCAATTCCCCACCACCAA
CCACCTTCCTCTCCT-CCCCGGCGCCGCCCCCTCCAGCCTCATCCCTCGGCGCCGCCACCCTCCGGCCTCATCCCCCGGT
GCTGCCCCCCTCTAGCCTTCTTCCCCTGGCTCCGCCCC-TCCATACC---------------------------------
---AGTGTCGCGGCGCTAGATGGCCGACGCCATGACATCCCCGAACGGTGCACCTACCCTCCGCCACCCACGGCACCGTG
CGCAGGCGGCGGTGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTA--------------------------------------------------------CGTC
TCCTGGTCCCCCCGAGCAGCAGGCTCGTCACGTCCCCCTGCTGGCCTTCCGTGCAGTTCGGCGACCACATCTGTGCAG-C
CACAGCCGCGCGGGACGACCTCAACAGCACCGGAGGCGAGCCGCCCTCCCCTCTCTCCTTTGCTTCTTCCTCCTCTCCCC
GCAAACTCCCTCCGACAAGGTTCAGTACACGTCCATCCCCCAGTGGCTCGCGTGCAGTTGAGCCAGGGACGGCGTGTAGA
ATGGCGTACGACGGCATGCAGTTCCGCGACCCT-CCCATGCACCACGACAATGACGAGCAGCAATGTGGATGGGAGTGGA
CTGCATCCCACGTCGTACGTTCACGCAGCAAACCACCACCCCGCACCCTACGGTCTACTCCCTCGCGGGTGGTGGATCCA
AGCTCATATGCGCCCATGCAGTCCACTGCATCCGTGAAGGTCACCGGAGCTCATCT----------------GCTCCTTT
GTTCTTCAGTATGCAGTTTGGTTCTCTTTTTTTCTTTCAAATTTA-TTGTATGCCGAAGTGCAGTTTGTCAAATGGGTGC
ATTCTTACATGCAGTTCGGTGATGTTCTGTAAAAACTAAAAAAAA-TGT-TGCTGGTAGTATAAGAAATTCAGACCGATA
GTTTTGCTTTTGCAGTTCACTGCTCCTCTCCAGGCAGCACGCTATATCC-TTTTTTCGGGTGTTCATACAAAAATGCAAG
ACTTAGTTTGTATATTATAG-AAAAAATCTAATGTGGTTCATTTGTATGAAGGCTTGTGGTTCGCTGTGTAAAAAGAAAA
GGAAAGAAAAACAAC-AATGTATCCCTTCTTTTGTAAGAGCACTTCACCTTGTCCTTGAGCCAAAACTAC-AAAAAAA--
-GCTGCCAAACAATATAAAAAATGTTGTAGTTCTCTTGACCGCGTCACGCAGTGCAAAACTCATTAAAACAAAAACAAAT
GTTGTAAAATAAAAAACAAAACAATGCAGTACACTAGCCTCCAAACAGAAACAAATGTTATAAAAT--AAAAAACAAAAC
AATGTAGTACACTAGCCTCAAGAATGCGGTCTAAATGCATTAGTAAAAAAGAGTCATGGAAAGAAAAAACTAATGCAGTA
CTCTCGGAATATCCACACAATTCAAAAAAAGAAAA--AGAAAATCCTTTTTTTAGAAGTTCACTCATGCGGTTCACTTTA
GGTAGTGTCGTGGCTCACTTACTCCCGATTTGAATTGCAAAAGACATGCTACAGAGACGAC-AAAAAAGGATTGTGGTTC
TTGCAAAATTTGCATCGACAAAGGAAATCATGAAGTTCACTTGACTGCCTGCTGCAATGCGGTTTTCTGTTTGAAGCAGT
GCGTTCTTATGTCCGATGAAAGGTCCACTCCCTTGGTAAATGCGCATCAAAATTTAATACGTATGAAAAAA-ATACAACA
AAAACTCATGAGGTTCACTTTTGATAGTGTTGCGGTTCATTTTTGGAAGTGTTGCGGTCCACTCTCATTCAA-AAAAAGT
TGAAAAAAAGACAACAAAAACTTTTGCGAGC-AAGTTTATGTCCGACAAAAAGAAATCATGAAGTTCACTTGGCTGCCTG
CTGC
>chr1A_1
GCCCCCTACGCCCACCACTCGACCACCTCTCTGTCTCTCTTCCTCCACCACCGACGCCTCCCCCAATTCCCCACCACCAA
CCACCTTCCTCTCCTCCCCCGGCGCCGCCCCCTCCAGCCTCATCCCTTAGCGCCGCCACCCTCCAGCCTCATCCCCTGGC
GCCGCCCCCCTCCAGCCTTATTCCCCTGGCTCCACCCC-TCCCCACCTCCCCTCCAGCCAACTTCCTAGCCACTGGCCGC
ACCAGTGCCGCGACGCTAGATGGCTGGCGCCGCGACGTCCCCGAACGGTACGCCTACCCTCCGCCACCCACGGCACCGTG
CGCAGGCGGTGGTGCCA---------------------------------------------------------------
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-----------------------------------------------------------------CCTCCAAGAAACCCT
-CCCCGACCTGCCGCTAGATGGGATCCGGTCCTCTAGGCGCCGGACCCAGGCCACATCGGGCCCCCGCGACGCCTCGCTG
CCGGAGCCAAGCCGCGACGGCCCCCACGTCGCCGCCCCACGTGCTCCCCCGACCTGCTCCCCCCACGCCGCCGCCCTA--
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-CCTGCTCCCCCCGAGCAGCAGGCTCGTCACGTCCCCC-GCCGGCCTTCCGTGCAGTCCAGCAACCACATCTGTGCAG-C
CACAGCCGCGCGGGCCGACCTCAAAAGCACCGGAGGCGAGCTGCCCTCCCCTCTCTCCTTTGCTTCTTCCTCCTCTCCCC
GCAAACTCCCTCCAGCGAGGTTTAGTACACGTCCATCCCCCGGCGGTTCGCGTGCAGTTCAGCCAGCGATGGCGTGTAGT
ATGGCGTACGACGGCATGCAGTTCCGCGACCCT-CCCATGCACCACGACAACGACGAGCAGCAACGTGGATGGGAGTGGA
CTGCATCCCACGTCGTACGTTCATGCAGCAAGCCACCACCCCACACCCTGTGGTCTGCTCCCTCGCCAGTGGTGGATCCA
AGCTCATATGCGCCCATGCAGTCCACTGCATCCGTGAAGGTCACCGGAGCTCATCT----------------GCTCCTTT
GTTCTTCAGTATGCAGTTTGGTTCTCTTTTTTGCTTTCAAATTTA-TTGTATGCCGAAGTGCAGTTTGTCAAATGGGTGT
ATTCTTGCATGCAGTTCGGTGATGTTCTGTAAAAACAAA--TTTTTTTGCTGCTGGTAGTATAAGAAATTCAGACCGATA
GTTTGCCTTTTGCAGTTCACTGCTCCTCTCCAGGCAACACGCTATATCC--TTTTTCGGGTGTTCATACAAAAATGCAAG
ACTTAGTTTGTATATTATAG-AAAAAATCTAATGTGGTTCATTTGTATGAAGGCTTGTGGTTCGCTGTGTAAAAAGAAAA
GGAAAGAAAAACAATGA-TGTACCCCTTCTTTTGTAAGAGCACTTCACCTTGTCCTTGAGCCAAAACTAC-AAAAAAAAG
AGCTGCCAAACAATATAAAAATA-TTGTAGTTCTCTTGACCGCGTCACGCAGTGCAAAACTTGTTAAAACAAAAACAAAT
GTTATAAAATAAAAAACAAAACAATGCAGTACACTAGCCTCAAAACAGAAAGAAATGTTATAAAATAAAAAAAACAAAAC
AATGTAGTACACTAGCCTCAAGAACGCGGTCTAAATGCATTAGTAAAAAAGAGTCATGGAAAGAAAAAACTAATGCAGTA
CTCTTGGCTCATCCACACAATTCAAAAAA-GAAAAAGAAAATCC---TTTTTTAGAAGTTCACTCATGCGGTTCACTTTA
GATAGTGTCACGGCTCACTTACTCCCAATTTGAAGTGCAAAAAACAAGTTACAGATACAAC-AAAAAAAGATTGTGGTTC
TTGCAAAATTTGTATCGACAAAGGAAATCATGAAGTTCACTTGACTGCCTGCTGCAGTGCGGTTTTCCGTTTGAAGCAGT
GCATTCTTCTGTCCGATGAAAGGTCCACTCGCTTGGTCAACGCGCATAAAAATTTAATAAGTATGAAAAA--ATACAACA
AAAACTCATGAGGTTCACTTTTGATAGTGTTGCGGTTCATTTTCGGAAGTGTTGCGGTCCACTCTCGTTCAATTTTTT-T
TGAAAAAAAGACAACAAAAACTTTTGCGAGC-AAGTTTATGTCCGACAAAAAGAAATCATGAAGTTCACTTGGCTGCCTG
CTGC
>chr3D_2
-CCCCC-ACGCCCACCACTCGACCACCTCTCTGTCTCTCTTCCTCCACCACCGACGCCTCCCCCAATTCCCCACCACCAA
CCACCTTCCTCTCCTCCCCCGGCGCCGCCCCCTCCAGCCTCATCCCCCGGCGCCGCCACCCTCCAGCCTCATCCCCCGAC
GCCGT-CCCCTCCAGCCATCTTCCCCTGGCTCCGCCCCCTCCCCACCTCTCCTCCAGCCAACTCCCCAGCCACTGGCCGC
ACCAGTGCCGCGGCACTAGACGGCTGGCGCCACGACGCCCCCGAACGGTGCACCTACCCTCCGCCACCCATGGCACAGTG
CGCAGGCGGCGGTGC-----------------------------------------------------------------
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------------------------------------------------------------------CTCCAAGCAACCCT
-CCCCGACCTGCCGCTAGATGGGATCCGGTCTGCTAGGCGCCGGATCCAGGCCACATCGGGCCCCCGCGACGATCTGCTA
CCGGAGCCAAGCCGCGACGGCCCCCCGCGTCG------------TCGCCCCACCTGCTCCCCCCACGCCGCCGCCCCACC
TGCTCTACCCGCGCCGCCGCCCCACCTGCTCCCC-CGAGCTGCCCCTGCTCCGGCCCTGGCACTGCCCCTGCCCTCCGTC
TCCTGCTCCCCCCGAGTAGCAGGCTCGTCACGTCCCCC-GGCGGCCTTCCGTGCAGTCCGGCGACCACATCTGTGCAG-C
CGCAGCCGCGCGGGACGACCTCAACAGCACCGGTGGCGAGCCGCCCTCCCCTCTCTCCTTTGCTTCTTCCTCCTCTCCCC
GCAAACTCCCTTCGGCGAGGTTCAGTACATGGCCAT-CCCCGGCGGCTCGCGTGCAGTTCAGCCAGCGACGGCGTGTAGT
ATGGCGTACGACGGCATGCAGTTCCGCGACCCT-CCCGTGCACCACGACAACGACGAGGAGCAACGTGGATGGGAGTGGA
CTGCATCCCACGTCGTACGTTCACGCAGCAAACCACCACCCCGCACCCTGCGGTCTGCTCCCACGCCGGTGGTGGATCCA
AGCTCATCTACGCCCATGCAGTCCACTGCATCCGTGAAGGTCACTGGAGCTCATCTT----------------CTCCTTT
GTTCTTCATTATGCAGTTTGGTTCTCTTTTTAGCTTTCAAATTTA-TTGTGTGCCGTAGTGCAGTTTGTCAAC-GGGTGT
ATTCTTGCATGCAATTCGGTGATGTTCTGTAAAAACTACAA-TTTTTTGCTGCTGGTAGTATAAGAAATTTAAACAGATA
GTTTGCCTTTTGCAGTTCACTGCTCCTCTCCAGGCAGCACGCTATATCC-TTTTTTCGGGTGTTCATACAAAAATGCAAG
ACTTAGTTTGTATATTATAGAAAAAAATCTAATGTGGTTCATTTGTATGAAGGCTTGTGGTTCGCTGTGTAAAAAGAAAA
GGAAAGAAAAACAAC-A-TGTAGCCCTTCTTTTGTAAGAGCACTTCACCTCGTCCTTGAGCCAAAACTAC-AAAAAAAAG
AGCTGCCAAACAATATAAAAAATGTTGTAGTTCTCTTGACCGCGTCACGCAGTGCAAAACTCGTTAAAACAAAAACAAAT
GTTATAAAATAAAAAATAAAACAATGCAGTACACTAGCCTCAAAACAGAAACAAATGTTATAAAAT--AAAAAACAAAAC
AATGCAGTACACTAGCCTCGAGAATGCGGTCTGAATGCATTAGTAAAAAAGAGTCATGGAAAGAAAAAACTAATGCAGTA
CTCTTGGCTCATCCACACAATTCAAAAAAAGAAAAAGAAAATCC---TTTTTTAGAAGTTCACTCATGCGGTTCACTTTA
GGTAGTGTCGCGGCTCACTTACTCCCGATTTGAAGTGCAAAAAACATGTTACAGAGACGAC-AAAAAAAGATTGTGGTTC
TTGCAAAATTTGCATCGACAAAGGAAATCATGAAATTCACTTGACTGCCCGCTGCAGTGCGGTTTTCCGTTTGAAGAAGT
GCGTTCTTCTGTCCGATGAAAGGTCCACTCGCTTGGTCAACGCGCGTAAAAAATTAATAAGTATGAAAAAA-ATACAACA
AAAACTCATGAGGTTCACTTTTGATAGTGTTGCGGTTCATTTTCGGGAGTGTTGCGGTCCACTCTCGTTCAAAAAAAAGT
TGAAAAAAAGACAACAAAAACTTTTGCGAGAAAA-TTTATGTCCGACAAAAAGAAATCATGAAGTTCACTTGATTGCCTG
CTG-
>chr2D_778
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---------------GCAGCAGGCTTGTCACGTCCCCCCAGCGGCCTTCCCTGCAGTCCGGCAACAACATCTGTGCAGTC
CGCAGCCGCGCGGGACGACCTCGGCAGCACCGGAGGCGAGCCGCCCTCCCCTCTCCCCTTTGCTTCTTCCTCCTCTCCCC
GCAAACTCCCTCCGGCAAGGTCTAGTACACGTCCATCCCCCG-TGGCTCGTGTGCAGTTCGGCCAGCGATGGCGTGCAGT
ACGGCTTACGACGACATGCAGTTCCGCGAGCCTTCCCATGCGCCACAACAACGA---GCAGCAACGCGGCTCGGACTGGA
CTACATCCCACATCGTAGTTTCACGCAGCAAACCACCACCCCGCACCCTGTGGTCTGCACCCTCGCCGGCGGTGGATCCA
AGCTCATCTGCACCCATGTAGTCCACTGCATCGGTCAAGGTCGACGGAGCCCAAAATTAAAGCGGCGATGCAGCTCCTTT
GTTCTTCAATATGCAGTTCGGTTCTCTTTTTTGCTTTCAAATTTATTTGTATGCCGAAGTGCAGTTTGTTAAT-AGGTGT
A-TCTTGCATACAGTTCGGTGATGTTCTGTAAAAACTACAATTTTTTTGCTGCTGGTAGTACAAGAAATACAAACCGGTA
GTTTGCCTTTTGCAATTCGCTGTTCCTCTCTGGGCAGCACTCTATATCC-TTTTTTTGAGTGTTCATACAAAAATGCAAG
ACTTAGTTTGTATATTATAGAAG-AAATCTAATGTGGTTCATTTGTATGAAGGCTTGTGGTTTGCTGTGTAAAAAGAAAA
GGAAAGAAAAACAACG-AAGAAGCCCTTCTTTTGTAAGAGCACTTCACCTCGTCCTTGTGTCAAAACTAGAAACAAAAAT
AACCGCCAAACAATATAAAAATTGTTGTAGTTCTCTTGACCGCGTCACGCGGTGCAG-ACTAGTTAAAACAGAAACAA-T
GTTATAAAT-------------------------------------------------------AT--TAAAAACAAAAC
AATGCAGTACACTAGCCTTGAGAGTGCGATCTGAATGCATTAGTAAAAAAGGAGTCAAGAAAAT-ACAACTAATGCAGTA
CTCTTGGCTCATCCACACAATTCAAAAAAAGAAAA--AAAATCC---TTTTTTAGAAGTTCACTCATGCGGTTCACTTTA
GGTAGTGCCACGG-------------------------------------------------------------------
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>SNPs
-----------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS---------------------------------------------------------------
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-------------------------------------------------------------------------S------
S---------------------------------------------------------------------S---------
--------------------------S-S-----------S---------------------------------------
----------S-----------S-----------S-----------------------S--S---------S---S-S--
-------------S----------------------------------S----------------------------S--
-------------------------------S--------------------S---------------------------
-------------------------------------------S------------------------------------
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-----------------------------------------------------------------S--------------
------------------------------------------------------------------------S-------
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-------------------------------------------------S------------------------------
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--S--S--------------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------S-----------------------------------------------------
------------------------S--------------------------------S-S--------------------
---------------------------------------------------S----------------------------
----------S------------------------------------------------------------S--------
----------------------------------------------------------------------------S---
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>forward_912
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-------------GACGACCTCAACAGCACCA------------------------------------------------
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>reverse_2171
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----------ATCCGATGAAAGGTCCACTCG-------------------------------------------------
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