>input_sequence_83469
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------------------------------------------------------------------ATGGCGCCATCCCC
GGCCGCCGCCGTGAATACGACGAGAGCGACGTGCGTGCTGTTGATCCTCCTCCTGTTGGCCGACGGGCGGTCGACGCCTG
TGGCTGGGCAGGCGCTACCTGCGCCTGAGGAGGCCGCCACGATCGAGGCGGATGCCGACGGCCGTGGCAATGGCACCCGC
GGCGGCAGCAGGAGCGCCGGGACGACGAAGGAGTTGAGCGCCATCGACTGCCAGGTCTGCGAGTCGACGTGTCGGGTCAA
GTGCCTCGTCAACAACCTCTTGCAGTGGGGCAGCTGCTACCAGCACTGCAAGGCCGACAACTGCAACGAGTGGTGTAGGT
AG------------------------------------------------------------------------------
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-------------------------------------------
>chr1D_1_TraesCS1D01G432100
GCACTTCACCACCTCCACGCCAGAGGGGAGCCGGCCACGGATCCATTGCCACATGAAGATTCTAATTTTGAGGGGCACGC
GGATGGACCATATAGACTCGAGGACAACCGGTCCAGGAGAGGGAGCAATGGCTCGGTATAGGGACTTCGTGGAGAAGCGG
CCAGAGGGCTCAAGACGCCAGGACAGACGGTCGTCGTGGGCTGCGCCAGGTCCGGCTCATGGAGAGCCACGGCATCAAGG
AGCTCGTGCCAAGCGGTAACCTCCGGTGCCCAAATGGCCGCCGGAACGCGAGACGCCCTAAGTCAATAAGGGCCGACTCG
ACGAAGATCCTAGGTTCGACCGCAATGGAGAAGAGGTCTGGGAACCTGGCAGCGAGGAAGATCCCCAGCCCAGCGGTCGA
ACCAAAATATTGTGGATGTTCCAGTACCGACCGTGGCTCATCAGATTTAGAGGATTCCGACGGAATTTTGACCAACGGTG
TTTTCCCCTATATTTAGCATCCG-TTTCATAGGCATGGAGATACTAGATTCCTAAGGATT--------------------
-----GGGTTCTTAGCATCAGGTAAGACCTCATGAAGATATCTGAACGATTGAAGTGATCATGGCATTCCAATTC-----
---TTTTCTTATTCTATCATGTAAACC-AAACAAGCACCTATTG------------------------------------
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----------------------------------------------------------------------------GGTA
AACCCAT-AAAAATGCACACATTCTCACTGTGGTTTGAGTTGCTTTTTAATTTTATTCAGGGAATGTATGTACAAATTGT
AACTTGTAATTGGGACGTGGGATATCATTTGTTTGTTCTTCACCAGTATC------------------------------
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---AATCATGCCATGATACGTGTGACTCAACCACCTTCCACCAACACAGGTCCGCGGCCGTTGCCATCACGCACAAAGCA
CCAGGTCCAGGAATCACAAGGTACAAAATCGCCCGCGCACTACA----CCCTCTCTTCGCGCGCGCCACCACACATCGTC
GTCGTAGTCACACTG-CACAGACCGGACGTACGTACACACAAACCCTCACACGAGAAGACCGATCCATGGCGCCATCCCC
GGCCGCCGCCGTGAATACGACGAGAGCGACGTGCGTGCTGTTGATCCTCCTCCTGTTGGCCGACGGGCGGTCGACGCCTG
TGGCTGGGCAGGCGCTACCTGCGCCTGAGGAGGCCGCCACGATCGAGGCGGATGCCGACGGCCGTGGCAATGGCACCCGC
GGCGGCAGCAGGAGCGCCGGGACGACGAAGGAGTTGAGCGCCATCGACTGCCAGGTCTGCGAGTCGACGTGTCGGGTCAA
GTGCCTCGTCAACAACCTCTTGCAGTGGGGCAGCTGCTACCAGCACTGCAAGGCCGACAACTGCAACGAGTGGTGTAGGT
AGCCCTCCGTCGAGCTAGCGAGCCGGCGGATTCATGACACGCACATGGATCCATGGATGTATCACGAGGATGTTCG-TTT
TTGCGATTCAACTTGTTGCTTTTTTTTGACGTGGATCCATGAATACAACCAGTCAGCCTCTCTATGTTCTTTTTCATTTT
TATTACATTCACCAAATATATATACTCAACACAAAAGTCATTTGTACACACTTATTCTCTATGGGTTGAACACATTGAAA
ATGCACGCTGTTCTTAGTGTAGTTTGAGTTATTGTTCTTTTCCATGAGAACATATGCGCAAATTATACTTCACACTTCAA
TACAAGGTTTGCCACACACGGCCCCAACGATACAAGGTGTTAAAAAAATTCTCTTACAAAACAGATCAAAGAAAAGAAGC
AAACAACAAAGAAAGCAGCGCGAAGCAGTGCCCAGGGAGAGGACAAATGTGCACCACCGATTTGCCGCCGAGCATAGGCA
TAGGAGTGCATCTGCGAAGACCAACCCGAGCGACTTTGTGTCCCCTAGGGGAGCCACCGCACCTTGTCCCGAAGTCCTTG
CCACATGGTCGCGGGAAAGGGCCACCTGCCCTCTCGCCACGGGGCATGGAGCGCCGATCCTGCTAACATACAACGCGAAC
CGAGGATGTCAATCGCGAGATCGCGTGTAAAATATAGGAGACCGACGAAACCACTCCGCCCAGGTCAAAGAAACTTCTCA
TGATCCAAGCCTACACAAAGATGTTTCCTCGCCGAGACCAAAAGGGACATGAGCTCCACAATTGGACCTGAGCCTGAACG
GGAGGCACCGGCGAGGGAGCCCCAACTCTAGAGCAGAGACGAGATGGCCGCAACCTCCCTGGTGGTAGTCACCCATATCT
AGGTTGGTGACCCCCACCCCGCCTTGGATCTGACAGGGTCAGGCTCCTCGGTTGGCGGCCCTACACGAAAGGCGGAGTAA
AACAGGTGCGAGACCTCCTAGCCACGTTCATTGATCTACAGGT
>chr1B_435
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----------------------------------GGCTCATTAGATTTAGAGGATTCCGACGGAACTTTCACCAACGGTG
TTTTTCTCTATATTTAGCATTCGCTTTCATAGGAATGGAGACACTAGGTTCCTAAAGATTGCATTCATATTGGCCTGATT
TCTAAGGGTTCTTAGCATCAGGTAAGACCTCATGAAGATATCTCAACTAATGAAGTGAACATGGCATTCCATTTT-----
--TTTTTCTTATTCTACCATGTAAACCCAAACAAGCACATATTAGGTAAGGGTGTGGCTAGGTCTTAGTCGACCGGGATT
TTAACTAAGTCTCAGTCAAGTGACATAACATACAAGGGGGAGAGAAAAGAAACTA----ATTTTTTTACACGGATCTCAA
TGTAACATCTCGCTGATATAGCATCGACTGAGACTTAACGAAGTCTCAATCGACTGAGACATAGCAAGCCCGGTTGGGTA
AAACCACAAAAAATGCACACGTTCTCGTTGTGGTTTGAGTTGCTA------TTTATTCGGGGAATGTATG-----ATTGT
AACTTGTAATTGGGACGTGGGATATCATTTGTTTGTTCTTCACTAGAATC------------------------------
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---AATCATGCCATGAAACGTGTGACTCAACCACCTTCCACCAACAAAGGTCCACGGCCGTTGCCATCACGCACAAAGCA
CCAGGAATCACACGTAC--------AAATCCCCCGCGCACTACATGCACCCTCACTTCACGCGCGCCACCACACATCGTC
GTCGTAGTCGACATTACACAGACCACACGTACGTACACACAAACCCTCGCACGAACCAACCAATCCAT------------
GGCCGCCGCCGTGAAGACGACGAGAGCGACGTGCGTGCTGCTGATCCTGCTCCTGCTGGCCGACGGGCGGTCAAGGCCCG
TGGCTGGGCAGGCTCCACCGGGGCCCGAGGAGGCCGCGACAATCGAGGCGGATGCGGACGGCCGTGGCAACGGCACCCGC
GGCGGCAGCAGGAGCGACACGACGGCGAAGGTGTTGAGCACCATCGACTGCCAGGTCTGCGAGTCGACGTGCCGGGTCAA
GTGCCTCATCAACAACCTCTTGCAGTGGGGCAGCTGCTACCAGCACTGCAAGGCCGACAACTGCAACGAGTGGTGTAGGT
AGCCCTCCGTCGAGCTAGCGAGCCGGCGGATGCATGACACGCGCATGGATCCATGCATGGATCACGAGGACGTTCGTTTT
TTGCGATTCAAGGGTTGCTTT-----------------------------------------------------------
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>chr1A_435
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----------------------------------GGCTCATTAGATTTAGAGGATTCCGACGGAACTTTCACCAACTGTA
TTTTTCTCTATATTTAGCATTCG-TTTCATAGGAATGGAGACACTAGATTCCTAAAGATTGCATTCATATTGACCTGATT
TCTAAGGGTTCTTAGCATCAGCTAAGACCTCATGAAGATATCTCAATGACTTAAGGGAACATGGCATTCAATTTGTAATT
TGTTTTTCTTATTCTATCATGTAAACC-AAACATGCACCTATTGGGTAAGGGTGTGGTTAGGTCCTAG------------
---------------TCAAGTGACATAACATAAAAAAGAGAAAAAAAAGAAACTAAAACATTTTTTTACACGGATCTCAA
TGTAACATCTCGCGGACATAGCATCGACTGAGACTTAATGAAGTCTCAATCGAC--AGACTTAGCAAGCCCGATTGGGTA
AACCCAT-AAAAATGCACACGTTCTCGTTGTGGTTTGAGTTGCT------TTTTATTCGGGGAATGTATGTACAAATTGT
ATC-------TGGGACGTGTGATATCATTTGTTTGTTCTTCACTAGAATGACGTATGATATCATTTTTATCAGTTAATTC
AAGATTTTCATTAAGAAAAAATCTCATTGCAAAGCATCAATGCTTCCTTCATAACCCTTGTCGCAAAGAAAGATTCTCCT
TTAAACACCAATGACTACAGACCCATTTCTCTGCGTAACTGCACCATCAAAATCATCACAAAACTCCTTGCCAACAGGTT
CCAAACAGTAATATTAAAGTTGGTGCATAAAAATTAGTATGGTTTTATCAAACAAAGAACTATTCAGGACTGCCTGGGAT
GGGCTTTTGAATATCTCCACCAATGTCATCAGTCAAAAAGACCCATTATAGTGCTCAAATTGGACTTTGAAAAGGCATTT
GGCTTAATTGAGCATAAAACAATAATTTCTATTCTAAAAGCAAGAGGCTTTGGTGACAAGTGGATCAACTGGATGAACAT
GATCTTCTCCTCTGGCAGTTCCTCTGTTCTTCTAAATGGTGTGCCAGGAAAAGTTTTCTTCTATAAGAAAGGAGTAAGAC
AAGGTGATCCTTTATCCCCCCTCGTATTTGTTCTAGCAGTAGACATCCTCCAATCCATCCTGAATGAAGCCATGAGAAAT
AACCTTATCAATCCTCCAATCCCTAGTCAAGTCTGTCCTGAATTCCCAGTAATCCAATATGCAGATGATACCATCCTTGT
CTTACTTGCCCAGTTAGTGCAACTTGCTCATATTAAAAACCTTCTTCTACACTTCACTGCTTTCACTGGTCTCAAGGTGA
ATTATGAGAAATCGATCATGGTTCCAATCAATGTACCTGAAGATGAACTGCCCAGTCTGCTGTCACTTCTTGGTTGCAAG
TGTGTAAGCTTTCCTTTCTTCTATATTACAGAGGATTGACATAAGGTTGTCTGGATGCTCAACACTTTTATCTTATGATG
GTAGATTGCTTCTGATTAAGTCAGTGTTTGCTTCACTGCCAATTTTCTACATGAGCACAATGGCTCTTCTAGCAGGAGTT
ATTGAGTAGCTTAACAAATTCCTCATGCGGTTCTTTTGGAGAAAATAGAGGAGGGGGGCACAACACTTATTTCCTGGCAG
AAAGTTTGCAAGCCCAAAATGCAGGGATGACTTGGCATTCTAGATATTGCAACCCACAATAAGGCACTTCTCATGAAGAA
TTTACATAAGTTCCTAAATTTGGCAGATATTCCTTGGGTTAATCTGATTTGGGGGATGACTTGGCATTCTAGATATTGCA
ACCCACAATAAGGCACTTCTCATGAAGAATTTACATAAGTTCCTAAATTTGGCAGATATTCCTTGGGTTAATCTGATTTG
GGAAAAGCATTATCAACATGGGCCACCAACTGATGCTAGGGTTGGGTCCTTCTGGTGGAAAGCACACATCTCTCTTCTGG
GTGATTTTAAGAATATTATGGAATGTAAGGTTGTCTCAGGTGCTACTGCTCTATTGTGGCAGGACAAGTGGATGGGTGAG
CCACTATACATCCAATTTCCACAGCCTCATTCCTTCTCCACAAATCATTCTATCTCTGTCCAACATTATCATGCGGCAGA
TGATGGTATAGACAACTTCCAACTTCCATTATCAAATCAAGCCTTCAATCAACTTTAGCAGCTGGATAATCTTTTCCCAC
GGTTGACAAATTCTGCAAATGATCAATGGAGCCATGAAGGGAAGGCTAATTTGTCCTCCATCAGAGTTTACAACAGCTTG
ATCCCAAACTCGGAGGAGCACCCAATTTTCAAGATGATTTGGAAAAGTAAAAACAGACTGAGACACAAGATTTTCTTCTG
GTTAGCTGCCCATGAGAGAATAAACACTAGAGCCTTGCTTCAAAGGAAAGGAATGCACTTAGATAACCCTCATTGCCCAA
ACTGTAGGCAGAGTGCTGAAGAGACAGTAATACACCTTCTGTGGGGCTGCACTTTTGCTCAGGACTGCTGGAATTCACTA
ATTCCTGGTAAGAAAAGAGGCACATCACTTTATGAAGAATTTCTCCTTGCATCAGAACATCTACCCAAGAAATTTTCCTC
AGAAATTATAATTCTTGGATGTTGGAAAATTTGGACCCAAAGAAATGGCAAAGTATTTAGAGGTCTGCAGCAGACACTTC
GAAGTTGGAGATATTTCCTTAAGCAGGATCTGAATCTGCTTCAACTCAAAATCAAGGAAAAGCATATTGGCAGTTTCAAG
CTCTGGATCGGTAATAATTTGTAACATGTTTGGTTCTTTACCTAGAGAAGGTGTAGGTTGATTTATTTTTTCCCTTTGGC
CTCCTGGAGGCTTGTATTTGTGCTCATTATTTGGCTAAATATAACACCGTAGAACAATTGTTCTACGGTTTACAGGTCGA
AAAAATCATGCCATGAAATGTGTGACTCAACCACCTTCCACCAACACAGGTCCGCGGCCGTTGCCATCACGCACAAAGCA
CCACGAATCACACGTAC--------AAATCCCCCGCGCACTACA----CCCTCACTTCGCGCGCGCCACCACACAACGTC
GTCGTAGTCAACATTACACATACCAGAAGTACGTACACACAAACCCTCACACTAGAAGACCGATCCATGGCGCCATCCCC
GGCCGCCGCCGTGAAGACGACGAGAGCGACGTGCGTGCTGTTGATCCTGCTCCTGTTGGCCGACGGGCGGTCGAGGCCCG
TGGCTGGGCAGGCGCCACCGGCGCCCGAGGAGGCCGTGGCAATCGAGGCGGATGCCGACGGCCGTGGAAACGGCACCCGC
GGCGGCGGCAGGAGCGCCGGGACGCCGAAGGAGTTGAGCGCCATCGACTGCCAGGTCTGCGAGTCGACGTGTCGGGTCAA
GTGCCTCGTCAACAACCTCTTGCAGTGGGGCAGCTGCTACCAGCACTGCAAGGCCGACAACTGCAACGAGTGGTGTAGGT
AGCCGTCCGTCGAGGTAACGCGCCGACGGATGCATGACACGCGCATGGATCCTCTA------CAAGAGGATGTCCGTTTT
CTGCGATTCATGGTGTTGCTTT----------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S-----------------------S---S----------
----S-S-------------S------------S-------S-------------S------------------------
-------------------------------------------S-----S--------S------------S--S-----
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--------------------S-----SS----------------SSSSSS--------S---------------------
-------------------------------------------S--S---------------------------------
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----------------S---------------------------------------------------------------
-----SSSSSS-SSS--SSSSSSSS-----S----------------------S--------------------------
----------SSS-S---------S-------------------------------------------------------
---------------S--------------------------------S-------------------------S---S-
---------------S---S-----S-----------S--S-----------------------------S---------
------------------------S-------------------------------------------------------
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-------------------------------S----------S------------S---S--------------------
-----------SS---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_112
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------------TAGACTCGAGGACAACCGGT------------------------------------------------
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>reverse_4561
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CGAGGATGTCAATCGCGAGA------------------------------------------------------------
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