>input_sequence_83451
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--------------------------------------ATGGATCAGACGGAGGCTGGCCGCACAATCCCCAAGTTCGGC
GCCTGGGACGTGAACAACCCGGCCTCCGCCGACGGGTTCACGGTCATCTTCAGCAAGGCCAGGGATGATAAGAAGGCCCC
CGTCAACGTGCACAAGGCCAGCAAGTCCGCCGACGGCAAGGACGCCAGGCCCGACTCCAAGATGAACCAATCCTACAGCA
ACTCCAGGCCCAACACTTCGGTAC-------------TTCTTCTTCTTCTTCTTCTTCCTCCTCTCTCTCAAGAGAT---
----------TCATTCTTTCCCATCTGATATTGCAGAAGAAATGGTTCTGCTGCGTGTCGCCGAGCCCCACGCAGCCTTG
A-------------------------------------------------------------------------------
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>chr6B_1_TraesCS6B01G316100
CGTGGGGAAGAGATGAGCATCTCCTCATGACAGATTTCTCTTTTTTCTTTCTTGATGTATGTTTCGAATTTTGATCTGAA
TTTTTTAGGGGTTATCTTAATATGTGCTGTGAACATGCTTGATTTTTTTCATATTTTTTCGCAATGTTTAAATTTAAATT
CCGGCCGCAAGGCACACGGTAACATGCAAACGTGCATGTCACCTGATCTCTGTCCCATCTCGTGATCGCTCACGCAAAGC
TTCAAGATTCCATTACATATATAGATTACATTGTACAATATATCGCCAATTGGCGATGGGTGAACAGTAACTAGCTAGTA
GCCTAGTAGCCAGGTACATATATACACGAGACACAGTAGGAAGAAAATGTAGGATATCACTTCTCTTTTTCTTTTCATGG
CCGTAGTGTAATCCTATATTCCTATGGCAGGAACAATTTTTTGAATTTTTTTTGGTGCCCTTTCTTGGATTGTAGTAGAA
AGATTACAAGATGACAGTATGAATGTGTGCTTCTCTTGTATTTCATCCGAAACCAGGTTCCAGTGACGTTAATTTGCATT
TAACATGCGGCGCAAGGCCGGCCACGAGGACCCTAGGCCGTTTTGCTGCCTCCGAAACCAGAGCCTCCGTGTT-AAAAAA
AGGTAGC----------------------------------------------CAACGTCCCACGCAGAGCATGCATGAG
ATTAGCGGGTATAA--------GTGCCGTTGCG---------ATCTTCTCCTCCTGCTATATTTGACCGCCTTCCCTCTC
ATCCCGGGGGAAATTTTGCCCCGAA------GCGCTTCATATCCATTCAAGGGGGCAAAATTTTCTCTCGCGTCTACCGC
TCAAGGGCACCGCGCCACCCCGTCAAGGC--AAAACATGTCGGTGAGTTGATAAAGATCCTATGTGAATTTACGTCTATG
GATTCGTCCATCTCTGGTTCATCTTGTTTGCACTGCCTTGATTGATCATAT---ATGGATCTTCTTTTAATGTCGTCGCA
AACAAATAATGTGATGATG---CATTTGAAACAAGAAAATGGATCAGACGGAGGCTGGCCGCACAATCCCCAAGTTCGGC
GCCTGGGACGTGAACAACCCGGCCTCCGCCGACGGGTTCACGGTCATCTTCAGCAAGGCCAGGGATGATAAGAAGGCCCC
CGTCAACGTGCACAAGGCCAGCAAGTCCGCCGACGGCAAGGACGCCAGGCCCGACTCCAAGATGAACCAATCCTACAGCA
ACTCCAGGCCCAACACTTCGGTAC-------------TTCTTCTTCTTCTTCTTCTTCCTCCTCTCTCTCAAGAGAT---
----------TCATTCTTTCCCATCTGATATTGCAGAAGAAATGGTTCTGCTGCGTGTCGCCGAGCCCCACGCAGCCTTG
AGCCAGGAGGAGGATGATGATGAAGAGGCGG---GGATCGGGCGGAGTGTCGCGCGAATGCGAATGCGATGGGATGGAGG
AGAGGGGAGTGTCAATGCCGCTGCTTCGTTTATAAACAAACGTACTACTATCGCACATACACAAACACTTTGCCACTTCG
GGGATGAGATGAGATGAGACGATGTTGATGTAACTATGCGACGGTCGTACGTGGCCCTGTCGCCAGGCGTGATGTATGGC
TT-CCGCGTA-AGAAAGAAACTTGCTCATACCATGCGGATACATCT--------TTCAGATGTTCTCAGCCTCAAGGTGC
GTGCGTAAACTGGCTCACCTCATGTTCAGGCTGCTTGCACGACCCCATCCTGCCTGCCACCGGCAGCTTCAAGCCGAGAT
GCCCCGTTCGATGTGGAACCTGCCCTGCGCAACTACCAGATGACAGGGCT---AAG-CTATATGCAAAAATGATGATGCA
TCACTAGCTGTTAATCGTACGGGTGTAGA---------------------------------------------------
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----------------------------------------GAATACCGCATCACTGTCGCAGCTGTCCAATAACATTGGA
AGTTCAGAGCCGTGTAAATAGATTGTTTCAAAATGTT-ACTCATAGCAAGGCTCAAACCCAAACATTCCACATTCATGTC
TGTCCATCGTTGTCACG-CCGAATTCATTTCTAGATAGCCTGTAGGCAGAGCGACGACACAAAGCAAAGGGAAACGAGGG
TGACGAAATAAGGCAGGCTTCCGCTGTCCCTGCGGATGAAGAGGGCCTCGTAGACCGGGGCATTGATGACCACTATGGCC
ACACAGAGGACAGCCTGCAGAAACAAAGGTCCCAACCCTGCCGCGCCTTCGCGCAACACAACTCTGCCCAGCCCGAGCAC
CAAGCACACCAAGTTGAACAGCGCGATCGTGGTGATGATAACAAACATACCCGAGATGGGCCCGAACTCCATCTTACCCT
TCTTGTACCTCTCCAGAGCCTGCGACTCGTCCACCTTCACCGTCAGCTCGAATCCGGACTCGGAGACACCC
>chr6D_591
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------------------------------CCCTAGGCCGTTTTGCTGCCTCCGAAACCAGAGCCGCCGTGTT-AAAAAA
AGTTAGTAGGAGTAAACTAAATCCGCTGGGAAATGTGCTTAATTTTAGGCAGGCAACGTCCCACGCAGAGCATGCATGAG
ATTAGCGGGTATAAGTGGGCGGGTGCCATTGCG---------ATCTTCTCCTCCTGCTATATTTGACCGCCTTCCCTCTC
ATCCCGGGGGAAATTTTGCCCCGAA------GCGCTTCATATCCATTTAAGGGGGCAAAATTTTCTCTCGCGTCTACCGC
TGAAGGGCACCGCGCCACCCCGTCAAGACATAAAACATGTCGGTGAGTTGATCAAGATCCTGTGTGAATTTACGCCTATG
GATTCATCGATCTCTGGTTCATCTTGTTTGCACTGCCTTGATTGATCATAT---ATGGATCTTCTTTTAATGTCGTCGCA
AACAAATAACGTGATGATG---CATT-GAAACAAGAAAATGGTTCAGACGGAGGCTGGCCGCACAATCCCCAAGTTCGGC
GCCTGGGACGTGAACAACCCGGCCTCCGCCGACGGGTTCACGGTCATCTTCAGCAAGGCCAGGGATGACAAGAAGGCCCC
CGTCAACGTGCACAAGGCCAGCAAGTCCGCCGACGGCAAGGACGCCAGGCCCGACTCGAAGATGAACCAATCCTACAGCA
ACTCCAGGCCCAACACCTCGGTACTCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCTCTCTCAAGAGATC--
-----------CATTCATTCCCATCTGATATTGCAGAAGAAATGGTTCTGCTGCGTGTCGCCGAGCCCCACGCAGCCTTG
AGCTAGGACGAGGATGATGATGATGAGGAGGAGGGGATCGGGCGGAGTGTCGCGCGAATGCGAATGCGATGGGACGGAGG
AGAGGGGAGTGTCAATGCCGCTGCTTCGTTTATAAACAAACGTACTACTATCGTACATACACAAACACTT-GCCACTTCG
GG-----GATGAGATGAGACGATGTTGATGTAATTATGTGATGGTCGTGCGTGGCCCTGTCGCCAGGCGTGATGTATGGC
TT-CGCATAAGAGAAAGAAACTTGCTCATACCATGCGGATACATCTGCTTTCCTTTCAGATGTTCTCAGCCTCA-GGTGC
GTGCGTAAACCGGCTCACCTCATGTTCAGGCTGCTTGCACGACCCCATCCTGCCTGCCACCGGCAGCTTCAATCCGAGAT
GCCCCGTTCGATGTGGAATCTGCCCTGCACAACCACCAGATGATAGGGCT---AAAAGTATATGCAAAAATGATGATGCA
TCACTAGCTGTTAATCGTATGGGTGTAGA---------------------------------------------------
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----------------------------------------GAATACCACATCGTTGTCGCAGCTGTCCAATAACA-TGCA
AGTTCAGAGCCATGTAAATAGATTGTTTCAAAATGTTTACTCATAGCAAGGCTCAAACCCAA-CATTCCACATTCATGTC
TGTCTATCGTCATCACGCCCGAATTCATTTCTAGATAGCCTGTAGGCAGAGCGACGACACAAAGCAAAGGGAAACGAGGG
TGACGAAATAAGGCAGGCCTCCGCTGTCCCTGCGGATGAAGAGGGCCTCGTAGACCGGGGCATTGATCACCACTATGGCC
ACGCAGAGGACAGCCTGCAGAAACAGTGGCCCCAGCCCTTCCGCGCCTCCGCGCAACAGAACTCTGCCCAGCCCGAGCAC
CAAGCACACCAGGTTGAACAGCGCGATCGTGGTGATGATCACAAACATACCCGAGATGGGCCCGAACTCCATCTTCCCCT
TCTTGTACCTCTCCAGAGCCTGCGACTCATCCACCTTCACCGTCAGCTCGAATCCGGACTCGGAGACGCCC
>chr6A_591
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------------------------------CCCTAGGCCGTTTTGCTGCCTCCGAAACCAGAGCCGCCGTGTTAAAAAAA
AGGTAGTGGGAGTAAACAAAATCCGCTGGGAAATGTGCTTAATTTTAGCCAGGCAACGTCCCACGCAGAGCATGCATGAG
ATTAGCGGGTATAAGTGGGCGGGTGCCGTTGCGATCCCCCCAATCTTCTCCTCCTGCTATATTTGACCGCCTTCCCTCTC
ATCCCGGGGGAAATTTTGCCCCGAAGCACTTGCGCTTCATATCCATTCAAGGGGGCAAAATTTTCTCTCGCGTCTACCGC
TCAAGGGCACCGCGCCACCCCGTCAAGGCAT-AAACATGTCGGTGAGTTGATCAAGATCCTGCGTGAATTTACGCCTATG
GATTCATCGATCTCTGGTTCATCTTGTTTGCACTGCCTTGGTTGATCATACTACATGGATCTTGTTTTAAT---GTCGCA
AACAAATAATGTGATGATGGTGCATT-GAAACAAGAAAATGGCTCAGATGGAGGCTGGCCGCACAATCCCCAAGTTCGGC
GCCTGGGACGTGAACAACCCGGCCTCCGCCGACGGGTTCACGGTCATCTTCAGCAAGGCCAGGGATGACAAGAAGGCCCC
CGTCAACGTGCACAAGGCCAGCAGGTCCGCCGACGGCAAGGACGCCAGGCCCGACTCCAAGATGAACCAGTCCTACAGCA
ACTCCAGGCCCAACACCTCGGTACCTT----------TTCTTCTTCCTCTTCTTCTTCCTCACCTATCTTAAGAGATTCA
AGAGATTCATTCATTCATTTCCATCTGATATTGCAGAAGAAATGGTTCTGCTGCGTGTCGCCGAGCCCCACGCAGCCCTG
AGCCAGGACACTGAGGAAGAGGAGAAG--GG---GGATCGGGCGGAGTGTCGCGCGAATGCGAATGCGATGGGATGGAGG
AGAGGGGAGTGTCAATGCCGCTGCTTCGTTCATAAACAAACGTACTACTATCGTACATACACAAACACTT-GCCACTTCG
GG-----GATGAGATGAGACGATGTTGATGTAATTATGCGACGGTCGCACGTGACCCTGTCGCCAGGCGCGATGTATGGC
TTTCGCATAAGAGAAAGAAACTTGCTCATACCATGCGGATACATCTGCTTTCCTTTCAGATGTTCTCAGCCTCA-GGTGC
GTGCGTAAACT-------------------------------CCCCATCCTGCCTGCCACCGGCAGCTTCAAGCTGAGAT
GCCCCGTTCGATGTGGAACCTGCCCTGCAGAACTACCAGATGATCGTTAGGGAAAAACTATATGCAAAAATGATGATGCA
TTAGTAGCTGTTAATCGCATGGGTGTAGAGAATACCACAGCGTTTTTTTTTTTTTTGAATTGAGGGGCATGCCCCCGATT
TTATTTCATTGCATGAAAGGAAACCAATAAAACAGATCAAGTATTCTTCAGATTCCATCCAGCCCTCAGATGTCCTACCA
TGACATCCAGGCATCAGCAACTAGACAACCAAGAGAATAAAGCTTGCAACTAAGAAAAAACTCCATACTTATCAGAAATG
CATACCTAGGTGAGAGGTAACCACACAGGGCTCCTCTCCCCCACTCATCGCCACATACTCTCCAGGGAGGACAGAAATTC
AGCTAACATTACAGACAAAATTACTCCCCGATGTCAAGACGTTTCACCATGGGCGCCCATCCTCTGCTCTTGTTGAAGAA
ACCATTCGCAACATCAACCAGCAGTGTTGCGACGGCCCGCAACATCTGTTGCCCTTCTTTTCTCTGTAGACCAGCCCAGT
AAGACATCCAATAAGATATTTGAAAGAACAACACACTAGGATCATAAGGGTAAACATGATGAAATGTAGCAGCATTTCTG
GCTTTCCACAAAGTCCAAAACACCGCAGAAACACCCACTGCTATTGTTTGCCTACTATTCTTAGGATTTTTTTTTACCCA
GGCAGTAAACTCTTCTATCTTGCATGGAATGTCATGAATTCCAGTTACATTCCTAACCACACCCCACACAAACTTAGCCA
CCACACATGTACAGAAAAGATGATCAACCGTTTCTGGGTAATCACAGAAACTACAGTTTTTATCCTTTCCTTTCCAGTTT
CTTTTCGCCAAATTGTCTCTAGTTAGGACACTATTCTTAAACATCAACCACAAGAAAACTTAACTTTCAGCGGTATCCTC
GCCTGTCACAATTTCCTATGAGGCCAGGCAGCCTGATCCGTTTTTAAAGCAAGATACAAAGATCTAACCGTGAATCTACC
AGATTTAGTTAGCAGCCAACTACATCTATCCTCTTGATCGTTTAAAACTACTTTACTGCATAGATTTTTGAGCTCATACC
ACATATCAGCCGTGTCTCCCCATAAAACTCTTCTAAATCTAATCAAACTCATATTATCAGACAGAACTTTGGCGACAGTG
AAATCTGAATTAAAGGTTAGTAGATAGAGTCTAGGGAACTGAATACCACATCGTTGTCGCAGCTGTCCAATAACA-TGGA
AGTTCAGAGCCGTGTAAATAGATTGTTTCAAAATGTT-ACTCATAGTAAGGG----------------------CATGTC
CGTCTATCGTTATCACG-CCGAATTCATTTCTAGATAGCCTGTAGGCAGAGCGACGACACAAAGCAAAGGGAAACTAGGG
TGACGAAATAAGGCAGGCTTCCGCTGTCCCTGCGGATGAAGAGGGCCTCGTAGACCGGAGCATTGATGACCACTATGGCC
ACACAGAGGACAGCCTGCAGAAACAAAGGTCCCAACCCTGCCGTTCCTTCGCGCAACAGAGCTCTGCCCAGCCCGACCAC
CAGGCACACCAGGTTGAACAGCGCGATCGTGGTGATGATCACAAACATACCCGAGATGGGCCCGAACTCCATCTTCCCCT
TCTTGTACCTCTCCAGAGCCTGCGACTCGTCCACCTTCACCGTCAGCTCGAATCCGGACTCGGAGACGCCC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------S--------------
------S-------------------------------------------------------------------------
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----------------------------------------------------S--------S------------S-----
-----S--S-----------------------------------------------------------------------
--------------------------S---------------S-------------------------------------
--------------------------------------------------------------------S-----------
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----------------S---------------------------------------------------------------
----------------S---------------------------------------------------------------
--------S--------------S----S---------------------------------------------------
-----------------------------------------------------S----------------S---------
--SSSSS--------------------------S----------------------------------------------
----SSSSS-----------------------------------------------------------------S-----
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----------------------------S--------------S-----------S------------------------
-------------------S------------------------------------------------------------
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-----------------------------------------------S----SS---------------------S----
--------------------------------------------------------------S-----------------
----S------S--------------------------------------------------------------------
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----------------------------------------------------------S---------------------
-----------S---------------------------S-----------------------------------S----
-------------------------------------------------------------------S---
>forward_308
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------------------------------------------------ATTGGCGATGGGTGAACAGT------------
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>reverse_3116
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---------------------------------------------------------------------------TTGGA
AGTTCAGAGCCGTGT-----------------------------------------------------------------
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