>input_sequence_83384
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--------------------------------------------------------------------------ATGGAG
TTCATCCCCGACAGCTGCTGGAACGCCGGGATGCCCAGCGCGCCGATGATGAGCTGCGGCCGGTTCCGCACGGCCAGCAG
GTTCCGGAACGTGCCGCGCACCGCCCGCGCCGCCTCGCTCGCCACCTTGAGGTCCTCGAACTCGGCGTCCACCTTGTGCG
TCCCGCGCACCTTCTCCAGCACGCGCCGGGCCTCCTCCAGCCGCCCGCGCTCCACCAGGCTGTTGGGCGTCTCCGGCAGG
AACAGCGCGCCGACGAAGATGGCGGTGGCGGGCACCACGGCGAGGCCCAGCGAGAGGCGCCACCCCCACGGGTGGATCCG
GTCGGTGAAGTAG-------------------------------------------------------------------
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-------------------------
>chr5A_1_TraesCS5A01G182700
ATACTATATCTCAAGATGAAGGTATGATCATTACGTTACCATGACATTCAGAACGAGA---------------CAACACA
CACATTCTCAGTGCATCAT------AGCGAGACGAGAGCACAACGTAATGTCACACGTAAACTTGCATGCTTTTGCACCT
GACCTCCGCCACCAGTTACACCTTCCGACAGACCGAATCCTAATCGAATTCGTAATAAGATTACTAAGACGTAATTAGGA
ACACGAGGTC-----TTGGACAAGTTAACACACACATGCAGTTCCTATA----GCACGACCTATGCACCTGCATTGTAAT
----GTAAATCTTATCGAAACACGCATCATGGATCGATCTATTCCGACGTAACGACGGGCTTGACGGCACCGGCGGCGGC
GGCGGCCATCTCCTGGCGGTGGTGGTGGCCCTGGTACTTGGGGTCCTTGGTGACGACCCGCTTCCAGTACCAGTGCTTGT
CGAAGAGCAGCCAGATCTCCTCGATGGGCACCTGCTTCGTCTCCGGCAGCAGCAGGACGACGAAGACGGACATGACCACG
ATGAGCGCCGCGAAGAGGATGAACACCCCCCACCGGAGGTGGCACATGGCCGCCAGGAAGCACTGCGCCACCGCCGCCGT
CCAGAAGAGGTTGACGCACACCACCACGCTCTGCCCCGCCGACCGCATCTCCAGCGGGAACAGCTCGCTGGGCACCAGCC
ACCCCAGCGGCCCCCACGACCACCCGTACGCCACCACGAACAAGCAGATGGCCACCACCAGCACCGTGCTCACGCCCTTG
GACAGCTCCTCCCCGTGCCCGAACTTGAGCGCCAGGATCGTCGCCACCACCACCATGGACGCGATCATCTGCGCCCCGGC
CTCCATGAAGAGCACCCGCCGCCCCAGCCGGTCCACCACCACCATGGACACCAGCGCGCCCACCACCAGCATCGACCCCG
TGATGATGGACGAGTAGAGCGCCGCCGAGGAGCCGAACCCGAGGCTCTGGAAGATGACCGGCGAGTAGAAGAGGATGGAG
TTCATCCCCGACAGCTGCTGGAACGCCGGGATGCCCAGCGCGCCGATGATGAGCTGCGGCCGGTTCCGCACGGCCAGCAG
GTTCCGGAACGTGCCGCGCACCGCCCGCGCCGCCTCGCTCGCCACCTTGAGGTCCTCGAACTCGGCGTCCACCTTGTGCG
TCCCGCGCACCTTCTCCAGCACGCGCCGGGCCTCCTCCAGCCGCCCGCGCTCCACCAGGCTGTTGGGCGTCTCCGGCAGG
AACAGCGCGCCGACGAAGATGGCGGTGGCGGGCACCACGGCGAGGCCCAGCGAGAGGCGCCACCCCCACGGGTGGATCCG
GTCGGTGAAGTAGTTGATGACGTTGGCGACGAGGATGCCGAGGCAGGTGGTGAGCTGGAAGAGCTGGTTCACGGCGCCGC
GGATCCTGAAGGGCGCGATCTCCGACAGGTAGAGCGGCACGGCCTGGTTGCCGAAGCCGATGCCGACGCCGAGGAGGACG
CGGCCGACGATGAGCATGGCCACGTTGACGGCGGCGGCGTTGACGGCGCCGCCCAGGAAGAAGCTGACGGCGCCCACCAT
GATGCTGCCGCGCCGGCCGTGGCGCTTGGTCACGTAGGAGGCCCCGAAGGTGGACACCAGGCCGGCGAAGTAGAGCGAGG
AGGTGAAGAGCGTCAGCACCTGGTTGTCGTACTTGCAGTAGTCCGTCTCGTGCAGGTGTGCGTGCTTCCGGTTGTACACG
TCCGGGAAGAACTTGATCAAGAAGTCGTCCATGGAGGTCACGCCACCTGCGCTCATCGTTCACCACCAGCGTCCATGAAA
CC--------ATGATTAGTT-----ACCACTCTTGTTCTCGTGTCAAGTAA-----ATCAGTGCGATGAAGAAATATACT
CTACATCACATTTCGGTGAAAGATAACTAACTGAAAACTACCGGTCATCCAGGAAAATTGGTTTTGTTACTTGAATCATG
CAATTCAACTTTTATGTGGTTTAGTGTGGACACTTCCC--TTTTTGTCATGGCAATCTACT-AATCTTGGGCGGAAACGA
GTTGTGCATACTG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TATAAGATGTGATACCTCTACTGAAAATGAGAGGACATTCCG
TGGCATGTTACTAATTCTACTCCCCAGGACAGCTCACAATCGTTAGAAATGGTTTCCGTCCAAAAAACAGATTAATTTCA
GTAGGTAAAGGAAGCAGTATTGACGCAGACACCGGGTGCCCACTCCAAACAAAACAAAAAGAAGATGGAGACACCATAAT
GGCCATTACGTTTTCA-TTTGGTACTCTTTTGGCCTATAGACAATGCGTCCTTTGTA-----AAGGAAAGCATTAACCAT
GATTGAGGCCATTAATTTTGATGAG
>chr5B_1
ATACTGTATCTCAACTTGAGGGTATGGTCATTACGTTACCATGACATTCACAACGAGATTAAAGAAAAATGCACAACACA
CAGGGTGTCAGTGCATCAT------AGCGAGACGAGAGCACAACGTAATGTCACACATAAACTTGCATGCTTTTGCATCT
GACCTTTGCCACCAATTACACCTTCCGACAGACCGAATCCTAATCGAACTCGCA----------TAAG----AAGTAAGA
ACACGAATTAAGTCTTTGGACAAG--AACACACACAAGCAGTTCC--TA----GCACGACCTATGCACCAA---TGCATT
----GTAAATCTTATTAAAACACGCATCATGTATCGATCTATTCCGACGTGACGACGGGCTTGACGGC---GGAGGCGGC
GGCGGCCATTTCCTGGCGTTGGTGGTGGCCCTGGTACTTGGGGTCCTTGGTGACGACCCGCTTCCAGTACCAGTGCTTGT
CGAACAGCAGCCAGATCTCCTCGATGGGCACCTGCTTCGTCTCCGGCAGCAGCAGGATGACGAAGATGGACATGACCACG
ATGAGCGCCGCGAAGAGGATGAACACCCCCCACCGGAGGTGGCACATGGCCGCCAGGAAGCACTGCGCCACCGCCGCCGT
CCAGAACAGGTTCACGCACACCACCACGCTCTGCCCCGCCGACCGCATCTCCAGCGGGAACAACTCGCTCGGCACCAGCC
ACCCCAGCGGCCCCCACGACCACCCGTACGCCACCACGAACAAGCAGATGGCCACCACCAGCACCGTGCTCACGCCCTTG
GACAGCTCCTCCCCGTGCCCGAACTTGAGCGCCAGGATCGTCGCCACCACCACCATGGACGCGATCATCTGGGCCCCGGC
CTCGATGAACAGCACCCGCCGCCCGAGCCGGTCCACCACCACCATGGACACCAGCGCGCCCACCACCAGCATGGAGCCCG
TGATGATGGAGGAGTAGAGCGCCGCGGAGGAGCCGAACCCCAGGCTCTGGAAGATGACCGGCGAGTAGAAGAGGATGGAG
TTCATGCCCGACAGCTGCTGGAACGCCGGGATGCCCAGCGCGCCGATGATGAGCTGCGGCCGGTTCCGCACGGCCAGCAG
GTTCCGGAACGTGCCACGCACCGCCCGCGCCGCCTCGCTCGCCTCCTTGAGGTCCTCGAACTCGGCGTCCACCTTGTGCG
TCCCGCGCACCTTCTCTAGCACGCGCCGCGCCTCCTCCAGCCGCCCGCGCTCCACCAGGCTGTTGGGCGTCTCCGGCAGG
AACAGCGCGCCGACGAAGATGGCGGTGGCGGGGACGACGGCGAGGCCCAGCGAGAGGCGCCACCCCCACGGGTGGATCCG
GTCGGTGAAGTAGTTGATCACGTTGGCGACGAGGATGCCGAGGCAGGTGGTGAGCTGGAAGAGCTGGTTCACGGCGCCGC
GGATCTTGAAGGGCGCGATCTCCGACAGGTACAGCGGCACGGCCTGGTTGCCGAAGCCGATGCCGACGCCGAGGAGGACG
CGGCCGACGATGAGCATGGCCACGTTCACGGCCGCGGCGTTCACGGCGCCGCCCAGGAAGAAGCTGACGGCGCCCACCAT
GATGCTGCCGCGCCGGCCGTGGCGCTTGGTCACGTAGGAGGCCCCGAAGGTGGACACCAGGCCGGCGAAGTAGAGCGACG
ACGTGAAGAGGGTCAGCACCTGGTTGTCGTACTTGCAGTAGTCCGTCTCGTGCAGGTGCGCGTGCTTCCGGTCGTACACG
TCCGGGAAGAACTTGATCAAGAAGTCGTCCATGGAGGTCACACCACCTGCGCTCATCATTCACCACCATCGTTCGTCCAT
GC--------ATGATTAGTT-----ACCACTCTTGTTCTCGTGTCAAGTAA-----ATGAGTGTGATCAAGAAATGT---
-TACTTTACATTTCAGTGAAAGAAAACTACTTAAAAACCACCC---------GAAAATTGGTTTTGTTACTCCAATCATG
CAATTCAACTTTTCTGTGGTTTAGTGTGGACACTTTTGTTTTGTTATTATGACCATCTACTAAATCTTCGGCGAAAACGT
GTTGTACATACTATGGGGGTGTTTGGTTGAGAAGTCCTAGGACTTTTTCTAGTCCCAGGGACTAATCAAAAAAGACTCTC
TAGTAGAGTCTTTTTCTAGTCCCTGTAAAAAAAGTCCCTCCCGTTTGGTTCCTAGGGACTTTTTAGGGACTTTTTCTAGT
CTCTGGGACTAAAAAGTCCCTGAACCAAACACCCCCTATATAAGATGTGATACCTCTACTGAAAATGAGAGGACATTCCG
TGGCATGTTACTAATTCTACTCCCCATGACAGCTCACAATCGTTAGAAATGGTTTCCATCCAAAAA-CAGATTAATTCCA
GTCGGTGAAGGAAGCAGTATTGATGCAGACACCGGGTGTCCACTCCAAACCAAACAAAAAGAAGATAGAGACACCATAAT
GGCCATTACGTTTTGA-TT----ACTCTTCTGGCC--TAGACAATGCGTCCTTTCTG-----AAGGAAAGCATTAACCAT
GATTGAGGCCATTAATTTTGAT---
>chr5D_2
-TACTGTATCTCAAGTCGAGGATATGATCATTACGTTACCATGACATTCACAACGAGATTAAAGAAAAATGCACAACACA
CACAGTGTCAGTGCATCATAGCGATAGCGAGACGAGAGCACAACGTAATGTCACACATAAACTTGCATGCTTTTGCATCT
GACCTCCACCACCAGTCACACCTTCCGACAGACCGAATCCCAATCGAATTCGTAATAAGATTACTAAG----GCGTAAGA
ACACGAGGTC-----TTGGACAAGTTAACACACACAAGCAGTTCC--TATATAGCACGACCTATGCACCCACCAATGCAT
TGTAGTAAATCTTATTAAAACACGCATCATGGATCGATCTATTCCGAGGTGCCGACGGGCTTGACGGCACCGGCGGCGGC
GGCGGCCATTTCCTGGCGCTGGTGGTGGCCCTGGTACTTGGGGTCCTTGGTGACCACCCGCTTCCAGTACCAGTGCTTGT
CGAACAGCAGCCATATCTCCTCGATGGGCACCTGCTTCGTCTCCGGCAGCAGCAGGATGACGAAGATGGACATGACCACG
ATGAGCGCCGCGAAGAGGATGAACACCCCCCACCGGAGGTGGCACATGGCCGCCAGGAAGCACTGCGCCACGGCCGCCGT
CCAGAAGAGGTTCACGCACACCACCACGCTCTGCCCCGCCGACCGCATCTCCAGCGGGAACAGCTCGCTCGGCACCAGCC
ACCCCAGCGGCCCCCACGACCACCCGTACGCCACCACGAACAAGCAGATGGCCACCACCAGCACCGTGCTCACGCCCTTG
GACAGCTCCTCCCCGTGTCCGAACTTGAGCGCCAGGATCGTCGCCACCACCACCATGGACGCGATCATCTGCGCCCCGGC
CTCGATGAACAGCACCCGCCGCCCCAGCCGGTCCACCACCAGCATGGACACCAGCGCGCCCACCACCAGCATCGACCCGG
TGATGATGGAGGAGTAGAGCGCCGCGGAGGAGCCGAACCCCAGGCTCTGGAAGATGACCGGCGAGTAGAAGAGGATGGAG
TTCATGCCGGACAGCTGCTGGAACGCCGGGATGCCCAGCGCGCCGATGATGAGCTGCGGCCGGTTCCGCACGGCCAGCAG
GTTCCGGAACGTGCCGCGCACCGCCCGCGCCGCCTCGCTCGCCTCCTTGAGGTCCTCGAACTCGGCGTCCACCTTGTGCG
TCCCGCGCACCTTCTCCAGCACGCGCCGGGCCTCCTCCAGCCGCCCGCGCTCCACCAGGCTGTTGGGCGTCTCCGGCAGG
AACAGCGCGCCGACGAAGATGGCGGTGGCGGGGACCACGGCGAGGCCCAGCGAGAGGCGCCACCCCCACGGGTGGATCCG
GTCGGTGAAGTAGTTGATGACGTTGGCGACGAGGATGCCGAGGCAGGTGGTGAGCTGGAAGAGCTGGTTCACGGCGCCGC
GGATCTTGAAGGGCGCGATCTCGGACAGGTAGAGCGGCACGGCCTGGTTGCCGAAGCCGATGCCGACGCCGAGGAGGACG
CGGCCGACGATGAGCATGGCCACGTTCACGGCCGCGGCGTTCACGGCGCCGCCCAGGAAGAAGCTGACGGCGCCCACCAT
GATGCTGCCGCGCCGGCCGTGGCGCTTGGTCACGTAGGAGGCCCCGAAGGTGGACACCAGGCCGGCGAAGTAGAGCGACG
ACGTGAAGAGCGTCAGCACCTGGTTGTCGTACTTGCAGTAGTCCGTCTCGTGCAGGTGCGCGTGCTTCCGGTTGTACACG
TCCGGGAAGAACTTGATCAAGAAGTCGTCCATGGAGGTCACGCCACCTGCGTTCATCGTTCACAACCAGCGT--------
CCCATCGTCCATGATTAGTTACTCCACCACTCTTGTTCTCGTGTCAAGTAA-----ATCAGTGTGATCAAGAAATGTACT
CA------------------------------------------TCATCCAGGAAAATTGGTTTTGTTACTCCAATCATG
CAATTCAACTTTTATGTGGTTTAGTGTGGACTCGTCGTTTTTTGGTACCG----------T-AATCTTAGGCGAAAACGT
GTTGTA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CTCTACTGAAAATGAGAGGACATACGG
TGGCATGTTACTAATTCTACTCCCCGGGACAGCTCACAATCAATATAAATGGTTTCCATCCAAAAA-CAGATTAATTTCA
GTAGGTAAAGGCAGTAGTCTTGAT-----------GTGTCCACTCCAAACAAAACAAAAAGAAGATAGAGACACCATAAT
GACCATTACGTTTTCATTT----ACTCTTTTGGCC--TAGACAATGCGTCCTTTCTAGTAGAAAGGAAAGCATTAATCAT
GATTGAGGCCATTAATTTTGATGAG
>chr5A_427
--------------------------------------------------------------------------------
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------------------------------------------------------------CTTCCAGAACCCGTGCTTGC
TCCAGAGCAGCACCATCTGCTCGATGGGCACGCCCTTGGTCTCCGGCAGGAAGACGTAGACGAAGGCGGTCATGACGGCG
ATCCACGCAGCGAAGAAGATGAAGATGGCGAACTTGAAGGCGCAGAGCAGCGACAGGAACGCCTGCGCGATGATGAAGGT
GAAGAAGAGGTTGACGGCCACCGTGATGCTCTGCCCCGCCGACCGCGTCTCCAGGGCGAAGATCTCGCTCGGCACCGTCC
ACCCCAGCGGCCCCCACGACCACCCGAACGCGAGCATGAAGAGGCAGATCACGAACACCACCGCGATCGAGCAGCCCCGG
GATAGATGCTTGTCTGCGTCGAACTTCACCGCCAGTATCGCCGCCACGATCACCTGGCAAATGATCATCTGGATGCCGCC
GCTGATGAGCAGCTTCCTCCTGCCAAGCCGGTCGACGGTGGCGATTGAAATGAGTGTGGAGAACAAGAGCACGGCGCCAG
TGAGCATGGAGGAGTATAGGGACCAGCTGGCGCCGAAGCCCATGCTCTGGAACAGCACCGGCGCGTAGAAGAGGATGGAG
TTTATGCCCGTCAGGACCTGGAATGCCGGCATGCACACGGCCATCACC---AGCTGCGGCCGGTTGCGCCGCTCCAGGAT
GTTCCGGAACGGGTGCTTGATGGTGTTGGCCAGTTCACTCGCCTCCGCCATGTCCGTGAACTCGGCGTCGACATCCGCGG
TTCCTCGGATCAGCTCCAGCACACGCCGACCCTCCTCGACGCGCCCGCGCTCGATGAGGCTGTTCGGCGTCTCGGGGAGG
AGGATCCCGCCCACCGTCATCAGCAGCGCCGGCGCTGCCACAAGACCAAGCGAGAGACGCCAACCCCACGGCTTGATTTT
TTGCGTGCCATAGTTGATCATGTTCGCCGAGAAGATGCCAAGCGTCGTCGCGAGCTGGAACATCATGTTCAGCCCGCCGC
GGAGGTGCGCCGGCGCCATCTCCGACAAGTACAGCGGCACAGCCT-----------------------------------
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>chr5D_427
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------------------------------------------------------------CTTCCAGAACCAATGCTTGC
TCCAGAGCATCACCATCTCCTCGATGGGCACGCCCTTGGTCTCCGGCAGGAAGACATAGACGAAGGCGGTCATGACGGCT
ATCCAGCCAGCGAAGAAGATGAAGATGGCGAACTTAAAAGCACAGAGCAGCGACAGGAACACCTGCGCAATGACGAAGGT
GAAGAACAGGTTGACGGCCACCGTGATGCTCTGCCCCGCCGACCGCGTCTCCAGCGGAAAGATCTCGCTCGGCACCGTCC
ACCCAAGCGGACCCCACGACCACCCGAACGCGAGCATGAAGAGGCAGATCACGAACACCACCACGATCGAGCAGCTCCGC
GACAGCTGCTTGTCCGCACCGAACTTTACCCCGAGGATCGCCGCCACGATCACCTGGCAAACGATCATCTGGATGCCGCC
GCTGATGAGGAGCTTCCTCCTCCCGAGGCGGTCGACGGTGGCGATGGAAATAAGCGTGGAGAACAGGAGCACCGCGCCGG
TGAGCATGGAGGAGTAGAGGGACCAGTCGGCACCGAAGCCCATGCTCCGGAACAGCACCGGCGCGTAGAACAGGATGGAG
TTGATTCCCGTCAGGGTCTGGAACGCCGGCATGCACACGGCCATCACC---AGCTGCGGCCGGTTACGTCGCTCCAGGAT
GTTCCGGAACGGGTGCGTGATAGTGTTGGCCAGTTCACTCGCCTCCGCCATGTCTGTGAACTCAGCGTCGACGTCCGCGG
TGCCGCGGATCAGCTCCAGCACGCGCCGGCCCTCCTCGACACGCCCGCGCTCGATGAGGCTGTTTGGCGTCTCCGGGAGG
AGGATCCCACCGATCGTCATCAGCAGTGCTGGCGCCGCCACGAGGCCCAGCGAGAGGCGCCACCCCCACGGTTTGATTTT
CTGCGTGCCGTAGTTGATCATGTTCGCCGAGAAGATGCCAAGCGTTGTCGCGAGCTGGAACATCATGTTGAGCCCGCCGC
GCAAGTGCGCCGGCGCCATCTCGGACAAGTAGAGCGGCACAGCCT-----------------------------------
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>chr5B_427
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------------------------------------------------------------CTTCCAGAACCAGTGCTTCC
TCCACAGCAGCACCATCTCCTCGATGGGCACGCCCTTGGTCTCCGGCAGGAAAATGTAGACGAACACGGTCATGACCGTG
ATCCAGGCGGCGAAGAAGAGGAAGATGCCGAACTTGAAGGCGCAGAGCATGGACAGGAACGCCTGCGCGATGACGAAGGT
GAAGAAGAGGTTGACGGCCACCGTGATGCTCTGCCCCGCCGACCGCGTCTCCAGCGGGAAGATCTCGCTCGGCACCGTCC
ACCCCAGCGGCCCCCACGACCACCCGAACGCCATCACGAAGAGGCAGATCACCACCACCACCACGATCGAGTAGCTCCGC
GACAGCTGCTTGTCCGTCCCGAACTTCACCCCGAGTATCACCGCCACGATCACCTGGCAAACGATCATCTGAATGCCGCC
GCTGATGAGGAGCTTCCTCCGGCCGAGGCGGTCGACGGTGGCGATGGAGATGAGGGTAGACAAGAAGAGCACAGCGCCGG
TGATCACGGAGGAGTAGAGCGACGCGCTGGCGCCGAAGCCCATGGTCTGGAACAGCACCGGCGCGTAGAACAGGATGGAG
TTGATGCCCGTCAGGATCTGGAACGCCGGCATGCACACGGCCATCACC---AGCTGCGGCCGATTGCGCGGCTCGAGGAT
GTTCCGGAACGGGTTCTTGATGGTGTTGGCTAGCTCGCTAGCCTCCGACATGTCCATGAACTCGGCGTCGACGTCCGCGG
TGCCGCGGATGCGCTCCAGGACGCGCCGGCCCTCCTCGGCGCGCCCGCGCTCGATAAGGCTGTTGGGCGTCTCCGGCAGG
AGCAGCCCGCCCACGGTCATCAGCAGCGCCGGCGCCGCCGCGAGGCCGAGCGAGAGGCGCCACCCCCACGGCTTGAGGTT
CTGCGTGCCGTAGTTGACCATGTTGGCCGTGAAGATGCCGAGCGTCGTCGCGAGCTGGAACATCATGTTCAGCCCGCCGC
GGAGGTGCGCCGGCGCCATCTCCGACAGGTACAGCGGCAC----------------------------------------
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>chr4A_427
--------------------------------------------------------------------------------
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------------------------------------------------------------CTTCCAGAACCAATGCTTGC
TCCAGAGCATCACCATCTCCTCGATGGGCACGCCCTTGGTCTCCGGCAGGAAGACATAGACGAAGGCGGTCATGACGGCT
ATCCAACCAGCAAAGAAGATGAAGATGGCGAACTTGAAGGCGCAGAGCAGCGACAGGAACAGCTGCGCAATGACGAAGGT
GAAGAAAAGGTTGACGGCCACCGTGATGCTCTGCCCCGCCGACCGCGTCTCCAGCGGAAAGATCTCGCTCGGCACCGTCC
ACCCAAGCGGACCCCACGACCACCCGAACGCGAGCATGAAGAGGCAGATGACGAACACCACCACGATCGAGCAGCTCCGG
GACAGCTGCTTGTCCGCACCGAACTTTACCCCGAGGATCGCCGCCACGATCACCTGGCAAACGATCATCTGGATGCCGCC
GCTGATGAGGAGCTTCCTCCTCCCCAGGCGATCGACGGTGGCGATGGAAATAATGGTGGAGAACAAGAGCACCGCGCCGG
TGAGCATGGAGGAGTAGAGGGACCAGCTGGCGCCGAAGCCCATGCTCCGGAACAGCACCGGCGCGTAGAACAAGATGGAG
TTGATTCCCGTCAGGATCTGGAACGCCGGCATGCACACGGCCATCACC---AGCTGCGGCCGGTTACGTCGCTCAAGGAT
GTTCCGGAACGGGTGCGTGATGGTGTTGGCGAGTTCACTCGCCTCCGCCATGTCTGTGAACTCAGCGTCGACGTCCGCGG
TGCCGCGGATCAGCTCCAGCACGCGCCGGCCCTCCTCAACGCGCCCGCGCTCGATGAGGCTGTTGGGCGTCTCCGGGAGG
AGGATCCCGCCGATCGTCATCAGCAGTGCTGGCGCCGCGACGAGGCCCAGCGAGAGGCGCCACCCCCACGGTTTGATTTT
CTGCGTGCCGTAGTTGATCATGTTGGCCGAGAAGATGCCAAGCGTCGTCGCGAGCTGGAACATCATGTTGAGCCCGCCGC
GCAAGTGCGCCGGCGCCATCTCCGACAAGTAGAGCGGCACAGCCT-----------------------------------
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-------------------------
>chr3D_974
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-----------------------------------------------TGAAAGATGACCAGAGAGTAGAACATGATGAAG
TTCATGCCAGATAGCTGCTGGAACTTTGGGATGTTCAGCGCGCCGATGATGAGCTGCGGCCGGTTCCGCACGTCCAACTG
GTTCGGGAACGTG-----------CCGCGCAGCCTCACCCTCCTCCTTGAGGTCCTCGAACCCCGCGTCCACCTTGTGCG
TCCCGCGCAGCTTCTCCAGCACGCGGCGCGCCTCCTCGAGCAGCCCGTGCTGGACGAGGA--TTGGGCGTCTCCGGCTAG
TACATCGCGCCGACGAAGGTGGCGGTGGCGGGGCCCATG----------GCGAGAGGCGCCAGCCCCACGGGTGGATACA
GTCGGTGAAGTAGTTGATCATGTTGGCGGCGAGGATGCCGAGGCAGGCGGT---------GAGCTGGTTCACGGCGTCGC
GGATC--------------------------------------CTGGTTACCGACGCCGATGCCGACGCCAAGGAGGA--
------ACGATGAGCATGGCCACGTTCACA---------------GCGGCGCCCAGGAAGAAGCCGACGGCGCCCGTCAT
GATGCTGCCGCACCGGCCGTGGCGCTTGGTCACGAAGGAGGCTCCGATGGTGGAGACCAGGCCGGTGAGGTAGAGCGAGG
AGGTGAAGAGCGTCAGCACCTGCTTGTCCTACTCC-------------CGTGCAGGTGCGCGTGCTTCCGGCTGTACACG
CCCGGGAAGAACTTGACCAAGAAGTCGTCCATGGATTCCACACCACCTGCGTTCATCAATCACCACCATCGT--------
CC--------ATGATTGGTT-----ACCACTCTTGTTCTCGTGTCAAGTACTGTAGATGCGTGTGATCAAGATTTATACT
TACTAGTACATTTCAGTGAAAGA---------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>SNPs
-----S---------S---S------------------------------S-----------------------------
----S-S-------------------------------------------------S--------------------S--
--------------------------------------------------------------------SSSS--S--S--
------------------------------------S--------SS----------------------SS-SS--S---
---------------SS---------------------------------S-----------------------------
---------S--------S-------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
----------S--------------S--------------S---------------------------------------
-----S--------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------S-----S--------S--------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
------------------------------------------------------------------------S-S-SS-S
---------------------------------------------------------------S---S------------
------S-------S--------S-----SS-S-----S---SS---------------------------SS-------
------------------------------------SS-------S-----S-S--------------S----S-----S
-----S------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S--------S-------------
-----------------------S--------------S---------------------------S-------------
-------------------SSSS------------SS-----------------S-------------------------
-------------------------
>forward_311
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------TAGCACGACCTATGCACCTG---------
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>reverse_1739
--------------------------------------------------------------------------------
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----------------------------------------------------------TGCGTGCTTCCGGTTGTAC---
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-------------------------
