>input_sequence_83310
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----------------------------------------------------------ATGGCGCCGTGGTTCACCAAGT
TTGATGTGGATAAATTTGATGGCACGGGTAACTTCGGTCTATGGCAGACAAGAGTGAAGGATATTCTAGCGCAGCAGGGA
ATCTTGAAGGGTTTGCAGGAGACGAAGCCGGCCAAGGTTGACAGCGATGCGTGGGAGAATATGCAAGTGCAGACGGCCGC
TACCATATGGCTTTATCTTGCGGATCAGATCATGTATCATGTCATGGACGAAGATACTCCTAAGGGAATTTGGGACAAGT
TGGCAAATCATTATATGTCCAAGCCAGTGACCAATAAGCTGTATTTGAAGCAAAAGTTCTATGGGATGAAGATGTAG---
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>chr2A_1_TraesCS2A01G452900
TTGTTGAAGACGTTGTGGAGGCAACGGATTTGGCTCGCGATCAGACCAGCGACCAGACGTGGGGGACAATCGGATAGATC
GGAGTGTGAGAGCATCGAGATGAT-------------------------------GCACTGCGGACGAATTGTGTCGGCG
ACGTGGATGGCCATGGTACGACACGGCTCGTGCACGGAAGATGCGCGAGGTGGCGACTGTTACGGCAAGGTTGGCGT-CG
GTGAGTACGCGCGACGGGGCAGTACAGATTGCTGGCGA-GAACCAAGGTTAGAGGTGACGACATGAGCTGT-TCGTCGGA
ACTAGCGGCGGATATTTTCTGATAAACGTGC--AATCGTGAAAAGGAAA--------GTTACGGCTGCTG---------C
GTACGAGAGACAG--CAGGCGCTGGGTTGCGT------------------------------------------------
------ACA-GCAACAGGTTTCCACGGATGATGTTTACCGTGCGTGCAAAGAAAGAAAAATCAGAAGTGATCTGATGTGT
TAGTGCAGGAGTCCAGGGGATGTATACATGCATGAGCAGTTTCAGAGGAA--------------CGTGTGCATGCGTA--
----TTTGGTCCAGAGGACAAGAGCTTGCATACACCGAGCGGTTATGATTAATATAAG------------GAAGGGATAT
GCACGTCCATGTTTGTCTATGAAATGGCATCA--------------GACTTGGTTTGATTCCGAAGAAACTATGACTATT
ATGG-----ACTCGATT--TCCGTGAAAGGCAAGGAAAATACAGGGCCAGGCGTCCAACAGGAAATAAAAGGCTAGGGTC
GACGAGGCTAGTAGGCA--CGACAGAAATTGTCTGCGAGTTAAGGGAAATGGTGGAGCGGACGAGTTGTTGTGGGCGG-A
ACTAATCTACACGTTGCGGCAAGAGGCTTCAAG-TGATTTTCCAAAGGGCGGACAGGAACGGTGCGAG--TCAAG--GTT
CTTGG-TGGATCACGGACTGCGGTGTGGCTTCAGACGAGGAATACGGGATCAGTGATCTTTTTCGTGAGGAGGTCGCAGA
GGAA---AA---GGGTGGTAAGACCGGCGGCAACAGGTTGGTTAGATCGCGGCTCGGCATGGCGCCGTGGTTCACCAAGT
TTGATGTGGATAAATTTGATGGCACGGGTAACTTCGGTCTATGGCAGACAAGAGTGAAGGATATTCTAGCGCAGCAGGGA
ATCTTGAAGGGTTTGCAGGAGACGAAGCCGGCCAAGGTTGACAGCGATGCGTGGGAGAATATGCAAGTGCAGACGGCCGC
TACCATATGGCTTTATCTTGCGGATCAGATCATGTATCATGTCATGGACGAAGATACTCCTAAGGGAATTTGGGACAAGT
TGGCAAATCATTATATGTCCAAGCCAGTGACCAATAAGCTGTATTTGAAGCAAAAGTTCTATGGGATGAAGATGTAGGAG
GGGTTGGATCTTGTGGAGCATGTGAATGCCTTCAATCAATTGGTCATGGATCTAGCGCATCTGGATGTGAAGATTGAGGA
CGAGGATAAGGCCTTACTTATTCTTGTTTCGTTGCCACCGTCCTATGAGTATTTGGTCATTACATTGACACATGGAAAGA
CAACCATCAATAATGAGGAACTCACTGCAGCGTTGCTTGGACATGAGTTGATGAAGCAAAAGAATGCTGCCG----AAAG
GGAGAGTA-CTCAAGGTTTGGGGTTGGCAGTTAAAGATTATCAACTCAGGAAGGGACAAGAGGCGGAGAAGAAAAAGAAG
AAA--GGTGCAGTGCTACAGGTGCAAGGACTGGGGACATATAGAGAGGGAATGCCCAGAACTGTGTTGGGGAACGTAGCA
ATAATTCAAA-AAAATT-CTACGTGTCACCAAGATCAATCTAGGAGATACTAGCAAC--GAGAGAGGGAGTGCATCTTCA
TACCCTTGAAGATCGCTAAGCGAAAGCGTTACAAGAATACAGTTGGTGGAGTCGTACACGCAGCGATTCAGATCGCGGTC
GATTCCGATCTAAGCG-CCGAACAACGACGCCTCCGTGTTCAACACAGGTACAGCCCGAGGACGTCTCCTCCTTCTTGAT
CCATCAAGGGGAGAGGAGAAGTTGAGGGAGAACTCCGACAGCACGACGGCATGGTGGTGATGGAGCTCGTGGTTCTCCGG
CAGGGCTTCGCCAAGCGC---AATGGAGGAGGAGGTGTAGGAAAGGG---GGGGCTGCGCCAGGGGAAGGGTGTGGCTGC
CCTCCCACCCC-----CCACTATATATAGAGGCAAGGGATA--GGGGG--CGGCCCCC-TCAGATCCCATCTAGGGGAGG
GGCGGTGGCCAGGGAGGGGAAACTTGCCCCCCAAGCCAAGGGGGGCGCCCCC-TTTAGGATTTCCCCTCAACCCTAGGCG
CATGGGCCCTAGGGGGGA--TGGCGCCCAGCCCACTTAGGGGCTGGTTCCCCTCCACATACAGCCCAT
>chr6B_2
-TGTTGAAGACGTTGCGGAGGCAACGGATTCGGCTCGCGATCAAACCGGCGACCAGACGTGGGGGGCGGCCGGATAGATC
GGAGTGTGAGAGCATCGAGATGATGCGCTCGGTGTTGTACAAGGACGGCGACGCGGCACTGCGGACGGATTGTGTCGGCG
ACGCGGGTGGCCAGGGTACGGCACGGCTTGTGCAGGGACGATGCGCGAGGTGGCGACTGTTTTGGCAAAGTTGGCGT-TG
ATGAGTATGTGCGACAGGGCTGTTCGG-TTGCTGGCGA-AACCCAAGAAACAAAGACCGGGAAGGCGAGCAGTCGTCGAG
ATGAGCGGCGAGGTTTT-CCCCGAGGTATGCGGAATCGAGAAAAGGAAT--------GTCAGGATTCGGTTGGTCGTGTC
GTAGGCGAGACGG--CCGCTGGAGCCTCGAGCAGGCGTGTGGCGGTTGGTCCCGGTAGAAGCACGGCGCGCAAGGCAAAG
AAAAGTCAAGGCAGCAGGTTTCATCGGATAGAGGGTAGTGC----ACAAGGAAAGAGAAT----------C-----GTGA
TGAGGCAGAAGTCCAGAGGTTTACATGGATGCTGTCAGCGGATCAAGTGATACG----TGCGTGGGTGTACATG------
-----TTGTTTCAGGGGACAAGTCTGCTACT---------GGTCATGATTAAACAAGA------------GACGTGTGCA
TGCATA---GGTCCGTGGG------------A--------------GACTTGGCTTGACAAGGCTGGGC-AAATCGTGAC
AGAGTTGAGTTGAACTCGGTTCGTGTGAGAGGAGGAAAAGAAGGGCCAGCTATATCCGGCGGAAATAAAGGGCTGGGGCG
A-CGAGGCTAACAGGGCAC----ACAATCAATCTGCAGGTTC-AGGAAAAGGTGGAGCGGCTAGTTTCGGCTGAGAGCAA
ATTCATCTGCGCGTTGCGGCAAGAGGCTTCAGG-TGATTTTCTGAAGGGCGGACAGGGAGGTTGTGCGGGTCAGTTTTTT
CTTGG-TAGATTGCGTTCTGCGGCGTGGTTTCAGACGAGGAATACGGGATCAGTGATCTTTTTCGTGAGGAAGTCGCAGA
GGAA---AA---GTGCGGTGAGACCGGCGGCAACAGGTCGGTTAGATCGCGGCTCGGCATGGCGCCAGGGTTCACCAAGT
TTGATGTGGAGAAATTCGATGGCACGAGTAACTTCGGTCTATGGCAGACAAGAGTCAAGGATATTCTAGCGCAGCAGGGA
ATCTTGAAGGGTTTGCAGGAGACGAAGCCGGCCAAGGTTGACAATGATGTGTGGGAGGATATGCAAG----GGCGGCCGC
TACCATACAGCTTTGTCTTGCGGATCAGGTCATGTATCAAGTCATGGACGAAGATACTCCTAAGGGAATTTGGGATAAGT
TGGCAAATCGTTATATGTCCAAGTCAGCGACCAATAAGCTGTATTTGAAGCAAAAGTTCTATGGGCTGAAGATGCAGGAG
GGGTTGGATCTTGTGGAGCATGTGAAAACCTTTAATCAATTGGCCACGGATCTAGCGCGTCTGGATGTGAAGATTGAGGA
CGAGGATAAGGCACTACTTCTTCTTGTTTCGTTGCCACCGTCCTATGAGCATTTGGTCATTACATTGACACATAGAAAGA
CAACCGTCAATAATGAGGAAGTCACTGCAGCGTTGCTTGGGCATGAGTTGAGGAAGCAAAAGAATGCTAC----AGA---
TGAGAGTA-CTCAAGGTTTGGGGTTGGCAGTTAAAGGTTATCAGATCAGGAAGGGACAAGAGGCGGAGAAGAAAAAAAAG
AAAAAGGTGCAGTGCTACAGGTGCAAAGACTGGGGACATATAAAGAGGGAATGCCCAGAACTG-----------------
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>chr5D_105
--------------------------------------------------------------------------------
-------------------------------------------------------GCACTGCGGACGGATTGTGTCGGCG
ACGCGGGTGGCCAAGGTACGACACGGCTCGTGCATGGACGATGCGCGAGGTGGCGACTGTTATGGCAGGGTTGGTGT-CG
GTGAGTACGTGCGACAGGGCTGAACAGATTGCTGGCGAAGAATCAAGATCAGAGATAA-GACATGAGCTGT-TCGTCGGA
ATTTACGGCGAGTTTTTTCCGAGGTGAACGG---ATCAAGAAAAGGAAA--------GTTACTG-TGCTG---------C
ATACGAGAGACGCGCCA------TGGTTGCGT------------------------------------------------
------GCA-GCAGCAGGTCTCCGTGGATGGCATGCATCGC----GCAAGGAAGGAGATAATCAGCAGTAC-----GTGT
TAGCGCAGGAGTCCAGGGGAT----ACATGCATGAGCGGTTAAAAAAAAGGAAAGATATGTGTGG---------------
----------CCAGGGGACAAGCCTACCTACACGAGA----GTTATGATTAAAATCTG------------GAAGTATGTG
CGCATA---CGTGTTCGGGTCTGTGCTGGTCTGGTGGACTTGCTTGGACTTTTGGAGATTCCTGGTAAACGGTGACATTT
C-AG-----ACTCGATT--TCCGTATCAGGCAAGGAAAAGTAGCGCCCGGGTGATCCAGCGGAAATAAAAGGCTGGCGAC
G--GAGGCTAGCAGGCA--CAACAGAAATTGTTTGCGAGTTCAGGGGAAA-GTGGAGCGGACGAGTTGCTGTGGGCGG-A
ATTAATCTGCGCGTTGCGGCAAGAGGCTTCAAG-TGATTTTCTGAAGGGCAGACAGAAAGGTTGTGTGGGTCATA--TTT
TTTGG-TAGATCGCGGACTGGGGCGTGGCTTCAGACGAGGAATACGGGCTTAGTGATCTTTTTCGTGAGGAGGTCGTAGA
GGAAAACAA---GGGCGGTAAGACCGGCGGCAACAGGTCGGTTAGATTGTGGCTCGACATGGCGCCAGGGTTCACCAAAT
TTGATGTGGAGAAATTCGATGGCACGGGTAACTTCGGTCTATGGCAGACAAGAGTTAAGGATATTCTGGCGCAGCAGGGA
ATCTTGAAGGGTTTGCAGGAGACGAAGCCAGCCAAGGTTGACAACGCTGCGTGGGAGGATATGCAAGTGCAGGCGGCCGC
TACCATACGGCTTTGTCTTGCGGATCAGGTCATGTATCATGTCATGGACGAAGATACTCCAAAGGGAATTTGGGACAAGT
TGGCAAATCGTTATATGTTCAAGTCGGCGACCAACATGCTGTATTTGAAGCAAAAGTTCTATGG-CTAAAGATGCAGGAG
GGGTCGGATCTTGTGGAGCATGTGAATGCTTTTAATCAATTGGTCACGGATCTAGCGTGTCTGGATGTGAAGATTGAGGA
CGAGGATAAGGCACTACTTCTTCTTGTTTCGTTGCCACCGTCCTATGAGCATTTGGTCATTACATTGACACATGGAAAGA
CAATCATCAATAATGAGGAAGTCACTGCAGCGTTGCTTGGACATGAGTTGATGAAGCAAAAAAAATGCTGCAGAAAG---
GGAGAGTACCTCAAGGTTTGGAGTTGGCAGTTAAAGGTTATCAGCTCAGGAAGGGACAAGAGGCGGAGAAGAAAAAGA--
-------TGCAGTGCTACAGGTGCAAGGACTGGGGACATATAAAGAGGGAATGCTCAGAACTG-----------------
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>chr5A_105
--------------------------------------------------------------------------------
-------------------------------------------------------GCACTACGGACGAATTATGTCGGCG
ACGTGGATGGCCAGGGTACGACACGGCTTGTGCAAGGACGATGCACGAGGTGGCGACTGTTATGGTAGGGTTGGCGT-CG
GTAAGTACGAGCGACGGGGCAGTACAGATCGCTGGCGA-GAATCAAGATTAGAGATAA-GGTGTGAGCTGT-TCGTCGGA
ATTTGCGGCGAGTTTTT-CCGAGGTGAACAG---ATCGAGAAAAGGAAA--------GTTACTA-TGCTG---------C
GTACGAGAAACGCGCCAGGCACTTGGTTGCGT------------------------------------------------
------GCA-GCAGCAGGTCTCCGTGGATGGCATGCATCAC----GCAAGGAAGGAAATAATCAGCAGTAC-----GTGT
TAGCGCAGGAGTCCA-GGGAT----ACATGCATGAGCGGTTCAAAAAAGATAGG----TGTGTGG---------------
----------CCAGGGGACAAGCCTACCTACACAAGA----GTTATGATTAAAATCTG------------GAAGTATGTG
CGCGTA---CGTGTTCGGGTCTATGCTGGTCTGGTGGACTTGCTTGGAC-TTTGGAGATTCCTGGTAAACGATGATAGTT
C-GG-----ACTCGATT--TCCGTATCAGGCAAGGAAAATTAGCGCCCGGGTGATCCAGCGGAAATAAAAGGCTGGCGAC
G--GAGGCTAGCAGACA--CAACATAAATTGTTTGCGAGTTCAGGGAAAAGGTGGAGCGGACGAGTTGCTGTGGGCGG-A
ATTAATCTGCGCGTTGCGGCAAGAGGCTTCAAG-TGATTTTTTGAAGGGCAGACAGAAAGGTTGTGAGGGTCATA--TTT
CTTGG-TAGATCGCGGACTGCGACGTGGCTTCAGACGAGTAATATGAGATTAGTGATCTTTTTCGTGAGGAAGTCGTAGA
GGAAAACAA---GGGCGGTAAGACCGGCGGCAACAGGTCAATTAGATCGCGGCTCGGCATGGCGCCGGGGTTCGCCAAAT
TTGATGTGAAGAAATTCGATGGCATGGGTAACTTCGGTCTATGGCAGACAAGAGTCAAGGATCTTCTGACGCAGCAGGGA
ATCTTGAAGGGTTTGCAGGAGACGAAGCTGGCCAAGGTTGACAATGATGCGTGGGAGGATATGCAAATGCAAGCGGCCGC
TACCATACAACTTTGTCTTGCGGATTAGGTCATGTATCATGTCATGGACGAAGATACTCCTAAGGGAATTTGGGATAAGT
CGGCAAATCGTTATATGTCCAAGTTAGCGACCAATAAGCTGTATTTGAAGCAAAAGTTCTATGGACTGAAGATGCAGGAG
GGGTCGGATCTTGTGGAGCATGTGAATGCCTTTAATCAGTTGGTCACAGATCTAGCGCGCCTGGATGTGAATATTGATGA
TGAGGATAAGGCGCTACTTCTTCTTGTTTCGTTGCCACCGTCCTATGAGCATTTGGTCATTACATTGACACATGGAAAGA
CAACCGTCAATAATGAGGAAGTCACTGCAGCGTTGCTTGGGCATGAGTTGAGGAAGCAAAAGAGTGCTAC----AGA---
GGAGAGTA-CTCAAGGTTTGGGGTTGGCAGTCAAAGGTTATCAGCTCAGGAAGGGACAAGAGGCGGAGAAGAAAAAGAAG
AAAAAAGTGCAGTGTTACAGGTGCAAGGATTGAGGACATATAAAGAGGGAATGCCCAGAACTG-----------------
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>chr1B_105
--------------------------------------------------------------------------------
-------------------------------------------------------GCACTGCGGACGGACTGTGTTGGCG
ACGCTGGTGGCCAGGGTACGACACGGCTCGTGCACGGACGATGCGCGAGGTGGCGACTGTTACGGCAGGGTTGACATACG
GTGTGCACGCGACAGGGCAAGTTATAGATCGCTGGCGAAGAACCAAGATCAGAGAC--------GGGAGCTGTCGTCGGA
TACGGCGGCGATCTTTT-TAGAGGCAAACGG---AATCGAGAAGGTCAGGCCTTTTGGTTGCGG-CGCTG---------C
GTACACGAGACGG--CGTACGGAGCCACGG--ACGCGTGTGGTAGTCGGTCTCGGAAATAACGGACGTAC--AGGCAAAG
GGCAAAGGA-TCAGCAGGTCTACTCGGATAAGGTGCAACACAA-------GGAACGAAAT----------C-----GTAC
TAGCGCAGGAGTCCAAGGGATTAACGAGCACGCGGCCAGCCGATAC--AA--------------GGTGTACATGCGTGTG
GATGTTTGGTCCAGGGGACAAGCCTACCGCT---------GGTTATATTGGAATAATAAAAAAGGAAGGTGACGTGTGCA
TGCAAACTGGGTCCATGTG------------A--------------GAGTTGTTTGACGAGGTCCTACCAAAATTGTGAC
AGGCCTGGACTTGGGTT--TCCGTGTACGAGAAGAAAAGATAGCACCCAGGTGAT-CAGCGGTAATAAAAGGCTGGCGAC
G-CGAGGCAGCGAAGGCACCAAAATAATTAGTCTGCAAGTTT-GGGAAGAGGTGGAGCGATTCGGCTACGGCAGATATCG
GTCTGTGTTAT------GGCGAGAGGCTCCACG-GCAATTTCTAAAGGGCGGACAGGGACGGTGCTAA-GTCAGA--TTT
CTTGG-TAGATCGCATACTACGGCGTGGCTTCAGACGAGGAATACGGGATCAGTGATCTTTTTTGTGAGGAAGTCGCAGA
GGAA---AA---GGGCGGTAAGACCGGCAGCAACAGGTCGGTTAGATCGCGGCTCGGCATGGCACTGGGATTCACCAAGT
TTGATGTGGAGAAATTCGATGGCACGGGTAACTTCGGTCTATGGCAGACAAGAGTCAAGGATATTCTGGCGCAGCAGGGA
ATCTTGAAGGGTTTGCAGGAGACGAAGCCGGCCAAGGTTGACAATGATGCGTGGGAGGATATGCAAGTGCAGGCGGCCGC
TACCATACGGCTTTGTCTTGCGGATCAGGTCATGTATCATGTCATGGACGAAGATACTCCTAAGGGAATTTGGGACAAGT
TGGCAAATCGTTATATGTCCAAGTCAGGGACCAATAAGCTGTATTTGAAGCAAAAGTTCTATGGGTTGAAGATGCAGGAG
GGGTCGGATCTTGTGGAGCATGTGAATGCCTTTAATCAATTGGTCACGGATCTAGCGCGTCTGGATGTGAAGATTGAGGA
TGAGGATAAGGCACTACTTCTTCTTGTTTCGTTGCCACTGTCCTATGATCATTTGGTCATTACATTGACACATGGAAAGA
CAACCATCAATAATGAGGAAGTCACTGCTGCGTTACTTGGACATGAGTTGATGAAGCAAAAGAATGCTGC----AAAAAG
GGAGAGTA-CTCAAGGTTTGGGGTTGGCAGTTAAAGGTTATCAGCTCAGGAAGGGACAAGAGGCGGAGAAGAAAAAGAAG
AAAAAGGTGCAGTGCTACAGGTGTAAAGACTGGGGACATATAAAGAGGGAATGCCCAGAACTG-----------------
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>chr6D_644
TA------------------------------------------------------------------------------
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-----TGGAACTCTTTT--TCCGTCTGAGAAAAGGAAAAGACAGGGCCACGTGATCCAATGGTAATAAAAGGCTAGGGTC
GACGAGGCTAGCAGGCA--TGACAGAAATTGTGTGCGAGTTCAGGGAAAAGGTGGAGCGGATGAGTTGCTCTGGGCGG-A
ATTAATCTGCGCGTTGCGGCAAGAGGCTTCAGG-TGATTTTCGGAAGGGCGGACAGGGAGGTTGTGCGGGTCAGT--TTT
CTTGG-TAGATCGTGGACTGCGTTGTGGCTTCAGACGAGGAATTTGGGATCGGTGATCTTTTTCGTGAGGAAGTCGCACA
GGAA---AACAAAGGTGGTAAGACAGGCAGCAACTGGTCGGTTAGATCGCGGCTCGGCATGGTGCCGGGATTCACCAAGT
TTGATGTGGAGAAATTTGATGGCACGGATAACTTCTGTCTATGGCAGACAAGAGTCAAGGATATTCTCGCGCAGCAGGGA
ATCTTGAAGGGTTTGTAGGAGACGAAGCCGACCAAGGTTGACAATGATGCATGGGAGGATATGCAAGTGCAAGCGGCCGC
TACCATATGGCTTTGTCTTGCGGATCAGGTCATGTATCATGTCATGGACGAAGATTCTCCTAACGGAATTTGGGACGAGT
TGGAAAATTGTTATATGTCCAAGTCAGCGACCAATAAGATGTATTTGAAGCAGAATTTCTATGG------GATGCAGGAG
GGGTCGGATCTTGTGGAGCATGTTAATGACTTTAACCAGTTGGTCACGAATCTAGCGCGTCTGGATGTGAAGATTGAGGA
TGAGGATAAGGCACTACTTCTTCTCGTTTCGTTGCCATCGTCCTATGCGCATTTGGTCATTACATTGACACATGGAAAGA
CAACCGTCAATAATGAGGAAGTCAACGCAGCGTTGCTTGGACATGAGTTGAGGAAGCAAAAGAATGCTAC----AGA---
GGAGAGTA-CACAAGGTTTGGGGTTGGCAGTTAAATGTTATCAGCTCAGGAAGGGACAAGAAGCGGAGAAGAAAAAGAAG
AAAAAGGTGCAGTGCTACAGGTGCAAGGATTGGGGACATATAAAGAGGGAATGCCCATAACTG-----------------
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>chr1A_648
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---G-----ACACGATT--TCCATATTAGGCAAGGAAAAGTAGCGCCCG--TGGTCCAGCGGAAATAAAAAACTAGCGAC
G--GAGGCTAGTAGACA--CAACATAAATTGTTTGCGAGTTCAGGGAAAAGGTGGAGCGGATGAGTTGCTGTGGGCGG-A
ATTAATCCATGCGTTGCGGTAAGAGGCTTCAAG-TGATTTTCTAAAGGGCAGACACGAAGGTTGTGCGGGTCATA--TTT
CTTGG-TAGATCGTGGGCTGCAGCGTGGCTTCAGATGAGGAATACGGGATTGATGATCTTTTTCGTGAGGAAGCCACAAA
GGAA---AACAAGGGCGGTTAGACCGGCGGCAACATGTCGGTTAGATCGCGGCTCGGCATGGTGCCGGGGTTCACCAAAT
TTGATGTGGAGAAATTCGATGGCACGGGTAACTTCGGTCTATGGCAGACAAGATTCAAGGATATTCTGGCGCAGCAGGGA
ATCTTGAAGGGTTTGCAGGAGACGAAGCCGACCAAGGTTGACAATGATGCATGGGAGGATATGCAAGTGCAGGCGGCCGC
TACCATACGGCTTTGTCTTGCGGATCAGGTCATGTATCATGTCATGGATGAAGATACTCCTAAGGGAATTTGGGACAAGT
TGGCAAATCGTTATATGTCCAAGTCAGCGACCAATAAGCTGTATTTGAAGCAAAAGTTCTATGGGCTGAAGATGCAGGAG
GGGTCGGATCTTGTGGAGCATGTGAATGCCTTTAATCAGTTGGTCACGGATCTAGCGCGTCTGGATGTGAAGATTGAGGA
CGAGGATAAGTCACTACTTCTTCTTGTTTCGTTGCCACCATTCTATGAGCATTTGGTCATTACATTTACACATGGAAAGA
CAACTGTCAATAATGAGGAAGTCACTGCAGCGTTGCTTGGACATGAGTTGAGGAAGCAAAAGAATGCTAC----AAA---
GGAGAGTA-CTCAAGGTTTGGGGTTGGCAGTTAAAGGTTATCAGCTCAGGAAGGTACAAGAGGCGGAGAAGAAAAAGAAG
AAAAAGGTGCAGTGCTACAGGTGTAAGGACTGGGGACATATAAAGAGGGAATGCCCAGAACTG-----------------
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>chr4D_648
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---G-----AATCGGTT--TCCGTGTGGAGAAAGGAAAATAAGGGCTGGG--TATCCAGCAGTAATAGAAGGCTGGGGCG
A-CGAGGCAGCGGACGCACAG---AAAACAGTCTGCAGTTTC-GGGAATAGGTGGAGCAGTTGGTTTCGGCGGAGAGCAA
GTTCATCTGAGCATTGGCA----AGGCTTCACGCTGATTTTCTGAAGGGCGGACAGGA-CGTTGCGTTGGTCATA--TTT
CTTGG-TAGATCACGGACCGCGGCGTGGCTTCAGACGAGGAATACGGGATCAGTGATCTTTTTCGTGAGGAAGTCGCAGA
GGAA---AA---GGGCGGTAAGACCGGCGGCAACAGGTCGGTTAGATCGCGGCTCGGCATGGCGCCGGGGGTCACCACGT
TTGATGTGGAGAAATTCGATGGCACGGGTAACTTCGGTCTATGGCAGACAAGAGT-AAGGATATTCTGGCGCAGCAGGGA
ATCTTGAAGGGTTTGCAGGAGACGAAGCCGGCCAAGGTTGACAACGATGCGTGGTAGGATATGCAAGTGCAGGCGGCCGC
TACCATACGGCTTTATCTTGCGGATCAGGTCATCTATCATGTCATGGACGAAGATACTCCGAAGGGAATTTGGGATAAGT
TGGCAAATCGTTATATGTCCAAGTCAGCGACCAATAAGCTGTATTTGAAGCAAAATTTTTATGGGCTGAAGATGCAGGAG
GGGTCGGATCTTGTGGAGCATGTGAATGCCTTTAATCAATTGGTCACGGATCTAGCGCGTCTGGATGTGAAGATTGAGGA
CGAGGATAAGGCACTACTTCTTCTTGTTTCGTTGCCACCGTCCTATGAGCATTTGGTCATTACATTGACACATGGAAAGA
CAACCATCAATAATGAGGAAGTCACTGCAGCGTTGCTTGGACATGAGTTGAGGAAGCAAAAGAATGCTAC----AGA---
GGAGAGTA-CTCAAGGTTTGGGGTTGGCAGTTAAAGGTTATCAGCTCAGGAAGGGACAAGAGGCGGAGAAGAAAAAGAAG
AAAAAGGTGCAGTGCTACAGGTGCAAGGATTGGGGACATGTAAAGAGGGAATGCCCAGAACTG-----------------
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>chr2D_649
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---------ACTCGTTT--TCCGTGTCAGA-GAGGAAAAGAAGGGCCAGCTATATCCAGCGGAAATAAAGGGCCGGGGCG
A-CGAGGCTAGCAGGGC----ACACAATCAATCTGCAGGTTCAGGAAAAAGGTGGAGTAGCCAGTTTGGGTGGAGAGCAA
CTAA---TCTGCGTTACGGCGACGGGTTCCACA-GGAATTTCTGAAGGGCAGACAGGAAGGTTGTGTGGGTCAGA--TTT
CTTGG-TAGATCGCGGACTGCGGCGTGGCTTCAGACAAGGAATACGGGATCAGCGATCTTTTT-GTGAGGAAGTCACG--
GGAA---AA---GGGCGGTAAGACCGGCGGCAACGGGTCGATTAGATCACGGCTCGGCATGGCGCC-GGGTTCACCAAAT
TTGATGTGGAGAAATTCGATGGCACGGGTAACTTCAGTCTACGACAGACAAGAGTAAAGAATATTCGGGCGCAGCAGGGA
ATCTTGAAGGGTTTGCAGGAGACGAAGCCGGCCAAGGTTGACAATGATGCGTGGGAGGATATGCAAGTGCAGGCGGCCGC
TACCATACGGCTTTGTCTTGCGGATCAGGTCATGTATCATGTCATGGACGAAGATACTCCTAAGGGAATTTGGGACAAGT
TGGCAAATCGTTATATGTCCAAGTCAGCGACCAATAAGCTGTATTTGAAGCAAAAGTTCTATGGGCTGAAGATGCAGGAG
GGGTCGGATCTTGTGGAGCATGTGAATGCATTTAATCAATTGGTCACGGATCTAGCGCGTCTGAATGTGAAGATTGAGGA
CGAGGATAAGGCACTA------CTTGTTTCGTTGCCACCGTCCTATGAGCATTTGGTCATTTCATTGACACATGAAAAGA
CAACCGTCAATAATGAGGAAGTCACTGCAGCGTTGCTTGAACATGAGTTGAGGAAGCAAAAGAATGCTAC----AGA---
GGAGAGTA-CTCAAGGTTTGGGGTTGGCAGTTAAAGGTTATCAGCTCAGGAAGGGACAAGAGGCGGAGAAGAAAAAGAAG
AAAAAGGTG-AGTGCTACAAGTGCAAGGATTGGGGACATATAAAGAGGGAATGCCCAGAACTG-----------------
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--------------------------------------------------------------------
>chr7A_701
--------------------------------------------------------------------------------
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---------------------------------------------------------------AATAAGAGGCTGGGGCG
A-CGAGGCGCAAAGGCA--CAAAAAAAATAGTCTGCGAATTCAGGGAAAAGGTGGAGCGGACGAGTTGGTGTGGGTGG-A
ATTAATCTGTGCATTGCGGCAAGAGGCTTCATG-TTATTTTCTGAAGGGCAGACAGGGACGTTGTGATGGTCATA--TTT
CTTGGTTAGATCGCCGACTACGGTGTGGCTTCAGACGAGGAATACGGGATCAGTGATCTTTTTCGTGAGGAAGTCATAGA
AGAAAACAA---GGGCGGTAAGACCGGTGGCAACAGGTCAGTTAGATCGCAGCTCGGCATGGCGCCGGGGTTCACCAAGT
TTGATTTGGAGAAATTCGATGGCACGGGTAACTTTGGTCTATGGCAGACAAGAGTCAAGGATATTCTGGCACAACAAGGA
ATCTTGAAGGGTTTGCAGGAGACGAAGCCGGCCAAGGTTGAAAATGATGTGTCGGAGGATATGCAAGTGCAGGCGGCCGC
TACCATACGGCTTTGTCTTGCGGATCAGGTCATGTATCATGTCATGGACGAAGATTCTCCTGAGGGAATTTGGGACAAGT
TGGCAAATCGTTATATTTCCAGGTCAGCGACCAATAAGCTGTATTTGAAGCAAAAGTTCTATGGGCTGAAGATGTAGGAG
GGGTCGGATCTTGTGGAGCATGTGAATGCCTTTAATCAGTTGGTCACGGATCTAGCGTGTCTGGATGTGAAGATTGATGA
TGAGGATAAGGCACTACTTCTTCTTGTTTCGTTGCCACTGTTCTATGAGCATTTGGTCATTACATTGACACATGGAAAGA
CAACCGTCAATAATGAGGAAGTCACTGCAACGTTGCTTGGACATGAGTTGAGGAAGCAAAAGAATGCTAT----AGA---
GGAGATTA-CTCAAGGTTGGGGGTTGGCAGTTAAAGGTTATCAACTCAGGAAGGGACAAGAGGCGGAGAAGAAAAAGAAG
AAAAAGGTGCAGTGCTACGGGTGCAAGGACTGGGGACATGTAAAGAGGGAATGCCTAGAACTG-----------------
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--------------------------------------------------------------------
>chr5A_1718
--------------------------------------------------------------------------------
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--------------------------------------------------------------GTGTTGGGGAACATAGCA
ATAATTCAAA-AAAATT-CTACGTGTCACCAAGATCAATCTAGGAGATACTAGCAACAAGAGAGAGGGAGTGCATCTTCA
TACCCTTGAAGATCGCTAAGCGGAAGCGTTACAAGAACGCGGTTGGTGGAGTCGTACACGCAGCGATTCAGATTGTGGTC
GATTCCGATCTAAGCG-TCGAACAACGGCGCCTCCGCGTTCAACACACGTACAGCCCGGGGACGTCTCCTCCTTCTTGAT
CCAGCAAGGGGAGATGAGAAGTT-AGGGAGAACTCCGATAGCACGACGGCGTGGTGGTGATGGAGCTCGTGGTTCTCCAG
CACGGCTTCGCCAAGCGCTACAGAGGAGGAGGAGGTGTAGGAGAGGGGAAGGGGTTGCGCCAGGGGAAGGGTGCGGCTGC
CCTCCCACCCCCACCCCCACTATATATAGGGGCAAGGGAGA--GGGGG-CCGGCCCCC-TCAGATCCCATCTAGGGGAGG
GGCGGCGGCCAGGGAGGGGAAACTTGCCCCCCAAGCCAAGGGGGTCGCCCCC-TTTAGGGTTTCCCCTCAACCCTAGGCG
CATGGGCCC--GGGGGGA--TGGTGCCCAGCCCACTTAGGGGCTGGTTCCCCTCCACATACAACCCAT
>chr5A_1718
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--------------------------------------------------------------GTGTTGGGAAACGTAGCA
ATAATTCAAA-AAAATTCCTACGTGTCACCAAGATCAATCTAGGAGATACTAGAAAAGAGAGAGAGGGAGTGCATCTTCA
TACCCTTGAAGATCGCTAAGCGGAAGCGTTACAAGAACGCGGTTGGTGGAGTCGTACACGCAGCGATTCAGATCACGATC
AATTCCGATCTAAGCG-CCAAACAATGGCGCCTCCGCGTTCAACAGACATACAGCCTGGGAACGTCTCCTCCTTCTAGAT
CTAGCAAGGGGAGAGGAGAAGTTGAGGGAGAACTCCGACAACACGATGGCATGGTGGTGATGGAGCTCGTGGTTCTCCGA
CAGGGCTTCGCCAAGCACTACAGAGGAGGAGGAGGTGTAGGAGAGGGGGAGGGGCTATGCCAGGGGAAGGGTGCGGCTGA
CCTCTCTCT----CCCTCACTATATATAGGGGCAAGGGAGA-GGGGGG-CCGGCCCCC-TCAGATCCCATCTAGGGGAGG
GGCGGCGGCCAGGGAGGGGAAACTTGCCCCC-AAGCCAA-GGGGACGCCCCC-TTGAGGGTTTCCCCTCAACCCTAGGCG
CATGGGCCCTAGGGGGG---TGGCGCCCAGCCCACTTAGAGGCTGGTTCCCCTCCACATACAGTCCAT
>chr7A_1718
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--------------------------------------------------------------GTGTTGGGGAACGTAGCA
ATAATTCAAA-AAATTTCCTACGTGTCACCAAGATCAATCTAGGAGATACTAGCAACAAGAGAGAGGGAGTGCATCTTCA
TACCCTTGAAGATCGCTAAGCGGAAGCGTTACAAGAACGTGGTTGGTGGAGTCGTACATGCAGCGATTCAGATCGCGGTC
GATTCCGATCTAAGCG-CCGAACAATGGCGCCTCCGCGTTCAACACACGTATAGCCCGGGAA-GTATCCACCTTCTTGAT
CCAGCAAGCGTAGAGGAGAAGTTGAGGGAGAACTCCGACAGCACGACGGTGTGGTGGTGATGGAGCTCGTGGTTGTCCGG
CAGGGCTTCGCCAAGCGCTACGGAGGAGGAGGAGGTGTAAGAGAGGGGGAGGGGCTGCGCCAGGGGAAGGGTGCGGCTGC
CCTCTCTCT----CCCTCACTATATATAGGGGCAAGGGAGA-GGG-GG-GCGGGCCCC-TCAGATCCCATCTAGGGGAGG
AGCGGCGGCCAGGGAGGGGAAACTTGCCCCCCAAGCCAAGGGGGGCGCCCCCTTTTAGGGTTTCCCCTCAACCCTAGGCG
CATGGGCCCTAAGGGGA---TGGCGCCCAGCCCACTTAGGGGCTGGTTCCCCTCCACATACAGCCCAT
>chr2A_1719
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---------------------------------------------------------------TGTTGGGGAAAGTAGCA
ATAATTCAAA-AAATTTCCTATGTGTCACCAAGATCAATCTAGGAGATACTAGCAACGAGAGAGAGGTAGTGCATCTTCA
TACCCTGGAAGATCGCTAAACGGAAGCGTTACAAGAACGCGGTTGGTCGAGTCGTACACGCAGCGATTCAGATCGCGGTC
GATTCCGATCTAAGCGTC-AAACAACGGTGCCTCTGCGTTCAACACACGTACAGCCAGGGGACGTCTCCTCCTTCTTGAT
CTAGCAAGGGGAGAGGAGAAGTTGAGGGAGAACTCCGACAGAACGATAGCGTGGTGGTGATGGAGCACATGGTTCTCCGG
CAGG-CTTCGCCAAGCGCTACAAAGGAGGAGGAGGTGCAGGAGAGGGGGAGGGGTTGCGCCAGGGGAAGGGTGCTGCTGC
CCTCCCACA----CCCCCACTGTATATAGGGGCAAGGGAGA-GGG-GG-GCCGGCCCTCCCAGATCCCATCTAGGGGAGG
A-CAGCGGCCAGGGAGGGGAAACTTGCCCCCCAAGCCAAGGGGGGCGCCCCC-TTTAGGGTTTCCCCTTAACCCTAGGCG
CATGGGCCCTAGGGGGAA--TGGCGCCCAACCCACTTAGCGGCTGGTTCCCCTCCACATACAGCCCAT
>chr5D_1719
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---------------------------------------------------------------TGTTGGGGAACGTAGCA
ATAATTCAAA-AT-TTTCCTACGTGTCACCAAGATCAATCTAGGAGATACTAGCAACGAGAGAGAGGGAGTGCATCTTCA
TACCCTTGAAGATCGCTTAGCGGAAGCGTTGCAAGAACGCGGTTGGTGGAGTCGTACACGCAGCGATTCAGATCACGGTC
GATTCCGATCTAAGTG-CCGAACAACGGCGCCTCCGTGTTCAACACACGTACAGCCCGGGGACATCTCCTCCTTCTTGAT
CCAGCAAGGGAAGAGGAGAAGTTGAGGGAGAACTCCGACAACACGACGGCGTGGTGGTGACGGAGCTCGTGGTTCTCCGG
CAGGGCTTCGCCAAGCGCTAC---GGAGGAGGAGGTGTTGGAGAGGGGGGAGGACTGCGCCAGGGGAAGGGGTCGGCTGC
CCTCCCACC----CCCCCACTATATATAGGGGCAAGGGAGA-GGG-G--CCGTCCCCC-TTAGATGCATCTA--GAGGGG
GGCGGCAGCCAAGGGGGGAAGACTTGCCCCCCAAGCTAGGTGGGGCGCCCCC-TCTAGGGTTTCCCC-CATCCCTAGGCG
CATGGGCCCTAGGGGGGAGTTGGCGCCCAGCCCACCTAGGGGCTGGTTCCGCTCCATATTCAGCCCAT
>chr5A_1719
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---------------------------------------------------------------TGTTGGGGAACGTAGCA
ATAATTCAAA-AAAATTCCTACATGTCACCAAGATCAATCTAGGAGATACTAACAATGAGAGAGAGGGAGTGCATCTTCA
TACCCTCGAAGATCGCTAAGTGGAAGTGTTACAAGAATGTGGTTGGTGGAGTCGTACACGCAGCGATTTAGATCGCGGTC
GATTCCGATCTAAGCG-CCGAACAACGACGCCTCCGCATTCAACACACGTACAGCCCGGGAACATCTCCTCCTTCTTGAT
CCAACAAGGGGAGAGGAGAAGTTGAGGGAGAACTCTGACAGCACGACGGCGTGGTGGTGATGGAGCTCGTGGTTCTCCGG
TAGGGCTTT-CCAAGCGCTACGGAGGGGGAGGAGGTGTAGGAGAGGGGGAGGGGCTGTGCCAGGGGAAGGTTGCGGCTTC
CCTCTCTCT----CCCTCACTATATATAGGGGCAAGGGAGA-GGG-GGCCCGGCCCCC-TCAGATCCCATCTAGAGGAGG
GGCGGCGGCCAGGGAGGGGAAACTTGCCCCCCAAGCCAAGGGGGTG--CCCC-TTTAGGGTTTCCCCTCAACCCTAGGCG
CATGGGCCCTAGGGGG----TGGCGCCCAGCCCACTTAGGGGCTGGTTCCCCTCCACATACAGCCCAT
>chr1A_1719
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---------------------------------------------------------------TGTTGGGTAACATAGCA
ATAATTCAAA-AAAATTCCTACGTGTCACCAAGATCAATCTAGGAGATACTAGCAACGAGACAGAGGGAGTGCATCTTCA
TACCCTTGAAGATCGCTAAGCGGAAGCGTTACAAGAATGCGGTTGGTGGAGTCGTACACGCAGCGATTCAGATCGCGGTC
GATTCTGATCTAAGTG-C-GAACAACGGCGCCTCCGCGTTCAACACATGTACATCCCAGGTATGTCTCCTCCTTCTTGAT
CCAGCAAGGGGAGAGGAGAAGTTGAGGGAGAACTCCGATAGCATGACGGTGTGGTGGTGATGGAGCTTGTGGTTCTTCGG
CAGGGCTTCGCTAAGCACTACGGAGGAGGAGGAGGTGTAGGAGAGGGGGAGGGGTTGCGCTAGGGGAAGGGTGCTGCTAC
CCTCTCTCT----CCGTCACTATATATAGGGGCAAGGGAGA-GGG-GG-GCCACCCCT-CCAGATCCCATCTAGGGGAGG
AGCGGCGGCCAGGGAGGGGAAACTTGCCCCCCAAGCCAAGGGGGCG--CCCCCTCTAGGGTTTCCCCTCAACCCTAGGCG
CATGGGCCCTAGGGGGGA--TGGCGCCCAGCCCACTTAGGGGCTGGTTCCCCTCCACATACAGCCCAT
>chr6A_1719
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---------------------------------------------------------------TGTTGGGTAACGTAGCA
ATAATTCAAAGAAAATTCCTACGTGTCACCAAGATCAATCTAGGAGATACTAGCAACGAGACAGAGGGAGTGCATCTGCA
TACCCTTGAAGATCGCTAAGCGGAAGCGTTACAAGAACGCGGTTGGTGGAGTCGTACACGTAGCGATTCAGATCGAGGTC
GATTCTGATCTAAGCGCC-GAACAACGGCGCCTCCGCGTTCAACACACATACAGCCCGAGAACGTCTCCTCCTTCTTGAT
CCAGCAAGGGGATAGGAGAATTTGAGGGAGAACTCCGACAGCACGACGGCGTGGTGGTGATGGAGCTCGTGGTTCTCCAG
CAGGGCTTCACCAAGCGCTACGGAGGAGGAGGAGGTGTAGGAGAGGGGGAGGGGCTGTGCTAGGGGAAGGGTGCAGCTGC
CCTCTCTCT----CCCTCACTATATATAGGGGCAAGGGAGT-GGG-GGC-CGGCCCCC-TCAGATCCCATCTAGGGGAGG
GGTGGCGGCCACGGAGGGGAAACTTGCCCCCCAAGCCAAGGGGGGCGCTCCC-TTTAGGGTTTCCTCTCAACCCTAGGCG
CATGGGCCCTGGGGGGG---TGGCACCCAGCCCACTTAGGGGCTGGTTCCCCTCCACATACAGCCCAT
>chr6A_1719
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---------------------------------------------------------------TGTTGGGGAACG-AGCA
ATAATTCAAA-AAAAATCCTACGTGTCATCAAGATCAATCTAGGAGATGCTAGCAACGAGAGAGAGGGAGTGCATCTTCA
TACCATTGAAGATCGCTAAGCGGAAGCGTTACAAGAACGCGGTTGGTGGAGTCGTACACGCAGCGATTCAGATCGCGGTC
GATTCCGATCTAAGCGCC-AAACAACGGCGCCTCCGCGTTCAACACACGTACAACCCGGGAACGTCTCCTCCTTCTTGAT
CCAGCAAGGGGAGATGAGAAGTTG-GGGAGAACACCGACAGCACGACGGCGTGGTGGTGATGGAGCTCGTGGTTCTCCGG
CAGGGCTTCGCCAAGCGCTACGGAGGAGGAGGAGGTGTAGGAGAGGGGGAGGGGCTGCGCCAGGGGAAGGGTGTGGCATC
CCTCCCA------CCCCCACTATATATAGGGGCAAGGAAGAGGGG-GGC-CGCCCCCC-TCAGATCCCATCTAGGGGAGG
GGCGGCGGCCAGGGAGGGGAAACTTGCCCCC-AAGCCAA-GGGGGCGCCCCC-TTTAGGGTTTCC-CTCAACCCTAGACG
CATGAGCCCTAGGGGGAA--TAGCGCCCAGCCCACTTAGGGGCTGGTTTCCCTCCAAATACTGCCCAT
>SNPs
---------------S--------------S------------S---S-----------------S-SSS----------
--------------------------------------------------------------------------------
-------------S------------------------S-----------------------------------------
-----------------------------------------------S--------S-S---------------------
-S--------SS-S-----S--S-S-SS----------S-------------------------S---------------
-----------S--------------------------------------------------------------------
------S------S---------S-------S--S--S--SSSSS----S----------SSSSSSSSS-SSSSSS----
---S-----------------SS-S----------------SS-S--S----------------S----S-------S--
--------------S-------SSSSSSS-----SSSSSS------------S---S-----------------S-SSSS
SSSSSS-SSS--S---S-S-SS-SSSSSS----------------------------------SS-----S------S--
-S-----------------------S-------------------------S-SS-S-SS--------------------
-----------------------------------------S-------S------------------S-----------
-S--------S-------------------------------S------------------------------SS--S--
-------S------------------------------------------------------------------------
--------------------------------------S----------------------------S------------
----------S--------------------------------------------S------------------------
-------------------------------------------S-------------S--------------S-------
----------------------------S---------------------------------------------------
---------S-------------S---S-------------------------------------S--------------
--------------------------------S-------------S-----------S---------------------
------------SS-----S-----------------------------S------------------------------
--------------------S--------------------------------------------------S--------
------------------------------------S-------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------S-S---------------------------------------
-----------------------------------------------S--------------------------------
---S----------------------------------------------------------------------------
-----------------------S------------------S-------------------------------------
-----------------------------S---------S----------------------------------------
-----S-----------------------------------------------------S--------------------
--------------------------------------------------------------------
>forward_852
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--------------------------------AGGAAAATACAGGGCCAGGC----------------------------
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>reverse_2041
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----------------------------------------AGTTGGTGGAGTCGTACACG--------------------
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--------------------------------------------------------------------
