>input_sequence_83279
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------ATGGCTCCTACCAGTAGCAACGCTCGGGTCTTGTGTCTGGTGGCTCTCC
TGGTCATGTCTACCACCTTCTTGTCCTGTGATGCAGCAGGTATATATCCCTCCTATTAGTTTCTCTCGAGCGTATCCTTT
ATCCCTTAAATTACCCTGCTGGTCGACAGTTGTGTGCTAACCTGCTTAATTGCTCTATAGGTGGGTGGACGAAGTTTTGC
GTACCCGAGAAAGCCTGCGAGACCCCAGCAGGACTTCACGGTGACTATGTGTGCAAGGTTGACTGCGGACGCCAAGGTTA
TGATGAGGATAAAAGCCACTGCACGAGTGGCATTTGCTGCTGTGAAAAGTAA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr6D_1_TraesCS6D01G098100
CACTAGCTTCATTTTGCCATTTCACATGACTTTCTTGTTGTACAATTTTTCGTTTCA-ACTATCGGAGACGGGTAGATCT
ACGTCTCCCTACTGAATGTACAAACGTGTCACACATGGCCATTAGTCAACTGAAAAACGATTCATGCACAGTCGGTCTCG
TGACCGTTGGATGAGGATTCGAGGGCTACCACACCTTTTTCTACCTTCATTCAACCCTTCTCTTCTTCCTTCAGCACCCC
GTTTCCGCGTGAGGTAACTTCCTCGCGTGGATAAAGGTGAGATTAATGATCTGAGCGTACGGAAGCAAAAGAGCAACATG
TTGTATTTGAGAAGAAAATGCTCATAGAGAAATAATCGTGTGTGTTTCTTCTCAGCCCGGTAGAGGAGGATGCATGCTAC
CAAACTACTTGCACAGCGTAGTTTCTCTTTTTAGGCTACTTGCTCAATATAGTTTTTACCTTGTTTTTTCAGAACCAGGC
CCAACTCAGCCAAGCTCGCCACAAACTTGAAAATGTTGCAGGCTATCAAACGCATCCTATATAAATTTAAGAGATGTTTT
TGTCTTCAAGCATCAACTATCACTCACGCTGGGGTGG-------------------------------------------
--------------------------------------------------------------------------------
--GGTGTGTGAATTGCAGCTGGTCCAAACATCAATACAGGATC---------------------TACGAAAATCAATACA
GGATCTACGAAAATCAACTACTCCCTCCGTTTCTAAATATTTGTTTGTCTAGACATTTCAACAAATGACTACATACGAAG
CAAAATGAGTGAATCTACACTCTAAAATATGTCTATATACAAATATTTAGGAACATTGGGAGTATCACTCAGGCTGTGGG
CGATTGTCTCATGCCCGTATCTTCGAAAATCAATACAGGATC-TTATAATTCTCTCCAAAATTTTCTCATTAATATAGGA
ATAATTCTGCGATTTTGCTTTCCCTCTATATAAACAACAGCACATCCATGGAACATCTACCAAC---TACCATCGACACA
GGAAGGAAAGGAATATAGCTAACTGTTTCTCATGGCTCCTACCAGTAGCAACGCTCGGGTCTTGTGTCTGGTGGCTCTCC
TGGTCATGTCTACCACCTTCTTGTCCTGTGATGCAGCAGGTATATATCCCTCCTATTAGTTTCTCTCGAGCGTATCCTTT
ATCCCTTAAATTACCCTGCTGGTCGACAGTTGTGTGCTAACCTGCTTAATTGCTCTATAGGTGGGTGGACGAAGTTTTGC
GTACCCGAGAAAGCCTGCGAGACCCCAGCAGGACTTCACGGTGACTATGTGTGCAAGGTTGACTGCGGACGCCAAGGTTA
TGATGAGGATAAAAGCCACTGCACGAGTGGCATTTGCTGCTGTGAAAAGTAATATAAGCCGTCGATA-GTTTTGTTATGT
GCTGGAACGATTTTGCGTAGTGAGGGAGACTTATTTTCTATGCACACCTAGGTTTAGTTCATACAGAAACAATCAGTAAA
CTGTAATGGTTGTATTCTTGAGACAAATTCTGCAATGGTTGATCTATATGTCTTCCTTCTTTTGCGAACGATTTATTTGT
TTTCCCTAGCCCTCCAATCAAAAGAAAAATTGAACAAACCTTTGATGACTATGAAGCACCGAAATCTCTACTCCTAATGG
AGCAGTTGGTAGTCTCGCTTCCAGGTTTTTTTTTCGTCCCACCTCCCATGGG-TTTTTTTGGTACCTCCTCCCACG-TTC
GCTGGTTTTTTTTCGTAGA---TTTTTT--CGACCCCTCCCCCCACTTCATCGGTTTATTTTCGCATCACCCTCTCACAT
AATGAAAGAAATCTGAACAAATCAGAACTTTTCATACTGGCGCAAGTTATTTAGTAATGTAGAATCAATCACGAACAATC
TCTAAAGATCAAATCTAAATTAAATAACCTTACCTTAAATCACTCAATCACATTAATTAGAAAACAAATAATTGATTTTC
AG-AAAAATCGCTCAATCACATTAACCTTACCTTAACTCACGGATGGTAATCAATCTCCAAACAAAGGAAACAATGCATC
GAGGGAGGAGTAAATAAACTCCCTTTCTTATGACATGTATATGATCTTCCCTTCCCTCTC-GTTGTCGAGCATTCTTGAT
TCTCGAGGCCGATGCTTGGGCTGCTTCACTGGGTCGCGACGGTGCCGGAGGACGAGGACGGCGAGGCCGGGTGCCGCGGC
ACCGCGTTGGCCGCGGCCGGTAAAGGGGGCGAAGAAGGGCGGCTTCCCTGGCCCTGGCCGTGGCCGTGGCCCTGGGAGTT
GGTGCGGTGGAAGCGGCACTTGAAGGACCCGGCGTGGGTGGCCGGTGCGCAAACGCACTTGGAAGCGGGCCCGTGGCCCG
TGCCGGACGGCGCCGACGCCGA
>chr6B_1
CACTAGCTTCATTTTGCCATTTCACACGACTTTCTTGTTGTACAATTTTTTCCTTTCGACTATCGGAGACGGGTAGATCT
ACGTCTCCCTACTGAGTGTACAAACGTGTCACACATGGGCATTAGTCAACTGAAAAACTATTCATACCCAGTCAGTCTCG
TGACCGTTGGATGAGGATTCGAGGGCTACCATACCTTTTTCTACCTTCATCCGGCCCTTCTCTTCTTCCTTCAGCACCCC
GTTTCCGCGTGAGGTAAGTTCCTTACGTGGATAAACGTGAGATTAATGATTTGAGCGTACGGAAGCAAAAGAGCAACATG
TTGTATTTGAGAAGAAAATGCTCGTAGAGAAATATTCGTGTGTGTTTCTTCTCAGCCCGGTAGAGGAGGATGCATGCTAC
CAAACTACTTGCACAGCGTGGTTTGTCTTTTCAGGCTACTTGCACAATATAGTTTTTACCTTGTTTTTTCAGAACCAGGC
CCAACTCAGCCAAGCTCACCACAAACATGAAAATGTTGCAGGCTATCAAACGCATCCTATAAAT-TTTAAGAGATGTTTT
TGTCTTCAAGCATCGACTATCACTCACGCTGGGGTGG-------------------------------------------
--------------------------------------------------------------------------------
--GGTGTGTGAATTGCAGCTGGTCCAAACATCAATACAGGTTC---------------------TACGAAAATCAATACA
GGATCTACGAAAATCAACTC------------------------------------------------------------
----------------------------------------------------------------TCACTCAGGCTGTGGG
CGATCGTGTCATGCCCGTATCTACGAAAATCAATACAGGATC-TTATAATTCTCTCCAAAATTTTCTCATTAATATGGGA
ATAATTCTGTGATTTTGTTTTCCC-CTATATAAACAACAGCACATCCATGGAACATCAACCAAC---TACCATCGACACA
GGAAGGAAAGGAATATAGTTAACTGTTTCTCATGGCTCCTACCAGTAGCAACACTCGGGTCTTGTGTCTGGTGGCTCTCC
TGGTCATGTCTACCACCTTCTTGTCCTGTGATGCAGCAGGTATATATCCCTCCTATTAGTTTCTCTCTAGCGTATCCTTT
ATCCCTTAAATTACCTTGCTGGTCGACGGTTGTGTGCTAATCTGCTTAATTGCCCTATAGGTGGGTGGACGAAGTTTTGC
GTACCCGAGAAAGCCTGCAAGACCCCAGCAGGACTTCACGGCGACTATGTGTGCAAGGTTGACTGCGGACGCCAAGGTTA
TGATGAGGATAAAAGCCACTGCGCGAGTGGCATTTGCTGCTGTGAAAAGTAATATAAGCCGTCGATATGTTTTGTTATGT
ACTGGAACGATTTTGCGTAGGGAGGGAGACTTTTTTTCTATGCACACCTAGGTTCAGTTCATACAGAAACAATCAGTAAA
CTGTAACGGTTGTATTCTTGAGACAAATTCTGCAATGGTTGATCTGTATGTCTTCCTTCTTTTGTGAAAGATTTATTTGT
TTTCCCTAGCCCTCCAATCAAAAGAAAAATCGAACAAACCTTTGATGGCTATGAAGCACCG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr6A_468
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TCAGAACCAAGC
CCAACTCAGCCAAGCTCACCACAAACATGAAAATGTTGCAGGCGATCAAACGAATCCTATAAAT-TTTAAGACATGTTTT
TGTCTTCAAGCATCAACTATCACACTCGCTGGGGTGGGGTCAAACACTCTGGTAATAGCACTGCTAACCTCTGCTCCAGC
ACTGCTAGCCGCACACATCTCGTAAAATAGGAACGGTTGAGATAATGGACACCATGTAGCTCGTCCTACATTGCAACTTT
CCGGTGTGTGAATTGCAGCTGGTCCAAACATCAATACAGGATCTACAATAATCAATATAGGATATACGAAAATCAATACA
GGATCTACGAAAATCAACTA------------------------------------------------------------
----------------------------------------------------------------TCACTCAGGCTGTGGG
TGATTGTGTCATGTTCGTATCTACGAAAATAAATACAGGATCTTTATAATTCTCTCCAAATTTTTCTCATTAATATAAGA
ATAATTCTGTGATTTTGTTTTCCC-CTATATAAACAACAGCACATCCATGGAACATCTACCAACTAGTACCATCGACACA
GGAAGGAAAGGAATATAGCTAACCGCTTCTCATGGCTCCTACCAGTAGCAACGCTCGGGTCTTTTGTCTGGTGGCTCTCC
TGGTCATGTCTACCACCTTCTTGTCCTGTGATGCAGCAGGTATATATTCCTCCTATTAGTTTCTCTCTAGCGTATCCTTT
ATCCCTTAAATTACCTTGCTGGTCGACAGTTGTGTGCTAACCTGCTTAATTGCTCTATAGGTGGGTGGACGAAGTTCTGC
GTACCCGAGAAAGCCTGCCAGACCCCAGCAGGACTTCAGGGCGACTATGTGTGCAAGGTTGACTGCGGACGCCAAGGTTA
TGATGAGGATAAAAGCCACTGCGGGAGTGGCATTTGCTGCTGTGAAAAGTAATATAAGCCGTCAATATGTTTTGTTATGT
GCTGGAACGATTTCGCGTAGTGAGGGAGACTTATTTTCTATGCACACCTAGGTTTAGTTCATACAGAAACAATCAGTAAA
CTGTAATGGTTGTATTCTTGAGACAAATTCTGCAATGGTTGATCTATATGTCTTCCTTCTTTTGTGAAAGATTTATTTAT
TTTCCCTAGCCCTCCAATCAAAAGAAAAA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr1D_1591
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AATCTCTACTCCTAATAG
AGCAGTTGGTAGTCTCGCTTCCAGC-TATTTTTTCGTCCCACCTTCCATGGG-TTTTTTGGGTACCTCCTCCCACC-TTC
GCTGGTTTTTTTG---TAGAT-TTTTTT--CGTCCCCTCCCCCCACTTCATCGGTTTATTTTCGCGTCACCCTCTCACAC
AATGAAAGAAATCTGAACAGATCAGAACTTTCCATACTAGCGCAAGTTATTTAGTAATGTAGAATCAATCACGAACAATC
TCTAAAGATCAAATCTAAATTAATTAACCTTACCTTAAATCACTCAATCACATTAATTAGAAAACAAATAATTGATTTTC
AGAAAAAATCGCTCAATCACATTAACCTTACCTTAACTCACGGATGGTAATCAATCTCCAAACAAAGGAAACAATACATC
AAGGGAGCAGTAAATAAACTCCCTTTCTTATGACATGTATATGATCTTCCCTTCCCTCTCTGTTGTCGAGCGTTCTTGAT
TCTCGAGGCCGATGCTTGGGCTGCGTCACTGGGTCGCGACGGTGTCGGAGGATGAGGACGGCGAGGCCGGGTGCCGCGGC
ACCGCGTTGGCCGCGGCCGGTGAAGGGGGCGAAGAAGGGCGGCTTCCCTGGCCCTGGCCGTGGCCGTGGCCCTGGGAGTT
GGTGTGGTGGAAGCGGCACTTGAAGGACCCGGCATGGGTGGCCGGCACGCAGAAGCACTTGGAAGCGGGCCCGTGGCCCA
CGCCGGACAGCGCCGACGCCGA
>chr7D_1591
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AATCTCTTCTCCTAATGG
AGCAGTTGGTAGTCTCGCTTCCAGGGTTTTTTTCCGTCCCACCTCCCATGGT-TTTTTTT-GTACCTCCTCCCACC-TTC
GCTGGGTTTTTTTCATAGA---TTTTTTT--GTCCCCT-CCCCCACTTCATCGGTTTATTTTCGCGTCACCCTCTCACAC
AACGAAAGAAATCTGAACAGATCAGAACTTTCTATACTGGCGCGAGTTATTTAGTAATGTAGAATCAATCACGAACAATC
TCTAAAGATCAAATCTAAATTAATTAACCTTACCTTAAATCACTCAATCACATTAATTAGAAAACAAATAATTGATTTTC
AGAA-AAATCGCTCAATCACATTAACCTTACCTTAACTCACGGATGGTAATCAATCTCCAAACAAAGGAAACAATACATC
GAGGGAGCAGTAAATAAACTCCCTTTCGTATGACATGTATATGATCTTCCCTTCCCTCTCCGTTGTCGAGCGTTCTTGAT
TCTCGAGACCGATGCTTGGGCTGCGTCACTGGGTCGCGACGGTGCCAGAGGACGAGGACGGCGAGGCTGGGTGCTGCGGC
ACCGCGTTGGCCGCGGCCGGTGAAGGGGGCGAAGAAGGGCGGTTCCCCTGGCCCTGGCCGTGGCCGTGGCCCTGGGAGTT
GGTGCGGTGGAAGCGGCACTTGAAGGACCCGGCGTGGGTGGCCGGCGCGCAGACGCACTTGGAAGCA-GCCCGTAGCCAG
CGCCGGACGGCGCCGACGCCGA
>chr5D_1591
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AATCTCTACTCCTAATGA
AGCAGTTGGTAGTCTCGCTTCCA-GGTTTTTTTC-GTCCCACCTCCCATGGTTTTTTTTTGGTACCTCCTCCCATC-TTC
GCTGGGTTTTTTTTCATAGAT-TATTTT--CGTCCCCTCCCACCACTTTATCGGTTTATTTTCGCGTCATCCTCTCACAC
AACGAAAGAAATCTGAACAGATCAGAACTTTCCATACCGGCGCAAGTTATTTAGTAATGTAGAATCAATCACGAACAATC
TCTAAAGATCAAATCTAAATTAATTAACCTTACCTTAAATCACTCAATCACATTAATTAGAAAACAAATATTTGATTTTC
AGAA-AAATCGCTCAATCACATTAACCTTACCTTAACTTACGGATGGTAATCAATCTCCAAACAAAGGAAACAATACATC
GAGGGAGCAGTAAATAAACTCCCTTTCTTATGACATGT-TATGATCTTCCCTTCCCTCTCCATTGTCGAGCGTTCTTGAT
TCTCGAGGCTGATGCTTGGGCTGCGTCACTGGGTCGCGACGGTGCCGGAGGACGAGGACGGCGAGGCCGGGTGCCGCGGC
ACCGCGTTGGCCGCGGCCGGTGAAGGGGGCGAAGAAGGGCGGCTTCCCTAGCCCTGGCCGTGGCCCTGGCCATGGGAGTT
GGTGCGGTGGAAGCGGCACTTGAAGGACCCGGCGTGGGTGGCCGGCGCGCAGACGCACTTAGAAGCGGGCCCATGGCCCG
CGCCGGACGGCGCCGACGCCGA
>chr6D_1592
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------ATCTCTACTTCTAATGG
AGCAGTTGGTAGTCTCGCTTCCAGGGTTTTTTTC-GTCCCACCTCCCATGGTTTTTTTT-GGTACCTCCTCCCTCC-TTT
GCTGGGTTTTTTTTCGTAGATTTTTTTT--CGTCCCCT-CCCCCACTTCATCGGTTTATTTTCGCGTCACCCTCTCACAC
AACGAAAGAAATCTGAACAGATCAGAACTTTCCATACTGGCGCAAGTTATTTAGTAATGTAGAATCAATCACGAGCAATC
TCTAAAGATCAAATCTAAATTAATTAACCTTACCTTAAATCACTCAATCACATTAATTAGAAAACAAATAATTGATTTTC
AGAA-AAATCGCTCAATCACATTAACCTTACCTTAACTCGCGGATGGTAATCAATCTCCAAACAAAGGAAACAATACATC
AAGGGAGCAGTAAATAAACTCCCTTTCTTATGACATGTATATGATCTTCCCTTCCCTCTCTGTTGTCGAGCGTTCTTGAT
TCTCGAGGCCGATGCTTGGGCTGCGTCACTGGGTCGCGACGGTGCCGGAGGACGAGGACGGCGAGGCCGGGTGCCGCGGC
ACCGCGTTGGCCGCGGCCGGTGAAGGGGGCGAAGAAGGGCGGCTTCCCTGGCCCTGACTGTGGACGTGGCCCTGGGAGTT
GGTGCGGTGGAAGCGGCACTTGAAGGACCCGACATGGGTGGCCGGCGCGCAGACGCACTTGGAAGCGGGCCCGTGGCCCG
CGCCGGACGGCGCCGACGCTGA
>chr1D_1592
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------ATCTCTACTCCTAATGG
AGCAGTTGGTAGTCTCGCTTCCAGGTTTTTTTTC-GTCCCACCTCCCATGGTTTTTTT--GGTACCTCCTCCCACC-TTC
GCTGGTTTTTTTTCGTAGA---TTTTTT--CGTCCCCTCCCCCCACTTCATCGGTTTATTTTCGCGTCACCCTCTCACAC
AACGAAAGAAATCTGAACAGATCAGAACTTTCCATACTGGCGCAAGTTATTTAGTAATGTAGAATCAATCACGAACAATC
ACTAAAGATCAAATCTAAATTAATTAACCTTACCTTAAATCACTCAATCACATTAATTAGAAAACAAATATTTAATTTTC
AGAA-AAATCGCTCAATCACATTAACCTTACCTTAACTCACGGATGGTAATCAATCTCCAAACAAAGGAAACAATACATC
GAGGGAGCAGTAAATAAATTCCCTTTCTTATGACATGTATATAATCTTCCCTTCCCTCTCCGTTGTTGAGCGTTTTTGAT
TCTCGAGGCCGATGCTTGGGCTGCGTCACTGGATCGCGACGGTGCCGGAGGACGAGGATGGCGAGGCCGGGTGCCGCGGC
ACCGCGTTGGCCGCGGCCGGTGAAGGGGGCGAAGAAGGGCGGCTTCCCTGGT------CGTGGCCGTGGCCCTGGGAGTT
GGTGCGGTGGAAGCGGCACTTGAAGGACCCGGCGTGGGTGGCCGGCGCGCAGACGCACTTCGAAGCGGGCCCGTGGCCCG
CGCCGGACGGCGCCGACGCCGA
>chr3D_1592
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------ATCTCTACTCCTAATGG
AGCAGTTAGTAGTCTCGCTTTCAGGTTTTTTTTC-GTCCCACCTGCCATGGTTTTTTT--GGTACCTCCTCCCACC-TTC
GCTGGTTTTTTTTCATAGA---TTTTTTTTCGTCCCCTCCCCCCACTTCATCGGTTTATTTTCGCGTCACCCTCACACAC
AATGAAAGAAATCTGAACAGATCAGAACTTTCCATACTGGTGCAAGTTATTTAGTAATGTAGAATCAATCACCAACAATC
TCTAAAGATCAAATCTAAATTAATTAACCTTACCTTAAATCACTCAATCACATTAATTAGAAAACAAATAATTGATTTTC
AGAA-AAATCGCTCAATCACATTAACCTTACCTTAACTCACGGATGGTAATCAATCTCCAAACAAAGGAAACAATACATC
GAGGGAGCAGTAAATAAACACCCTTTCTTATGACATGTATATGATCTTCCCTTCCCTCTCCGTTGTCGAGCGTTCTTGAT
TCTCGAGGGCGAGGCTTGGGCTGCGTCACTGGGTCGCGATGGTGCCGGAGGACGGGGACGGCGAGGCCGGGTGCCGCGGC
ACCGCATTGGCCGCGGCCGGTGAAGGGGGCGAAGAAGGGCAGCTTCCCTGGCCCTGGCCGTGGCCGTGGCCCTGGGAGTT
GGTGCGTTGGAAGTGGCACTTGAAGGACCCGGCGTGGGTGGCCGGCGCGTAGACGCACTTGGAAGCGGGCCCGTAGCCCG
CGCCGGACGGCGCCGACGCCGA
>chr7D_1592
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------ATCTCTACTCTTAATGG
AGCAGTTGGTAGTCTCGCTTCCAGATTTTTTTTT-GTCCCACCTCCCATGGTTTTTTT---GTACCTCCTCCCACCTTTC
GCTGGTTTTTTTTCGTAGA---TTTTTTTTCGTCCCCTCCCCCCACTTCATCGGTTTATTTTTGCGTCACCCTCTCACAC
AACGAAAGAAATCTGAACAGATCAAAATTTTCCATACTGGCGCAAGTTATTTAGTAATGTAGAATCAATCACGAACAATC
TCTAAAGATCAAATCTAAATTAATTAACCTTACCTTAAATCACTCAATCACATTAATTAGAAAACAAATAATTGATTTTC
AGAA-AAATCGCTCAATCACATTAACCTTACCTTAACTCACGGATGGAAATCAATCTCCAAACAAAGGAAACAATACATC
GAGGGAGCAGTAAATAAATTCCCTTTCTTATGACATGTATATGATCTTCCCTTCCCTCTCCGTTGTCGAGTGTTCTTGAT
TCTCGAGGCCGGTGCTTGGGTTGCGTCACTGGGTCGCGACGGTGCCGGAGGACGAGGACGGCGAGGCCGGGTGCCACGGC
ACTGCGTTGGCCGCGACCGGTGAAGGGGGCGAAGAAGGGCGGCTTCCCTGGCCCTGGCCGTGGCCGTGGCCCTGGGAGTT
GGTGCGGTGGAAGCGGCACTTGAAGGACTCGGCGTGGGTGGCCGGCGCGCAGACCCACTTGGAACCGGGCCCCTGGCCCG
CGCCGGACGGCGCCGACGCCGA
>chr2D_1592
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------ATCTCTACTCCCAATGG
AGCAATTGATAGTCTCGCTTTCAGG-GTTTTTTC-GTCCCACCTCTCATGGTTTTTTT--GGTACCTCCTCCCACC-TTC
GCTGGTTTTTTTTCGTAGA---TTTTTTTTCGTCCCCTCCCCCCACTTCATCGATTTATTTTCACGTCACCCTTTCATAC
AACGAAAGAAATCTAAACATATCAGAACTTTCCATACTGACGCAAGTTATTTAGTAATGTAGAATCAATCACGAACAATC
TCTAAAGATCAAATCTAAATTAATTAACCTTACCTTAAATCACTCAATCACATTAATTAGAAAACAAATAATTAATTTTC
AGAA-AAATCGCTCAATCACATTAACCTTACCTTAACTCACGGATGGTAATCAATCTCCAAACAAAGGAAACAATACATC
AAGGGAGCAGTAAATAAACTCCCTTTCTTATGACATGTATATGATCTTCCCTTCCCTCTTCGTTGTCGAGCGTTCTTGAT
TCTCGAGGCCGATGCTTGGGCTGCGTCACTGGGTCGCGACGGTGCCGGAGGACGAGGACGGCGAGGCCGGGTGCCGCGGC
ACCGCGTTGGCCGCGGCCGGTGAAGGGGGCGAAGAAGGGCGACTTCCCTGGCCCTGGCCGTGGCCGTGGCCCTGGGAGTT
GGTGCGGTGGAAGCGGCACTTGAAGGACCCGGCGTGGGTGGCCAGCGCGCAGACGCACTTGGAAGCGGGCCCGTGGCCCG
CGTCGGACGGCGCCGACGCCGA
>chr5B_1593
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TCTCTACT-TTAATGG
AGCAGTTGGTAGTCTCGCTTCCAGG-TTTTTTTT-GTCCCACCTCTTATGGTTTTTTT--GGTACCTCCTCCCACC-TTC
ACTGGTTTTTTTTCGTAGA---TTTTTTTTCGTCCCCTCCCCCCACTTCATCGGTTTATTTTCGCGTCACCCTCTCACAC
AATGAAAGAAATCTGAACAGATCAGAACTTTCCATACTGGTGCAAGTTATTTAGTAACGTAGAATCAATCACGAACAATC
TCTAAAGATCAAATCTAAATTAATTAACCTTACCTTAAATCACTCAATCACATTAATTAGAAAACAAATATTTGATTTTC
AGAA-AAACCGCTCAATCACATTAACCTTACCTTAACTCACGGATGGTAATCAATCTCCAAACAAAGGAAACAATACATC
GAGGGAGCAGTAAATAAACTCCCTTTCTTATGACATGTATATGATCTTGCCTTCCCTCTCCGTTGTCGAGCGTTCTTGAT
TCTCGAGGCCGATGCTTGGGCTGCGTCACTGGGTCGCGACGGTGCCGGAGGACGAGGACGGCGAGGTCGGGTGCCGCGGC
ACCGCGTTGGCCGCGGCCGGTGAAGGGGGCGAAGAAGGGCGGCTTCCCTGGCCCTGGCCGCGGCAGTGGCCTTGGGAGTT
GGTGCGGTGGAAGCGGCACTTGAAGGACCCGGCGTGGGTGGCCAGCGCGCAGACGCACTTGGAAGCGGGCCCGTGGCCCG
CGTCGGACGGCGCCGACGCCGA
>SNPs
--------------------------S-----------------------SSS--SS-----------------------
---------------S----------------------S-------------------S------S-S-----S------
-------------------------------S------------------S-SS--------------------------
-----------------S-----SS----------S--------------S-----------------------------
-----------------------S----------S---------------------------------------------
-------------------S----S------S-----------S------------------------------------
-----------------S--------S----------------------------------S-SS---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
-------S--------------S---------------------------------------------------------
---------S-------S------S-------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
---------------S----------------------------------------------------------------
------------------S----------------------S--------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---S-----------
------------------------------S----------------S-------------S------------------
---------------------------------------------------------------------------S----
--------------------------------S--------------------------------S-------------S
-------------------S-----------S------------------------------------------------
-----------------------S--------------------------------------------------------
---------------------------------------------------------------------------S----
-------S---------------------------------------------------------------S--------
------------------------S-------------------------------------------------------
---------------------S----------------------------------------------------------
---------------------------------------------S-----S----------------------------
S---------------------
>forward_119
--------------------------------------------------------------------------------
-------------------ACAAACGTGTCACACATGGC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_1296
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CTGCTGGTCGACAGTTGTGT---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>forward_192
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------GAGGATTCGAGGGCTACCAC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_1379
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GAGACCCCAGCAGGACTTCA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>forward_258
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CC
GTTTCCGCGTGAGGTAAC--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_2232
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATTCTTGAT
TCTCGAGGCCGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
