>input_sequence_83272
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------------------------------------------------ATGTCGGCGATGACTGCGGCGGTGCCCTTCTG
GCGCGCGGCGGGGATGACCTACATCGGCTACTCCAACGTCTGCGCGGCGTTGGTGCGGAGCTGCCTCAAGGAGCCCTTCA
AGACCGAGGTCTCCTCCCGCGAGAAGGTCCACTTCTCCCTCTCCAAGTGGACCGACGAGAAGCAGCAGAAGCCCAGTAAG
TTCCTCGATTCGATCAAGTCCCTGTCTCGCGTCCTCGATCCGGTTTGATTTGCCTGGTCACGGAATGAATCCTAGGGTTC
GTGGATCTGGCTTAGTACTGTTGGATGTGGATCTTGGTCTAGGTCCAGCGGTTTACTTGTCTA-----GGTTGA------
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>chr3B_1_TraesCS3B01G326400
CGCGATGGTGTTGGCTGGGTAAGGATGGTCATAGTGGGAGTAACATAGGTAACAACATAGATGCCACATAAGCAAAAATA
TTGATGTGGCAAGTAGTTAATGAGGAGAGAGGCAAATAGAGTAACCTAATATGTTACCATCACATAGCACTTTCCAATGC
AAAATGAGTCTACAAGATAATAAATGAACATGTGTATGTTACTACACATATGACACTTCTTACTATAAGGGTAGTAATAT
AAAGTAGTAACATATGCATATAAGGGTAGTAATATAAAGTAGTAACATATGCATATTACTACTTATTTTCACGCAGCCCA
TCTTAAGCCATCATAATTTAAGCTGATCAAAACAATTAAATTAGTCCTGCTTTAGTGAGCCACACCTCTATTGTAAAAGT
TTAAGCTAATCAAAATAATTATATTAGCTTTGGTTGGGGTGCACAACACCTGGAAAGTTTAAGCATATCCAGAAAACACG
TTCCATCCTCCATTACAAATTAATTGACCTCCATTTAACTAGATACAAATATACTCCCTCCGTCCGGAAATACTTGTCAT
CAAACTAGATAAAAGGGGATGTATGTAGATGTATTTTAGTTCTAGATACATCTCTTTTTATCCATTTTCATGACAAGTAT
TTTCGGACGGAGGGAGTAATAGATATACATATACATTTGTAGCTAGTGAAATGGGAATCAATCAATTTGGAATTAAGGGA
GTACGAATCAGAACGGGGCCCTGCCCCTCCA-------TTTATACCCGTCTGACCCTAGCCCGCCGAGCTCCGCAAGCTA
TGTGGGACTAATCGAACCGGTAGGTTTCGCGTCTGCGCCTCGTTCCCGACCGTTTGGGCAGAAGTAAAGAAGCCCAGCGA
GAAGATAAAAAGCCTCAAGGCCCATTTCCCCATCTCTATCATCGGCGGCGGCGGCTCGAGCAGAGGAAAGGAAGCTTTCT
ACCCTAGCAGAG-AAAAAAAAAGCAGAGGAGAGGAAGCGGAGGCGACGATGTCGGCGATGACTGCGGCGGTGCCCTTCTG
GCGCGCGGCGGGGATGACCTACATCGGCTACTCCAACGTCTGCGCGGCGTTGGTGCGGAGCTGCCTCAAGGAGCCCTTCA
AGACCGAGGTCTCCTCCCGCGAGAAGGTCCACTTCTCCCTCTCCAAGTGGACCGACGAGAAGCAGCAGAAGCCCAGTAAG
TTCCTCGATTCGATCAAGTCCCTGTCTCGCGTCCTCGATCCGGTTTGATTTGCCTGGTCACGGAATGAATCCTAGGGTTC
GTGGATCTGGCTTAGTACTGTTGGATGTGGATCTTGGTCTAGGTCCAGCGGTTTACTTGTCTA-----GGTTGATCTGCT
GGATTGAATACGATCTGATCAGTGATGATTTTTGGTTGGGCTGCGCGCCGTCGCGTGAATCTGTTCCACACCTGCGTAGA
AATGTGTGCGTCGTTGACGATGGCACAGATCTAGTGTGCGTCGTTTTTTCTTTTCCTGTTGGTAGAAATGTGCTGTGAAG
AGGGGGGGAAAACTGACATACGCAAAAGGATGATCTTAAAGTAAGCTGTCAGTGTAATATAC----AAGATTTTTGTGTC
ATCTGCGGCGGCGGCTGGTATCAGCTCACTTGAGATGTATTGGGAATTTTAATTCGCCCT-ATAGCCTGGAGCTGCTAGA
ATCGTAAGATTATGTTTTACAGTTTAGTACTAACTTAGTATTACTTATTTGCTGGAAAATAGAGATGAGTAACCATGAAT
GCATGAAGTAATACATAACGAGGATCCTACCCTGAGTGTGACCTTCCATAGGCTGGATTGGGTGGACATGATGGTGCTTA
TCGTCTCTGTTTTATGCATAATTTTACCAGATAA-AAAATATGCCTGTGTTCCTTTAAAACCAGGAGAAACTTGGTATTG
GTGGCTCTGTTTGAAGATTAACTGTAGGAACCCCACCTGAACTTCTATGCAGTCATAGTTATTGATTAATCTCTGCAAGC
TTTTTGCAATATACTTCTTTCCCCTGATGCAAGGAAAATATCATGAGCTTAATCTGTGGCACCACGT--CTGCTGCGTGC
ACAAGAGCATTCACGAACTCATGCTAACGATAAAGAAACCTCATGAATCAAAGGCATGTGCAAGTCTACTAATAGAGGGA
ATGGTGTGGTAATAATTAGCACCTGTAGTTTTCACTTTTCAGCGCCAATGCATCAGTACCTCATAGTTCTGCAAATGCCT
CAAGATTTGTCATACCCTATTTATATGATACAGAGCTGGTAGCAAAAGCAGAGGGAGTTTATTCAGCCGCATGCATGATT
GCATGTGAACACTGAGTAGTGATCTATAGCAATACTGATTTT
>chr3D_689
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------------------------------------------------AAATGGAAGTAAAGCAATTTGAAACGAAGGAA
ATATGAATGGAAACGGAGCCCTGCCCCTCGC-------TTTATACCCGTCCGACCCTGCCCCGCCGAGCTCCGCGAGCGA
TGTGGGACTAATCGAACCGGGAGGTTTCGCGTCTGCGCCTCGTTCCCGACTGTTTGGGCAGAAGCAAAGAAGCCCAGCGA
GAAGATAAAAGGCCTCAAGGCCCATTTCCCCATCTCTATCATCGGCGGCGGCGGCTCGAGCAGAGGAAAGGAAGCTTTCT
ACCCTAGCAGAGAAAAAAAAAAGCAGAGGAGAGGAAGCGGAGGCGACGATGTCGGCGATGACGGCGGCGGTGCCCTTCTG
GCGCGCGGCGGGGATGACCTACATCGGCTACTCCAACGTCTGCGCGGCGCTGGTGCGGAGCTGCCTCAAGGAGCCCTTCA
AGACCGAGGTCTCCTCCCGCGAGAAGGTCCACTTCTCCCTCTCCAAGTGGGCCGACGAGAAGCAGCAGAAGCCCAGTAAG
TTCCTCGATCCGATCAAGCCCCTGTCCCGCGTCCTCGATCCGGTTTGATTTGCCTGGCTACGGAATGAACCCTAGGGTTC
GTGGATCTGGCTTGGTACTGTTGGATGTGGATCTTGGTCTAGGTCTAGAGCTTTACATGTCTATGTTTGGTTGATCTGCT
GGATTGAATACGATCTGATCTGCAGTCATGTTTGGTTGGGCTGCGCGTCGTCGCGTGATTCTGTTGCACACCTGCGTAGA
AATGTGTGCGTCGTTGACGATGGCGCAGATCTAGTGTGCGTCGTTTTTTTC---CCTGTTCGTAGAAATGTGCTGTGAAG
AGGGGGGGAAA-CTGACCTACGCAAAAGGATGATCTTAAAGTTAGCTGTCAGTGTATAATATACTTAAGATTGTTGTGTC
ATCTGCTAAGGACTCTGGTATCAGCTCACATGAGATGTATTGGGAATTTTAACTCAGTCCGATAGCCTGGAGCTGCTAGA
ATCCTAAGATTATGTTTTACAGTTTAATACTAACTTAGTGTTACATATCTGCTGGAAAATAGAGATGAAT-ACCATGAAT
GCATGAAGTAATACATAACGAGGATCCTACCCTGAGTGTGACCTTGCATAGGCTTGATGA--------------TGCTTA
TCGTCTCTGTTTTATGCATAATTTTACCAGATAAAAAAATATATCTGTTTTCCTTTAAAACCAGGAGAAACTCGGTAGTG
GTGGCTCTGTTTGAAGATTAACTGTAGGAACCCCACCTGAACTTCTATGCAGTCATGGTTATTGATTAATCTCTGCAAGC
TTTTTGCAATATATTTCTTTCCCCTGATGCAAGGAAAATATCATGAGCTTAATCCGTGGCACCACGT--CTGCTGCGTGC
ACAAGAGCATTCACGAACTCATGCTAACGATAAAGAAACCTCATGAGGCAAAGGCATGTGCAAGTCTACTAATAGAGGCA
CTGGTGTGGTAATAATTAGCACCCGTAGTTTTCACTTTTCAGCGTCAATGCATCAGTACCTCATAGTTCTGCAAATGCCT
CAAGATTTTTCATACCCTATTTGTATGATACAGAGCTGGTAGCAA-AGCAGAGGGAGACTATTCAGCAGCATGCATGATT
GCATGTGAACACTGAGTAGTGATCTATAGCAATACTGATT--
>chr3A_689
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------------------------------------------------AAATGAAAGTCAAGAAACTTGGAACGAAGGAA
GCATGAATTGGAATGGAGCCCTGCCCCTCGCTTTATAGTTTATACCCGTCCGACCCTGCCCCGCCGAGCTCCGCGAGCGA
TGTGGGACTAATCGAACTGGGAGGTTTCGCGTCTGCGCCTCGTTCCCGACCGTTTGGGCAGAAGCAAAGAAGCCCAGCGA
GAAGATAAAAGGCCTCAAGGCCCATTTCCCCATCTCTATCATCGGCGGCGGCGGCTCGAGCAGAGGAAAGGAAGCTTTCT
ACCCTAGCAGAGAAAA--AAAAGCAGAGGAGAGGAAGCGGAGGCGACGATGTCGGCGATGACGGCGGCGGTGCCCTTCTG
GCGCGCGGCGGGGATGACCTACATCGGCTACTCCAACGTCTGCGCGGCGCTGGTGCGGAGCTGCCTCAAGGAGCCCTTCA
AGACCGAGGTCTCCTCCCGCGAGAAGGTCCACTTCTCCCTCTCCAAGTGGGCCGACGAGAAGCAGCAGAAGCCCAGTAAG
TTCCTCGATCCGATCAAGTCCCTGTCCCGCGTCCTCGATCCGGTTTGATTTGCCTGGCTACGGAATGAATCCTAGGGTTC
GTGGATCTGGCTTGGTACTGTTGGATGTAGATCTTGGTCTAGGTCTAGCGGTTTACATGTCTA-----GGTTGATCTGCT
GGATTGAATACGATCTGATCAGCGCTGATGTTTGGTTGGGCCGCGCGTCTTCGCGTGATTCTGTTGCACACCTGCGTAGA
AATCTGTGCGTCGTTGACGATGGCACAGATCTAGTGTGCGTCCTTTTTTTG---CCTGTTGGTAGAAATGTGTTGTGAGG
AGGGGAAAAAA-CTGACCTACGCAAAAGGATGATCTTAAAGTTAGCTGTCAGTGTAATATAC----AAGATTGTTGTGTC
ATCTGCTAAGGACTCTGGTATCAGCTCACTTGAGATGTATTGGGAATTTTAACTCATCCT-ATAGCCTGGAGCTGCTAGA
ATCGTAAGATTATGTTTTACAGTTTAGT----ACTTAGTATTACTTATTTGCTGGAAAATAGAGATGATTAACCATGAAT
GCATGAAGTAATACATAACGAGGATCCTACCCTGAGTGTGACCTTGCATAGGCTGGATTGGGCGGACATGATGGTCCTTA
TCGTCTCTGTTCTATGCAAAATTTTACCAGATAAAA-AATATATCTATATTCCTTTAAAACCAGGAGAAACT--------
GTGGCTCTGTTTGAAGATTAACTGTAGGAGCCCCACCTGAACTTCTATGCAGTCATGGTTATCGATTAATCTCTGCAAGC
TTTTCGCAATAGATTTCTTTCCCCTGATGCAAGGAAAATATCATGAGCTTAATCTGTGGCACCACGTGGCTGCTGCGTGC
ACTAGAGCATTCGTGAACTCATGCTGACGATAAAGAAACCTCATGTGGCAAAGGCATGTGCAAGTCTACTAATAGAGGGG
CTGGTGTGGTAATAATTAGCACCCGTAGTTTTCACTTTTCAGAGTCAATGCATCAGTACCTCATAGTTCTGCAAATGGCT
CAAGATTTGTCATTACTCTATTTGTTGATACAGAGCTGGTAGCAA-AGCAGAGGGAGTTTATTCGGCTGCATGCATGATT
GCATGTGAACACTAAGTAGTGATCTATAGCAATACTGATTT-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-S----S----------SS----S-
---S----SS------S------------SS-------------------S------SS---------------S---S-
--------------------S-------------------------------------------S---------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-------------------------------------------------S------------------------------
--------------------------------------------------S-----------------------------
---------S----------------S------------------------------SS---------------------
-------------S-------------------------------S----------S-----------------------
----------------------S-S----S-----------------S----------S------S--------------
-------------------------------------------------SSSSS--------------------------
-----------S-----S------------------------S-----------------------------S-------
------SSS--SSS--------------------------------------S--SS-----------------------
--------------------------------------------------------------------S-----------
---------------------------------------------S----------------S-----------------
------------------------------------------SS----S-----------------------S----S--
--------------------------------------------------------S-----------------------
-------------S------------------------------------------------------------------
----------------------------------------------SS--------------------------------
S----------------------S--------------------S-----------------------------------
----------------------S----------------------S---------------------S------------
-----------------------------------------S
>forward_550
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--------------------------------------------------ATACTCCCTCCGTCCGGAAA----------
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>reverse_1385
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------------------------ATGATTTTTGGTTGGGCTGCG-----------------------------------
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