>input_sequence_83240
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ATGGGCGCCACGTCGTACG
AGAGGCTGTCGAGCCACGCCGCCGGGAGCGGGCGCGGAGGGGGAGGGCTCGGGGCGTGGGCGGCGCTGAGGCGCGGGCTG
GCGCGGCTGTGCGCCGCGCGGCGCGGGCGGTGGGCGCCGGCGAGGGGCATGCTGGTGCGGGCGCGGGGGAGGAGCTGGCG
CGGCCGCAGGAGGGTGGCGGCCGGGTGCGGGTACGACTCCGAGGGCTACGCGCGCAACTTCGACGACGGGCTGTGGAAGG
CGGAGGAGGGCGCGCCGTGGAGGGCCGCGGGGCCGGCGATCGGCGCCTGCAGGCTCGCCCGCGCCGTGTCCTCCCTCCAG
TGA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>chr5A_1_TraesCS5A01G266800
CTGATTCCGATTCAAATTGAATTCTTTCTGTACAGGGAATTCTGAAGATGTGCG-------CAATAAAATGCATAGCAGC
TCATGCCGAGCTAAGGATTTTCAGTTTTTCATTGTGTGCATTATGGATGTTGTGCAAGTTTTTTCTTTTAGGTGGCGGGT
GGTGTGCAAGTGCAGCAGCTGCAAATGGAA--------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CTCAGCTGATGTAAGCTCGCCTGTCAGT
TGTCATTGTCTTGTCTG-----GTACACCATACCAGGCCCAGCTATGCACCTATGCTAGCAAGTCGTTAACCACTAGACC
AGCTCAGTGCTGGCGGTACGAATGTTCCGGTATTAATTCTCCAATATTTCTTTCCCTTACT-------------------
------------------TTCTAGACCAGCATTAGCATATCAGGCTATGTCGGTGTTCCAGCTAATTGGGCGCTAAGAAA
CTGTCAG----------------------------------------------------------------------CGG
CCATGACAGCCTCTCGATATTCCTGCCAACTTATATA-TATCTCAGCTCAATCAATTAACTAAGCTCCCCGTTCTTAACA
GCTACGAAAACTAGC-AATCTTCCCGGCTACTCCTGGAAATTTCCTTGTAAACAAAGTGTGGTGCAGCACATTGCTCGGT
TTAGTCCACAGAATGTGACCAACAGCC-----TGTGTACCAGAGCACTTTAC---GCCACTTTATTT--ATACAAACGTA
CACACGTCTTCTTGAGATGGCACCAAAAAATTCCAGCTTTGGGAACGGCCATTTGTTTAGGCTTGGAGCGCCATCAACGG
CTGGCCCATCTGGCAGCTGGGCAAGCGAGCGGAGAAACGGTCGTCGTCCTCCGGGCCAATTACGGGCCCCACGGCCCAGC
TCGGGCGAAAGCACCATGGAAACGCTCCCTCGAACGACACACCCCCGCA------GGAAACGCGCGTCCGTCCTCCGTCG
CCGTTGCCGCCACGTCTATAAAACCGCCCGCGACCGCTAGTCCAACGCCACCACCACACATCATC----ATCCATCGCA-
---------------CGAGCCGCG--GAGAGGAAGGCTTCCTGTCCTGTCGGTCGGTTGACATGGGCGCCACGTCGTACG
AGAGGCTGTCGAGCCACGCCGCCGGGAGCGGGCGCGGAGGGGGAGGGCTCGGGGCGTGGGCGGCGCTGAGGCGCGGGCTG
GCGCGGCTGTGCGCCGCGCGGCGCGGGCGGTGGGCGCCGGCGAGGGGCATGCTGGTGCGGGCGCGGGGGAGGAGCTGGCG
CGGCCGCAGGAGGGTGGCGGCCGGGTGCGGGTACGACTCCGAGGGCTACGCGCGCAACTTCGACGACGGGCTGTGGAAGG
CGGAGGAGGGCGCGCCGTGGAGGGCCGCGGGGCCGGCGATCGGCGCCTGCAGGCTCGCCCGCGCCGTGTCCTCCCTCCAG
TGATTCATTCTTTCG-GCGTTTTTGTGATCGCTCTGTGCGTTGTGAGCATGGGCGGAGCCCATTGGGCCGTCCCGTATGC
ACAGGAATACGGGTCCAAATATTTGCTAGTAGT-ATTTATCAACTAAAAAGGCCCAGTGCATCAGGTTGGGCCAAGAGCA
GTGCATCAGGGTCGGCCCTATTCGGCCACTCCTCCGGCCTGCTGCGTTACCGTGTTGGGCCAGTGCGGAAAACGCGAGCA
TACGCACCT-CCCC-TCCCGTAGCC-TAATCGATCCAACTTCCTCCACTTAAAAAACT------AAAAAAAT-CCATCCA
TCGATCAGGTCTGTGTAGACTAGACGCGTACAGATCCGGTCCCTCCATACGCCTCGCCCTCGCGTACACAGGCGGCGGCG
GCGGC------------GGCGGCGGCGGC---------------AGGGCACCGGCCGCCGGAC--------GCCGCAGGC
CACGAACCCCGAGTCCTTTGGTGATGACGCGATGCACGCGAGCGACGCCGCACGCCGTCGGCCGGTCCAGCGCTCCGTAA
TTTGGCAACCTTTCCAATCTTGAGTCCTCGTTTCCATGCGTATCAAAGGCCACAATGGTAACGCCTTTGTCTTGCCGTTC
CTAATTTTGTTTACAAACTGCAATGATTAGTCAATTATGTATAAACTAGTAACAAATAGAATAAACCACTATGTTTTGGC
AAAGCATGAGACATTTTCTAGGGTTATAACTTCTAAATTCTAATTAGGTTATATTTCATTCATTGTCAGATACAAATACT
ATAACTTCTAATTAGGTTATATTTCATTTATTCTCAAAAGAAAAGCATCATCACAGGATGTTCCGGAACACATAAATAGG
GAAGAGGAGATTCAATATCATCCGGGCAAGAGAAAATTGATCAAACGTACTAAAGGTAATTTCCAATTTTTTAGCCATTT
AAATACTTTCA--T--GGACATTTTATTATGTTTTACTAGAAAGTTTAATTCCATTTTTATCTTGTACATTAT-GTGCCC
TGCTGTCGGATGATG
>chr5B_1
CTGATTTTGATTCAAATTGGATTCTTTCTGTACAGGGAATTCTTAAGATGTGCGTTGTGCGCAATAAAATGCATAGCAGC
TCATGCCGAGCTAAGGATTTT-----------------CATTATGGTCGTTGTGCAAGTTTTTT----TAGGGGGCGGGT
GGTGTGCAAGTGCAACTGCTGCAAATGGGACTCAGGGGGTGTTTGGTTCAGGGACTTTTTAGTCCCAGAGACTAGAAAAA
GTCTCTAAAAAGTCCATAGGAATCAAACGGAAGGGACTTTTTCTACAGGATTAGAAAAAGACTCTACTGAAGAGTCTTTT
TTGATTAGTCGCTGGGACAAAAAAGTCCTAGGACTTTTAAACAAAACAACCCCTCAGCCGATGGAGGCTCGCCTGTCAGC
TGTCATTGTCTTGTGTGGTACAGTACACCATACCAGGCCCAGCTATGCAGCTATGCTAGCAAGTCGTTAACCACTAGACC
AGTTCAGTGCTGGCGGTACGAATGTTGCAGTATTGATTCTCCGATGTTTTCCCTTGA-----------------------
--------------TTTCTTCTAGGCCAGCATTAGCATATCAGGCTGTCTCGGTGTTCCAGCTAATTGGGCGCTAAGAAA
CTGTCAG----------------------------------------------------------------------CGG
CCATGACAGCCTCTCGGTATTCCTGCCAACTTATATA-TATCATC----------TTAACCAAGCTCCCCGTTCTTAACA
GCTACGAAAACTGGCAAATCTTCTCGGCTACTCCTGGAAATTTCCTTGTAAACAAAGCGTAGTGCAGCACATTGCTCGGT
TAAGTCCACCGAATGTGAGCAACAGCCTGTGTTGTGTACCAGAGCACTTTAT---GCCACTTTATTTTTATATAAACGTA
CACACGTCTT---GAGATGGCACCAAAAAATTCCAGCTTTGGGAACAGCCATTTGTTTAGCCTTGGAGTGCCATTAACGG
CTGGCCCATTTGGCAGCTGGGGAAGCGAGCGGAGAAACGGTCGTCGTCCTCCGGGCCACGCACGGGCCCCGCAGCCCAGC
TCGGGCGAAAGCGCCATGGAAACGCT--CTCGAACGACACACCCCCGCACCCGCAGGAAACGCGCGTCCGTCCTCCGTCG
CCGTTGCCGCCACGTCTATAAAACCACCCGCGACCGCGAGTCCAACGCCACCACCACCCATCATC----ATCCATTGCTC
CTGTGCGCCTACGTGCGAGCCGCAGAGAGAGGAAGGCTTCCTGTCCTGTCGGTCGGTTGACATGGGCGCCACGTCGTACG
AGAGGCTGTCCAGCCACGGCGCCGGGAGCGGGCGCCGCGGAGGAGGGCTAGGGGCGTGGGCGGCGCTGAGGCGCGGGCTG
GCGCGGCTGTGCGCCGCGCGGCGGGGGCGGTGGGCGCCGGCGAGGGGCATGCTGGTGCGGGCGCAGGGGAGGAGCTGGCG
AGGCCGCAGGAGGGTGGCGGCCGGATGCGGGTACGACTCGGAAAGCTACGCGCGCAACTTCCACGACGGGCTGTGGAAGG
CGGAGGAGGGCGCGCCGTGGAGGGCCGCCGGGCCGGCCATCGGCGCCTGCAGGCTCGCCCGCGCCGTGTCCTCCCTCCAG
TGATTCATTCTTTTCGGCG-TTTTGTGATCGCCCTGTGCGCTGTGAG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>chr5D_1
CTGATTCCGATTCAAATTGAATTCTTTCTGTACAGGGAATTCTGAAACAGGG--------GCAATAAAGTGCATAGCAGC
TCATGCCGAGCTAAGGATCTTGATTATCTGCATTTTA----------------------------------------GGT
GGTGTGCAAGTGCAACTGCTGCAAATGGGACTCAG---------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CCGATGGAGGCTCACCTGTCAGT
TGTCATTGTCTTGTCCG-----GTACACCATACCAGGCCCAGCTATGCAGCTATGCTAGCAAGTCGTTAACCACTAGACC
AGCTCAGTGCTGGCGGTACGAATGTTGAAGTATTAATTCTCCAATGTCTCCCCTTGCTTTCTTCTAGGCCATCCCTCAAA
AAATAAAAATAAACTTTCTTCTAGGCCAGCATTAGCATATCAGGCTATGTCGGTGTTCCAGCTAATTGGGCGCTAAGAAA
GGAAATGAATGTATCTACTCCTTCAAACAACAGGAAAGCAGACACGCATCCTACCCGCATCAATGCCTCTGCCCTCTCGG
CCATGACAGCCTCTCGATATTCCTGCCAACCTCTATAGTATCTCATCTTAATTAATTAACTAAGCTCCCCGTTCTTAACA
GCTACGAAAACTGGCAAATCTTCTCGACTACTCCTGGAAATTTCCTTGTAAACAAAGCGTGGTGCAGCACATTGCTCGGT
TTAGTCCACCGAATGTGACCAACAGCC-----TGTGTACCAGAGCACTTTATTATGCCACTTTA--TTTATACAAACGTA
CACACGTCTT---GAGATAGTACC-AAAAATTCCAGCTTTGGGAACAGCCATTTGTTTAGCCTTGGAGTGCCATTAACGG
CTGGCCCCTTTGGCAGCTGGGGAAGCGAGCGGAGAAACGGTCGTCGTCCTCCGGGCCACGTACGGGCCCCGCGGCCCAGC
TCGGGCGAAAGCGCCATGGAAACGCT--CTCGAACGACACACCCCCGCA------GGGAACGCGCGTCCGTCCCCCGTCG
CCGTTGCCGCCACGTCTATAAAACCACCCGCGACCGCGAGTCCAACGCCACCACCACACATCATCCATCATCCGTCGCTC
CTGCGCGCCTACGTGCGAGCCGCG--GAGAGGAAGGGTTCGTGTCCTGTCGGCCGGTTGACATGGGCGCCACGTCGTACG
AGAGGCTGTCCGGCCACGCCGCCGGGAGCGGGCGCCGCGGCGGAGGGCTAGGGGCGTGGGCGGCGCTGAGGCGCGGGCTG
GCGCGGCTGTGCGCCGCGCGGCGCGGGCGGTGGGCGCCGGCGAGGGGCATGCTGGTGCGGGCGCGGGGGAGGAGCTGGCG
CGGCCGCAGGAGGGTGGCGGCCGGGTGCGGGTACGACTCCGAGGGCTACGCGCGCAACTTCGACGACGGTCTTTGGAAGG
CGGAGGAGGGCGCGCCGTGGCGGGCCGCCGGGCCGGCCATCGGCGCCTGCAGGCTCGCCCGCGCCGTGTCCTCCGTCCAG
TGATTCATTCTTTTCCGCGTTTTTGTGATCGCCCTGTGCGTTGTGAG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>chrUn_1382
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TGACCAGGGGCGGAGCCCATTGGGCCGTCCCGTATGC
ACAGGAATACGGGTCCAAATATTTGCTAGTAGT-ATTTATCAACTAAAAAGGCCCAGTGCATCAGGTTGGGCCAAGAGCA
GTGCATCAGGGTCGGCCCTATTCGGCCACTCCTCCGGCCTGCTGCGTTACCGTGTTGGGCCAGTGCGGAAAACGCGAGCA
TACGCACCT-CCCC-TCCCGTAGCC-TAATCGATCCAACTTCCTCCACTTAAAAAACT------AAAAAAAT-CCATCCA
TCGATCAGGTCTGTGTAGACTAGACGCGTACAGATCCGGCCCCTCCATACGCCTCGCCCTCGCGTACACAGGCGGCGGCG
GCGGCGGCGGCGGCGGCGGCGGCGGCGGC---------------AGGGCACCGGCCGCCGGAC--------GCCGCAGGC
CACGAACCCCGAGTCCTTTGGTGATGACGCGATGCACGCGAGCGACGCCGCACGCCGTCGGCCGGTCCAGCGCTCCGTAA
TTTGGCAACCTTTCCAATCTTGAGTCCTCGTTTCCATGCGTATCAAAGGCCACAATGGTAACGCCTTTGTCTTACCGTTC
CTAATTTTGTTTACAAACTGCAATGATTAGTCAATTATGTATAAACTAGTAACAAATAGAATAAACCACTATGTTTTGGC
AAAGCATGAGACCTTTTCTAGGGTTATAACTTCTAAATTCTAATTAGGTTATATTTCATTCATTGTCAGATACAAATACT
ATAACTTCTAATTAGGTTATATTTCATTTATTCTCAAAAGAAAAGCATCATCACAGGATGTTCCGGAACACATAAATAGG
GAAGAGGAGATTCAATATCATCCGGGCAAGAGAAAATTGATCAAACGTACTAAAGGTAATTTCCAATTTTTTAGCCATTT
AAATACTTTCA--T--GGACATTTTATTATGTTTTACTAGAAAGTTTAATTCCATTTTTATCTTGTACATTAT-GTGCCC
TGCTGTCGGATGATG
>chr5B_1382
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TGAGCAGGGGCGGAGCCCATTGGGCCATCCCATATGA
ACAGGAATACGGGTCCAAATATTTGCTAGTAGT-ACTTATCAATTAAGAAGGCCCAGTGCATCAGGTTGGCCCAAGAGCA
GTGCATCAGGGTCGGCCCTATTCAGCCACTCCTCCGGCCTGCTGCGTTACCGTGTTGGGCTAGTGCGGAAAACGCGAGCG
TACGCACCA-ACCT-TGCCATAGCCTTAATCGATCCAACTTCCTCCACTTAATAAAAC------TAAAAAATACCATCCA
TCGATCAGGTCTGTGTAGACTAGACGCGTACAGATCTGGCCCCTCCATAAGCCTTGCCCTTGCGTACACA----------
-----------------GGCGGCGGTGGC---------------AGGGCACCGGCGGCCGGCCATCCCAT--------GC
CACGGACCCCGAGTCCTCTGGTGATGACGCGATGCATGCGAGCGACGCCGCACACCGTCGGCCGGTCCAGCGCTCCGTAA
TTTGGCAACCTTTCCAATCTTGAATCTTGGTTTCCATGCGTATCAAAGGCCACAATGGTAACACCTTTGTCTTGCCGTTC
CTAATTTTGTTTACAAACTGCAATGATTAGTCAGTTATGTATAAACTAGTAACAAATAGAATAAACCATTATGTTTTGAC
AAAGCATGAAACATTTTCTAGGGTTATAACTTCTAAATTCTAATTAGGTTATATTTCATTCATTGTCAAATACAAATACT
ATAACTTCTAATTAGGTTATATTTCATTTATTCTCAAAAGAAAAGCATCAGCTCAGGATGTTCTGGAACACATAAATAGG
GAAGAGGAGATTCAATATCACCCGGGCAAGAGAAAATTGATCAAACGTACTAAAGGTAATTTCCAATTTTTTAGCCATTT
AAATACTTTCA--TTTGGACATTTTATTATGTTCTATTAGAAAGTTTAATTTCATTTTTATCTTGTACATTATTGTGCCC
TGCTGTCGGAGGATG
>chr2A_1382
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TGTGCAGGGGCGGAGCCCATTGGGCCGTCCCGTATGC
ACAGGAATACGGGTCCAAATATTTGCTAGTATGGACTTATCAATTACGAAGGCCCAGTGCATCAGGTTGGCCCAAGAGCA
GTGCATCAGGGTCGGCCCTATTCAGCCACTCCTCCGGCCTGCTGCGTTACC--GTTGGGCCAGTGCGGAAAACGCGAGCA
TACGCACCT-CCCCCTCTCGTAGCC-TAATCGACCCAACTTCCTCCACTTATAAAAAAACTAAAAAAAAAAT-CCATCCA
TCGATCAGGTCTGTG----------GCGTACAGATCCGGCCCCTCCATACGCCTCGCCCTTGCGTACACA----------
-----------------GGCGGCGGCGGC---------------AGGGCACCGGCCGACGGCC--------GCCGCAGGC
TACGGACCCCGAGTCCTCTGGTGATGACGCGATGCACGCGAACGACGCCGCACGCCGTCGGCCGGTCCAACGCTCCGTAA
TTTGGCAACCTTTCCGATCTTGAATCTTCGTTTCCATGCGTATCAAAGGCCACAATGGTAACACCTTTATCTTGCCGTTC
CTAATTTCGTTTACAAACTGCAATGATTAGTCCGTTATGTATAAACTAGTAACAAATAGAATAAACCACTATGTTTTGAC
AAAGCATCATACATTTTCTAGGGTTATAACTTCTGAATTCTAATTAGGTTATATTTCATTCATTGTCAAATACAAATACT
ATAACTTCTAATTAGGTTATATTTCATTTATTCTCAAAAGAAA-GCATCAGCACAGGATGTTCCGGAACACATAAATAGG
GAAGAGGAGATTCAATATCATCCAGGCAAGAGAAAATTGATCAAACGTACTAAAGGTAATTTCCAATTTTTTAGCCATTT
AAATACTTTCATTT--GGACATTTTATTATGTTCTACTAGAAAGTTTAATTCCGTTTTTATCTTGTACATTATTGTGCCC
TGCTGTCGGAGGATG
>chr5A_1384
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------AGCAGGGGCGGAGCCCATTGGGCCGTCCCGTATGC
ACAGGAATACGGGTCCAAATATTTGCTAGTAGT-ATTTATCAACTAAAAAGGCCCAGTGCATCAGGTTGGGCCAAGAGCA
GTGCATCAGGGTCGGCCCTATTCGGCCACTCCTCCGGCCTGCTGCGTTACCGTGTTGGGCCAGTGCGGAAAACGCGAGCA
TACGCACCT-CCCC-TCCCGTAGCC-TAATCGATCCAACTTCCTCCACTTAAAAAACT------AAAAAAAT-CCATCCA
TCGATCAGGTCTGTGTAGACTAGACGCGTACAGATCCGGCCCCTCCATACGCCTCGCCCTCACGTACACA----------
-----------GGCGGCGGCGGCGGCGGC---------------AGGGCACCGGCCGCCGGAC--------GCCGCAGGC
CACGAACCCCGAGTCCTTTGGTGATGACGCGATGCACGCGAGCGACGCCGCACGCCGTCGGCCGGTCCAGCGCTCCGTAA
TTTGGCAACCTTTCCAATCTTGAGTCCTCGTTTCCATGCGTATCAAAGGCCACAATGGTAATGCCTTTGTCTTGCCGTTC
CTAATTTTGTTTACAAACTGCAATGATTAGTCAATTATGTATAAACTAGTAACAAATAGAATAAACCACTATGTTTTGGC
AAAGCATGAGACATTTTCTAGGGTTATAACTTCTAAATTCTAATTAGGTTATATTTCATTCATTGTCAGATACAAATACT
ATAACTTCTAATTAGGTTATATTTCATTTATTCTCAAAAGAAAAGCATCATCACAGGATGTTCCGGAACACATAAATAGG
GAAGAGGAGATTCAATATCATCCGGGCAAGAGAAAATTGATCAAACGTACTAAAGGTAATTTCCAATTTTTTAGCCATTT
AAATACTTTCA--T--GGACATTTTATTATGTTTTACTAGAAAGTTTAATTCCATTTTTATCTTGTACATTAT-GTGCCC
TGCTGTCGGATGATG
>chr5B_1384
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------AGCAGGGGCGGAGCCCATTGGGCCGTCCCGTATGC
ACAGGAATACGGGTCCAAATATTTGCTAGTAGT-ACTTATCAATTACGAAGGCCCAGTGCATCAGGTTGGCCCAAGAGCA
GTGCATCAGGGTCGGCCCTATTCAGCCACTCCTCCGGCCTGCTGCGTTACCGTGTTGGGCCAGTGCGGAAAACGCGAGCA
TACGCACCTCCCCC-TCTCGTAGCC-TAATCGATCCAACTTCCTCCACTTATAAAAAAACT-AAAAAAAAAT-CCATCCA
TCGATCAGGTCTGTG----------GCGTACAGATCCGGCCCCTCCATACGC-TCGCCCTTGCGTACACA----------
-----------------GGCGGCGGCGGC---------------AGGGCACCGGCCGACGGCCGCCGCACGGCCGCAGGC
TACGGACCCCGAGTCCTCTGGTGATGACGCGATGCACGCGAACGACGCCGCACGCCGTCGGCCGGTCCAACGCTCCGTAA
TTTGGCAACCTTTCCGATCTTGAATCTTCGTTTCCATGCGTATCAAAGGCCACAATGGTAACACCTTTATCTTGCCGTTC
CTAATTTCGTTTACAAACTGCAATGATTAGTCCGTTATGTATAAACTAGTAACAAATAGAATAAACCACTATGTTTTGAC
AAAGCATCATACATTTTCTAGGGTTATAACTTCTGAATTCTAATTAGGTTATATTTCATTCATTGTCAAATACAAATACT
ATAACTTCTAATTAGGTTATATTTCATTTATTCTCAAAAGAAA-GCATCAGCACAGGATGTTCCGGAACACATAAATAGG
GAAGAGGAGATTCAATATCATCCGGGCAAGAGAAAATTGATCAAACGTACTAAAGGTAATTTCCAATTTTTTAGCCATTT
AAATACTTTCATTT--GGACATTTTATTATGTTCTACTAGAAAGTTTAATTCCGTTTTTATCTTGTACATTATTGTGCCC
TGCTGTCGGAGGATG
>chr1D_1389
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GGGCGGAGCCCATTGGGCCGTCCCGTATGC
ACAGGAATACGGGTCCAAATATTTGCTAGTAGT-ATTTATCAACTAAAAAGGCCCAGTGCATCAGGTTGGGCCAAGAGCA
GTGCATCAGGGTCGGCCCTATTCGGCCACTCCTCCGGCCTGCTGCGTTACCGTGTTGGGCCAGTGCGGAAAACGCGAGCA
TACGCACCT-CCCC-TCCCGTAGCC-TAATCGATCCAACTTCCTCCACTTAAAAAACT------AAAAAAAT-CCATCCA
TCGATCAGGTCTGTGTAGACTAGACGCGTACAGATCCGGCCCCTCCATACGCCTCGCCCTCGCGTACACA----------
-----------------GGCGGCGGCGGCGGCGGCGGCGGCGGCAGGGCACCGGCCGCCGGAC--------GCCGCAGGC
CACGAACCCCGAGTCCTTTGGTGATGACGCGATGCACGCGAGCGACGCCGCACGCCGTCGGCCGGTCCAGCGCTCCGTAA
TTTGGCAACCTTTCCAATCTTGAGTCCTCGTTTCCATGCGTATCAAAGGCCACAATGGTAACGCCTTTGTCTTACCGTTC
CTAATTTTGTTTACAAACTGCAATGATTAGTCAATTATGTATAAACTAGTAACAAATAGAATAAACCACTATGTTTTGGC
AAAGCATGAGACCTTTTCTAGGGTTATAACTTCTAAATTCTAATTAGGTTATATTTCATTCATTGTCAGATACAAATACT
ATAACTTCTAATTAGGTTATATTTCATTTATTCTCAAAAGAAAAGCATCATCACAGGATGTTCCGGAACACATAAATAGG
GAAGAGGAGATTCAATATCATCCGGGCAAGAGAAAATTGATCAAACGTACTAAAGGTAATTTCCAATTTTTTAGCCATTT
AAATACTTTCA--T--GGACATTTTATTATGTTTTACTAGAAAGTTTAATTCCATTTTTATCTTGTACATTAT-GTGCCC
TGCTGTCGGATGATG
>chr1B_1389
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GGGCGGAGCCCATTGGGCCGTCCCGTATGC
ATAGGAATACGGGTCCAAATATTTGCTAGTAGT-ACTTATCAACTAAAAAGGCCCAGTGCATCAGGTTGGGCCAAGAGCA
GTGCATCAGGGTCGGCCCTATTCGGCCACTCCTCCGGCCTGCTGCGTTACCGTGTTGGGCCAGTGCGGAAAACGCGAGCG
TACGCACCT-CCCC-TCTCGTAGCC-TAATCGATCCAACTTCCTCCACTTAAAAAACT------AAAAAAAT-CCATCCA
TCGATCAGGTCTGTGTAGACTAGACGCGTACAGATCCGGCCCCTCCATACGCCTCGCCCTCGCGTACACA----------
-----------------GGCGGCGGCGGC---------------AGGGCACCGGCCGCCGGAC--------GCCGCAGGC
CACGAACCCCGAGTCCTTTGGTGATGACGCGATGCACGCGAGCGATGCCGCACGCCGTCGGCCGGTCCAGCGCTCCGTAA
TTTGGCAACCTTTCCAATCTTGAGTCCTCGTTTCCATGCGTATCAAAGGCCACAATGGTAACGCCTTTGTCTTGCCGTTC
CTAATTTTGTTTACAAACTGCAATGATTAGTCAATTATGTATAAACTAGTAACAAATAGAATAAACCACTATGTTTTGGC
AAAGCATGAGACATTTTCTAGGGTTATAACTTCTAAATTCTAATTAGGTTATATTTCATTCATTGTCAGATACAAATACT
ATAACTTCTAATTAGGTTATATTTCATTTATTCTCAAAAGAAAAGCATCATCACAGGATGTTCCGGAACACATAAATAGG
GAAAAGGAGATTCAATATCATCCGGGCAAGAGAAAATTGATCAAACGTACTAAAGGTAATTTCCAATTTTTTAGCCATTT
AAATACTTTCA--T--GGACATTTTATTATGTTTTACTAGAAAGTTTAATTCCATTTTTATCTTGTACATTAT-GTGCCC
TGCTGTCGGATGATG
>SNPs
--------------------------------------------------------------------------------
---------------------S-S-S-S-SSS-S-SSS--------SS----------------SSSS----S-------
--------------S-S-----------S---------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S----S-S--------------
-------------------------------------------------S------------------------------
--------------------------S-S----------------S----SSSSSSS-SSS-------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S--S---S---------------------------
------------S----------S---------------------------------S----------------------
---------S-----------------------------------------S----------------------------
----------SSS---------------------------------S-------------S-------S-----S-----
---------S-----------S------------------------------------SS----------S---------
------------S-------------SS----------------------------------------------------
-------------------------S-----------S----------------------------------------S-
--------------------------------------------------------------------------------
----------S------------------------S-S--S--------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S--------S------------------------------------------
-------------SS-----------------S----------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>forward_1147
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------AAAGCACCATGGAAACGCTC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>reverse_2040
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TCCCTCCATACGCCTCGC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
