>input_sequence_83185
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------------ATGGAGAAGGTTGCCGTGGCAGCGGCGAAGACGGCGCAC---CCGCCGCCGTCGCCGGGGAAGCCGAC
GACGCTGCTGGACGTGCACGAGGTGGAGTGGATCACGCGGGAGCTGGAGCGGCTGCTCGTCAGGGAGACCGTTGGCGCGG
GCGCCCGCGCGGACGCGCGCCGCCGCCGGAAGAGGGCCGAGGCGGGGGTTTCCAGCAGCCCCGAGGCGCACGCGAAGAAG
GGAGGCTTCCTGGCCGAGCTCCTCGGGAAGCACGCGGCCTCCATATGCGGCGACGGT------------GCCGTGGTCAG
CGGGCGCCGGCGCCGCGGCCGGAGCGGCTTCCGGGAGGTCGATAAGGTCTAG----------------------------
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>chr6D_1_TraesCS6D01G278400
CGTCAGCCTGGCCGGTGGGTCCGATCTGTCGGTTTCGTTGTTTTCCCGAGTAAATGAGACAATCAGTGCTCCGCGTTATA
GATTAGCCTCATTGTTGGTGGTTTTTTGTGCTCTGTCTCAAATCTGATACCGATCTGTTACCATAGCCCATAATGTGGTG
GTTTTGGGTAAATAACTCTCTATGCAGCCACCACCACTGGGTTAAATTAACCATCTCGGAGCGTAATCTAATCATTGCGC
GTGTCGTGTTTACCTGTCTGCACGTTGAGAGCCCGTAAACA----ACCCACAAATGGACCCTTTGATCACGTCGTGTCTC
CCCGTAAATGCAGCTAAGCTAACGACCAATCGTACGAGTTACCAGCCACCAATGCAGCCAGTAGCAACTAACCTTAACTT
TGACAGAGTGCTTCCCATAACTTATCCAAACTGATGGTTGCGATCCACGAAAACCCTTGTCATTCAAATTTGAATGTAGG
TTCTGCTTGGATATAGGATACGAACTGGAGA--CTCTGAATGCCTGCAAATGCTGGCACTCCTCGCACATAGG-GGGTAC
GGACGTTAGGT----CTGGATTTGAATTGAATTTACC-------------------------AAACGGAGGTCGCAGCTG
TACGCGGCAGTGTCTATTGCAAC-TTGCAACAAGAAACAGAGAAGAAACAGGCGATGCGAGGAGCACGGGCAGGAGCCAA
CTA---CGCCTCCTTTGCCGGTGTAACTAAAACAGCGCATTTCC-------CTACTGCCACGCACGCACGACCCGCGGGA
ACCATAACTAG----TGGGGGAGCTCAGAGGGGTTGACCACGCGTCCTCACGTACTCGCGCGGCATGAATGCCGCCGGCC
CCACGCCGTCAGCCTCTGCGCCCCA-TCGCCTTACTTTAAGCAACCAGCGGGCCTGCCATCCTCGCCTCCTCTCCTCCAC
CGACTTGACTTCTTCTCCTCCTCCTCCTCCTCTCACAAGTCACAACTCACAACCCGTCAATCTCATCTCACTGACTCGCC
TGTCCAATCTCCATGGAGAAGGTTGCCGTGGCAGCGGCGAAGACGGCGCAC---CCGCCGCCGTCGCCGGGGAAGCCGAC
GACGCTGCTGGACGTGCACGAGGTGGAGTGGATCACGCGGGAGCTGGAGCGGCTGCTCGTCAGGGAGACCGTTGGCGCGG
GCGCCCGCGCGGACGCGCGCCGCCGCCGGAAGAGGGCCGAGGCGGGGGTTTCCAGCAGCCCCGAGGCGCACGCGAAGAAG
GGAGGCTTCCTGGCCGAGCTCCTCGGGAAGCACGCGGCCTCCATATGCGGCGACGGT------------GCCGTGGTCAG
CGGGCGCCGGCGCCGCGGCCGGAGCGGCTTCCGGGAGGTCGATAAGGTCTAGATTGGAGCGTCGGTACGGTGTACGTATG
GCAAGTAGGTATCGTCGGCGTAAGTCTGGTACTGCAATTTGTCTGTCAATTTCTCTGCGTAGCGAGTGGGGCTTGTAGGC
TGGAATTGCCAGCGAAC-------------------ATAGTAGGATTTGATTACTACTACTCCTGTAAGAAAGGTTCGCT
CACTTTTATCCTGCACTTTTCCTGTTATTATCCAACATGTAAATACGAACGTGGAATTTGTGTCCTGCTCGCCTGCGGTG
CCTATTTTTGCTTCCGATTTTGCTGATCAGCTGCGTG----TTTTTTTCTGAGTTACTTCGAAATGCGACTGAAATTTAA
T---AAAATTTTCAGACAAATTTCTGTTTCTGCACGATTTGCCTGCCCGATAGTAATGCGACTGAAATTTAATAAAATTT
TCAGACAAATCAATAGCGGCCTCTTTTGTTTCTGTTTCTCCACGAGTTGCCTGCCCGATAGTAATGCGACTGAAATTTAA
TAAAATTTTCAGACAAATCAATAGCGGCCTCTTTTGTTTCTGTTTCTCCACGAGTTGCCTGCCCGATAGCAATGCGATTG
AAATTTAATAAAATTTTCAGACAAATCAATAGCGGCCTCTTTTGTTTCTTTTTCTGCACGAGTTGCTTGCCCGATAGCAA
TGCGACTGAAATTTAATAAATTTTTAAGACAAATCAATAGCGGCTTCTTTTGTTTCTGTTTCTGCAC-GAGTTGCCTGCC
CGATAGCAACGTGGTGCGCTGTCGTACGCATCTTCAAGGAATGT--AATTAGAATCACGCTGTTGTTGGCATGTTCATGA
AATGCACTCCCTCCATCCCATAATGTAAGACGTTTTTTGACATGATGAAGGAAGTAATTTGCAACTGGTAAATTCTGCAG
CGTGTTAGATTTGGTAAATTTCAGGCAAAACCGGTAAATTTTCAGCAAG---AAAAACCCTCTGCTGATGTTGCTAGTAC
TGCCCTTTGTGTGTTGAGCCTAGAGTGTAAAA-CGGAAGAGATTG
>chr6A_201
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----------------------------------------GTTAAATTAACCATCTCGGAGTGTAATGTAATCATTGCGC
CTGTCGTGTTTACCTGTCTGCACGTTGAGACGCTGTAAACAAACAACCCACAAATGGACCCCTTGACCACGTCGTGTCTC
CCCGTGAATGCGGCTAAGCTAACGACCAATCGTACGAGCTACCATCCACCAATGCAGCCAGTAGCAACAAACCTTAACTT
TGACAGAGTGCTTCCCATAACTTATCCAAACTGATGGTTGCGATCCACGAAAACCCTTGTCATTCAAATTTGATTGTAGG
TTCT--------------TACGAACTGGAGG--CTCTGAATGCCTGCAAATGCTGGCACTCCTCGCACATAGGGGGGTAC
GGACGCTAGGTCTGTCTGGATTTGAATTGAATTTGCC-------------------------AAACGGAGGTCGCAGCTG
CACGCGGCAGTGTCTGTTGCAAC-TTGCAACAAGAAACAGAGAAGAAACAGGCGGTGCGAGGAGCACGGGCAGGAACCAA
CGG---CGCCTCCTTTGCCGGTGTAACCAAAACAGCGAGTTTCCTTCCCCTCTACTGCCACGCACGCACGACCCGCGGGA
ACCATAACTACGTACTGGGGGAGCTCAGAGGAGTTGACCACGCGTCCTCGCGCGGCATGAT--CATGAATGCCGCCGGCC
CCACGCCGTCAGCCTCTGCGCCCCCGTCGCCTTACTTTAAGCAACCGGCAGGCATGCCATCCTCGCCTCCTCTCCTCCAC
CGACTTGACTTC--------------CTCCTCTCACAAGCCACAATCT-------GTCAATCTCATCTCGCTGACTCGCC
T-----CG--CCATGGAGATGGAGAA---GGCAGCGGCGAAGACGGCGCA------------------------GCCGAC
GACGCTGCTGTACGTGCACGAGGTGGAGTGGATCACGCGGGAGCTGGAGCGGCTGCTCGGCAGGGAGACCGTTGGCGCCG
GCGCCCGCGCGGACGCGCGCCGCCGCCGGAAGAGGGCCGAGGCCGATGCGGCCAGCAGCCCCGAGGCGCGCGCGAAGAAG
GGAGGCTTCCTGGCCGAGCTCCTCGGGAACCACGCGGCCTCCATATGCGGCGACGGT------------GCCGTGGTCAG
CGCGCGCCGCCGCCGCGGCCGCAGCGGCTTCCGGGAGGTCGATAAGGTCTAGATTGGAGCGTCGGTACGGTGTGCGTTTG
ACAC---GGTATCGTCGGCGCAAGTCTGGTCCTTCGATTTGTCTGTCAATTTCTCTGCGTAGCCAGTGGGACTTATAGGC
TGGAATTGCCAGCGAAC-------------------ATAGTAGGATTTGATTACTGCTCCTCCTGTAA-----GTTCGCT
CACTTTCATCCTGCACTTTTCCTGTTA---TCCAACATGTAAATACGAACGTGGAATTTGTGTCCTGCTCGCCTGCACTG
TCTATTTTTTCAGCCTC--------------------TTTTTTTTGGTGTGTGGTACTTAGAAATGCGACTGAAATTTAA
T---AAAATTT---------------------------------------------------------------------
-CAGACAAATCAGTAGCGGCCTCTTTTGTTTCTGTCTCT-----------------------------------------
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---------------------------------------------------------------GCAC-GAGTTGCCTGCC
CGATAGCAACGTGGTGCGCTGTCGCACGCATCTTCAAGGAATGTGTAATTAGAATCACGCTGTTGTTGGCATGTTCATGG
AATGTACTC-----------------------------------------------------------------------
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>chr6B_434
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-------------------------------------TTGCGATTCACGAAAACCCTTGTCATTCGAATTTGAATATAGG
TTATGCTTGGATATAGGCTACGATTTGGAGAGACTCTGAATGCCTGCAAGTGCTGGCACTCCTAACACATAGGTGTC---
------------------GATTTGAATTTACCAGATAGAGGTCCCAGCTAATTTAAAAAAAAAAATAGAGGTCGCAACTG
TATGCGGCAGTCGGGCAGTGTCTATTGCAACAAGAAACAGAGAAGAAACAGGCGA-----GGAGCACGGGCAGGAGCCAA
CCGCATCGCCTCCTTTGCCGGCGTAACCAAAACAGCGTGTTTCCATTCCCCCTACTGCCACGCACGCACGACCCGCGGGA
ACCATAACTAC----TGGGGGTGCTCAGAGGAGTTGACCACGCGAACTCGCGTACTCGCGCGGCATCAATGCCGCCGGCC
CCACGCCGTCAGCCTCTGCGCCCCA-TCACCTTACTTTAAGCAACCAGCGGGCATGCCATCCTCGCCTCCTCTCCTCCAC
CGACTTGACTTCT------CCTCCTCCTCCTCTCACAAGTCACAATCT-------GTTAATCTCATCTCGCTGACTCGCC
TCGCCTCG--CCATGGAGAAGGTGGCCGTGGCAGCGGCGAAGACGGCGCACCCGCCGCCGCCGTCGCCGGGGAAGCCGAC
GACGCTGCTGGACGTGCACGAGGTGGAGTGGATCACGCGGGAGCTGGAGCGGCTGCTCGTCAGGGAGACCGTTGGA----
--GCCGGCGCGGACGCGCGCCGCCGCAGGAAGAGGGCCGAGGCCAAGGCGGC---CAGCCCCGAGGCGCACGCGAAGAAG
GGAGGCTTCCTGGCCGAGCTCCTCGGGAAGCACGCGGCCTCCATATGCGGCGACGGTGCCGTTTCCGGCGCCGTGCTCAG
CGCGCGCCGCGGCCGCGGCAGGAGCGGCTTTCGGGAGGTCGATAAGGTCTAGATTGGAGCGTCGGCACGGTGTGCGTGTG
ACAC---GGTATCGTCGGCGTAAGTCTGGTTCTGCAATTTGTGTGTCAATTTCTCTGCGTATCGAGTGGGACTTGTAGGC
TGGAATTGCCAGTAGTTGGCTTGCAGCGAACATAGTATAGTAGGATTTGATTACTTGTAATCCTGTAAGAAAGGTTCGCT
CACTTTCATCCTGCACTTTTCCTGTTA---TCCAACATGTAAATACGAACACGGAATTTGTGTCCTGCTCGCCTTCAGTC
TCTATTTTTTCTTCCGATTTTGCTCATCTGCGTGGGTTTTTTTTTTTTTTGCGTTACTTCGAAATGCGACTGAAATTTAA
TGTAAAATTTT---------------------------------------------------------------------
-CAGACAAATCAATAGCGGCCTCTTT-GTTTCTGTTCCT-----------------------------------------
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---------------------------------------------------------------GCACTGAGTTGCCTGCC
CGATAGCAACGTGGTGCGCTGTCGTACGCATCTTCAAGGAATGT--AATTAGAATCACACTGTTGTTGGTATGTTCATAG
AATATATCCCCTCCGTCCCATAATGTAAGACATTTTCTGACAC-----------TAATTTGCAACTGGTAAATTCTGCAG
CGTGTTAGATTTGATAAATTTCAGGCAAAATCAGTAAATTTTCAGACAAGAAAAAATACCTCTGCTGATGCTGCTAGTAC
TGCCCTTTGTTTGTTGAGCCTAGAGTGTAAAATCGGAAGAGATTG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S-----S------------
S-----------------------------SS-S---------------------------S----S-------------
-----S-----S--------------------------S-----S-----------------------S-----------
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-----------------S--------------------------------------------------------------
-----S--------------------------------------------------------------------------
---------------S----------------------------------------------------------------
-SS------------------------S---------SS-----------------------------------------
----------S--------------------S-----------------S------------------------------
-----------------------------------------------------S--------------------------
-------------SSSSSS--------------------------SSSSSSSSSS--------------S----------
-SS--SSSSS-------------S--------------------------------------------------------
------------------------------------------------------------------------------S-
-------------------------------------------S-S--SSS-----------------------------
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--S------S---------------------------------------------------------------S---S--
S--SSSS-----------------------S---------------------------------------S---------
-------------------------------------------------------S------------------------
------S--------------------SSS----------------------------------------------S---
S--------S--------------S---S--SSS-SS-----------S--S----------------------------
-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S--------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
-------------------------------------------------------------------------------S
----S---------S----------------S----S-----SSSSSSSSSSSS--------------------------
-------------S----------------S-S------------SS-S-------SS------------S---------
----------S----------------------------------
>forward_271
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-----------ACCTGTCTGCACGTTGAGAG-------------------------------------------------
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>reverse_1981
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------------------------------------------------------------GCCCGATAGCAATGCGATTG
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