>input_sequence_83114
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------ATGAGGACCTGCAGTCTCCTGCTCATCATTA
TCGCCGTTGTTGATGTGGCTTATCCCGTTGCCACGTCCGCCCAAGTAGCATGGTATCCAATTGGGGACGTCAACAATGAA
CCGCACGTCCAAAAGCTCGGCGGGTGGGCAGTGGCGGAGCACGTCAAGCAGGTGCACGATGGGCTCAAGTTCATCAAGGT
GATGAGCGGTGAAAAGGCACCTGATGCCGGTGTGAAATATCACCTCATCATCAAAGCATTCAACAGCAACGACAAACCTG
CTAGATACGAAGCATATTTGGTTGAGGAGGCTAGGAGCAACACGCGCACCCTCATCTTCTTTAGCCCCGTGAACTAA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr7B_1_TraesCS7B01G297500
CGATGAAAGGTAAAGGAAATAAAATATCAAACAAATTCAAAAAAAATAG--------TATGCATCAAAGATGAAGGACTC
TTCTAGGTGCGTACAAATTTTCACACTGAGATGACATCCGAGGAGCCTGGTACAAAA-ACACAGAATCGAAGCTCGAATT
TTTT--GTGCAACTT--CATCTTTTGATCTTTCATTTTGTTTTCTTTGTACCGAACTCCTCAGATAGCATGTCAGCGTGG
AACTTCGCAACCACCTAGAAGAATCTCTCATTTTTCATGTGTAGTTTT-TTTAGCTTGTTTTAAACAGGTTATCATTTCG
AATTACTTCACTCGGTGCAGATGTACTTGAGCTCCTAACGCTACTCTCCTTGTGATTCCTTTTTTTTTTGC------GGA
TACATTATACACTA-GGAATCTTATTTTACCATATATCATTTCGCACGTGCATATGAGTTTTTCACTGAATCGTACATTC
CAAGATCATAGCAGTTATACCATAGAATATAAGCTCGTAATTATGAATAATAGAAATATAAATAATACAATATTATTGCC
TCTAGGGCATATTTCCAACAACCGCGTTGTCCTAATCGACAAACACCATTTGTGGATTCTAGGTCGGTGCACAGTTGGCC
ATTGTACACCTTTGGAATAGATCGATG-TCGTCTTATTTTGAAAAGTAACTTGGTCTATGAATATACCGATAGAATTCAA
GCCTCTTACAACAGCTGGAAAAAAAATCCATCAATGATATTATGTGAATTTCTAAATGATTACACTTCATTTTAGGAAGT
ACTTTAGTACAACAATTTGGATATGCATCTAATTGATAGATACTACTGAATTGCTTATGGTGGATATGTATACAATTAAT
ATCTGCCTTGCAATGGCCATATATATTTAGATGTCATGCACATCATTCACCT--AATCATCACAACAACAAGAA-CCTTG
ATT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GATCCCAAAGCTGC
ATAAGCGCATCCATCAACCCAAAGTCGTACCATCACAAATCTGTCACC-ATGAGGACCTGCAGTCTCCTGCTCATCATTA
TCGCCGTTGTTGATGTGGCTTATCCCGTTGCCACGTCCGCCCAAGTAGCATGGTATCCAATTGGGGACGTCAACAATGAA
CCGCACGTCCAAAAGCTCGGCGGGTGGGCAGTGGCGGAGCACGTCAAGCAGGTGCACGATGGGCTCAAGTTCATCAAGGT
GATGAGCGGTGAAAAGGCACCTGATGCCGGTGTGAAATATCACCTCATCATCAAAGCATTCAACAGCAACGACAAACCTG
CTAGATACGAAGCATATTTGGTTGAGGAGGCTAGGAGCAACACGCGCACCCTCATCTTCTTTAGCCCCGTGAACTAAGCG
ATGACCAACTGGGTGGATAGTA-TTTTGGATGTAATAAACATGTACTGATGAGAATAAATAATTTTTGTAAGCAATATGG
AAAAA-TATTTG-AATTTGAGATAACAAGTTTTTGGTCTACAAATTTCAAAACGGTAGGTTT------------------
-------------------------------------------------------------------GCTCCATCATTAA
ATTGTCAACATTAAAAAGTTCCCCAGAAGAAAAACTGATTGTCATATTGCATCTCGACTTTTCTCGGCATTATACT----
----TGGCTTGCAATTTCTTGGTGCTAT-------GTACTATAGGCTACCACGCACATCGTCGCATCGTTCTTCACTTGT
GGGATTAATCTCTCTCGTAGATTATTGTAGTTGATTGTTTTTTTTTGACTTTATCTGTGTTGGGTTGGTTTTTAACTATA
TTTTGGTTTTATTTTTTCCATTCTTATATTGTGTTGGGCTACCTTTGGAGACGGTATTTGATCTGAAAGGAGAGTGAACT
TGTTCTAGCGTGGTTATGGTGTCCTTACATGTTTCGGCTTTGGTGTCAGCCAAAGGTGATTGTGTGAGCCCGTTGGGGGA
CTATATTCCACATTCAAACAGTGGAATTGCTAGTACAAAAATGTTACTCATGTTTCAGAAATCTAAGTCTGACCCCGAGC
TCATGCTCCCCCAATGAAAGGTAAGGAAATAAAATGTCAAACAAATTCAAAAAAATCTTTAAAAATTACGCATCAAAGAT
GAAAGACTCTTCTAGTGCGTACAAACTTTTGCACTGAGATGGCATCCGAGGAGCTCGGTATACCAAAAAACAGAATCAAC
GATCAATTTATTTTTTTGCAGCTTTGGACATTTTTTTAGCTTTCATTTCGTTTTCTTTGTACCGAGCTCCTCGAATGTAA
TGTCAGCGTGAAACTTTGCAAGCACCTAGAAGAATCTCTCATCTTTGATGTGTAAAAAATCATTTAAAAAATGTGTTAGG
TATTTTTTTTGAATTACTTCACTTGGGTGCATCTCATGGTTTCCAATTCTTCTTTTTTTC
>chr7A_5
----GAAAGGTAAAGGAAATAAAATATCAAACAAATCCAAAAAAATCTAAAAAGAATTACGCATCGAAGATGAAAGACTC
TTGTAAGTGCGTGCAAATTTTCACACCGAGACGGCATCCGAGGAGCTCAGTACAAAACAAACATAATCAGAGATCAATTT
TTTT--GCAGCTTTGGGCATTTTTTGAGCTTTTATATTGTTTTCTTTGTGCCAAGCTCCTCAGATGTCATGTGAGCGTGA
AACTTTGCAACCACCTAGAAGAATCTCTCATCTTTCATGTGTAGTTTTCTTTAGCTTTTTTTAAACGGGTTGTCTTTTTG
AATTACTTCACTTGGTGCAGATGTACCCGAGCTCCTAACATTACTATCCTTGTGATTCCTTTTTTTTTTTTTGCCATGGA
TACATTATACACTA-GGAATCTTATTTTACCGCTTGTCATTCCGCACGTGCATATGAGTTTTCTACTGAATCGTATATTC
CAAGATCATAGCAGTTATAGCATACAATATAAGTTCGTAATTATGAAT-ATATAAAATAATATAATATAATATTATTACC
TTTAGGTCATATTTCCAACAATCGCGTTGTCTTCATCGACCAACGCCATTTGTGGATTCTAGGTCGGTGCACAATTGGCC
AATGTACACCGTTGGAATAGGTCGATG-TCGTCTTATTTTGAAAAGTAACTTGGTCTATGAATATACCAATAGAATCCAA
GCCTTGAAACAGCAG----AAAATAATCCATCAATGATATCATGTGAATTTCTTAATGACCACACTTCATTTTAGGAAGT
ACTTTAGTACAACAATTTGGATATGCATCTAATTGATTGATACTACTGAATTGCTTGTGGTGGATATGTATGCAATTAAT
ATCTACCTTGCAATGGCCATATATATTTAGATGTCATGCACCTCATTCACCT--AACCAGCACAACAACAAGAA-ACTTG
ATT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GATCCCCAAGCTAC
ATAAGCGCATCCATCAACCCAAAGTCGTACCACCATAAATCTGTCACC-ATGAGGACTTGCAGTCTCCTTCTCCTCATTG
CCGCCACTGTTGCAGTGGCTTATCCCGTTGCCACATTCGCCCAAGTAGCCTGGTATCCAATTGGGGGCGT---CAATGAA
CCGCACGTCCAAGAGCTCGGCAAGTGGGCAGTGGCGGAGCACGTCAAGCAGGCGCACGATGGGCTCAAGTTCATCAAGGT
GATGAGCGGTGAAAAGGCGCCCGATGCCGGTGTGAAATATCACCTCATCATCAAAGCATTCAACAGCAACAACAAACCTG
TTAGATACGAAGCGTTTTTGGTTGAGGAGATTAGGAGCAACACACGCAACCTCATCTCCTTTAGCCCCGTGAACTAAGTG
ATGACCAACTGGGTGGATAGTATTTTTGGATATAATAAACATGTACTAATGAGAATAAATAATTTTTGTAAGCGGTATGG
AAAAC-TATTTG-AA-TTGAGATAACAAGTTTTTGGCCTACAAATTTCAAAAGGTAGTTTGCTCCATCATTAAATTAAAA
AAAGGGCAACCTGGTGCATGTAGCTCCCGCTTGCGCAGGGTCCAGGGAAGGGTCCGACCACTTTGGGTCTCCATCATTAA
ATTGTCAACATAAAAA-GTTCCTGGGAAGAAAAACTGGTTGTCATGTTGCATCTCTACTTTTCTCGGCATTATACTGAAC
TCCCTGGCGTGCAATTTCTTGGTGCTATCAATCATGTACTATAGGCTATCGTGCACTTTGTTGCGCTGTTATTCACTCGT
GGGATTAATCTCTCTCGTAGATTATTGTAGTTCATTGTTTCATTTTGACTTTATCTGTGTTGGCTTAGTTTTTAACTATA
TTTTGGTGGTATTTTTTC-ATTCATATATTGTATTGGGATACCGTTGGAGATGGTATTTGTTTTGAAAGGAGAGTGGACT
TGTTCTAGCGTGGTT-------CCTTGCATGTTCCGGCTTTATTGTCAATCAATGGTAATTGTGTGAGCCCGTCGGG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr7D_5
----GAAAGGTAAAGGAAATAAAATATCAAACAAATCCAAAAAATTCTAAAAAGAATTACGCATCAAAGATGAAAGACTC
TTGTAAGTGCGTGCAAATTTTCACACTAAGACGGCATCCGAGGAGCTCGGTACAAAACAAACATAATCAGAGATCAATTT
TTTT--GCAGCTTTGGGCATTTTTTGAGCTTTTATATTGTTTTCTTTGTGCCAAGCTCCTCAGATGTCATATGAGCGAGA
AACTTTGCAACCACCTAGAAGAATCTCTCATCTTTCATGTGTAGTTTTCTTTGGCTTTTTTTAAACGGGTTATCTTTTTG
AATTACTTCACTTGGTGCAGATGTACCCGAGCTCCTAACATTACTATCCTTGTGATTCCTTTTTTT------ACCATGGA
TACATTATACACTAAGGAATGTTATTTTACCGCTTGTCATTCCGCACATGCATGTGAGTTTTCCACTGAATCGTACATTC
CAAGATCATAGCAATTATAGCATAGAATATAAATTTGTAATTATGAAT-ATAGAAATATAAATAATATAATATTATTGCC
TCTAGGTCATATTTCCAACAATCGCGTTGTCTTCATCGACCAACGCCATTTGTGGATTCTAGGTCGGTGCATAGTTGGCC
AATGTACACCGTTGGAATAGATCAATG-TCGTCTTATTTTGAAAAGTAACTTGGTCTAGGAATATACCAATA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr7D_5
----GAAAGGTAAAGGAAATAAAATATCAAACAAATCCAAAAAAATCTAAAAAAAT---CGCATCGAAGATGAAAGACTT
TTGTAAGTGCGTGCAAATTTTCACACTGAGACGG----------GCTCGGTACAAAACAAACATAATCAGAGATCAATTT
TTTTTTGCAGCTTTGGGCATTTTTTGAGCTTTTATATTGTTTTCTTTGTGCCAAGCTCCTCAGATGTCATGTGAGCGAGA
AACTTTGCAACCACCTAGAAGAATCTCTCACCTTTCATGTGTAGTTTTCTTTGGCTTTTTTTAAACGGGTTATCTTTTTG
AATTACTTCACTTGGTGCAGATGTACCCGAGCTCCTAACATTACTATCCTTGTGATTCCTTTTTTT------GCCATGGA
TACATTATACACT-AGGAATCTTATTTTACCGCTTGTCATTCCGCACGTGCATATGAGTTTTTCACTGAATCCTACATTC
CAAAATCATAGCAGCTATAGCATAGAATATAAATTTGTAATTATGAAT-ATAGAAATATAAATAATATAATATTATTGCC
TCTAGGTCATATTTCCAACAATCGTGTTGTCTTCATCGACCAACGCCATTTGTGGATTCTAGGTCGGTGTACGGTTGGCC
AATGTACACCATTGGAATAGATCGATG-TCGTCTTATTTTGAAAAGTAACTTGGTCTATGAATATACCAATAGAATCCAA
GCCTTGCAACAACAG----AAAATAATCCATCAATGATATCAAGTGAATTTCTTAATGACTACACTTCATTTTAGAAAGT
ACTTTAGTACAACAGTTTGGATATGCATCTAATTGATTAATACTACTGAATTGCTTATGTTGGATATGTATGCAATTAAT
ATCTACCTTGCAATGGCCATATATAGTTAGATGTCATGCACCTCATTCACCT--AACCAGCACAACAACAAGAA-CCTTG
ATTGATCCTGAAAGTGCGTTATATCGACTAGACGGGGTGTGAATAGGCGATTTTTATAAATTCTTCACTGAGGAATTTGT
GGGTGAGGAAATTCCTTAGCGAAGAACTACTTGCAGCGGAATAAGTACTCAAAAGTATGCATAGCAGAACACAAGCATAG
TCATCATGATGAAATAAAAACAAGCACAGAGTACAGAAAGCGTAAACACGGGATAACACAGGATGAAGACAAACAGACTG
AGGAAATTGAACTGAGAAAATTGAGAAAGTCTTCAGTCAAAGTCTTCAAATACAGATCTGAGCAATTGCACAACACAGGA
ATGAGGAAATGAATGAGTTGAGGAAATAGAACCAGTTGAGTTGGTGAAGACAATGATTTGGTAGACCAGTTCCAACTGCT
GTCTCAGTTGTACGTCTGGTTGGAGCGGCTACGTATTTAAACCTGAGGACACGCAGTCCCGGACACACAGTCCTCATCGT
ATTCTCCTTGAACTAAGGTCACACAGACCTCGTCCAATCACTCGTGGTAAGTCTTCAGGTGACTTCCAAACCTTCACAAA
CTCGGTCACTCGGCGATCCACAATTTCCTCTTGGATGCTCTAGACCATGACGCCTAACCGTCTGGAAGAAGCACAGTCTT
CAAAGGTAACAAGCGTCGGATCCACGCATGATCAATCTCTTCAGTGATGCTCAATCACTTTGGGTTTGTAGGTGTTTGGG
TTTGGGTTTTCCTCACTGATGATTTTCGCTCAAAGTCCTCGGAGGATGGGATGCTCTCAAATGACAAGTGTCAGTTTCTT
TCGGAGCAGCCAACCAGCTAGTGGTTGTAGGGGGCGGCTATTTATAGCCTAGGGAGCAGCCCGCATGATAAGACATAAAT
ACCCTACAATGATATGACCGTTAGGTGGGTAGATATTTTGGGACAGCTGGCACATAGCACAGCAACGGTCAGAAATTTGA
GGTTCAAATTCCTCAGGGCTATCATGTTCCTCACTGTGTAGGCAATCCGCACTGGCGAATTCCTAACTCCTCAGTCAGAA
CAAATTCCCCAGAGACCAGAAGAACTTCGTCTCTGTCACTGAAGAATATGACTGAATTGTAAGAGATTTCCAATGGCTTC
ACTCGAAGGGATTGGTAGGTGTAGGATTTTGAGTTGAGCATCACATGAAAAATTTTCCTTGGTATTTCCTCGACCCTCTT
TAATAGTACGGTGTTTCCTATGACTCAAGAAAGAGAAAATGAAACTACGAAAACAAAAGTCTTCACGCTTCATGTTCCTC
AAATGAATACCAAGTCTTCAAGGTCACACCAATTTCTTCACTTTCAAAGTCTTCAGAAAGTCTTAAAAAATCCAAAGTCT
TCAGTCGAAGAACTTCATTTTTAGGGGTCGACTTTCTCTGTAATTATCAAACTCCTCGTAGACTTATAGATTTGTGTACA
CTCACAAACGCATTAGTCCCTTAACCTATAAGTCTTCAATACACCAAAATCACTAAGGGACTTACAGATCCCGAAGCTGC
ATAAGCGCATCCATCAACCCAAAGTCGTACCACCACAAATCTGTCACC-ATGAGGACTTGCAGTCTCCCCATCATCATTG
CCGCCGCTGTTGCCGTGGCTTATCCCGTTGCCACGTCCGCCCAAGTAGCCTGGTATCCAATTGGGGGCGT---CAATGAA
CCGCACGTCCAGGAGCTCGGCAGGTGGGCAGTGGCGGAGCACGTCAAGCAGGCACACGATGGGCTCAAATTCATCAAGGT
GATCAGCGGTGAAAAGGCGCCTGCTGCCGGT-------------------------------------------------
---------------TTTTGGTTGAGGAGATTAGGAGCAACACGCGCACCCTCATCTCCTTTAGCCCCGTGAACTAAGTG
ATGACCAACTGGGTGGATAGTA-TTTTGGATGTAATAAACATGTACTAATGAGAATAAATAATTTTTGTAAGCAGTATGG
AAAAC-TATTTG-AA-TTGAGATAACAAGTTTTTGGCCTACAAATTTCAAAACGGTA-GTTT------------------
-------------------------------------------------------------------GCTCCATCATTAA
ATTGTCAACATAAAAAAGTTTCATGGAAGAAAAACTGGTTGTCATGTTGCATCTCGACTTTTCTCGGCATTATACTGAAC
TCCTTGGCGTGCAATTTCTTGGTGCTATCAATCATGTACTATAGGCTACCGCGCACTTCGTTGCGCCGTTCTTCACTCGT
GGGATTAATCTCTCTCGTAGATTATTGTAGTTGATTGTTTCATTTTGACTTTATATGTGTTGGCTTAGTTTTTAACTATA
TTTTGGTGGTATTTTTTC-ATTCGTATATTGTATCGGGCTACCGTTGGAGACGGTATTTGTTTTGAAAGGAGAGTGAACT
TGTTCTAGCGTGGTT-------CCTTACATGTTTCGGTTTTATTGTCAATCAATGGTGATTGTGTGAGCCCGTCGGG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr4D_566
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TTGTCTTAATCAACCAACAACA-TTGTGGATTCTAGGTTGGCGTGTAATCGGCC
ACTGTCCTCTTGTCGAATACGACCATTATCGTCTTATTTTGAAAAGTAATTTGGTATACGAATATACCTACAAAATCCAA
GCATTACAATAGCAG----AAAATAATTCATCAAAGTTATCATGTTAATTTATAAATGACAATTGTTTATTTTAGGAAGT
ACTGTAGTAGAACTATTTGGATATGCATCTAATTAATTGATACTACTAAATCACATATGGTGGATATGTATACAATT-AT
ATCTACCTTGCAATGGCTATATCTATTCAGATGTCACGCACCTCATTCACCT--AACCCCCACAACAACAAGAAACCTTG
ATT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GATCTCAAAACTAC
ATAAGTGCATACATCAACACAAAGTCGTACCATCACAAATCCGCCACC-ATGAGGACCTAGAGTATCCCCCTCATGATTG
TCACCATTGTTGTCATGTCTTATCCCGTTGCC-------------TAGCCTGGTATCCAATTGGGGACGTCGACAATGAA
CCACACGTCCAAGAGCTCGGCGGGTGGGCAGTGGCGGAGCACATCAAGAAGATGCATGACGGGCTCAAGTTCATCAAGGT
GATGAGCGATGAGGAGGCGCCTGATGCCGGTGTGAAAT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr7D_687
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GATAGAATCCAA
GCCTTGCAACAGCAG----AAAATAATCCATCAATGATATCATGTGAATTTCTTAATGACTACACTTCATTTTAGGAAGT
ACTTTAGTACAACAGTTTGGATATGCATCTAATTGATTAATACTACTAAATTGCTTATGTTGGATATGTATGCAATTAAT
ATCTTCCTTGCAATGGCCAT--ATATTTAGATGTCATGCACCTCATTCACCT--AACCAGCACAACAACAAG-AACCTTG
ATT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GATCCCGAAGCTGC
ATAAGCGCATCCATCAACCCAAAGTCGTACCACCACAAGTCTGTCACC-ATGAGGACTTGCAGTCTCCTCATCATCATTG
CCGCCGTTGTTGCCGTGGCTTATCCCGTTGCCACGTCCGCCCAAGTAGCCTGGTATCCAATTGGGGGCAT---CAATGAA
CCGCACGTCCAGGAGCTCGGTAGGTGGGCAGTGGCGGAGCACGTCAAGCAGGCGCACGATGGGCTCAAATTCATCAAGGT
GATCAGCGGTGAAAAGGCGCCGGATGCCGGTGTGAAATATCACCTCATCATCAAAGCATTCAACAGCAACAACAAACCTG
TTACATACGAAGCGTTTTTGGTTGAGGAGATTAGAAGCAACACACGCACCCTCATCTCCTTTAGCCCCGTGAACTAAGTG
ATGACCAACTGGGTGGATAGTA-TTTTGGATGTAATAAACATGTACTAATGAGAATAAATAATTTTTGTAAGCAGTATGG
AAAAC-T-TTTG-AA-TTGAGATAACAAGTTTTTGGCCTACAAATTCCAAAACGGTA-GTTT------------------
-------------------------------------------------------------------TCTCCATCATTAA
ATTGTCAACATAAAAAAGTTTCCCGGAAGAAAAACTGGTTT--ATGTTGCATCTTGACTTTTCTCGGCATTATACTGAAC
TCCTTGGCGTGCAATTTCTTGGTGCTATCAAGCATGTACTATAGGCTACCGTGCACTTCGTTGCGCCGTTCTTCA--TGT
GGGATTAATCTCTCTCGTAGATTATTGTAGTTGATTGTTTCATTTTGACTTTATATGTGTTGGCTTAGTTTTTA-CTATA
TTTTGGTGGTATTTTTTC-ATTCGTATATTGTATCGGGCTACCGTTGGAGACGGTATTTGTTTTGAAAGGAGAGTGAACT
TGTTCTAGCGTGGTT-------CCTTACATGTTTCGGTTTTATTGTCAATCAATGGTGATTGTGTGAGCCCGTCGGG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr3D_769
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TTTAGGAAGT
ACTTTAATATAATAATCTTGATATACATCTACTTGATTGATACTAATAAATGGCATATGAAAAAAA--TATGCAATTAAT
ATCAACCTTGCAATTGTCGTGCCTATTTAGATG-CCTGCACCTCATTCATCTTTAGCCAGCACCAGAACAAGCA-TCGAG
ATT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GGTCTCAAAGCTGC
ATAAGCGCATACATCAAGCCAAACCCGCACCACCTCAAAATTGTCAGCAATGAGGACCGGTAGCCTCCTCCTCATCATTT
TCGCCATTGTTGTCGTGGCTTACCCGTTTGCAACTTCCGCCGAGGAAGAGTGGTATCCTATTGGAGACCCCGACAATGAA
CCACGCGTCCAAGAGCTCGACGGGTGGGCAGTGGCGGAGCACGTCAAGCAGGCACACGACGGGCTCAAATTCATCAAGGT
GGTGAGCGGTGCGGAGGCAAATGCCGCCGGTGTGAAATATCGCCTCGACATCAAAGCATTGAACAACAACGGCCAACCTA
GTGCATACAGAGCGATTTTACTCGAGGAGGTCAGGGACAACAAGCGCACCCTCATCTCCTTCGGACCCGCGAACTAAGTG
GCAACCAACCAGGTTCATACTA-CTTCA-ATGTAATAAACATGTACCAATGAGAACAAATAATTTGTGTAAGTAGTGTGG
AAAACATAATTGAAT-TTTAAATAATAAGTCTTTGGCCTACAAA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr3A_769
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TTTAGGAAGT
ACTTTAATATAATAATCTGGATATACATCAACTTGATTGATACTAATAAATGGCATATAAAAAAAA--TATGCAATTAAT
ATCTACCTTGCAATGGTTGTGCCTATTTAGATG-CCTGCACCTCATTCATCTTTAGCCAGCACCACAACAAGCA-TCGAG
AGT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GGTCTCAAAGTTGC
ATAAGCGCATACATCAAGCTAAACCCGCACCACCTCAAAATTGTCAGCAATGAGGACCGGTAGCCTCCTCCTCATCATTT
TCGCCATTGTTGTCGTGGCTTACCCATTTGCAGCATCCGCCGAGGAAGAGTGGTATCCTATTGGAGACCCCGACAACGAA
CCACACGTCCAAGAGCTGGGCGGGTGGGCAGTGGCGGAGCACGTCAAGCAGGCACACGACAGGCTCAAATTCATCAAGGT
GGTGAGCGGTGCGGAGGCAAATGCCGCCGGTGTGAAATATCGCCTCGACATTAAAGCATTGAACAACAACGGCGAAGCCG
GTGCATACAAAGCGATTTTACTCGAGGAGGTCAGGGACAACGAGCGCACCCTCATCTCCTTCGGACCCGCGAACTAAGTG
GCAACCAACCAGGTTCATAGTA-CTTCA-ATGTAATAAACATGTACCAATGAGAACAAATAATTTGTGTAAGCAGTGTGG
AAAACATAATTG-AT-TTTAAATAATAAGTCTTTGGCTTACAAA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>SNPs
SSSS--------------------------------S--------SSSS----------S--------------S-----
--S--S------S------------------S-S------------SS-----------S---S----SS--S--S-S--
-------SSSSSS-S-----S------S----S--S-------------S--S-S----------SS-----S------S
-----S-------------------------S-------------------------S--------S-------S---S-
------------S-------------SS-----------SS----S-----------------------SS---------
-------------------------------SSS-S-----S--------------------------------------
-------------------S-------------S--------------S------------------S------------
------S--------------S---------S--------S---------------------------------------
-S--------------------------------------------------------------------------S---
----SSS-SS-SSSSSSSS----S----------------S------------------S--------------------
-------------------------------------S------------------------------------------
----S------------------------------------S--------------S--S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S---------S
------------SS-----------------------------------S---------------------S--------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
S------------S-S--------------S--------------------------S--------------------S-
-----------------------------------------------S--------------------------S-----
----S----------S--------------------S--------------------S----------------------
--------------------------------------------------------------------------------
-----------S------------S------------S-------S----------------------------------
--------S-----------------------------------------S-----S----S--SS--------------
----------------------------------------SS---------------------S--S-------------
-------SS---------S----S--------S----------S----------------S-S-----------------
---------------SSSSSSS-------------------SS-----SS---S-------------------S---SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_128
--------------------------------------------------------------------------------
----------------------------AGATGACATCCGAGGAGCCT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>reverse_3584
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TAAGTCTGACCCCGAGC
TCA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
