>input_sequence_83056
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------ATGAGGACCGGTAGCCTCCTCCTC
ATCATTTTCGCCATTGTTGTCGTGGCTTACCCATTTGCAGCATCCGCCGAGGAAGAGTGGTATCCTATTGGAGACCCCGA
CAACGAACCACACGTCCAAGAGCTGGGCGGGTGGGCAGTGGCGGAGCACGTCAAGCAGGCACACGACAGGCTCAAATTCA
TCAAGGTGGTGAGCGGTGCGGAGGCAAATGCCGCCGGTGTGAAATATCGCCTCGACATTAAAGCATTGAACAACAACGGC
GAAGCCGGTGCATACAAAGCGATTTTACTCGAGGAGGTCAGGGACAACGAGCGCACCCTCATCTCCTTCGGACCCGCGAA
CTAA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr3A_1_TraesCS3A01G384600
TAGAGTTTTTATCATTTATGTCATCAGTTGTGTCTCGCTACTCAGTTTTCCCACTAGCATTTTTAACTGATTAAAAATGC
CATCGCTCTGTTAGGCTCATGCTC-A-AAAGTACTACTATAAACCATTAATGTCAGCTCAAAAACCGTTTACCATGTTAT
-ATTGACCAAAATACCCATGGATCAACATGTCAGCTCTCCCTCTATCTCACTATGTTAAAGTATGGGTCCCACTCAA-TC
CCC-AACATCGTTCTTACTTTTCTCTAA-AAAATATTCACTTGCTTACTCCTAACAAGTAGGACCCACACTTATCATTGT
GAGATAGAGCGACCTGACATGTAGGTCTTGGGGTATTTTGGTCATATAACATGATCAATTGGTCTGACCTAACAGTAATG
GTGTCAAT--GCCATTTTTAGCGAATATTTAATGAAACAATGGCATTTTTG-AGGTATATAATGGCATTTTT-CAGCAAG
CATTTCATGAAACATTGATA-TTTTGAGCAATTATAACTTTTAATGGCAAAACTGAGTAGTGAGACACAACTAATGGCAT
GAATGACAAAACCCTGTCAATTAATCTATGATACTCCAGTGTTTAGCGCTAAATAGGTTTAGCACATTCCCTTAATCAAT
ATGCTATTACGAGTACCAACCAATTAATTACTATATCCTAGCTAATATCAACGTGCAATTATTATCTTGCAAAATATTAA
TCTACAATGCAATTATTTTATTGTCTAATATTATGTGCATTGCATGTACATGGTTACC-ATTTAGGAAGTACTTTAATAT
AATAATCTGGATATACATCAACTTGATTGATACTAATAAATGGCATATAAAAAAAA--TATGCAATTAATATCTACCTTG
CAATGGTTGTGCCTATTTAGATG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CCTGCACCTCATTCATCTTTAGCCAGCACCACAACAAGCATCGAGAGTGGTCTCA
AAGTTGCATAAGCGCATACATCAAGCTAAACCCGCACCACCTCAAAATTGTCAGCAATGAGGACCGGTAGCCTCCTCCTC
ATCATTTTCGCCATTGTTGTCGTGGCTTACCCATTTGCAGCATCCGCCGAGGAAGAGTGGTATCCTATTGGAGACCCCGA
CAACGAACCACACGTCCAAGAGCTGGGCGGGTGGGCAGTGGCGGAGCACGTCAAGCAGGCACACGACAGGCTCAAATTCA
TCAAGGTGGTGAGCGGTGCGGAGGCAAATGCCGCCGGTGTGAAATATCGCCTCGACATTAAAGCATTGAACAACAACGGC
GAAGCCGGTGCATACAAAGCGATTTTACTCGAGGAGGTCAGGGACAACGAGCGCACCCTCATCTCCTTCGGACCCGCGAA
CTAAGTGGCAACCAACCAGGTTCATAG--------------TA-CTTCA-ATGTAATAAACATGTACCAATGAGAACAAA
TAATTTGTGTAAGCAGTGTGGAAAACATAATTG-ATTTTAAATAATAAGTCTTTGGCTTA-------CAAAATGGGGAGT
ATGCTCCAACATTAAAAAAAATCCCAAGAAAAAAATGGGGGTCATGTTGCATCTCCACTTTTCTCCTGTATTATTATAAT
TCTAAGTAGCAAGCTCGCCGTTTTTGTTGCGCGCCATTTGTTGAGGCTGCCGAAATCACTAGAACTTTCTTGATACTATC
AACCGTGTATGTTTCCCACACACAAAAAATTGTGCATGTGCACTTTCCCATACTAGTCATTTTTTCAGCATG--TATTGT
CCATATATGTAATTTCATATGCAATGCAACTACACTCAGACAAGAGCAAACGGCCAATCCAAATTTTCTAATGAAGTCAA
ACAGCGTAAAGTTTCATCAAATTTATAGGAAGGACTATCAAGAACTACAGTACCCAATTAATATCATTCGATACATAACA
AAATATA-TTTTATACTATATTTATTTTGTATTGTACTACTTGTTAGTGGTTGTTCCTATAAACATGGTCAAACGATGCA
AC-TTTGACTTCAAACATAACTTATAGGCCTTCTTTTCAAAAACAAATGGAGTGTTGTAATTTGAGGAAAATTCATGATT
AATTTCAGTAAATACCCAAGCCTTTATTCCAGGCAAAGTTTTTGCCTTGAGATTCAGCCACTTGGATGAAAGTGACTCTT
GGTGAGTTTTGGGTTTGCCGCGTGGTATTATTTTGGTACACGGCGGTGTACAAACGCCTTGTGGATTCGGTGTTTTGATT
CAAATTTTTTGAACTAGCGTCATGTTTCTTTGGGTTGGTTTAGCAATTTTGATTGCATGTGGGGCAGGCAGGGGACGTGC
AGGCCGCCGCTGTCCTGTTGATCTGCTTGCATGGGCTCTGCCGTGCGGCAGGCTGCGTGCATCCTTCTGCGT
>chr3D_1
TAGAGTTTTTATCATTTATGTCATCAGTTGTATCTCACTACTCAGTTTTCCCACTAATATCTTTAACTGTTTAAAAATGC
--TCGCTCTGTTAGGCTCATGCTC-A-AAAGTACTACTATAAACCATTAATGTCAGCTCAAAACCCGTTTACCATGTTAT
-ATTGACCAAAATACTCATGGACCAACATGGCAGCTCTCCCTCTATCTCACTATGTTAAAGTGTGGGTCCCACTCAAATC
CCC-AACATCGTTCATATTTTTCTCGAA-AAATTATTCACTTGCTTACTCCTAACAAGTAGGACCCACACTTATCATTAT
GAGATAGAGCGACCTGACATGTAGGTCTTGGGGTATTTTGGTCATATAACATGATCAATTGGTCTGACCTAACAGTAATG
GTGTCAAT--GCCATTTTTAGCGAATATTTAATGGAACGATAGCATTTTTTGAGGTATATAATGGCA-TTTT-GAGCAAG
CATTTCATGAAACATTGGTA-TTTTGAGCAATTATAACTTCTAATGGCAAAACTGAATAGTGAGAGACAACTAATGGCAT
AAATGACAAAACCCTGTCAATTAATCTCTGTTACTCCAGTGTTTAGCGCTAAACAGGTTTAGCACCTTCCCTTAATCAAT
ATGCTATTACGAGTACCAACCAATTAATTACTATATCCTAACTAATATCAACGTGCAATTATTATCTTGCAAAATATTAA
TTTGCAATGCAACTACTTTATTGCCTAATATTATGTGCATTGCATGTACATGGTTACC-ATTTAGGAAGTACTTTAATAT
AATAATCTTGATATACATCTACTTGATTGATACTAATAAATGGCATATGAAAAAAA--TATGCAATTAATATCAACCTTG
CAATTGTCGTGCCTATTTAGATG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CCTGCACCTCATTCATCTTTAGCCAGCACCAGAACAAGCATCGAGATTGGTCTCA
AAGCTGCATAAGCGCATACATCAAGCCAAACCCGCACCACCTCAAAATTGTCAGCAATGAGGACCGGTAGCCTCCTCCTC
ATCATTTTCGCCATTGTTGTCGTGGCTTACCCGTTTGCAACTTCCGCCGAGGAAGAGTGGTATCCTATTGGAGACCCCGA
CAATGAACCACGCGTCCAAGAGCTCGACGGGTGGGCAGTGGCGGAGCACGTCAAGCAGGCACACGACGGGCTCAAATTCA
TCAAGGTGGTGAGCGGTGCGGAGGCAAATGCCGCCGGTGTGAAATATCGCCTCGACATCAAAGCATTGAACAACAACGGC
CAACCTAGTGCATACAGAGCGATTTTACTCGAGGAGGTCAGGGACAACAAGCGCACCCTCATCTCCTTCGGACCCGCGAA
CTAAGTGGCAACCAACCAGGTTCATAC--------------TA-CTTCA-ATGTAATAAACATGTACCAATGAGAACAAA
TAATTTGTGTAAGTAGTGTGGAAAACATAATTGAATTTTAAATAATAAGTCTTTGGCCTA-------CAAAATGGGGAGT
ATGCTCCAACATTAAAAAAATCCCAAGAAAAAAAATGGGGGTCATGTTGCATCTCCACTTTTCTCCGGTATTATTATAAG
TCTAAGTAGCAAGCTCGCCGTTTTTGTTGCGCGTCATTTGTTGAGGCTGCCGAAATCACTAGCACTTTCTTGATACTATC
AACCGTGTATGTTTCCCACATACAAAAAATTGTGCATGTGCACTTTCCCATACTAGTCATTTTTTCAGCATGTATATTGT
CCATATATGTAATTTCATATGCAATGCAACAACACTCAGACAAGAGCAAACGGCCAATCCAAATTTTCTAATGAAGTCAA
ACAGTGTAAAGTTTCATCAAATTTATAGGAAGGACTATCAAGAACTACAGTACCTAATTAATATCATTCGATACGTAATA
AAATATATTTTTATACTATATTTATTTTGTATTGTACTAGTTGTTAGTGGTTGTTCCTATAAACATGGTCAAACGATGCA
ACGTTTGACTTCAAACATAACTTATAGGCCTTCTTTTCAAAGACGAATGGAGTGTTGTAATTTTAGGAAAATTCATGATT
AATTTCAGTAAATA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr7B_1
TAGGGTTTTTATCATTTATGCCACTAGTTGTGTCCCACTACTCAGTTTTGCCACTAGGAGTTTCAACTGCTCAAAAATGA
CATCGTTGCATTAGGCGCATGCTC-A-AAAATGCCACTAGACACCATTACTGTCAGCTCAAAGCTCGTTTACCATGTTAT
-AT-GACCAAAATAACCATGGACCAAAATGTCAGCTCTCCCTCTATCTCACTATG--ATAGTGTGGGTCCCACTCGA-CC
CCC-AACAACGTTCTTATTTTCCTCT-A-AAATTATTTGCTTGCTTACTCATGACAAGTGGGGCCCACACTTATCATTGT
GAAATAGAGAGAGCTGACATGTGGGTCTAGGGGTATTTTGGTCATATAACACGGTCAACGGGTTCGACCTGACAGTAACG
GTGTCTAATGATATTTTTGAGCAAGCATCTAACGGAAGGATGGCATTTTTT-AGGTGTCTAATGGCATTTTT-GAGCAAG
CATCTCACAAAACGATGGCATTTTTTAGCAGTTGTAACTTCTACCGGCAAAACT---TAGTGGGACACAACTAGTGGCAT
AAATGATAAAAACCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr6D_4
---AGTTTTTATCATCTATGCCACTGGTTAAGTCTCACTACTCAGTTTTGCCACTAAGAATTTCAACAGCTCAAAAATGC
CATCGCTTCGTTAGGTGCATGCTA-A-AAAATGCCACTGGACACCTTTACTGTCAGCTCAAATCTCGTTTGCCATGTTAT
-AATGACCAGAATACCTATAGACCAACATGTCAGCTCTCCCTCTATCTCACTACAATAAAGTATGGGTACCACTTGA-T-
CCC-AACAGCGTTCTTATTTTCCTCT-A-AAATTATTCGCTTACTTACTCCTGACAAGTGGGGTCCACACTTATCATTGT
GAGATAGAGAGAGCTGACATGTGGGTACAGGGGAATTTTTGTCATATAACATGGTCAATGAGTTTGACCTGACAATAACG
ATGTCTAATGGCATTTTTGAGCAAACATCTAATGAAACGATGGCATTTTTG-AGATATCTAATGGCATTTTT-GAGCAAG
CATCTCACGGAACGATGGCATTTTTTAGCAGTTGTAATTTCTAATGGCAAAACTGAGCAGTGGGACACAACTAGTGGCAT
AAATGATAAAAACCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr6A_4
---AGTTTTTATCATTTATGCCACTGGTTAAGTCTCACTACTCAGTTTTGCCACTAAGAATTTCAACTGCTCAAAAATGC
CATCGCTTCATTAGGTGCATGCTA-AAAAAATGCCACTGGACACCTTTACTGTCAGCTCAAATCTCGTTTGCCATGTTAT
-AATGACCAGAATACCTATAGACCAACATGTCAGCTCTCCCTCTATCTCACTACAATAAAGTATGGGTCCCACTTGA-T-
CCC-AACAGCGTTCTTATTTCCCTCT-A-AAATTATTCGCTTACTTACTCCTGACAAGTGGGGTCCACACTTATCATTGT
GAGATAGAGAGAGCTGACATGTGGGTATAGGGGAATTTTTGTCATATAACATGGTCAACGAGTTTGACCTCACAATAACG
ATGTCTAATGGCATTTTTGAGCAAACATCTAATGAAATGATGGCATTTTTT-AGATATCTAATGGCA-TTTT-GAGCAAG
CATCTCACGTAACGATGGCACTTTTTAGCAGTTGTAATTTCTAATGGCAAAACAGAGTAGTGGGACACAACTAGTGGCAT
AAATGATAAAAACCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr2D_5
----GTTTTTATCATTTATGCCACTAGTTGTGTCCCACTACTCAGTTTTGCCACCAGGAGTTTCAACTGCTCAAACATGC
CATCGCTCCGTTAGGCGCATGCTC-A-AAAGTGCCACTAGACACCATTACTGTTAGCTCAAATCCCGTTTACCATGTTAT
-AT-GACCAAAATACCCATGAACTAACATGTCAGCTCTCCCTCTATCTCACTACGATAAAGTGTGGGTCCCACTCGA-T-
CCCCAACAGCATCCTTATTTTCCTCT-A-AAATTATTCGCTTGCTTACTCCTGACAAATGGGGCCCACACTTATCATTGT
GAGATAGAGAAT--TAACATGTGGGTCTAGGGGTATTCTGGTCATATAACATGGTTAACAGGTTTGACTTGACAATAACA
ATGTTTAATGGCATTTTTGAGCAAACATCAAATGGAACAATGTCATTTTTT-AGGTGTCTAATGGCA-TTTTCGAAGAAG
CATCTCATGGAACGATGGCATTTTTTAGCAGTTGTAACTTCTAATGGCAAAACTGAGTAGTGGGACACAACTAGTGGCAG
TAATGATAAAAACCCT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr1D_5
----GTTTTTATCATTTATGCCACTGGTTGTGTCCCACTACTCAGTTTTGCCACTAGGATTTTCAACTGCTCAAAAATGT
CATCGCTTCATTAGGGGCATGCTC-A-AAA-TGCCACTCGACACCATGATTGTCAGCTCAAATATCGTTTGCCATGTTAT
AAT-GACCAAAATACCTATAGACAAACATGTCAGCTCTCCCTCTATCTCACTACAATAAAGTGTGGATGCCACTTGA-T-
CCA-AGG-GCGTTCTTA-TTTTCTCT-A-AAATTATTTGCTTGCTTACTCCTAACAATTGGGGTCCACACTTATCATTGT
GAGATAGAGAGAGCTGACATGCGGGTATAGGGGTATGTTTGTCATATAACATGGTCAACGAGTTTGACCTGACAATAACG
ATGTCTAATGGCATTTCTGAGCAAACATCTAATGGAACGATGGCATTTTTG-AGATATCTAATTGCA-TTTTTGAGAAAA
CATCTCAGGGAACGATGGCATTTTTGAGCAGTTGTAATTTCTAATAGCAAAACTGAGTAGTGAGACACAAATAGTGGCAT
AAATGATAAAAACCCT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr1B_6
-----TTTTTATCATTTATGCCACTAGTTGTGTCCCACTACTCAGTTTTGCCACTAGGAATTTCAACTGCTCAAAAATGG
CATCGCTTCGTTAGGCGCATGCTG-A-AAAATGCCACTGGACATCATTACTGTCAGCTCAAATCTCGTTTGCCATGTTAT
-AATGACATAAATACCTATGGACCAACATGCCAGCCCTCCCTCTATCTCACTACAATAAAGTGTGGGTCCCACTTGA-T-
CCC-AACAGCATTCTTATTTTCCTGT-AGAG--TATTCGCTTGCTTACTACTAACAAGTGGGTCCCGCACTTATCATTGT
GAGATAGAGAGAACTAACATGTGGGCCTAGGGGTATTGTTGTCATATAATA-GGTTAAGGAATTTGA-CTGACAATAACG
ATGTCTAATGGCATTTTTGAGCAAACATCTAAAGGAACGATGACATTTTTT-AGATATGTAATGGCA-TTTTTGAGCAAG
CATCTCAAGGAATGATGGCATTTTTTAGCAGTTATAACTTTTAATGGCAAAACTGAGTAGTGGGACACAACTAATGGCAT
AAATGATAAAAACCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr5A_7
------TTTTATCAGTTATGCCACCGGTTGTGTCCCACTACTCAGTTTTGCCACTAGAAATTTCAACTGCTTAAAAATGC
CATCGCTTCATTAGACACATGCTCAA-AAA-TGCCACTAAACACCATTATTGTGATCTCAAATCTCTTTTGCCATGTTAT
-AATGACATAAATACCTATGGACCAACATGCCAGCTCTCCCTCTATCTCACTACAATAAAGTATGGGGCCCACATGA-T-
CCC-AACAGCGTTCTTATTTTCCTAT-AGAAATTATTTGCTTGGTTACTCCTGACAAGTGGGG-CCACACATATCATTGT
GAGATAGAGAGAACTGACATGTGGGTCTAGGCTTATTTTTGTCATAGAACTTGGTCAACAGGTTTGACGTAAAAATAACA
ATGTCTAATGGCATTTTTGAGCAAACATCTAACATAATGATGGCATTTTTG-AGATATCTAATGGCA-TTTTTGAGCAAG
CATCTCACGGACCGATGGCATTTTTGAGCAGTTGTAACTTCTAATGGCAAAACTGAGTAGTGAGACACAACTAGTGGCAT
AAATGATAAAACCCT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr3B_171
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------ACCCTTGGACCAACATGTCAACTCTCCCTCTATCTCACTATGTTAAAGTGTGGGTCCCACTCAA-TT
ACC-AACATCATTCTTATTTTTCTCT-ATAAATTATTCACTTGCTTACTCCTAACAAGTAGGGCCCACACTTATCATTGT
GAGATAGAGAGAACTGACATGTAGGTCTTGGGATATTTTGGTCATATAACATGATCAAATGGTTTGACCTGACAGTAACA
GTATC-AATGCCATTTTTTACCGAATATCTAATGGAACGATGACATTTTTTGAGGTATCTAATGCCA-TTTT-GAGCAAG
AATTTCATGGAACAATGGTA-TTTTGAGAAATTATAAATTGTAATAGCAAAACTGAGTAGTGAGACACAACTAATGGCAT
AAATGACAAAAACCTATCAATTTATCTATGTCACTCCAGTGTTTAGCGCTAAACAGGTTTAGCACCCTCCCTTAATCAAT
ATGCTATTATGAGTACCAACCAACTAATTACTATATCCTAGCTAATCTCAACATGCAATTATTATCTTGCAAAATATTAA
TTTGCAATGCAATTATTTTATTGCCTAATATTATGTGCATTGCATGTACACGGTTACT-ATTTAGGAAGTACTTTAATGT
AATAATCTGGATATACATCAACTTGATTGATACTAATAAATGGCATATGACAGATATGTATGCAATTAATATCTACCTTG
CAATGGCCGTGCCTATTTAGATG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CCTGCACCTCATTCATCTTCAGCGAGCACCACAACAAGCATCGAGATTGGTCTCA
AAGTTTCATAAGCGCATACGTCAAGCCAAACCCGCACCACCTCAAAATTGTCAGCAATGAGGACCGGTATCCTCATCATC
ATCATTTTTGCCACTATTGTCGTGGCTTACCCCTTTGCAACGTCTGCCGAGGAAGAGTGGTATCCTATAGGGGACCCCGA
CAATGAACCACATGTCCAGGAGCTTGGTGGCTGGGCAGTGGCGGAGCACGTCAAACAGGCACACGACGGGCTCAAATTCA
TCAACGTGGTGAGCGGTGCGGAGGCAAATGCCGCTGGTGTGAAATATCGCCTCGACATCAAAGCATTGAAGAACAACGGC
CAACCCGGTGCATACAGAGCGATTTTACTCGAGGAGGTCAGGGACAACGAGCGCACCCTCATCTCCTTCGAACCCACGAA
CTAAGTGGCAACCAACTAGGTTCATAG--------------TA-CTTT-GATGTAATAAACATGTACCAATGAGAACAAA
TAATTTGTGTAAGCGGTGTGGAAAACATAATTGAATTTTATATAATAAGTGTTTGGCCTA-------CAAAATGGGGAGT
ACGCTCCAACATTAAAAAAATCCCAAGAAAAAAA--GGTGGTCATGTTGCATCTCCAATTTTCTCCGGTATTATTATAAT
TCTAAGTAGCAAGCTCGCCATTTTTGTTGCGCGTTATTTGACGAGGCTGCCGAGATCACTAGCACTTTCTTGATACTATC
AATCGTGCATGTTCCCCACACAC-AAAAATTGTGCATGTGCACTTTCCCGTACTAGTCATTTTTTAATAATATATATTTT
CCTTATATGTAATTG-ATATGCAATGCAACTACACTCAGACAAGAGCAAACAGCCAATCCAAATTTTCTAATGAAATCAA
ACAGTGTAAAGTTTCATCAAATTTATACGAAGGACTATCAAGAACTACAATACCCAATTAATTTCATTCGATACATAATA
AAATATATTTTTATACTATATTTATTATGTGTTA---TAGTTGTTAGTTGTTGTTTCTATAAACATGGTCAAACGATGCA
ACGTTTGACTTCAAACATAACTTATAGGGTTTCTTTTCAAAGACAAATGGAGTGTTGTAATTTTAGGAAAAGTAAAGATT
AATTTCAGTAAAT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr5D_588
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------GTGTTTAGCGATAAACTTGTTCAACACCCTCGCTTAATTAAT
ATGATATGATAAGCACCAACTGATAAT----TATGTCCTATCAAATATCAACGTGCAATTAATATTTTATCAAATACTAA
TTTCCAATGTAATTAATATATTGTCTAACAGTAACATGCATTGATGTACACGATTACTAACTTTAGAAGTATTTTGATAG
AACAATTTTACAC-------ACTTGATTGATACTAATAAATGACACATGGCAGATATGTATGCAATTAATATCTACCTTG
CAATGGTCGTGCCTATTTAGATGCGTGCAACTAGTCCTGGCCATGGGAAGCCCGGCCCGGCCCGAAAAAGCCCGACCCGG
CCCGGCCCGACGCTGCTCCCGGGCCGGGCTCGGGCCTAGATTTTCAGCCCGAAGGCCGGCCCGGGCCCGGGCCCGTCATT
TTTGCAATTTCCTGAAGAGGCCCGGGCCGAGGCCCGAGGCCCATTGGGCTTTTATGTGTTTGGGCCGGGCTCGGGCCTGA
AAACTAGGCCCGATGGCGGGCCAGGCTTGGGCCTGGGTTTTTTTGACTCGGGCTTGGCTAGGCCCGGCCCGAAGCCCGGC
CCGGCCCGAGTTTTGGCCAGGTATACGTGCAACTCATCCATCTTCAACCATCACAACTACAAGCATTGTGATTGATCTCA
AAGCTGCATAAGCGCATATGTCAAGCGAAAGCCACACCACCACAAAACCGTCAACAATGAGGACTTGCAGCCTCCTTCTC
ATCATTGTCGCCGTTGTTGTCGTGGCTTACCCCTTCAGAACGTCCGCCGAGGAAGAGTGGTATCCGATTGGAGACCCTGA
CAATGAACCACACGTCCAAGAGCTCGGTGGGTGGGCAATGGCGGAGCACATCAAGCAGGCGCACGATGGGATCAAGTTCG
TCAAGGTGGTGAGCGGCGAGGTGGCAAATGTCGCTGGCCTGAAATATCGCCTCAACATCAAAGCATTGAACAAGAACGGA
CAACCTGGTGCATACAAAGCGATTTTACTCGAGGAGGTCAGGGAGAACGAGCACACCCTCATCTCCTTCGGACCCGCGAA
CTAAGAGGTGACCAACTGGGTGGATTTTACTTCAATGGATTTA-TCTTGAATCTAATAAACATGTACCAATGAAAAATAA
TAATTTGTATAAGTAGTTTGAAAAA-ATATTTGAATTAGAAATAATAAGTCTTTGGTCTAAAAATTTCAAAATGGGGAGT
TTGCTCCAACATTAAA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr7B_769
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TTTAGGAAGTACTTTAGTAC
AACAATTTGGATATGCATCTAATTGATAGATACTACTGAATTGCTTATGGTGGATATGTATACAATTAATATCTGCCTTG
CAATGGCCATATATATTTAGATGT--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CATGCACATCATTCACCT--AATCATCACAACAACAAGAACCTTGATTGATCCCA
AAGCTGCATAAGCGCATCCATCAACCCAAAGTCGTACCATCACAAATCTGTC-ACCATGAGGACCTGCAGTCTCCTGCTC
ATCATTATCGCCGTTGTTGATGTGGCTTATCCCGTTGCCACGTCCGCCCAAGTAGCATGGTATCCAATTGGGGACGTCAA
CAATGAACCGCACGTCCAAAAGCTCGGCGGGTGGGCAGTGGCGGAGCACGTCAAGCAGGTGCACGATGGGCTCAAGTTCA
TCAAGGTGATGAGCGGTGAAAAGGCACCTGATGCCGGTGTGAAATATCACCTCATCATCAAAGCATTCAACAGCAACGAC
AAACCTGCTAGATACGAAGCATATTTGGTTGAGGAGGCTAGGAGCAACACGCGCACCCTCATCTTCTTTAGCCCCGTGAA
CTAAGCGATGACCAACTGGGTGGATAG--------------TA-TTTTGGATGTAATAAACATGTACTGATGAGAATAAA
TAATTTTTGTAAGCAATATGGAAAA-ATATTTGAATTTGAGATAACAAGTTTTTGGTCTA-------CAAA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr7D_769
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TTTAGGAAGTACTTTAGTAC
AACAGTTTGGATATGCATCTAATTGATTAATACTACTAAATTGCTTATGTTGGATATGTATGCAATTAATATCTTCCTTG
CAATGGCCAT--ATATTTAGATGT--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CATGCACCTCATTCACCT--AACCAGCACAACAACAAGAACCTTGATTGATCCCG
AAGCTGCATAAGCGCATCCATCAACCCAAAGTCGTACCACCACAAGTCTGTC-ACCATGAGGACTTGCAGTCTCCTCATC
ATCATTGCCGCCGTTGTTGCCGTGGCTTATCCCGTTGCCACGTCCGCCCAAGTAGCCTGGTATCCAATTGGGGG---CAT
CAATGAACCGCACGTCCAGGAGCTCGGTAGGTGGGCAGTGGCGGAGCACGTCAAGCAGGCGCACGATGGGCTCAAATTCA
TCAAGGTGATCAGCGGTGAAAAGGCGCCGGATGCCGGTGTGAAATATCACCTCATCATCAAAGCATTCAACAGCAACAAC
AAACCTGTTACATACGAAGCGTTTTTGGTTGAGGAGATTAGAAGCAACACACGCACCCTCATCTCCTTTAGCCCCGTGAA
CTAAGTGATGACCAACTGGGTGGATAG--------------TA-TTTTGGATGTAATAAACATGTACTAATGAGAATAAA
TAATTTTTGTAAGCAGTATGGAAAACT---TTTGAATTGAGATAACAAGTTTTTGGCCTA-------CAAA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr7A_769
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TTTAGGAAGTACTTTAGTAC
AACAATTTGGATATGCATCTAATTGATTGATACTACTGAATTGCTTGTGGTGGATATGTATGCAATTAATATCTACCTTG
CAATGGCCATATATATTTAGATGT--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CATGCACCTCATTCACCT--AACCAGCACAACAACAAGAAACTTGATTGATCCCC
AAGCTACATAAGCGCATCCATCAACCCAAAGTCGTACCACCATAAATCTGTC-ACCATGAGGACTTGCAGTCTCCTTCTC
CTCATTGCCGCCACTGTTGCAGTGGCTTATCCCGTTGCCACATTCGCCCAAGTAGCCTGGTATCCAATTGGGGG---CGT
CAATGAACCGCACGTCCAAGAGCTCGGCAAGTGGGCAGTGGCGGAGCACGTCAAGCAGGCGCACGATGGGCTCAAGTTCA
TCAAGGTGATGAGCGGTGAAAAGGCGCCCGATGCCGGTGTGAAATATCACCTCATCATCAAAGCATTCAACAGCAACAAC
AAACCTGTTAGATACGAAGCGTTTTTGGTTGAGGAGATTAGGAGCAACACACGCAACCTCATCTCCTTTAGCCCCGTGAA
CTAAGTGATGACCAACTGGGTGGATAG--------------TATTTTTGGATATAATAAACATGTACTAATGAGAATAAA
TAATTTTTGTAAGCGGTATGGAAAACT--ATTTGAATTGAGATAACAAGTTTTTGGCCTA-------CAAA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>SNPs
------------------------------------S--------------------S-----------S----------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
-----------------S--------------S-----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
-----------------S--------------------------------------------------------------
S-----------------------------S----------------------S-----------S--------------
--------------------------------------------------------------------------------
-S-S----------------------------------------------------------------------------
------------------------------------------------S-------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------S-----------------------------------------------------
--------------------------------S------S----------------------------------------
---S--------------------S------------------------------------------S------------
----------------------------------------------------------S---------------------
S--S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------SS--S-SS--------------------------------------S-------------
---------------------------------S----------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S-------------------------------------------------------------------------S-
---------------------------------------S----------------------------------------
-----------------------------------------S---------------------S----------------
--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1272
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CACCACAACAAGCATCGAGAG--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_2531
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CAAACGCCTTGTGGATTCGG----------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
