>input_sequence_82974
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-------ATGGTTATCCCTGCACCAGCTAGGGCGCCTGCGATCACCAAGTTCCTCAAGCCCTATGTTCTGAAGATGCACT
TCACAAACAACTTTGTGACGGCCCAGGTCATCCACACCCCATCGG-CGACCATCGCATGCGCAGCGAGCTCACAGGAGAA
GATCCTGAGGCCAAGCATGGAGTCGACGCGGGACGTGGGCGTGGCTGCGGCGGCCAAGATCGGGAAGCTGCTCGGCGAGC
GCCTGCTGTTCAGGGGCATCCCCGCGGTGTCTGTCTCCATGTCGAGAGACCAGACGTACCACGGCAAGGTCAAGGCCGTC
ATCGATTCTCTCACAGCCGCCGGCGTGAAGCTGTTGTGA-----------------------------------------
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>chr3B_1_TraesCS3B01G281900
AGAGCTCCATATCCAGGGTTTTCCTAGTTCAGTCTGGAATTTAGCCCTGGGCATATATAGCAGTGCAATATGTCCTAGCT
TTG--------CCTTTTGGTATTGAATATCCTGGTGGAAGTTTT-GTAT-TTCATTGATTTCTGTAAAAGC--AAAATAC
TTCTTGATTAAAGCAATTTCCAACAG--TGGCTACACCCAACTTTATTTGCT-----GCGGAAGAAGGGAATGGTGGCAT
TCAAAGGACAACATGTCTACCTGATACAATCTTCCTAAAGTAAAATTTCCATTTCCTGCTTGTGGTATCTTTAGGAAGTT
CTGCAAGTCTCAAATGAGAAAACATCCATGCTGGATTTGCTTTGATGTTCCTTCCAAAGATGTTTTTCCTGATTAATAAC
--TCCTTTATGTCCATATTTAGTAATATCGTTTTCAGATTTTCTCCTCAGAGTTC-AGTCCTTGGAGTATGTCAACTTGT
TTAAATGGTGCTGCGGCTAGTCTTGAATAAAAGCTTTAGTAAA---AAAAGGCTGAGAGTGGGACACTGGGACCAAC-CA
ACTAGTCTCTTATAGACTCTTTAACAATGTT--------AT--GCTGTGTCTGTATTACTACGTATGTGCTGACTAAAAA
TTCTTATGGACACTGGGACACAGTAACTTTCATGCTGCATACAAAAAATTCTTCAGTTTCAGCAAT-ACGTTTTGAATTG
ATCACTATTTACTGGATCACTTTGTCACGTTCTCAACTGCTGA-ATTGTCACTGCAAGAATAATGAACTATGATGATCTA
AACTGTAAACATGCTTTCCTTCGATTCAACTAACTATAAGCATCAAACTTGGATGCCCTTTGTATGATACATTATAAATT
TATATGCAATCCTGGAGTTAGAATCTGAAACATATACCGC------ATTTTTTGTTGTGTACTAACAATAACCATTTCCG
CAG--TTTTCTGAAACATTGGATGTA-TTTTTGGCTAACTCTCTTTTCCTATTTCCTGGCTTACACAGATCAGCTTAACT
AGCCGATATGGTTATCCCTGCACCAGCTAGGGCGCCTGCGATCACCAAGTTCCTCAAGCCCTATGTTCTGAAGATGCACT
TCACAAACAACTTTGTGACGGCCCAGGTCATCCACACCCCATCGG-CGACCATCGCATGCGCAGCGAGCTCACAGGAGAA
GATCCTGAGGCCAAGCATGGAGTCGACGCGGGACGTGGGCGTGGCTGCGGCGGCCAAGATCGGGAAGCTGCTCGGCGAGC
GCCTGCTGTTCAGGGGCATCCCCGCGGTGTCTGTCTCCATGTCGAGAGACCAGACGTACCACGGCAAGGTCAAGGCCGTC
ATCGATTCTCTCACAGCCGCCGGCGTGAAGCTGTTGTGAACGGCGGTAGCCGATCATCAGTAGCTGATTTCCGCCGGCTG
TTTAGTCCT-------------------TGAAGTGAAGTGCAGATAAATAGTGCCTTCAGGCTTATGATGT---------
------------------------------TCGAACCTGTAACTGTCCCAGGCA-----TCACAATACAGATCAACATGT
TTCTGTTCAGAACACGGGGTTTTCCGACACGTGTCACAGGAATGAAATTGCATCTTTTGGAACACCTGCGTTGGGAATAA
TACTGTTACTTGGGAATCACGTATTAACGTCGTTGGATTCCAAGTCTT-GAGACTTTTCAGGTCA----AGTCTCCCATG
CCCAATATAGTATGAGACCCTGAAACTTGACCACCACGGAGTAACATAAGGAGTACAGTCAGCTAGCACTCACAAGGAAA
GATATACGTATTAAAGAAGGGAAAAG-CAGCGGCCAGTCCAAGAAACGTGAAACTTCCTTTTATCTAATGGTGCATCAGC
TCACACCTGCCGTGCCCCCTATATAAACGGGGTCACGGCCGCCGCGGAGGAAGTCAAAGCGGAAGGATCACCGGCGGTTT
GATCGAGTTCATCTTCATCCTACAGGTGAATCCAACAAGTTCGAGTGAGTGGTGCTCCTGTTCTTCTCTTGGACGGTGTT
CTTGCTCTGCTTTTGGCCATGCTTGTTTGTCATTTGGTGTTGATGCAGCAGCTGGAGACAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGGGGAGGCAGATGGAGCAGTTGATGGAACAGGAAGGGGACAACATGGTATTTCAATCAGCAT
CTGCACTTGTCCTTTTTCTTGTTT------------CTAATCTCGATTCATTGGTTCGGATGGCAGTAACCCTCGAAACT
CGTCTCTCAGG---------------CCACTTCGGTTGTCTTATGATCTTAG----TCCTCCGAATTTTCTCTTTTGCTT
GTTGGTTTAGTTGTGCCGC--------------------ATCCCCAAATCTTTTAGCTTGGTTGGTCACAAATGGTGTTT
AT---CTTCTTATAGGATCTAGCTGGGGATGGCATCCTGCCA
>chr4D_9
ATC--------TCAAGGGGTTTCCAAGTTCAGTCTGTAATTCAACCCTGG----ATATGGCAGCACAATATGTCTTAGCT
TTGAATGAGGGCCTTTTAGTATTTAATATATTGGCGGAATTTTTTGTATCTTTACTGATTTCTGTAGGAGC--AAAATAC
TTATTGATTTAAGCAATTTCCAACACTTTGGTCACTCCCAACTATATATACC-----ACGGAAGAAAAGAATGGTGACAT
TCAAAGGACAACATGCCTACCTGATACAGTCTTCCTAAAGTAAAATTTTCATTTCCTGCTTGTGGTGTCGTTAGGGAGTT
CTGCAAGTCTCAAATGAGAAAACATCCATGCTGGATTTGTTTTGATGTTCCTTC-AAAAATGTTTGCCCAGATTAATAAC
--TCCCTTATGTCCATATTTAGTAGTATCATTTTCAGATTTTCTCCTCAGAGTTTG-GTCCTTGGAGTGTGTTAACTTGC
TTAAATGGTT-TGCGGTTAATCTTGATTAAACGCT---TTAGGAAGAAAAGGCTGAAAGTGGGACACTGGGACCAAC-CA
ACTT-TCTGTTATGGACTCTTACTGAATGTC--------AT--ACTGTGTGCTAACATAT--------------------
--------------------CAGTAACTTTCATGCTGCATACTAAAA-TTCTTAAGTTTCAG----------TTGAATTG
ATTACTATTTACTGGATCACTTTGTCACTTTCTCAACTGCTGAAATTGTTACTGCAAGAATAATGAATTATGATGATGTA
AAACTGTAAAATTC-TTCCCTGGATTCAACTGATCATAACCATCGAACTTGGATGACCTTTCTATGATACATTATACATG
TGTACGCAATCTTGGATTTAGAATCTGACACATATAGAGTATCTTT-TTTGTTGTTGTGTACCCACGATAACCATT--CG
CAG--TTTTCTGAAACATTGAATGTG-TTCTTGGCTAACTCCTTTTTCCTATTTCCTGGCTTACGCAGGTCAGCTTTACT
ACCCGATATGGTTATCCCTGCACCAGCTAGGGCGCCTGCAATCACCAAGTTCCTAAAGCCCTATGTTCTGAAGATGCACT
TCACAAACAACTTTGTGACGGCCCAGGTCATCCACACCCCATCGG-CGACCATCGCCTGCGCAGCGAGCTCTCAGGAGAA
GATCCTGAGGCCAAGCATGGAGTCGACGCGGGA------CGTGGCTGCGGCGGCCAAGATCGGGAAGCTGCTCGGCGAGC
GCCTGCTGTTCAGGGGCATCCCCGCTGTGTCCGTCTCCATGTCGAGAGACCAGACGTACCATGGCAAGGTCAAGGCCATC
ATCGATTCTCTCATGGCCGCCGGCGTGAAGCTGCTGTGAACGGTGGTAGCTGATCATCAGTAGCCGATTTCCACCTGGTG
TTTAGTCCTGACATATGGCAGTTGTTCTTGAAGTGAAGTGCAGATAAATAGTGCCTTCAGGCTTATGATGTTTTTCAGTT
TAG--CTTCCCCGTGCTCGATTTCGACTTCTTGAACCTGTAACTG-CCCAGGCA-----TCACAATACAGATCAACATGT
TTCTGTTCAGAACACGGGGTTTTCCGACACGTGTCGCGGGAAGGAAATTGCATCTTTTGAAACACCTGCGTTGGGAAT-A
TACTGTTACTTGAGAATCACGTT--------GTTGGATTCCAAGTTTT-GAGACTTTTCAGGTCA----AGTCTCCCATG
CCCAATATAGTATGAGACCCTGAAACTTGACTACCACGGAACAACATAAGGAGTACAGTCAGCTAGCACTCACAAGGAAA
GATAA----ATTAAAGAAGGGAAAAG-CAGCGGCCAGTCCAAGAAACGTCAAACTTCCTTTTGTCTAATGGTGCATCAGC
TCACACCTGCCGTGGCCCCTATATAAACGT-----CGGCCGCCGCGGAGGAAGTCAAAGAGGAAGGATCACCAGCGGTTC
GACCGAGTTCATCTTCATCCTACAGGTGAATCCAACAAGTTCGAGTGAGTGGTGCTCCTGTTCTTCTCTTGGATGGTGTT
CTTGCTCTGCTTTTGGACCTGCCTGTTTCTCATTTTGTGTTCATGCAGCAGCTGGAGACAGATAGAGAGAG---------
-----------------------GGGAGTCGGAGCGGTTGATGGAACAGGAAGGGGACAACATGGTATCTCGATCAGCAT
CTGTACTTCTCCTTTTTCTTGTTTATTTAGGTGTTTCTAATCTCGATTCGTCGGTTCGGATGGCAGTAACCCTCGAAACT
CGTCTCTCAGTCCTTGCTAGGAAATTCCAGCTTGGTTGTCTTATAATGATAG----TCCTCTGAATTTTCTCTTTTGGTT
GTTGGTTTAGTTGTGCCGC--------------------AGCCCCAAATCTTTTAGCTTGGTAGGTCACAACCGGTGTTT
AT---CTTCTTATAGGATATAGCTGGGGATGGCATCCTGCCA
>chr4A_12
-----------TCCTGGGGTTTCCAAGTTCAGTCTGTAATTCAACCCTGG----ATATGGCACCACAATATGTCTTAGCT
TTGAATGAGGGCCTTTTGGTATTCAATATATTGGTGGAATTTTTTGTATCTTTACTGATTTCTGTAGAAGC--AAAATAC
TTATTGATTAAAGCGATTTCCAACACTTTGACTACTCCCAACTTTATATGCCATGGAACGGAAGAAAAGGATGGTGGCAT
TCAAAGGACAACATGCCTACCTGATACAATCTTCCTAAAGTAAAATTTTCATTTCCTGCTTGTGGTATTGTTAGGGAGTT
CTGCAAGTCTCAAATGAGAAAACATCCATGCTGGATTTGTTTTGATGTTCCTTC-AAAAATGTTTGCCCGGATTAGTAAC
--TCCTTTATGTCCATATTTAGTAGTATCATTTTCAGATTTTCTCCTCAGTA--TG-GTCCTTGGAGTATGTCAACTTGC
TTAAATGGTT-TGCGGTTAGTCTTGATTAAACGCT---TTAGGAAGAAAAGGCTGAAAGTGGGACACTGGGACCAAC-CA
ACTT-TCTGTTATGGACTCTTACCGAATGTTATACACTTAT--ACTGTGTGCTGACATAT--------------------
--------------------CAGTAACCTTCAGGCTGCGTACTAAAAATTCTTCAGTTTCAGCCATAACGTTTTGAATTG
ATTACTATTTACTGGATCACTTTGTCACTTTCTCAACTGCTGAAATTGTTACTTCAAGAATAATGAACTATGATGATGTG
AACTGT-AACATGCTTTCCCTGGATTCAACTGATCATAACCATCGAACTTGGATGCCCTTTTTATGATACATTATACATG
TGTACGCATTCTTGGATTTAGAATCTGAAACATATGGAGTACC----TTTTTTGCTGTGTACTCGCTATAACCATT--CA
CAA--TTTTCTGAAACATTGCATGTG-TTCTTGCCTAACTCCCTTTTCCTATTTTCTGGCTTATGCAGATCAGCTTAACT
AACTGACATGGTTATCCCTGCACCAGCTAGGGCGCCTGCAATCACCAAGTTCCTGAAGCCCTATGTTCTGAAGATGCACT
TCACAAACAACTTTGTGACGGCCCAGGTCATCCACACCCCATCGG-CGACCATCGCATGCGCAGCGAGCTCACAGGAGAA
GATCCTGAGGCCAAGCATGGAGTCGACGCGGGA------TGTGGCTGCGGCGGCCAAGATCGGGAAGCTGCTTGGCGAGC
GCCTGCTGTTCAGGGGCATCCCCGCGGTGTCCGTCTCCATGTCGAGAGACCAGACGTACCACGGCAAGGTCAAGGCCGTC
ATCGATTCTCTCACGGCCACCGGCGTGAAGCTGCTGTGAACGGTGGTAGCCGATCATCAGTAGCTGATTTCCACCGGCTG
TTTAGTCCTGACATATGGCAGTTGTTCTTGAAGTGAAGTGCAGATAAATAGTGCCTTCAGGCTTATGATGTTTTCAGTTT
AGCTTCCCCGTG----TCGATTTCGACTTCTCGAACCTGTAACTGTCCCAGGCA-----ACACAATACAGATCGACATGT
T---------------------------------------------------ACTTTTGAAACACCTGCGCTGGGAATAA
TACTGTTACTTGGGAATCACGTT--------GTTGGATTCCAAGTCTT-GAGACTTTTCAGGTCA----AGTCTCCCATG
CCAAATATAGTATGAGACCCTGAAACTTGGCTACCACGGAATAACATAAGAAGTACAGTCAGCTCGCACTCACAAGGAAA
G---------TTAAAGAAAAGAAAAGGCAGGGGCCAGTCCAAGAAACGTCAAACTTCCTTTTGTCTAATGGTGCATCAGC
TCACACCTGCCGTGCCCCCTATATAAATGGGGTC-------CCGCGGAGGAAGTCAAAGAGGAAGGATCAACAGCGGTTT
GGCCAAGTTCATCTTCATCGTACAGGTGAATCCAACAACTTCGAGTGAGTGGTGCTCCTGTTCTTCTCTTGGATGGTGTT
CTTGCTCTGCTTTTGGGCATGCCTGTTTCTCATTTGGTTTTGATGATGCAGCTGGAGACAGAGAGAGAGAG---------
---------------AGAGGGGAGGCAGATGGAGCAGTTGATGGAACAGGAAGGGGATAACATGGTATTTCAAGCAGAAT
CTGCACTTCTCCCTTTTCTTGTTTGTTTAGGTGTTTCTAGTCTCGATTCATCAGTTCGGATGGCAGTGACCCTCGAAACT
CGTCTCTCAGTCTTTACTAGGAAATTCCAGTTTGGTTGTCTTGTGATCTTTTTTACTCCTCTGAATTTTCTCTTTTGCCT
GTTGGTTTTGTTGTACTGCATGCGCTTAGC------------CCCTAATCTTTCAGCTTGGTTAGTCATGACTGGTGTTT
AT---CTTCT--TAGGGTCTAGCTGGGGTGGGCATGATGCCA
>chr4B_15
--------------AGGGTTTTCCTAGTTCAGTCTGGAATTTAGCCCTGGGCATATATAGCAGTGCAATATGTCCTAGCT
TTG--------CCTTTTGGTATTGAATATCCTAGCGGAAGTTTT-GTATCTTCATTGATTTCTATAGAAGC--AAAATAC
TTCTTGATTAAAGCAATTTCCAACAG--TGGCTACACCCAACTTTATTTGCT-----GCGGAAGAAGAGAATGGTGGCAT
TCAAAGGACAACATGTCTACCTGATACAATCTTCCTAAAGTAAAATTTTCATTTCCTGCTTGTGGTATCGTTAGGAAGTT
CTGCAAGTCTCAAATGAGAAAACATCCATGCTGGATTTGCTTTGATGTTCCTTCCAAAGATGTTTTTCCTGATTAATAAC
--TCCTTTATGTCCATATTTAGTAATATCGTTTTCAGATTTTCTCCTCAGAGTTC-AGTCCTTGGAGTATGTCAACTTGT
TTAAATGGTTCTGCGGCTAGTCTTGAATAAAAGCTTTAGGGAA---AAAAGGCTGAGAGTGGGACACTGGGACCAAC-CA
ACTAGTCTCTTATGGACTCTTTAACAATGTT--------AT--GCTGTGTCTGTA-TACTATGTATGTGCTGACTAAAAA
TTCTTATGGACACTGGGACACAGTAACTTTCATGCTGCATACTAAAAATTCTTCAGTTTCAGCAAT-ACGTTTTGAATTG
ATCACTATTTACAGGATCACTTTGTCACGTTCTCAACTGCTGAAATTGTCACTGCAAGAATGATGAACTATGATGATCTA
AACTATAAACATGCTTTCCTTCGATTCAACTGACGATAAGCATCAAACTTGGATGCCCTTTGTATGATACATTATAAATT
TGTATGCAATCCTGGAGTTAGAATCTGAAACATATACC--ACC----TTTTTTGTTGTGTACTAACAATAACCATTTCCG
CAG--TTTTCTGAAACATTGGATGTATTTTTTGGCTAACTCTCTTTTCCTATTTCCTGGCTTATGCGGATCAGCTTAACT
AGCCGACATGGTTATCCCTGCACCAGCTAGGGCGCCTGCGATCACCAAGTTCCTCAAGCCCTATGTTCTGAAGATGCACT
TCACAAACAACTTTGTGACG------------------------------------------------------------
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>chr4B_15
--------------AGGGGTTTCCATGTTCAGTCTGTAATTCAACCCTGG----ATATGGCAGCAGAATATGTCTTAGCT
TTGAATGAGGGCCTTATGGTATTTAATATATTGGTGGAATTTTTTGTTT-TTTACTGATTTCTGTAGAAGCAAAAAATAC
TTATTGATTAAAGCAATTTCCAACACTTTGGCCACTCCCAACTTTATATGCC-----ACGGAAGAAAAGAATGGTGGCAT
TCAAAGGACAACATGCCTACCTGATACAATCTTCCTAAAGTAAAATTTTCATTTCCTGCTTGTGGTATCGTTAGGGAGTT
CTGCAAGTCTCTAATGAGAAAACATTCATGCTGGATTTGTTTTGATGTTCCTTA-AAAAATGTTTGCCCGGATTAATAAC
--TCCTTTATGTCCATATTTAGTAGTATCATTTTCAGTTTTTTTCCTCAGAGTTTG-GTCCTTGGAGTATGTCAACTTGC
TTAAATGATT-TGCGGCTAGTCTTGATTAAACGCTTTATTAGGAAGAAAAGGCTGAAAGTGGGACACTGGGACCAAC-CA
ACTT-TCTGTTATGGACTCTTACCGAAT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ACTGCAAAACTAATCAACTATGATGATGTA
AACTGT-AACATGCTTTCCCTGGATTCAACTGATCATAACCATCGAACTTGGATGACCTTTCCATGATACATTATACATG
TGTATGCAATCTTGGATTTAGAATCCGAAACATATAGAGTATATTTATTTTTTGTTGTGTACTCACGATAACCATT--CG
CAG--TTTTCTGAAAGACTGGATGTG-TTCTTGGCTAACTCCCTTTTCCTATTTTCTGGCTTATGCAGATCAGCTTAACT
AGCCGACATGGTTATCCCTGCACCAGCTAGGGCGCCTGCAATCACCAAGTTCCTGAAGCCCTATGTTCTGAAGATGCACT
TCACAAACAACTTTGTGACGGCCCAGGTCATCCACACCCCATCGG-CGACCATCGCATGCGCAGCGAGCTCACAGGAGAA
GATCCTGAGGCCGAGCATGGAGTCGACGCGGGA------CGTGGCCGCGGCGGCCAAGATCGGGAAGCTGCTTGGCGAGC
GCCTGCTGTTCAGGGGCATCCCCGCGGTGTCCGTCTCCATGTCAAGAGACCAGACGTACCATGGCAAGGTCAAGGCCGTC
ATCGATTCTCTCACAGCCGCCGGCGTGAAGCTGCTGTGAACGGCGGTAGCCGATCATCAGTAGCTGATTTCCACCGGCTG
TTTAGTC-------------------CTTGAAGTGAAGTGCAGATAAATAGTGCCTTCAGGCTTATGATGTTTATCAGTT
TAG--CTT------------TTTCGACTTCTCGAACCTGTAACTG-CCCAGGCA-----TCACATTACAGATCAACATGT
TTCTGTTCACTGCCCAGGGTTTTCCGACACGTGTCGCGGGAATGAAATTGCACCTTTTGGAACACCTGCGTCGGGAATAA
TACTGTTACTTGGGAATCACGTT--------GTTGGATTCCAAGTATT-GAGACTGTTCAGGTCA----AGTCTCCCATG
CCAAATATAGTATGAGACCCTGAAACTTGGCTACCACGGAATAACATAAGAAGTACAGTCAGCTCGCACTCACAAGGAAA
G---------TTAAAGAAAAGAAAAGGCAGGGGCCAGTCCAAGAAACGTCAAAGTTCCTTTTGTCTAATGGTGCATCAGC
TCACACCTGCCGTGGCCCCTATATAAACGGCGTCGCGGCCGCCGCGGAGGAGGTCAAAGAGGAAGGATCACCAGCGGTTC
GACCGAGTTCATCTTCATCCTACAGGTGAATCGAACAAGTTCGAGTGAGTGGTGCTCCTGTTCTTCTCTTGGATCGTGTT
CTTGCTCTGCTTTTGGACCTGCTTGTTTCTCATTGTGTGTTGATGCAGCAGCTGGAGACTGAGA----------------
---------------AGAGGGGAGGCAGGCGGAACAGTTGATGGAACAGGAAGAGGATAACATGGTATCTTAATCAGCAT
CTGCACTTCTCCCTTTTCTTGTTTGTTTAGGTGTTTCTAGTCTCGATTCATCGGTTCGGATGGCAGTAACCCTCGAAACT
CGTCTCTCAGTCCTTACTAGGAAATTCCAGTTTGGTTGTCTTATGATCTTTT--ACTCCTCTGAATTTTCTTTTTTCCCT
GTTGGTTTGGTTGTACTGCATGCGCTTAGCAGGGCGCTTAGCCCCTAATCTTTCAGATTGGTTAGTCACAACTGGTGTTT
ATCTTCTTAT--TAGGATCTAGCTGGGGGTGGCATGCTG---
>chr4B_180
--------------------------------------------------------------------------------
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---------------------------------ACACCTAACTTTATATGCC-----ACGGAAGAAGATAATGATGGCAT
TCAAAGGACAACATGTCTACCTAATACAATATTCTTAAAGTTAAAATTTCATTTCCTGCTTGTGGCATCGTTAGGAAGTT
CTACAAGTCTCAAATGAGAAAACATCCATGCTGAATTTGTTTTGATGTTCCTTTCAAAGATGTTTGCCTGGTTTAATAAC
CCTCATTTATGTCTAGTTGG---AGTAGCACTTTCAGTTTTTCTCCTTGGGGTTCAAGTGCTTGGAGTATGTTGACTTGT
TTAAATGGTT-TGCTGCAAGTCTTGAATAAAAGCT---TTAGGAAGAAAAGGCTGAAAGCGGGACACTGGGGCCAACACA
ACTAGTCTTCCATGAACTCCTAAAAATCTTATCCTGTGTGTCCACTTTGTACTAGCATAT--------------------
--------------------AAGTGACTTAACTGCTGCATACTAAAAATTCTTCACTTTCAGGCATTCGGTTTTGAATTA
ATTACTACTTACTGGATCACTTTATCACTTTCTCAACTGCTGAAATTGTCACTGCAAGAATAATGAACTATGATGATGTA
AACTGT-AACATGATTTCCTTGGATTCAACTGACAATAAGCATCAAACTTGAGTGCCCTTTTTATGATACATTATACATT
TGTATGCAATCCTTGAGTTAGAATCTGAAACATATACC--ACC----TTTTTTGTTGTGTGCTAAGGATAACCATTTGTG
CAGTTTTTTATGAAACACTGCATGTG-TTCTTGGCTAACTCTCATTTTCTATGTCCTGGCTTACATAGATCAACTTAATT
AGCCAACTTGGTTTCTC--GCACCAACTAGGGCACCTGCAATCACCAAGGTCCTAAAGCCATATGTTCTGAAGATGCACT
TCTAAAGCAACTTTG-----------------------------------------------------------------
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>chr4B_180
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---------------------------------ACACCTAACTTTATATGCC-----ACGGAAGAAGATAATGATGGCAT
TCAAAGGACAACATGTCTACCTAATACAATATTCTTAAAGTTAAAATTTCATTTCCTGCTTGTGGCATCGTTAGGAAGTT
CTACAAGTCTCAAATGAGAAAACATCCATGCTGAATTTGTTTTGATGTTCCTTTCAAAGATGTTTGCCTGGTTTAATAAC
CCTCATTTATGTCTAGTTGG---AGTAGCACTTTCAGTTTTTCTCCTTGGGGTTCAAGTGCTTGGAGTATGTTGACTTGT
TTAAATGGTT-TGCTGCAAGTCTTGAATAAAAGCT---TTAGGAAGAAAAGGCTGAAAGCGGGACACTGGGGCCAACACA
ACTAGTCTTCCATGAACTCCTAAAAATCTTATCCTGTGTGTCCACTTTGTACTAGCATAT--------------------
--------------------AAGTGACTTAACTGCTGCATACTAAAAATTCTTCACTTTCAGGCATTCGGTTTTGAATTG
ATTACTACTTACTGGATCACTTTATCACTTTCTCAACTGCTGAAATTGTCACTGCAAGAATGATGAACTATGATGATGTA
AACTGT-AACATGATTTCCTTGGGTTCAACTGACAATAAGCATCAAACTTGAGTGCCCTTTTTATGATACATTATACATT
TGTATGCAATCCTTGAGTTAGAATCTGAAACATATACC--ACC----TTTTTTGTTGTGTGCTAAGGATAACCATTTGTG
CAGTTTTTTATGAAACACTGCATGTG-TTCTTGGCTAACTCTCATTTTCTATGTCCTGGCTTACATAGATCAACTTAATT
AGCCAACTTGGTTTCTC--GCACCAACTAGGGCACCTGCAATCACCAAGGTCCTAAAGCCATATGTTCTGAAGATGCACT
TCTAAAGCAACTTTG-----------------------------------------------------------------
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>chr4B_180
--------------------------------------------------------------------------------
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---------------------------------ACACCTAACTTTATATGCC-----ACGGAAGAAGATAATGATGGCAT
TCAAAGGACAACATGTCTACCTAATACAATATTCTTAAAGTTAAAATTTCATTTCCTGCTTGTGGCATCGTTAGGAAGTT
CTACAAGTCTCAAATGAGAAAACATCCATGCTGAATTTGTTTTGATGTTCCTTTCAAAGATGTTTGCCTGGTTTAATAAC
CCTCATTTATGTCTAGTTGG---AGTAGCACTTTCAGTTTTTCTCCTTGGGGTTCAAGTGCTTGGAGTATGTTGACTTGT
TTAAATGGGT-TGCTGCAAGTCTTGAATAAAAGCT---TTAGGAAGAAAAGGCTGAAAGCGGGACACTGGGGCCAACACA
ACTAGTCTTCCATGAACTCCTAAAAATCTTATCCTGTGTGTCCACTTTGTACTAGCATAT--------------------
--------------------AAGTGACTTAACTGCTGCATACTAAAAATTCTTCACTTTCAGGCATTCGGTTTTGAATTG
ATTACTACTTACTGGATCACTTTATCACTTTCTCAACTGCTGAAATTGTCACTGCAAGAATGATGAACTATGATGATGTA
AACTGT-AACATGATTTCCTTGGATTCAACTGACAATAAGCATCAAACTTGAGTGCCCTTTTTATGATACATTATACATT
TGTATGCAATCCTTGAGTTAGAATCTGAAACATATACC--ACC----TTTTTTGTTGTGTGCTAAGGATAACCATTTGTG
TAGTTTTTTATGACACACTGCATGTG-TTCTTGGCTAACTCTCATTTTCTATGTCCTGGCTTACATAGATCAACTTAATT
AGCCAACTTGGTTTCTC--GCACCAACTAGGGCACCTGCAATCACCAAGGTCCTAAAGCCATATGTTCTGAAGATGCACT
TCTAAAGCAACTTTG-----------------------------------------------------------------
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>chr4B_180
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------ACACCTAACTTTATATGCC-----ACGGAAGAAGATAATGATGGCAT
TCAAAGGACAACATGTCTACCTAATACAATATTCTTAAAGTTAAAATTTCATTTCCTGCTTGTGGCATCGTTAGGAAGTT
CTACAAGTCTCAAATGAGAAAACATCCATGCTGAATTTGTTTTGATGTTCCTTTCAAAGATGTTTGCCTGGTTTAATAAC
CCTCATTTATGTCTAGTTGG---AGTAGCACTTTCAGTTTTTCTCCTTGGGGTTCAAGTGCTTGGAGTATGTTGACTTGT
TTAAATGGTT-TGCTGCAAGTCTTGAATAAAAGCT---TTAGGAAGAAAAGGCTGAAAGCGGGACACTGGGGCCAACACA
ACTAGTCTTCCATGAACTCCTAAAAATCTTATCCTGTGTGTCCACTTTGTACTAGCATAT--------------------
--------------------AAGTGACTTAACTGCTGCATACTAGAAATTCTTCACTTTCAGGCATTCGGTTTTGAATTG
ATTGCTACTTACTGGATCACTTTATCACTTTCTCAACTGCTGAAATTGTCACTGCAAGAATGATGAACTATGATGATGTA
AACTGT-AACATGATTTCCTTGGATTCAACTGACAATAAGCATCAAACTTGAGTGCCCTTTTTATGATACATTATACATT
TGTATGCAATCCTTGAGTTAGAATCTGAAACATATACC--ACC----TTTTTTGTTGTGTGCTAAGGATAACCATTTGTG
CAGTTTTTTATGAAACACTGCATGTG-TTCTTGGCTAACTCTCATTTTCTATGTCCTGGCTTACATAGATCAACTTAATT
AGCCAACTTGGTTTCTC--GCACCAACTAGGGCACCTGCAATCACCAAGGTCCTAAAGCCATATGTTCTGAAGATGCACT
TCTAAAGCAACTTTG-----------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr4B_180
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------ACACCTAACTTTATATGCC-----ACGGAAGAATATAATGATGGCAT
TCAAAGGACAACATGTCTACCTAATACAATATTCTTAAAGTTAAAATTTCATTTCCTGCGTGTGGCATCGTTAGGAAGTT
CTACAAGTCTCAAATGAGAAAACATCCATGCTGAATTTGTTTTGATGTTCCTTTCAAAGATGTTTGCCTGGTTTAATAAC
CCTCATTTATGTCTAGTTGG---AGTAGCACTTTCAGTTTTTCTCCTTGGGGTTCAAGTGCTTGGAGTATGTTGACTTGT
TTAAATGGTT-TGCTGCAAGTCTTGAATAAAAGCT---TTAGGAAGAAAAGGCTGAAAGTGGGACACTGGGGCCAACACA
ACTAGTCTTCCATGAACTCCTAAAAATCTTATCCTGTGTGTCCACTTTGTACTAGCATAT--------------------
--------------------AAGTGACTTAACTGCTTCATACTAAAAATTCTTCACTTTCAGGCATTCGGTTTTGAATTG
ATTACTACTTACTGGATCACTTTATCACTTTCTCAACTGCTGAAATTGTCACTGCAAGAATGATGAACTATGATGATGTA
AACTGT-AACATGATTTCCTTGGATTCAACTGACAATAAGCATCAAACTTGAGTGCCCTTTTTATGATACATTATACATT
TGTATGCAATCCTTGAGTTAGAATCTGAAACATATACC--ACC----TTTTTTGTTGTGTGCTGAGGATAACCATTTGTG
CAGTTTTTTATGAAACACTGCATGTG-TTCTTGGCTAACTCTCATTTTCTATGTCCTGGCTTACATAGATCAACTTAATT
AGCCAACTTGGTTTCTC--GCACCAACTAGGGCACCTGCAATCACCAAGGTCCTAAAGCCATATGTTCTGAAGATGCACT
TCTAAAGCAACTTTG-----------------------------------------------------------------
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>chr4D_987
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-------------------------------------------------------------------------CTTAACT
ACGTGATATGGTTATCCCTGCACCAGCTAGGGCACCTGCAATCACCAAGTTCCTGAAGCCTTATGTTCTGAAGATGCACT
TCACAAACAATTTTGTGAGCGCTCAGATCATCCACACCCCATCGG-CGACTATCGCATGTGCAGCGAGCTCACAGGAGAA
GATCTTGAGGCCGGGCATGGAGTAAAAGCGAGA------CGT---------GGCCAAGATCGGGAAGGTGCTCAGCGAGC
GCCTGCTGTTCCGGGGCGTCCCCGCGGTGTCTGTCTCCATGTGGAGAGACAAGACGCACCGTGTCAAGGTCAAGGCTGTC
ATCGATTCTCTCACGGCCGCCGGCGTGAAGCTACTGTGAACGATGGCAGCTGATCATCAGTAGTCGGTTTTCACCAGCTA
TTTAGTTCTGACATATGGCAGTTGTTCTTGAAGTGGAGTGCAGATAAATAGTGTCTTCGGGCTTATGATGTTTTTAGTTT
AGCTTCTTCCCCGTGCTTGATTTCGGCTTCTCAAATTTATAATTATCCCGGGCATCACTTCACAATACATATCAACATGT
TTCTCTCTGAAACACGGGGTTTTCCGCGCATGTGTT-GGGATTGAAATTGCTACTGTTGGAACACCTGTGTTGGGAATAA
TACTGTCACTTGAGAATCACGTT--------GTTGGATTCCAAGACTTAGAGATTTTTCAGGTCAAGTCAGTCTCCCGTG
CCAAATATAGTATGAGACCCTAAAACTTGACCACCACAAAATAGCATCAGAAGTACAGTCAACTTGCCACCGC-------
--------------------------------------------------------------------------------
---------------------------------------------------------AGAGGAAGGATCGCCGGGG----
------GTTCATCTTCATCCTACAGGTGAATCCAACAAGTTCGAGCGAGTGGTGCTCCTGTTCTTCTCTTGACTGGTGTT
CTAGCTCTACTTTTGGACCTGCTTGTTTCTCATTTTGTGTAGATGCAG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr4A_993
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
AGCTGATATGGTTATCCCTGCGCCAACTAGGGCGCCTGCAATCACCAAGTTCCTGATGCCTTATGTTCTGAAGATGCACT
TCACAAACAACTTTGTGAGCGCCCAGATCATCCACACGCCATCGGGCGACTATCGCGTGTGCAACGAGCTCACATGAGAA
GATCTTGAGGCCGGGCATGGAGTAGAAGTAGGA------CGT---------GGCCAAGATCGGGTAGGTGCTCGGTGAGC
GCCTGCTGTTCCGGGGCGTCCCCACGGTGTCTGTCTCCATGTGGAGAGACCAGACGTACCATGTCAAGGTCAAGGTTGTC
ATCGATTCTCTCACGGGCGCCGGCGTGAAGCTACTGTGAACGATGGCAGCTGATCATCAGTAGTCGGTTTTCATCGGTTG
TTTAGTTCTAACATATGGCAGTTGTTCTTGAAGTGGAGTGCAGATAAATAGTTTCTTCATGCTTATGATGTCCCCATGGT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------GCAGACGGAGCAGTTGATGGAACAGGAAGGGGACAACATGGTATCACAATCAACAT
CTGCACTGCTCCTTTTTCTTGTTT--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>SNPs
-SSSSSSSSSS---------------------------------------------------------------------
------------------------------------------------------------------S-------------
-------------------------------------------------------------------S------------
------------------------------------------------S--------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
-------------S-----------------------------------------S-----S------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
-------------------------------S--S---------------------------------------------
-S-------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------SSSSSS-----------------------------------------
--------------------------------------------------------------------------------
---------------------------------S--------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-S------------------------------------------
----------------------SSSSSSSSS-------------------------------------------------
----------------------------------------S---------------------------------------
----SSSSS----------------------------------------S------------S-----------------
----------------------------------S------------------------S--------------------
--S----------------------------------------------------------------------S------
----------------S-----------S------------------------------------------SSSSSSSSS
SSSSSSSSSSSSSSS-----------------------------------------------------------------
--------S------------------------------------------S----------------------------
----------S------------------S--S----------------------------S------------------
----------------------------------------S------------------------------S--------
------------------------------------------
>forward_228
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------ACTTTATTTGCTGCGGAAGAAGG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_2292
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------TGGTTCGGATGGCAGTAACC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
