>input_sequence_82966
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------ATGCACGGGAAACCACT------GGCCGGAGTGCTCGCCGCCGCCCTTCTGCTCTTGGCATCCG--CCTCTCCG
GCCGTCGGAGCGTACAGCGGCAAGGGCGGCGTCAGCGACGCCGCGGCGGGGGCGAGAGCTAGCGCTCATGTTCCCACGGC
GTCGACATTGACGAGGCGGCTGGAGGATGAGGTGGAGCCGGAGCTGAGTTGGGCGGACAACCTCCTTGGGGGAAACGGCG
TCAGCTACGACACCTTGGACCGGAACGGGCCAGCGTGCCCGCGGCATGACTCATGCGCGGGCAAAAAACCAGGAGAAGCA
TACAC---CCGCCCGTGCAACTACAGGGAAAAATGTGCGCCGCACTAA--------------------------------
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-------------------------
>chr2B_1_TraesCS2B01G629900
AAGATCTGCTAGCGTAAGATACCCCTTCGCTCCTACGCACGCAAGGGCACCCGGGCCATGGCTTTCCGCTGACTCCTGTT
GCGCAGCCACCGGCCTACCTCATATCCTATGGCCTTAGGGCCATGGAGGTGTGGTGGATCCCGGTCCATGACGGCAGGAG
G-------CTTTCGTATATAGGTTATATTTTTTGAAGTTTGGTAGGGTTTGTGTCCTGCTCAGAAAGGCGGGACTGCA--
-ACGACTTTCTGAGGATGGAATAAGGCTCTCTCCACCTAGCCCCCATCCCGGTGATGCTTCTAGCGTCATCGATGGGTGT
GTGGAGGTTTGTTGCCGGCAGATCTCGCGGGATTCGGTCGGCGTTTGTCTTAACTGGATCCACTTGGATCCAGTTT-TGT
TC-GT----GAGTCTACGAGTTGGATCCTTCCGATCTACGCTTCTCTTCATCGGTGGCGTTTGCTGTTCTGGTGCGCTGG
TCCTCTGGGGCCTTAGCATGACAACTTCCCGAATGTCTACTACTATAAGGTTTGCC-GGCTCCGGTAATGG-AGGGCGAT
GACGGC--ACGTGTCTTCGGTTCTCTCTAGTGCTAGTAGTCATCGCTAGGTGGTCTACGGACCTGTATGTAATTTTTTAT
TTCTGGTGTTCTTTATACTATCTTGACAGTTGATGAATAGATTAGAAGTTTTCTAGAAAAAAAAAAGAAAAACAGAAGAG
AAAGATCTGGTAGCAAGTACTATTTCTTTTGTTGAAACGTAGTATCTCTAGTAGGTTGTTTTTCTTTTCTTTTCTTGAAC
GGCATCTTGTACCTAGCTTTGCTGGTAGTACACGTCGATGCT-----------------CAAATGGAACTGGTAGGGA--
----CTCCCACAATGCGTAAGTAGGTGGATGTGTTA---TTTTGGTTGGTTATCCGGTCGAAATCATTGAGCGCACTAGC
TAGCTACTCAAACCATGCATATATACAACCTTGGGCAACAAAGATTGCCCAGCGCGCGACCAGCATATACACGGTGGCAC
AGCACAATGCACGGGAAACCACT------GGCCGGAGTGCTCGCCGCCGCCCTTCTGCTCTTGGCATCCG--CCTCTCCG
GCCGTCGGAGCGTACAGCGGCAAGGGCGGCGTCAGCGACGCCGCGGCGGGGGCGAGAGCTAGCGCTCATGTTCCCACGGC
GTCGACATTGACGAGGCGGCTGGAGGATGAGGTGGAGCCGGAGCTGAGTTGGGCGGACAACCTCCTTGGGGGAAACGGCG
TCAGCTACGACACCTTGGACCGGAACGGGCCAGCGTGCCCGCGGCATGACTCATGCGCGGGCAAAAAACCAGGAGAAGCA
TACAC---CCGCCCGTGCAACTACAGGGAAAAATGTGCGCCGCACTAACGGCTCGTAAACGCAGCGTGCCAGCCGAAATA
TATGCATGTATCGGCGCCAGAAATCAGATCTCAATAAGCGCAACATGCGTCGGTGAGCCGATTATTAACACGTAATCGTT
GGAATGCAATCCAAGATTACACACTACCCCTTGCGTTCACTGTTCTTTTTTAATTGGACGTACGTAGACATGTTTTACTG
TGTTTGTTCACTCATTTTAATCCTTTATTACATAGTCCATGTTAAAATATCCAAATTGTATCACACATGCAAAAAAATGA
CGGAGTACCCGCCTCCTTGCGCTTCTCGCGGGCGAGAGAGTCTCTTGCCCATCCATTGTCCGGTGGCTTCTGTCGGGAGC
CTCTCTCGGCCGCTCCTGGATGTCTTATCTGCCCAGACAGCTCAGACCCGGGCAACCCAGCTGGAGGGTCCATGACAAGT
TGACCACCGGGTTTGCTAGGGGCCGTAGTCATTGGACGGCGTCGGGCGCTCCCGTGGTGTCAGCGCACGTACCACCAAGG
CGATCATCGGCTTCACCCCGAGGCGCGTCGACAGCAGGCCCAAGAGGATCGTGCAGCCCAACTGAAGATTCGTTGGGTCG
GAATGGGCCCACTGAGCCCACTCGCCTGGCAGCTCGCTACTTAAGGCCACAGACGACAGAGAGATAGGCATCCAGA--AG
GATCA-GGAC-AGACGGCGGCTTCTCTCCCTTC-CCC-----ACCTACTTCCCTTCCTTCTTCCCCACAAATAGCAAGGC
TGGAT---T-GTAATTCGAATTCGTGGAATAT-ATTGTGAGCTAGCGATAGATCGATCTGGTACCTAACATCCTGGTATC
AGAGCCCAGCACCACTCTCTCTCTCTCCGCCGCGGCGA--CCTGGAAACCCACCGGAGAATCCAAGCGCGGCAAGCCTTC
GTCGCCGCCATTGACCCATCGCTCAAGGAGTACCTCGACAAGCTCCATCAGGACGCCAAGGCCGACTCCGCCCACGTCCT
CAAGCAGCTGCAGATGCAGTCCTCG
>chr2D_1
AAGATCTGGTAGCGCAAGATACCCATTCGCTCCTACGCACGCAAGGGCACCCGGGCCAGGGTTTTCCGCTGACTCGTGTC
GCGCAGCCACCGGCCTACCTCATATCTTATGGCCTTAGGGCCATGGAGGTGCGGTGGATCCCGGTCCATGCCGGCAGGAG
G-------CTTCCGTATATAGGTTATATTTTGTGAAGTTTGGTAGGGTTTGTGTCCTGCTGAGAAAGGCTAGATT---GC
AGTGATTTTCTGAACATGGAATAAGGCTCTCCCCACCTAGCCCCTGTCCCGGTGATGCTTCTAGTGTCATCGATGGGTGT
GTGGAGGTTTGTTTCCGGCAGATCTCGCGGGATTCTGTCGGCGTTTGTCTTAACTGGATCCACTTGGATCCAGTTTTTGT
TC-GT----GAGTCTACGAGTTGGATCCTTCCGATCTACGCTTCTCTTCATCGGTGGCGTTTGCTGTTCTGGTGCGCTGG
TCCTCTGGGGCCTTAGCACGGCAACTTCCCGACTGTCTACTATAATAAGGTTTGCC-GGCTCCGGTGATAG-AGGGCGAT
GACAGC--ACGTGTCTTCGGTTCTCTCCAGTGCTTGTAGTCTTCGCTAGGTGCTCTACAGACCTGTATATAATTTTTTAC
TTCTGGTGTTCTTTGTACTATCTTGACAGCTGATGAATAGATTAGAAGTTTTCTAGAAAAAAAACAGAA--------GAG
AAAGATCTGGTAGCAAGTACTATTTCTTTTGTTGAAACGTAATATCTCTAGTAGGTGGTTTTTTTTTTCTTTTCTTGAAC
GGCATCTTGTACCTAGCTTTGCTGGTAGTACACGTCGATGCTCGCACACGCTTGCTGCTCAAATGGAACCGGTAGGAA--
----CTCCCACAATGCGTAAGTAGGTGTGTGTGTTAGTGTTATGGTTGGTTATCCGGTCAAAATCATTGAGCGCACTAGC
TA----CTCGAACCATGCATATATACCACCTTGGGCAACGAAGAATGAGGAGCGCGCGACCAGCATATACACGGT-----
AGCACAATGCAAGGGAAACCACTGCCACTGGCCGGAGTGCTCGTCGCCGCCCTTCTGTTCCTGGCATCCGCGCCTCTCCG
---------GCGTACAGCGGCAAGGGTGGCATCAGCCACGCCGCGGCGGGGGCAAGAGCTAGCGCTCATGTTCCCACGGC
GTCGACATTGACGAGGCGGTTGGAGGATGAGGTGGAGCCGGAGCTGAGTTGGGC--------------------------
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-------------------------
>chr7B_81
--------------------------------------------------------------------------------
GCGCTACCACCGACATGTCTCGTCTCCTATGGCCTTAGGGCCATGGAGGTGTGGTAGACCTG-ACCCTTGCTGGCGGGAG
G-------GCTTACTTTTTGGATTT--TTTTACCAGTTTTGTTAGGGTTTGTCTCCTGCTTAGAGAGGTGAG---GCA--
-GCGGCTCTTTTAAGATGAAATAAGGTTCACCTTGCCTAGATCCCGTCCCAGTGGTGC-TCTAGCATTGTCTGAGTGCGT
GTGGTGGTTTGTCTCTGGTGGATCTCGTGGAGTTCGGTTGGCATTTGTCTTTGGTGGATCCGGTCTTCCTTCGTTTGTGT
TC-TT----ATGTCTACAATTTGGATCCTTTCGATCCGCGCTTC---TCATCGGTGGCGGTTGTTGTTCTTGTGCATTGG
TCCTCTAGGTCCTTAGCATGACGACTTTCCGACTGTTTACTACAATAAGATTTCCACAACTCCAGTGAAGGAGGGGCGAT
GACGGTGG-CGCTCCTTCGGCTCGCTCCAGTACTTGTAGTCGTCGCTATGTGGTATTCGGATCTGTATGTAA-TTTTTAC
TTATGGTGTTCTTTGTTCTACCTTGACAGATGATGAATAGATAAGAAGTTCTTGCTGGAAAAAA----------------
--------------------------------------------------------------------------------
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-------------------------
>chr5D_90
--------------------------------------------------------------------------------
---------CCGGCCTACCTCGTCTTCTTTGGCCTTAGGACCGTGGAAGTGCGGTGGATCCCAATCTTTGCCGACGGGAG
G-------GCTTCGTTTTTAGTTTA---TTTACGAGTTTTGCTCGAGTTTGTGTCCTGCTCAGAAAGGCGGGACAACGAC
AC---CTTCTTGCAGATGGAATAAGATTCTCTCCGCCTACCTCCATTCC-GTTGATGCTTCTAGCATCATCGGAGAGCAT
GTGGAGGTTTGTCTTCGACGGATCTCAAGGGATTCAGTCAGCGTTT-TCTTCGATGGATCCGCTTGGATCCAGTCTATGT
TG-GT----GTGTCTACAGATTGGATCTTTCTGATCTACACTTCTCTTCATCGACGGCGGTTGCTATTCTAGTGCGCTAG
TCCTATGAGGTCTTAACATGACGACTTTCCGACTGTCTACTACGACAAGGTTTGTCCGACTCGAGTGATGGAGGGGCGAT
GACGGCAG-CACTTCTTCGGCTCGCCCCAGTGCTTGTAGTCGTCGCTAGGTGGTATAC-GATATGGATGTAA-TTTTTAC
TTCTGGTA---TTTGTACTACCTTGATAGGCGACGAATAAATTAGAAGTTTT----------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr4A_91
--------------------------------------------------------------------------------
----------CGGTCTACCTCGTCTCTTGTGGTCTTAGGGCAATGGAGGTGCGGTGGATCCCGGCCCTTGCTGGCGGGCG
GGGGGGAGGGGTCCGTTTTCATGTT--TTTTCTGAGTTTTGTTTGGGTTTGTGTCCTGCTCAGAGAGGCGAG---GCGGC
GGCGGCTCTTTGAAGATGGAATAAGGTTCTCCCCACCTAGTCTCCGTCCCTGTGGTGTTTCTAGCATCGTTGGAGGGCGT
GTGAAGGTTTGTCTCGAGCGGATCTCGCGGGATTCGGTCGGCGTTTGTCTTTGGTGGATTCAGGTGGATCATGTCTTCGT
GT-GTCTATAGGTT----------ATCTTTCCGATCTACGTTTCTCTTCATCGGTGGTGGTTGTTGTTCTGGTGCGGTGG
TCTTATGGGAACTTAGCACGACGACTTCCTGACTGTCTACTACAACAAGGTTTGCCCTGCTCCGATGAGGGAGGGGCGAT
GACGGCGG-TGCCTCTTCATCTCGCTCCAGTGCTTGTAGTCATCGCTAGATGGTCTACAGACCTGGATATACTTTTT-AC
TTCTAGTGTTCTTTGTACTACCTTGACAGTTGATGAATAGATCAAAAGTTTTTCTCGTAAAAGAAGAAA-----------
--------------------------------------------------------------------------------
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-------------------------
>chr4A_91
--------------------------------------------------------------------------------
----------CGGTCTGCCTCATCTCTTGTGGCCTTAGGGCCATGGAGGCACAGTGGATCCTGGTCCTT-CTGGCGGA--
------ACGGTTCCATTTTTGCATG--TTTTTTGAGTTTTGTTAGGGA-TATGTCCTGCTTAGAGAGATGAA---GCGGC
GACAAGTCTCTAGAGATGGAATAAGGTTCTCCCCGTCTAACCCCCATCCCACCGGTGC-TCTAACATCATCGGAGGGCAT
GTGGAGCTTTGTCTCCGGCAGATCTAGGGGGATCCGGTCGGGGTTTGTCTTTGTTGGGTGCATGTGGATCCGGTCTTCAT
TTAGT----GTGTCTACAGGTCGGATCCTTCCGATCTACGCTTCTCTTCATCGGCGGCGGTTGTTGTTCTGGTGTGCTGG
TACTATATGACCTTAGCACGATGACTTTCCGACCGTCTGTTACAACTAGGTTTGCCAGGCTCCGATAAGGGAGGGACAAT
GATGGCGG-CACGCCTTCGGCTCACTCCAGTGCTTGTATTAATCGCTAGGTGGTCTAAGGACATGGATGTAATTTTT-GC
TTCTAGTGTTCTTTTTACTAACTTGACAGTTGAGT-ATAGATCAAAGTT-------------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr4D_95
--------------------------------------------------------------------------------
--------------CTACCTCGTCTCCTGTGGTCTTAGGGCAATGGAGGTGCGGTGGATCTCGGCCCTTGCTGGCGGGGG
G-------TC--CGTTTTTCATGTT--TTTTTTTAGTTTTGTTTGGGTTTGTGTCCTGCTCAGAGAGGCGAG---GCGGC
GGTGGCTCTTTGAAGATGGAATAAGGTTCTCCCCGCCTAGTCTCCGTCCCTATGGTGTTTCTAGCATACTTGGAGGGCGT
GTGAAGGTTTGTCTCGGGCGGATCTCGCGGGATTCGGTCGGCGTTTGTCCTTGGTGGATTCAGGTGAATCATCTCTTTGT
GT-GTCTACATGTT----------ATCTTTCCGATCTACGTTTCTCTTCGTCGGTGGTGGTTGCTGTTCTGGTGTGGTGG
TCTTATGGGACCTTAGCACGACAACTTCCTGACTGTCTACTACAACAAGGTTTGCCCGGCTTTAATAAAAGAGGGGCGAT
GACGGCGG-CGCCTCTTCGGCTCGCTCCAGTGCTTGTAGCCATCGCTAGGTGGTCTACGGACCTGGATATACTTTCT-AC
TTCTAGTGTTCTTTGTACTACCTTGACGGTTGATGAATAGATCGAAAGTTTTTCTTGTAAAA------------------
--------------------------------------------------------------------------------
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-------------------------
>chr1B_98
--------------------------------------------------------------------------------
-----------------CCTCATCTCCTATGGTTCTTGGACCATGGAGGTGCGATGGATCAAAACCGTTACCGGCGAGAG
G-------GCTTCGTTTTTAGGTGC--TTTTCTAAGTTTTGTTAGGGTTTGTATCATGCTCAAGAAGGCGAG---GCGGC
GTCGGCTTCCTGAAGATGGAATAAAGTTTTCCCCGCCTAGCCCCGTTCT--GGTATACTTCAAGCGTCGTCATAGGGCGT
GTGGAGATGTATCTCCGGCGAATCTCTTGGGATCCGGTCGACGTTTGTCTTTGGTGGATCCGCCTAGATCCGGTCTACGT
CT-GT----GTGTCTGCAGGTTAGATCCTTCCGATCTACGCTTCTCTTCATCGGTGACGGTTGTTGTTATGGTGCGCTGG
TCCTATGGGGCCTTAGCATGACGACTTCCCGATTGTCTACTACAACAATGTTTGCTCGACTCTGACAAGGAAGGCGCGAT
GATGGCGG-CGTGCCTTCGGCTTGCTCCAATGCTTGTAATCATCGCTAGGTGGTCTACGGACCTGGATGCAAATTTT-AC
TTCTTGTGTTCTTTGTACTACATTGACAGTTGATGAATACAACAAAATTTTTTTCGCAAAAGAAAAAA------------
--------------------------------------------------------------------------------
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-------------------------
>chr1A_99
--------------------------------------------------------------------------------
------------------CTCATCTCCTATGATCCTTCGACCATGGGGGTGAGGTGGATCCCAATCTTTGCCGGTAAGAG
A-------GCTTTGTTTTTAGGTGC--TTTTTTAAGTTTTGTTAACGTTTGTATCATGCTTAAGAAGGCGAG---GCAAC
GTCGGTTTCTTGAAGATGTAATAAAGTTCTTCCGGCCTAGCCCCCGTTTTGATGATGCTTCAAGCGTCGTCGGAGAGCGT
GTGGAGGTGTATCTCCGACGAACCTCGTGGGATCCGGTCGGCATTTGTCTTTGATGGATTCGTCAAGATCCAGTCTACGT
CT-GT----GTGTTTGCACGTTGGATCTTTCCGATCTACGCTTCTCTTCATCGGTGGCGATTGATGTTCTAGTGCGCTGG
TCCTATGAGGCCTTAGAACGACGATTTCCCAATTGTCTACTACAACAATGTTTGCTCGGCTCTGACGAGGGAGGAGCGAT
GACGAC--A-GTGCCTTCGGCTCGCTCCAGTGCTTATAGTCATCGCTAGGTGGTCTACGAACGTGCATGTAAATTTT-AC
TTCTTGTGTTTTTTGTACTACCTTAACATTTGATGAATATGTCAAAGGTTTTCTCGCAAAAGAAAAAA------------
--------------------------------------------------------------------------------
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-------------------------
>chr3D_105
--------------------------------------------------------------------------------
------------------------TCCTATGGTCCTTGGACCATGGAGGCGCGGTGGATCTCGGTCCTTGCCGGCGGAAG
G-------GCTCCATTTTTAGGTGC--TTTTCTGAGTGTTGTTGAGGTTTTTGCTATGCTCAAGAAGACGAG---GGAGC
GGTGGCTTCTTGAAGATGGAATAAGATCCTACCCGCCTAGCCCGCGTCCTGGTGATGATTCAAGCGTCATCAGAAGGCAT
GTGGAGGTTTGTCTCCGATGGATCTCGTGG-----GGTCGGCGTTTGTCTTGGGTGGATCCGATTGGATCCGGTCTTCGT
TC-GTCTACGTGTCTGCAGGTTGGATCCTTCCGATCTACGCTTCTCTTCATCGGCGACGGTTGCTGTTCTGGTGCGCTGG
TCCTATGAAGCCTTAGCACGACGACTTCCCGACTGTCCACTACAACAATGTTTCTCCCGCTCCGACGAGGCAAGGGCGAT
GACGGCGGACGCGTCTTCGGCTCGCTCCATTGCTTGTAGTCGTCGCCAGGTGGTCTACGGACATGGATGCAAATTTT-AC
TTTTATTGTTCTTTGTACTATCTTGACAGTTGATGAATTGACCGGAAGTTTTCTCGAAAAAAAAA---------------
--------------------------------------------------------------------------------
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-------------------------
>chr2D_695
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------GAAAAG
AAAGATCTGGTAGCAAGTACTATTTCTTTTCTTGAAACGTAATATTTGTAGTAGCTAGTTTTTC----CTTTTCTTGAAC
GGCATCTTGTACCTAGCTTTGCTGGTAGTACACGTCGATGCTCGCACACGCTTGCTGCTCAAATGGAACCGGTAGGAA--
----CTCCCACAATGCGTAAGTAGGTGTGTGTGTTAGTGTTATGGTTGGTTATCCGGTCAAAATCATTGAGCGCACTAGC
TA----CTCGAACCATGCATATATACCACCTTGGGCAACGAAGAATGAGGAGCGCGCGACCAGCATATACACGGT-----
AGCACAATGCAAGGGAAACCACTGCCACTGGCCGGAGTGCTCGTCGCCGCCCTTCTGTTCCTGGCATCCGCGCCTCTCCG
---------GCGTACAGCGGCAAGGGTGGCATCAGCCACGCCGCGGCGGGGGCAAGAGCTAGCGCTCATGTTCCCACGGC
GTCGACATTGACGAGACGGCTGGAGGATGAGGTGGAGCCGGAGCTGAGTTGGGCGGACAGCCTCCTTGGAGGAAACAGCC
TCGGCTACGACACCTTGGAGCCGAACGAGCCAGCGTGCCAGCGGCATGACTCATGCGCGGGCAAAAAACCAGGAGGAGCA
TACAC---CCGCCCGTGCAACTACAGGGAAAAATGTCCGCCGCACTAACGGCTCGTGAACGCAGCGTGCCAGCCGATATA
TATGCATGCATCGGCGCCACAAATCAGTTCTCAATAAGCGCAACATGCGTCGGTGAGCCGATT-----------------
--------------------------------------------------------------------------------
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-------------------------
>chr2A_765
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------TTTTCTTTTCTTGAAC
GGCACCTTGTACCTAGCTTTGCTGGTAGTACACGCCGATGCTCGCACACGCTTGCTGCTCAAATGGAACCGGTAGGGACT
CCCTCTCCCACAATGCGTAAGAAGGTGTATGTGTTAGTGTTATGGTTGGTTATCCGGTCAAAATCATTGAGCGCACTAGG
TA----CTCGAACCATGCATATATACCACCTTGGGCAACAAAGAATGAGGAGCACGCGACCAGCATATACACGGT-----
AGCACAATGCAATGGAAACCACTGCCACTGGTCGGAGTGCTCGCCGCCGCCCTTCTGCTCCTGGCATC--CGCCTCTCCG
---------GCGTACAGCGGCAAGGGTGGCATCAGCGACCTCGCGGCGGGGGCGAGAGCTAGGGCTCATGTTCCCACGGC
GTCGACATTGACGAGGCGGCTGGAGGATGAGGTGGAGCCGGAGCTGAGTTGGGCGGACAGCCTCCTTGGGGGAAAAGGCC
TCGGCTATGACACCTTGGACGGGAACGGGGCAGCGTGCCAGCGGCATGACTCATGCGCGGGCAAACAACCAGGAGGCCCA
TACACCGGCCGCTTGTGCATCTACAGGGATGACTGT---CCGCACTAACGCCTCATGAACGCAGCGTGCCAGTCGATA--
--TGCATGCATCAGCGCCAGTCGATATGCGTGCCAGTCGATATGCATGTGTCGTGAGCCGATTATTAGCATGTAATCGTG
GGAATGCAACGCAAGATTACCCACTACCCCTTCCGTTCACTGT-------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr3B_1838
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------TGTTGTCAGCGCACGTACAGCCAAGT
CAGTCAAAAGCTTCACACCGAGACGCGTAAACGGCCGACCCAAGAGGATCGTGCAGCCCAACGGAAGATTCGTCGGGCCA
GAATGGGCCCGTTGAGCCCGCTCGCCTGACGGCTCGCTACTTAACCCCC-AGGCTACGAAGGGATCGGCATCCAGGCT-G
GATCAGGAAC-GAACGGCGGCTTCCTTCTTCTC-CCC-----ACCTACCTACCTTCCT-CTTCCTCAAGAATAGAGAGAC
CCGAT---TTGTAATTCGAATTCA-GACTTGTAATCGAGAGCTAGTAGTAGATCGACCTGGTACCTAACATCCTGGTATT
AGAGCCCAGCACCACCCTCTC------CGCCGCGTCGA--CCTGGAAACCCGCCGGCGCATCCAAGCGCGGCAAGCCTTC
GTCGCCGCCATGGATCCAGCGCTCAAGGAGTACCTCGACAAGCTCGATCAGGACGCCAAGGCCGACTCCGCCCACGTCCT
CAAGCAGCTGCAGGCGCAGTCCTCG
>chr2A_1840
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------GTGTCAGCGCACGTACCACCAAGG
CGATCGACGGCTTCACCCCGAGACGCGTCGATAGTAGGCCCAAGAGGATCGTGCAGCCCAACAGAAGATTCATCGAGTCG
GAATGGGCCCGCTGAGCCCGCTCACCTAACGGCTCGCTACTTAAACCCA-TGGCGACAGTGGGATCGGCATCCAGGCTAG
GATCA-GGAC-AAACAGCGGCTACTTCCCCTTTCCCCCACCTACCTTCCTCTCTTC----CTTCCCAAGAACATCGAGAC
TGAAT---T-GTGATTCAAATTCGAGACTTGT-ACTGTGAGTTAGTGATAGGTCGATCTGGTGCCTAACATCTTGGTATC
AGAGACCAACACCACTCTCTC------CACCGCGCC-CACCCTGGAAACCCGCTGGTGAATCCAAGCGCGGCAAGCCTTC
ATCACCGCCATGGATCCAGCGCTCAAGGAGTACCTCGACAAGATCCATCAGGATGCCAAGGCCGACTCCGCCCACGTCCT
CAAGCAGCTGCAGGCGTAGTCCTCG
>chrUn_1840
--------------------------------------------------------------------------------
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--------------------------------------------------------GTGTCAGCGCACGTACCACCAAGG
CGATCGACGGCTTCACCCCGAGACGCGTCGATAGTAGGCCCAAGAGGATCGTGCAGCCCAACAGAAGATTCATCGAGTCG
GAATGGGCCCGCTGAGCCCGCTCACCTAACGGCTCGCTACTTAAACCCA-TGGCGACAGTGGGATCGGCATCCAGGCTAG
GATCA-GGAC-AAACAGCGGCTACTTCCCCTTTCCCCCACCTACCTTCCTCTCTTC----CTTCCCAAGAACATCGAGAC
TGAAT---T-GTGATTCAAATTCGAGACTTGT-ACTGTGAGTTAGTGATAGGTCGATCTGGTGCCTAACATCTTGGTATC
AGAGACCAACACCACTCTCTC------CACCGCGCC-CACCCTGGAAACCCGCTGGTGAATCCAAGCGCGGCAAGCCTTC
ATCACCGCCATGGATCCAGCGCTCAAGGAGTACCTCGACAAGATCCATCAGGATGCCAAGGCCGACTCCGCCCACGTCCT
CAAGCAGCTGCAGGCGTAGTCCTCG
>chrUn_1840
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------GTGTCAGCGCACGTACCACCAAGG
CGATCGACGGCTTCACCCCGAGACGCGTCGATAGTAGGCCCAAGAGGATCGTGCAGCCCAACAGAAGATTCATCGAGTCG
GAATGGGCCCGCTGAGCCCGCTCACCTAACGGCTCGCTACTTAAACCCA-TGGCGACAGTGGGATCGGCATCCAGGCTAG
GATCA-GGAC-AAACAGCGGCTACTTCCCCTTTCCCCCACCTACCTTCCTCTCTTC----CTTCCCAAGAACATCGAGAC
TGAAT---T-GTGATTCAAATTCGAGACTTGT-ACTGTGAGTTAGTGATAGGTCGATCTGGTGCCTAACATCTTGGTATC
AGAGACCAACACCACTCTCTC------CACCGCGCC-CACCCTGGAAACCCGCTGGTGAATCCAAGCGCGGCAAGCCTTC
ATCACCGCCATGGATCCAGCGCTCAAGGAGTACCTCGACAAGATCCATCAGGATGCCAAGGCCGACTCCGCCCACGTCCT
CAAGCAGCTGCAGGCGTAGTCCTCG
>chr1A_1840
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------GTGTCAGCGCACGTACAGCCAAGG
CAGTCGAAGGCCTCACACCGAGGTGCGTCAATAGCCGGCCCAAGAGGATCATGCTGCCCAACAGAAGATTCGTCGGGCCA
GAATGGGCCCGTTGAGCCTGCTCACCTAGTAGCTCGCTACTTAACCCAT-AGGCGACGAGGGGATCGGCATTCGGGGT-G
GATCA-AAAC-GAACGGCGGCTTCCTCCTCTTT-CCCCACCTACCTACCTTTCTTC----ATTCTCAAGAACAGAGAGAC
TCGAT---TTGTAATTCGAATTCG-GGCTTGT-ATCGTGAACTAGTAGTAGATCGACTTGGTACCTAACATCCTGGCATC
AGAGACCAGCACCACCCTCTC----TCCGTCGCATCGA--CCTGGAAACCCGCCAGCGCATCCAAGCGCGGCAAGCCTTC
GTCGCCGCCATGGATCCAGCGCTCAAGGAGTACCTCGACAAGCTCCATCAAGACGCCAAGGCCGACTCCGCCCACGTCCT
CAAGCAGCTGCAGGCGCAGTCCTC-
>chr5B_1841
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------TGTCAGCGCACGTACCACCAAGG
CGATCACCGGCTTCACCCCGAGGCGCATTGACAGCAGGCCCAAGAGGATCGTGCAGCCCAACCAAAGATTTGTTGGGCCG
GAATGGGCTCGCTGAGCCTGCTCGCCTGGGGGCTCGCTACTTAAGGCCACAAACGACAGGGAGACATTCATCCAGA--AG
GATCA-GGAC-GGACGGCGGCTTCTTTCCCTTC-CCC-----ACCTACCTTCCTTC----TTCCCCACAAATAGCAAGGC
TGGAT---T-GTAATTCGAATTCGTGAAATAT-ATTGTGAGCTAGTGCTAGATCGATCCGGTACCTAACATCCTGGTATC
AGAGCCCAACACCACTCGCTC----TCCGCCGCGCTGA--CCTGGAAACCCGCCGGAGAATCCAAGCGCGGCAAGCCTTC
GTCGCCGCCATGGATCCAGCGCTCAAGGAGTACCTCGACAAGCTCCATCAGGACGCCAAGGCCGACTCCGCCCACGTCCT
CAAGCAGCTCCAGACACAGTCCT--
>chr2A_1841
--------------------------------------------------------------------------------
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---------------------------------------------------------TGTCAGCGCACGTACATCCAAGG
AGGTCGAAGGCTTCACACCAAGGCGCGTCAACAGCCGGCCCAAGAGGATAGCGCAGCCCAACAGGAGATTCGTCGGGCCA
GAATGGGCCCGTTGAGCCCACTCACCTGGCGGCTCGTTGCTTAACCA-C-AGGCGACGAGAGGATCAACATCGAGGCT-G
GATCA-GAAC-GAACGGCGGCTTCCTCCTCTTT-CCCCACCTACCTATCTTTCTTC----CTCCTCAAGAACAGAGAGAG
AGATTCGATTGTAATTTGAATTCG-GGCTTGT-AACGAGAGCTAATAATAGATCGACCTGGTACCTAACATCCTGGTATC
AGAGACCAACACCACTCCCTC------CGCCGCGTCTAACCCTGGACACCCGCCGGCGAACCCAAGCGCGGCAAGCGTTC
GTCGCCGCCATGGATCCCGCGCTCAAGGAGTACCTCGACAAGCTCCATCAGGACGCCAAGGCCAACTCCGCCCACGTCCT
CAAGCAGCTGCAGGCGCAATCCACG
>chr7A_1841
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---------------------------------------------------------TGTCAGCGCACGTACCGCCAAGG
CAGTCGAAGGCTTCACCCCGAGACGCGTCAACAGCCGGCCCAAGAGGATCGTGCAGCCCAACAGAAGATTCGTCGGGCCA
GAATGGGCCCGCTGAGCCCGCTCGCCTGACGGCTCGCTACTTAAACCCC-GAGCGACGATGGG-TCGGCATCCAGGCT-G
GATCA-GGAC-GGACGGTGGCTTCTTCCCCTTT-CCCCATCTACCTTCCTTTCTTC----CTCCTCAAGAACAGCGAGAC
TTGAT---TTGTAATCTGAATTCGAGACTTGT-ATCCTAAGCTAGCTATAGATCGACCTGGTACCTAACATCCTGGTATC
AGAGACCAACACCACTC-CTC------CGCCGCGTC-AACCCTTGAAACCCGCCGGCGAATCCAAGTGCGGCAAGCCTTC
GTCGCCGCCATGGATCCAGCGCTGAAGGAGTACCACGACAAGCTCCATCAGGACGCCAAGGCCGACTCCGCCCACGTCCT
CAAGCAGCTGCAGGCACAGTCCTCG
>chr4B_1843
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-----------------------------------------------------------TCAGCGCACGTACAGCCAACG
CAGTCGAAGGCTTCACACCGAGACGCGTTAACGGCCGACCTAAGAGGATCGTGCAGCCCAACAGAAGATTCGTCAGGCCA
GAATGGGCCCGTTGAGCCCGCTCGCCTGACGGCTCGCTACTTAACCCTC-AGGCTACGAAGGAATCAGCATCCAGGCT-G
GATCA-GGAATGAACGGCGGCTTCCTTCTTCTC-CCC-----ACCTACCTACTTTCCT-CTTCCTCAAGAACAGAGAGAT
CTGAT---TTGTAATTCGAATTCA-GACTTATAATCGTGAGCTAGTAGTAGATCGACCTGATACCTAACATCCTGGTATC
ATAGACTAGCACCACC--CTC----TCCGTCGCGTCGA--CCTGGAAACCCGCCGGCGCATCCAAGTGCGGCAAGCCTTC
GTCGCCGCCATGGATCCAGCGCTCAAGGAGTACCTCGACAAGCTCCGTCAGGACGCCAAGGCCGACTCCGCCCACGTCCT
CAAGCAGATGCAGGCGCAGTCCTCG
>SNPs
--------S-----S---------S---------------------------------S--S-------------S---S
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S----------S------------------------------------
---------------------------S------S--------------------------------------------S
--------------S------------------------------------------------------SSSSS------
-----------------------------------------S--------------S-----------------------
---------------------------------------------------------------------S----------
---------------------------S-------------S-----------------S--------------------
--SSSS---S----------------S-----------------S--SSS-------------------------SSSSS
-----------S------------------------------------------------S-------------------
SSSSSSSSS-----------------S---S-------------------------------------------------
-----------------------------------------------------------S-------------------S
--S------------------------------------S-----------------------------------S----
------------------------------------S-------------------S-------------------S---
--------S------------------S---------------------------------------S--S--------S
---------SS---------S-----------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------
------S-------------------------------------------------------S-----------------
----------S---------------------------------------------------------------------
-------------------------S----------------------S---------S---------------------
--------------------------------------------------------------------------------
---------------------SSSS---------S----------------S----------------------------
-----------S--S---S-------------------------------------------------------------
--------------S----------
>forward_1039
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-----------------------------------------------------------CCAGCATATACACGGTGGCA-
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>reverse_1857
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----------------TAGGGGCCGTAGTCATTGGA--------------------------------------------
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-------------------------
