>input_sequence_82930
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-ATGGCGCCCACTCGTCGCATGGCCGCATCCGCCCTCC---TGCTGCTGCTCCTCCTCGTCGCCACAGGTACGTTCCCC-
CGCACAGCT--TCACTCTTCCCAGCGAGCCAGCTCTGGTCTGCTCCATGGACGATGCTTAAGTTGCTT-----ACCGTGG
TTCCGTTGACGTGCATGCAGAGATGGGGACGACGAGGACCAAGACGGCGGAGGCGCGGGACTGCCTGTCGCAGAGCCACA
AGTTCAAGGGCGCCTGCCTCAGCAGCAGCAACTGCGCCGGCGTCTGCCGCACCGAGAACTTCCCCGACGGCGAGTGCCAC
ACGCACAACTTCGCCCGCAAGTGCTTCTGCAAGAGGGCCTGCTAG-----------------------------------
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-------------------------------------------------------
>chr1D_1_TraesCS1D01G053000
TAGCCTCTCTGATAAGGTTGAAATCTCCACCCACTAGTGTGTTTAAAACAATTCCAATGTGTATTAAAAATGTTAATCAT
GTATTTGTATTAAAATGTATAGAGCATACTTTAAAAATGTTCCAGTATATTAAAATATGTTCATCGTGTAGCTCATCTTG
CTT-CAAAATAAATGCTCATATTTTAAAAAAAAACATCAACGTATATTTTAAAAGAGTTCAGCGTATTATTTAAAAAAAA
TCATCATGTACTAAAAATCCTAGGTCGGATTTGTAGCTAAGTCCAAGATCATTTGGTTACTTATGATAACCGTTGCTGAC
GGACTCAATCATAC------------------------------------------------------------------
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-------------------------------------CATACGCGGATTCACGCGCCCCATGTATCTGCCTCTGACCTGT
GCTGTGTACGTACGTATGAATCTGCTTCTCATCGCAAGGAGTGACTAGGCGTACAG--------------------CCTT
GATGGCCTTTCCACAGCCACCCACCAGCTTGGATGGTATCCAGCTCTCTAAGCTGTAGGCCGTCGGCTTGCCTGACGAGC
AGCATGTGACCTCGATGATCCCCGGCTCGCTAGAGTCCAACGACGGGCCATTCATCGGTAAAAGGAAATCTGGCCCGTGA
AATGACCACTCCCTCAGTCCTACTCCGCTACTTTCGGAATCGAATGAAGTTATTGGACCTGGGGG-TGGCAACGTGGATT
GGCCCCGC----CCTGCCCTGCTCCTGCTCCTGTGCATGTGCAGTATAGGTGAGCAGCAATTGCATGCTCTGCTCATGTG
GGCAGTACTGTCTAGGTTAGCAGCAATTAAATCCAAAAGAACACTACGTTTGTGTTAAGCCAACGGCTTAAACACCCACA
GTAATCTGCCGTCTGGCTATATA---------------------------------------------------------
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-------------------------------------------------------CCACCAGCCCAGCCCGCTCTTCGCT
TCTCA-------CTCACCGGTGTTCATTCTCCTCCACTCGCTTTCCTATCTAACCTAAC-ACAGGCCCC-----------
--CGTTGCAGCAGCA-GAG-----CAGATCGATCCAGTA---CG-------TCTCGGGTGAACCAGCTGAGCAGA---TC
GATGGCGCCCACTCGTCGCATGGCCGCATCCGCCCTCC---TGCTGCTGCTCCTCCTCGTCGCCACAGGTACGTTCCCC-
CGCACAGCT--TCACTCTTCCCAGCGAGCCAGCTCTGGTCTGCTCCATGGACGATGCTTAAGTTGCTT-----ACCGTGG
TTCCGTTGACGTGCATGCAGAGATGGGGACGACGAGGACCAAGACGGCGGAGGCGCGGGACTGCCTGTCGCAGAGCCACA
AGTTCAAGGGCGCCTGCCTCAGCAGCAGCAACTGCGCCGGCGTCTGCCGCACCGAGAACTTCCCCGACGGCGAGTGCCAC
ACGCACAACTTCGCCCGCAAGTGCTTCTGCAAGAGGGCCTGCTAGCCGGCCTGCTCG----CCCCGGCCGCCCTGCCGGC
CAGCGCCGAGACGTCCGATCTGT-----------------TCGTCAGTGCTGTCTGCTAGATC-----------------
-------------------------------------------------------------------------TGTTCTT
CAGTGCGTTCGCGTTCGTCGGCAGTAGCTGTTCGTGTGACGACTGTGTCCCGTAATAAAGTAGGAAATCAACCGGGCTCT
TGGTAGTTTGGTTCGCCGTCTGCTAGTAGGTCGTGTTTGTTGCTGCTTTGTGTGGTGAACTTGTGATGTAGTAA------
TAAGGTCGTTGTTTCAGCATGGACGTACGTGTGCACTGCATCC-------------------------------------
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--------------------------------------------------CC----------CTCTGTCTCTGTTGGTGT
GATCGGTGTCAAAAACGCTCTTATGACTTATATTATAAGACGGAGGGG---------------GTACATTTTGATGTGAC
CCGACG-TTTTCGAAGCTGCGTGAACATTTCATTTTGTGCACATGAACTAC-----------------------------
----------------------------------------------------------------------------G-AA
AGAATATCTTATGTGTATTCAGATTTTATTAAACCTACTCTACAAATCGTATTTTCTACTTTAGAATAATATATAAAGTT
TGGACACTAAAAAAGAACAC---ATGTGTAGACAAACATTTCCTTGGAAGGACAATCTGGACAGCACATGCCTCCA-GAG
TTCAACCGCATGGAAACAT------TTGGGTAAAGCGCCCTCGATGCTCCTCCAAGTGATAAGGATGCATCGGTGACTCA
TCGTGGGGTCTCAGAGGGCAACAGAGGATGAACACACGTCCATCCAATCGCACACTAAGACCGTGT--GCAATGCAAGAT
GTTTACAC----AGGTACTTGTAAAAC-----------------------------------------------------
------------------------------------------ATAAACCGCCTTTTCTTACGAATCGGTGCTTTTTTTA-
-CGGCATAGCTGCCCAACCAAGTGATAATGCTATGCAAGTAAGC-AACGATGCTTCAAAAAAGACCCCTTCGTTTATACA
AGCACCTCCCTAAGTACATTGCATTGTACATGACCTAATATAGATCGTGAGGGCAGGGAGAGCGATCTGACAACAGA---
-GCAAACCCTCTGTGCCCTCGTAAGTTCCACGTAAGTTCCACGTGCTTCATATGATGTA---------------------
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>chr1A_37
CACCC---------------------------------------------------------------------------
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-----------------------------------------------------------------------------ACA
CTAATCTACCGTCTGCCTATATAAACCCCACTCTTTGC-TCTCACTCGTGTCCATTCTCTCCACTCCATTCGCTTTGCTA
CTAGCTAACACAGCCACCCGTACATAGCACTAGCAGCAGCAGCAGGGCAGCTCCTCAGTCCAGTACGTGAGCAAGATCAG
CAGATCGATGGCGCTCTCTCGTCGCAAGACCGCGTCCGCCCTCCTCCTGCTCTTCCTCCTCGTCGCCACGGGTACATGCC
GCCTCCCATCCTCACTCTTAATTCCCAGCGAGATGTGATCTGTTTCCTGGATGACCCTTAGTTGCTTAATGTGGTTTGGT
TGATGTGCATGCAGAGATGGGGACGACGACGACCAAGCTGGCGGAGGCGCGGGACTGCCTGTCGCAGAGCCACAAGTTCA
AGGGCGCCTGCCTCAGCAGCAGCAACTGCGCCGCCGTCTGCCGCACCGAGAACTTCCCCGAGGGCGATTGCCACACGCCG
CACTTCGCGCGCAAGTGCTTCTGCAAGAGGCCCTGCTAGGCCGCACGCTGGCCCCGCCCTGCCGGCCAGCGCCGAGACGT
CCGATGCTACATCATCCGTGCCGTTAGCTAATAATTAGCTTATATCTGTTCTGTTGGTCGGTGCGTCCAGGTTCGTCAGT
CAGTCGTACTAGTTCTTAACTAGATCATCCGTGCCGTAACTAGTTCTGTTCTGTTCATCGGTGCGTCCCTCTTAATCAGT
AGGACAACTAATAAAGTAGAAAAATCAATCGGGGTCTCTGTAGTTTACTTCGCTGTACGCCGTGTTTATGCCTGATTTGT
GTGTGGTGATGTAATAAATATGTTCGTTGTTTCAGCATGGATGGACTTGTGCAATGCATCCCCCTTTCCCCCCTGTCTCT
GTGTAAGTGTGATCGTGTTCAAAGGCAAATGCTAGTATTATTGCTTGTGACTACTGCATTTTCATGTGACAAGACGTTTT
TGGAAGCTGCATAAAGATTTCATTTGTATACATGAACAACTATAAGTTGAACGTAACCTTGTCAAAAATTTAACGCTAGA
TTGTAGGCCTTTTCTCTATTAAAAAATACCTTGTCAAAAGAAACCAAGTTTTCTTTTGAGAAAGAAAATAACATAGTAGA
GCATTAACATGAGTACAACTTTTCTTTTACTAAAAGAAACAGCTTTATGTGCACTGGGATTTAATTAAACCAGCTGGTCT
ACAAATCACATTTTTCTACCTTTAATAAAAAAATATTACACATGAAAATCAGAAGAAGAAAAAAGATGCATAGACCACCA
TTTCCTTGGAAGAACAATTCCGCAAAAGCCCTCCAGAGTCTAACCGTACAGAGATATTTTGGTAAAGCGCTCTGGATACT
CCTCCTAGTAATAAGGATGTGCCGTTGACTTAGCGTGGGGTAGGAGGATGGATATAAATCCATCCAATCACACACTATAA
GCAGAGACAATGTAAGATTGTAAGATGTTTCAAGAGTTGCTTGAAAAAAATTCTTAAACAACGATACTTTTTTTAGGTGA
CTAAGTAAGCATTTATGCTACACAAATAAATACTGGTGCTTTATAAAAAACAGGTTCATTTTTACAAGCACCTATATAAA
TACTTTGTGTTGCACATGGGCTAGCACACACCACAAGGCAGGCATCATGATCTGCTCACAATTGGGACAAACCTTATGGG
CCCTCATGAGTTACATGTGTCCCATATGCCGAAGTTTTTTTCAGTGGTATACTTTTATATTTTATTTTTTAGACAAAATT
TTATATTCTTTTAAGTTATTGTAGTCATGTGACCCACAATTTTTATTTAGCGCTCATTTTAGAACGACAGGGAGATCATC
CTATTTTTGTGCCTTGTGCTACAAATAGAGCCTATAACACAATATTGACCGTCCCAATAACTCCCGTACCCTCCTCACTC
GCGAAACTATCACAAAAACTATATCTCACTTACGGTGAGTTATTGCAAGTGCTCTCTCAGAGAGCTCTTGATTTGGGTCA
GCCCGCCTAGGAACCGAGGGTGGGGACGGTATTTGCTTAAAGCCTTTTCGCGCGGGTTCTTTTCATGTGGTTTTATTTGG
GAATCGGCTTCTCATCCATTTTAGTGTTTTTCTTGAGGTCTTGCCTTTTTTCTCCTTTTTAGAACTTTTTTCCTGTTTAT
TTGTTATTTATTTTCTGTTCCTTTTTTCTCTTTCCTTTCCTTTCTCTCTTTATTCCCGGTTCTAATTTTTTTGTTCATCA
TCTATTAAAAACAAGTACATCGTCTATTTAAGAAAAAAAATGCATATCTGAACATGCTATCGTGTATTTAAAACAATTCC
AATGTGTATTAAAAATGGTAACCATGTATGTATTAAAATGTATAGAGTGTACTTTAAAAATGTTCCAGTATATTAAAATA
TGTTCATCGTGTAGCCCATCTTGCTTCAAAAATGAATGCTCATATTTAAAAAAACATCAATGAATATTTTAAAAGGGTTC
GGTGTATTATTTAAAAAATCACCATGTACTAAAAATCCTAGGTCAGATTTGTAGCTAAGTCCAAGATCATTTGGTTACTT
ATGATAACCGTAGCTGACGGGCTGGATCATATCATACGCGGATTCACGCACCCTCCCATGCATCTGCTTCTGACATGTGC
ACGTATGAATCTGCTTCTCATCGCATGGAGTGACTAGGCGTACAGTAGGCTCGGTTTGCGTACAGCCTTGATGGCCGCTC
CACAGCCACGCATCGGGTGAAGCTGAGCAGCATGTGACCTCGACGATCCCCGGCTCGCTAGAATCCAACGACGGGCCATT
CATCGGTAAGGAAATCGAGCCCGTGAAATGACCACTCCCTCAGTCCTACTTACTACTACGCTACTTTCGGAATCGAATGA
AGTTATTGGACGTGGGGGGTGGCAACGTGGAATGGCCCCGCCCTGCCCTGCTACTGTGCATATGCATGTGCAGTGTGGGT
GAGCAGCAATTGCATGCTCTGCTCCTGTAGGCTGTACTGGATCTAGGTTAGCAGCAATTATATCCAAAAGGACACTACGC
TTTGTTAAGCCCACGGCTTAAACACCCATTAATCTGCCGTCTGCCTATATAAACCCCACCAGCCCAGCCCACTCTTCGCT
TCTCAGTTCTCACTCACCGCTGTCCATTCTTCTCCATTCGCTTTGCTA---------AC-ACAGTCCCC-----------
--AGTAGCAGCAGCA-GCAGGACAGCTCA--------------G-------TCTCGGGTGA---AGCTGAGCAGA---TC
GATGGCGCTCTCTCGTCGCATGGCTGCGTCCGCCCTCC---TGCTGCTGGTCCTCCTCGTCGCCACAGGTACGCCCCGC-
C--------TCTCACTCATCCCACCCAGCGAGCTGTGGTTTGCTCTTTTA---------------CTT-----ATCGTGG
TTTCGTTGATGTGCATGCAGAGATGGGGGCGACGACGGTCAAGCTGGCTGAGGCGCGGGACTGCCTGTCCCAGAGCCACA
AGTTCAAGGGCGCCTGCCTCAGCAGCAGCAACTGCGCCGCCGTCTGCCGCACCGAGAACTTCCCCGACGGGGAGTGCCAC
ACGCACAACTTCGCCCGCAAGTGCTTCTGCAAGAGGGCCTGCTAGCCCGCCTGCTCGATCGCCCCGGCCGCCCTGCCGGC
CAGCGCCGCCACGTCCGATGCTAGCTAGCTGT----TAGATCGTCCGTGCCTTTTGGTAGATC-----------------
-------------------------------------------------------------------------TGTTCGT
CAGTCCGTTCCCGTTCGTCACTAGTAGCTGTTCGTGTGG---CTGTCTCCCGTAATAAAGTACGAAATCAACCGGGGTCT
CGGTAGTTTGGTTCGCAG--------CACGTCGTGTTTGTCGCTGCTTTGTGTGGTAAT-----------GTAA------
TATGGTCCTTGTTTCAGTATGGACGGACGTGTGCACTGCATCTAAATCTGAGGATGGTTTCATACTTAAACCATACTTGA
ACCATGCCTACATGTATCTCTCAAAACCATACTTAAACCATGCCCGTTTAGTGTCATTTTCAACCCAACCAAAATTAGAT
CCTCTATTTTTTTCACCCAAACAAATTTAAATTAATACATAACCATGGGTTTAAACCCAATACATAACTATGGATTTGCT
TCAATGTATATATGATTGCACAAATCGACATGTTAAGAAGCAAATGACATAAAAAAGGCATAAGTGCATCTGCAACAGTT
TGGGAACAAAGTTATCGTTGAGATACAGTCAACACACAGTAAGAGTTAAAAAGACAATGCCCACGATTGAACAAGTGTAT
TAAAACCAATTGCTTAGTTAAAGCACAAGCAAACACATTCGATTTGCATGTGGTATTTCCCCATAATACAGAATTACATA
GTGCATCGCAGCATGTACGCGGATCAAAGATACTCGTTGTCGATGCGTCCTTACTTATTGCACATAACCAATGCCCAGAA
ACCGGTTTGGATCCATAGTTTATAGCCATTAATAACCAAATTGTTTAAGCCCATAACCAACTATACCCAAATTGGTTTCT
TCACATACCTAAACCAAAACCAAACTAAAAAAGATTCAACCCAATAAAATCTGAACCAATCAAACCCAAAGTAAGAACCG
AACTGTTTCATCCAGTTTTTTAATAACCATTCTCAGGTTTAACTGCATCTCC----------CTCTGTCTCTAC------
----------------------TAAATCAGCATCTTCAAAGAGAACTGCTATTATTGTGACTACCGCATTTTTATCTGAC
GAAATGTGCTTGGATGCTGGGTGAACATTTCATTT-GTACACATGAACAACTAAAAAAGCTAAGTTGTTT----------
-------------------------------------------------------GTACGAACTTTCTTTTATCAGG-AA
AAAATACCTTGTATCTATTCAGATTTTATTAAACTTGCTCTACAAATCGTATTTTCTACTTTCAAATAATATA--AAGTT
TGGACATTAAAAAATAACAC---ATGCGTAGACAACCATTTCCTTGGAAGGACAATCGGGACTGCACAAGCCTCCA-CTG
TTCAACCGTATGGAAACAT------TTGGGTAAAGCGTCCTCGATGCTCCTCCAAGTGATAAGGATACATCGGTGACTCA
TCGTGGGGTCCCAGAGGGCAACAGAGAATGAACGCACGTCCATCCAATCACACACTAAGAACGTGT--ACAATGCAAGCT
GTTTATATATAGAGGTACTTGTAAAAC-----------------------------------------------------
------------------------------------------ATAAACCGTCTTTTCTTATGCATCGGTGCTTTTTTTA-
-TGGCATAGCTGCCCAAGCAAGTGATAATGCTATGCAAGTAATC-AGCGATGCTTCAAAAAAGACCCATTCGTTTTTACA
AGCACCTCCCTAGGTACGTTGCATTGTACATGACCTAACAGAGATCGCGAGGGCAGGCAGAGCGATCTGACAAAAGA---
-ACAAACCCTCTGTGCCCTCATAAGTTCCACGT-----------------------------------------------
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-------------------------------------------------------
>chr1B_38
TGTA-------------------------------------TTTAAAGCAATTCCAATGTGTATTAAAAATGTTAACCAT
GTA--TGTATTAAAATGTATATAGTGTACTTTAAAAATATTCCAGTATATTAAAATATGTTCATCGTGTAGCTCATCTTG
CTTCCAAAAACAATTTTCATATTTAAAAAACCT---TCAACGTATATTTTAAAAGAGTTTAGCGTATTATTTTAAAAAAA
TCACCATGTACTGAAAATCCTAGGTCAGATTTGTAGCTAAATCCAAGATCATTTGGTTATTTCTGGTAACCGTAGCTGAC
GGGCTGAATCATATCAATTTAGCTATATATCAGTCAGCTGAAAATTTCTTTTTGGGTCAATCAGTTTTGTGGCCATCCGA
TTCTGCTTTAAGATGTGTGCTGTTTTTTTTCTGTGTCATTTTGGTGGTGAGTTAGGCTGTGGGGAATTGATTGACCCCAA
TTTTGGGTCAATCGAATTGCTTCTTTGGCTCATTTTTGCTTTTCCGAGTCGCGCTTTTCTTTTTCCCTTTTTTCTCTATT
GGTTATTTTTTGTTTTGTGCATTTATGGATGAGTGTAATTATCTACATACAAATACTATATAATATGTGCCAAAATTTCA
GGATTATATGATTATTATTTTCATTTTATGATAGAGTGAGATTTCGGTGCAAAGTTGTGCGCAAGTTTTTTTTATTTTCT
CTCTTCTTAAAGGAAATACTAACGCCACTAATTTATTCTTTTTTAGGAAAATCGTTATTTTGATTTTGTTTTAGTCTTTA
CTTCATTTTCATCCCACTTTAAGGTTAATACCACTTCCACTATTCATTTGTTCTTAGATTTTTTTTGCAAAAGTTCCACT
TTTATGTGCTTACTCTTGCATATTTTTAAAAAGTGTAATTTTTATGTATATTTCGTGCAAATTTTGTCAGCGCTTATTAT
TGCCTATTTTTAAAAAGCATAAATGGTAATATCAATGAAACTAATTTATTCTTCCTTAAGAAATTTAATTCTTTCTTTTG
TGGGTATTTTTGCTTTTTTATATTTTATGTTTCTATGCATTCTTATTTTTCCTTTTTTCTTTCCATTATTGGTTATTTTT
TGTTTTTTGTGGTTTTTTGTTGAGTGTAATTGTATATAAACAAATACTATATAATATGTGCCAAAATTTCATGATTATAT
AATTATTTTCGCATATTACGATAAAGTGCAATTTCGGTGCATAGTTGTGTGCAAGTATTTTTCTTTCTTCTTAAAGTAAA
ATAAATTATTTCAGTTACACTATGTGTATATTACAATAGAATTTAAAAAATGCACTATTATATGCTTATTGTTTGCATAT
TTCAAAAAGTGCAATTTCAGTGCAAATTGTGTGCAAGTTTTTAAAGATTTTTTCTTTTTCATTTTCTTTCTTCTTAAAAG
GGCTTCATTCTTTCTTAGAAAACTTCATTATTTGATTTTGTTTTATTTTTCTGTAAGGGTAATACCAATGCCATGAATTC
ATTTTTACATAGAAAACATTATTTATTTTTAATTTATTTTATTTTTCATTTCATTTTCTTATTTTTTAGTTTGCATTTCT
TTTCTTTTGTAAGGGTAATACCAATGTCACTAATCTATTACTTTTTAGAAAACACTTCTTTGCAGAAATCTCACTATAAT
ATACTCATTTTTGCTTTATTATTTCTGTTTTCTGTTTCTATGCGTTTATCTTTTCTTCTTCTTTATTGGTTGTTTTTTTA
GGTGTTTGACTGAGTGTAATTATATACAAAAAATACTATATAATATGGGCCAAAATTTCGTGATTATATTATTATTTTTG
CATTTTGTGATAAAGTGTAATTTTGGTGCAAAATTGTGTGCAAGTTGTTTTTAATTTTCTTTTTCTTAAAGGAAATACAT
TATTTCATTTACACTACGTATAAATTATAGTGGAATGCGACGGATGCACTATTATATTATTCTTTGCATATTTCAGAAAG
TGCAAATTCAGTGCAAGTTTTAAAGGTTTTTCTTTTTCATTGCACATATAGTCACTAATGATTGCATACAACACATTGTG
TTCCCGTTCGGATAATGGCTGTGACGGCTGGTTTTTCTTTGATTAATTAAATGCTAATGGCCGGTGCTTAATGAACTAAA
TGTTGCTCATGAGATTATGCATGCATCGCATGGAAGTGAACCCACGTGAGCAGCACTATAGATCATGCAATCAACCCATA
CATCGCTGTGTCCCTCTATTCCCACTTGAAGCAAATCGACTGAAACAAACTTGGGTCAGTCGACTGACCCAAATTTCATT
TTCAGTTGATTGATCTCTAGCCGGTCCCGAATCATATCATACGCGGATTCACGCGCCCCATGTATCTGCCTCTGACCTGT
GCTGTGTACGTACGTATGAATCTGCTTCTCATCGGAAGGAGTGACTAGGCGTACAGTAGGCTCGGTTTGCGTACAGCCTT
GATGGCCGCTCCACAGCCACCCACCAGTTTGGATGGTATCCAGCTCTCTAAGCTGTAGGCCGTCGGCTTGCCTGACGAGC
AGCATGTGACCTCGATGACCCCC-GCTCGCTAGTGTCCAACGACGGGCCATTCATCGGTAA--GGAAATCCGGCCCGTGA
AATGACCACTCCCTCAGTCCTACTACGCTCCTTTCGGAATCGAATGAAGTTATTGGACCTGGGGGCTGGCAACGTGGATT
GGGCAGTAGTTGCCTGCCCTGCTCCATACTGCATGCATGTGCAGTATGGGTGAGCAGCAGTTGCCTGCTCTGCTCCGGTG
TGCAGTACAG----GGTGAGCAGTGATTAAATCCAGAAGGACACTATGTT--TGTTAATCCCACGACTTAAACACC--CA
CTAATCCGCCGTCTGCCTATATAAACCCCAGCAGCCCAGCT---------------------------------------
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---------TCTCACATCGGTGTCCATTCTCCTCCGTTAGCTTTGCTAGCTAGCTAACACA---GCCCC-----------
--CGTAGCAGCAGCC-------AGTAGCTCACTGGTGTCCACCTCTAGGCCTCTCGGGTGA---ACCAGAGCAGA---TC
CATGGCGCCCTCTCGTCGCATGGCCGCATCCGCCCTCC---TGCTGCTGGTCCTCCTCGTCGCCACAGGTACGTTCCCC-
CGCACAGCC--TCACTCTTCCCAGCGAGC---------TTCATTCCCTCGACGATGCTT-AGTTGCTT-----ACCGTGG
TCTCGTTGGTGTGCATGCAGAGATCGGGGCGACGAGGACCAAGGTGGCGGAGGCGCGGGACTGCCTGTCGCAGAGCCACA
AGTTCAAGGGCGCGTGTCTCAGCAGCAGCAACTGCGCCGGCGTGTGCCGCACCGAGAACTTCCCCGACGGCGAGTGCCAC
ACGCACAACTTCGCGCGCAAGTGCTTCTGCAAGAGGGCCTGCTAGCCCGCCTGCTCGA------------CCCGGCCGGC
CACCGCCGCCTCGTCCCATGGTAGCTACCCAGCCACTAGATCGTCCGTGCCGTCTGCTAGATC-----------------
-------------------------------------------------------------------------TGTTCGT
CAGTGCGTTCCGGTTCGTCAGTAGTAGCTGTTCGTGTGT---CTGTGTGCCGTAATAAAGTAGGAAATCAACCGGGGTCT
CGGTAGTTTGGTTCGCCG--------CACGTCGCGTTTGTGTCTGCTTTGTGTGGTAAT-----------GTAA------
T-----CGTTGTTTCAGCACGGACGGACGTGTGCAATGCATTC-------------------------------------
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--------------------------------------------------CC----------CTCTGTCTCTGTCAGTGT
GATCGGTTGTTTTGTGTGTTATTAAATCAGCATCTACAAAGAGAACTGCTGTTATTGTGACTAGTGCATTTTTATCTGAC
GAGATGTTTTTCGAAGCTGCGTGAACATTTCATTT-GAACACATGACCAACTAAAAAAGGCAAGTTG-------------
----------------TTTGCCAAAGAAAATAAACTAAGAACTCATGGACTATGAGTACAAACTTTCTTTTATCACGAAA
AGAATGTCTTATGTGTATTCAGATTTTATTGAACCTGCTCTACAAATCGTATTTTCTACTTTCAAAGCATATA--AAGCT
GGGACATTAAAAAATAACAC---ATGCGTAGACAACCATTTCCCTGGAAGAACAATCTGGACTGCACAAGCCTCCAAGAG
TCCAACCGTATGGAAACAT------TTGGGCAAAGCGCCCTCGATGCTCCTTCAAATGGGC-------------------
--------TCCCAGAGGGCAACATAGGATGAACACACGTCCATCCAATC--ACACTCTGATCGTGT--ATAACGGAAGAT
GTTTAGAG----AGGTACTCCCTTCGTCCGAAAATACTTGTCATCAAAATGAATAAAAAAGATGTATCTAAAACTAAAAT
ACATCTAGATACATCCCCTTTTATCCGAAAATACTTGTAGAAATAAACCGCCTTTTCTTACGCATCGTTGCTTTTTTTTT
CTGGCATAGCTGCCCAAGCAAGTGATAATGCTATGCAAGTAAGCAAACGATACTTCAAACAAGACCCGTTCG-TTTTACA
AGCACCTCCCTAAGTACGTTGCATTGTACATGACCTAACAGAGATCGCGAGGGCAGGCAGAGCCATTTGACAAAAGA---
-ACAAACCCTCTATGCCCTCATAAGTTCCACGT-----------------------------------------------
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>chr1B_38
CTCAC---------------------------------------------------------------------------
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---------------------------------------------TCGTGTCCAGTCTCTCCACTCCATTCGCTTTGCTA
CTAGCTAACACAGCCCCCCGAACG--------------------------------------------------------
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--CGTAGCAGCAGCAGGAGGGTAGCTCCTCAGTCCAGTA---CG-------TCTCAGGTGAGCAAGATCAGCAGA---TC
GGTGGCGCTCTCTCGTCGCATGACCGCGTCCGCCCTCC---TCCTGCTCTTCCTCCTCGTCGCCACAGGTACGTCGCTCA
CGCCGAACC--TCACTCTTCTAAGCGAGCCG--TGTGATCTATTTCCTGGATGAC---------GCTT-----ACCATGG
TCTCGTTGATGTGCATGCAGAGATGGGGGCGACGATGACCAAGGTGGCGGAGGCGCGGGACTGCCTGTCGCAGAGCCACA
ACTTCAAGGGCGCGTGCCTCAGCAGCAGCAACTGCGCCGCCGTCTGCCACACGGAGAACTTCCCAGACGGCGAGTGCCAC
ACGCCGCACTTCGCGCGCAAGTGCTTCTGCAAGAGGCCCTGCTAGACCGCCTGCTGG-----CC---CCGCCCTGCCGGC
CAGCGCCGAGACCTCTGATG---------------CTAGATCATCCGTGCCGTGAGCTTATACTGTCTGTTCTGTTGGTC
GGTGCATCCATGTTTCGTCAGTCGTTCTTCTTAACGAGACTACTAGATCATCCGTCCGTAACAAGTTCTATGTTGTTCCT
CGGTGTGTCCCGCTTAGTAGAAC-----------------------------TAATAAACTAGAAAATCAATCAGGGTCT
CGGTAGTTTACTACGCTG--------TACGTCGTGTTTGTGCCTGATTTGCGCGTG------GTGATGTACTAAATATGG
T-----CGTTGTTTCGGCATGGGTGAACATGTGCAGTGCATCC-------------------------------------
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--------------------------------------------------CTCTCTCCCCCTCTCTCTCTTTGTAAGTGT
GATCGTGTGTTCGG-------------------------AGAGAAATGTTATTGTTGTGACTACTGCATTTTTATGCGCC
AAGACGTTTTCCGAAGCTGCATAAGCATTTCATTT-GTATACATGAACAACTATAAGTTGAGCATTACCTTCTAAAAAGG
AAACAAAGTTTTCCTTTTTGCGAAAGGAAATAACAAATAGAGTATTAAC--ATGAGTACAAAATTTCTTTTAGTC--AAA
AAACTGTCTTATGTGAAAAAAAAA-----------------------------TTCTACTTTTTATAAAAAAA--AATAT
TAAATACAAACGTCGAGAGAAATATGCATAGACCACCATTTCCTTGGAAGAACAATT----CTTCAGAAGCCTCTA-GAG
TCTAACCATATAGATACACATACACTTTGGTAAAGCGATTCGGA---TACTCCTAGTAATAAGGATGTGCCAGTGACTTG
GCGCGGGTCCGGGAGCAACAG--GAGGATGGATATAAATCCATTCAATC--ACACACTGTAAGCATAGACAATGTAAGAT
GTTTCGAA----AGTTGCTTAAAAAAACATTTTTTCCTAAACACAGATACTCTTTT------------------------
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------TAGGTGACTAAATAAGCATTTATGCTAGACAAGTAAGT-ACCGGTAATTCGG----------TTCATTTTTACT
AGCACCTCTCTAAACACTTTGTGTTGCACACGGGATAACACACACCACAA-GGCAGGCAGTGCGATCTGCTCACAACTGG
GACAAACCTTATGGGCCCTCATCAGTTTCATCTGCCCCATATGTCGAATCTGCCTAATTTTATGTACCTTTTTTTAGTGG
TATACTTTTAGATTGTCTCATGACCCATAATTTTTGTTTAGCGCACATTGTAGAACGACAGGGAGCTCCTCCTTTTTTGG
TGCCTTGTGCTACAAATAGAGCCTATAACACAGTACTGGCCGACCCAATAACTCCCGTACCCTCCTCACTCGCGAAAGTA
TCACAAAAGCTATATCTCACTTGCGGTGAGCTATAGCAAGTGCTCTCTCGGAGAGCTCCTGATTTGGGTCAGCCCAGTAA
CCGAGGGAGGGGATGGTATTTGCTTAAAGCCTTTTCGCATTGGTTCTTTTCATGCAGTTTTATTTGGGAATCGGCTTGTC
GTCCATTTTAATGTTTTTCTTGTTTATTCGTTATTTTTTCTCCTTTTTAGAATTTGTTCTTGTTTATTTGTTATTTTTTT
ATCTTTCCTTTCTTTTTTCTCTTTATTCCTGGTCCTAATTTTTTGTTCATCATCTATTAGAAACAAGTGCATCATCTATT
TATGAAAAAAATGCATATCTGAACATGCTCTCATGTATTTAAAGCAATTCCAATGTGTATTAAAAATGTTAACCATGTAT
GTATTAAAATGTATATATTGTACTTTAAAAATATTCCAGTACATTAAAATATGAAAAAAATTCATATTTAAAAATACATC
AACGTATATTTTAAAAGAGTTCAGCGTATTATTTAAAAAAAATCACCATGTACTGAAAATCCTAGGTCAGATTTGTAGCT
AAATCCAAGATCATTTGGTTACTTCTGGTAACCGTAGCTGATGGGCTGAATCATA
>chr1B_773
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---------------------AGCAATTAAATTCAGAAGAACACTACGTC--TGTTAAGCCCACAAATTAAACACC--CA
CTAATCTGCCATCTGCCTATATAAACCCCACAGCCAGCTATGGG------------------------------------
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---------------------------------------------------------------CCAGCACACTCTGCTT-
------------CTCACTGATGCCCATTCTCCTCCATTCGCTTTGCTAGCCAGCTAACACA---GTCCCCCATAGGCCCG
TACGTAGCAGCTGCA-GGA-----TAGCTAGGTCCAGTACGTCG-------TCTCGGGTGA---GCTAGAGCAGA---TC
GATGGCACTCTCTCGTCGCATGGCCGCGTCCGCCCTCC---TCCTGCTGGTCCTCCTCGTCGCCACAGGTACGCCCCGC-
CGTCCAGCCTCTCACTCTTCCCACCGAGCGAGCTGTGGTTTGCTCCATGGATGAC---------GTTTTACTTGCTGTGG
TTTCTTTGATGTGCATGCAGAGATGGGGGCGACGACGACCAAGGTGGCGGAGGCGCGGGACTGCCTGTCGCAGAGCTTCA
AGTTCAAGGGCGCGTGCCTCAGCAGCAGCAACTGCGCCGCCGTCTGCCACACCGAGAACTTCCCCGACGGCGAGTGCCAC
AGGCAGCACTTGGAGCTCAAGTGCTTCTGCAAGAGGCCCTGCTAGTCCGCCCCCTCG-----CC---CAGCCCTGCCGGC
CAGCGCCGAGACGTCCGAT-------------------------------------------------------------
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>chr1D_822
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----------------------------------------------------------------------AACACCCACA
CTAATCTGCCGTCTGCCTATATAAACCCCACTCTTTGCTTCTCACTCGTGTCCACTCTCTCCACTCCATTCGCTTTGCTA
CTAGCTAACAGC--------------------------------------------------------------------
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-----AGCAGCAGCAGCAGGGTAGCTCCTCAGTCCAGTA---CG-------TCTCGGGTGA---ACAAGATCAGCAGGTC
GATGGCGCTCTCTCGTCGCATGACCGCGTCCGCCCTCC---T---GCTCTTCCTCCTCGTCGCCACAGGTACGTCCCGC-
CGCCCAGAC--TCACTCTTCCCAGCTTC----CTCTGGTTCATTCCCACGACGATGCTT-AGTTGCTT-----ACCGTGG
TTTGGTTGACGTGCATGCAGAGATGGGGACGACGACGGTCAAGGTGGCGGAGGCGCGGAACTGCCTGTCGCAGAGCCACA
ACTTCAAGGGCGCGTGCCTCAGTAGCAGCAACTGCGCCGCCGTCTGCCGCACGGAGAACTTCCCCGACGGCGAGTGCCAC
GCGCCGCACTACGAGCGCAAGTGCTTCTGCAAGAGGCCCTGCTAGGCCGCTCGCTCG-----TC---CCGCCCTGCTGGC
CAGCGCCGAGAC--------------------------------------------------------------------
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>chr1D_885
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------------CTCACTGGTGCCCATTCTCCTCCATTCGCTTTGCTCGCTAGACAACAGACAGTCCCC-----------
--CGTAGCAGCAGCA-GAGGATAGTAGCTCGGTCCAGTA---CG-------TCTCGGGTGA---AGCAGAGCAGA---TC
GATGGCGCTCTCTCGTCGCATGGCCGCCTCCACCCTCCTGCT---GCTCGTCCTCCTCGTCGCCACAGGTACGCCCCAC-
CGCCCAGCCTCTCACTTTTCCCACCGAGCGAGCTGTGGTTTGCTCTATGGATGAT---------GTTTTACTTACTGTGG
TTTCTTTGATGTGCATGCAGAGATGGGGGCGACGACGACCAAGGTGGCGGAGGCACGGGACTGCCTGTCGCAGAGCTTCA
AGTTCAAGGGCGCGTGCCTCAGCAGCAGCAACTGCGCCGGCGTGTGCCGCACCGAGAACTTCCCCGACGGCGAGTGCCAC
AGGCAGCACTTGGAGCGCAAGTGCTTCTGCAAGAAGCCCTGCTAGTCCGCCCGCTCG----CCC---CTCCCCAGCCGGC
CAGCGCCGAGACGTCCGAT-------------------------------------------------------------
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-------------------------------------------------------
>SNPs
--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S----------------------------S---
---SS----------------S--SS------------S-----------------------------------------
---------SS---SS--------S-----SSSSSS-----------------------S------------S-------
---S--------S-------------S-------------S------------------S--S--S-------S------
--S--S-------S------------------------------------------------------------------
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----------------------------------S---------------------------------------------
-------SS------------------S----------------------------------------------------
------------------S----S---------S---------------------------SS-------S---------
------------------------S----S--------------------------------------------------
--S-SSSS-----------------SSSSSSSS--------------S-----------S----S----------SS---
S-------S-SSSS---S-----------------S--------------SS---------S---S--------------
S--------------S----------------------------------------------------------------
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----------------------------------------------------------------------S---------
-----------------------S------------S-------S---S---S--S------------------------
-----S---------------------S---S-----------------------------S-S----------------
----------S--------------------------------------S------------------------------
--------S--------------------------------------------------S--------------------
--S----------------------------------------SS-----------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
-------------------SSSS----------------------S----S-----------------------------
------------------------------------------------------------------------------S-
----------S----------S----------------SSSS----------------------------------S---
S-----------------SSSSSSSS--S-----------S---------------S-SSSS------------------
--S----------------------S------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------SS----
-------SSSSSSSSSSS-SS-SSS-SSSSS--SS-S-S-SS--SSS------------------S------S-------
SS---------------------------------S--S---------S-------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------SS---------SS-----
--------------------------S--------S--------------------------S-----S-----------
--------S-----------------------------------------------------------------------
----------S--------------------------------------S----------S-------S-----------
-----S-S------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-S---------------S-------------------------------------------------S-------S----
-----------------S--------------------S-S------S---------S----------------------
-S------------------S------------SSSSSSS-S--SSSSSS-SSSSSS-S---------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>forward_2811
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-----------------------------------------------------------------------GCTCATGTG
GGCAGTACTGT---------------------------------------------------------------------
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>reverse_8063
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--------------------------------------------------------------AGCACATGCCTCCAGAGT
TC------------------------------------------------------------------------------
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-------------------------------------------------------
