>input_sequence_82921
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--------------------------------------------------------------ATGAGAACCAACCTCCTC
CTTGTGGCCATTGCCACCATCGTCCATGTCGTTGCTACGCCAACCACAGCAATCCCCGGGGGCTGGTTTAAGATCAAGAA
CATCGCTGACCCGCACATCCAGGAGCTTGGCAAGTGGGCAGTATTGGAGCACACCCAACTAGGGG-----GCAATGATGG
GCTCAGGTTTGTGAAGGTGGTGAGCGGCGAGGAGCAGATTGTGAATGGTGTAAACTATCGGCTTGTCATTGATGCCTTGA
GGCTCGATGGCTCACACGGTACATACAAGGCAGTGTTGTTCGAGAAGGACTCGAGTAACCCAAAGACACGGAAGTTCATA
TCTTTCACCCCTGCAAATTGA-----------------------------------------------------------
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>chr7B_1_TraesCS7B01G241000
TAATCCTTCGATGGCGGGGCTGCAATCGGTAGGCGGGAGGCTAC-AACGACGATTGGGAAACTACAAGGGAACATTTGCT
GCTACCAGTGACGGCGGTGAGCCTGCGCACCAGGGGAGGGGCGAGGTGCTGATGGCTGAGTGCGGGGCGAGTGGTGATGA
GGCAGAGTTGCGAGGGGCGTTTTGTTGTGACTCTGTGTTGTGCTGCTCCTAATCTATCTCGCGCACTACCTAGAGGAAGA
GAGGGAATGATGGGTGTCCATACAGAAGATAAGGATAAGATCTAGACGGTTAATAATGAGCTAATA--------------
--ATACAACAAGCATGTGCCCGGCATGAACCCTGACCGATCGCCCGACAAGTAGCTTTTTGATATTGCTTA--CATTCCT
CATGGAAGTCAGCATTCTTGTTTCTCTC-TTATTATTTTTCTATTGCTCCCTTCTGAACTTCCCTTTGTACTTTTCTCAT
ATATACATGAAAACACAAAAATGTACGTTGTATGAAATTCCTATTGTTTTCGGTCAATAAAAACAATTCACTAATCACCC
CTTTAACTAGGCTATCATGTATGAAATGTGGGTAATCAGCATTT-TATCATTGATCACCTTGTAAATCCAACATTTTTAC
-ACAGATCTTATATGGCTATGAGAGTAGGTGTCCTATAACAGTATGGAAATATATACATTAATTTGGTAAGCAGTTATTG
TATTATAAGATATGCATCACTTTGATTAGTATACAGATATAGTATCATATGATAGGCATCACATTAATTGGTATACAAAT
ATAGTATCATATGATATGCATCAAATTAATATTCTTCAAAAAAGAAATATTGCATCACATAAAGATATGTAATTGGTTCT
TGCCCCCTACTGCTACCAAGCTCAAGCCAATATATATAATGTCATCTTCTTTGCTCATCAGCACAACCATTGCAAGCCTC
ATCTTAAACTTCACAAAGCCCATCAATTGATCCAAGGCCAGATAGCAACAACCCCCAAAACCATGAGAACCAACCTCCTC
CTTGTGGCCATTGCCACCATCGTCCATGTCGTTGCTACGCCAACCACAGCAATCCCCGGGGGCTGGTTTAAGATCAAGAA
CATCGCTGACCCGCACATCCAGGAGCTTGGCAAGTGGGCAGTATTGGAGCACACCCAACTAGGGG-----GCAATGATGG
GCTCAGGTTTGTGAAGGTGGTGAGCGGCGAGGAGCAGATTGTGAATGGTGTAAACTATCGGCTTGTCATTGATGCCTTGA
GGCTCGATGGCTCACACGGTACATACAAGGCAGTGTTGTTCGAGAAGGACTCGAGTAACCCAAAGACACGGAAGTTCATA
TCTTTCACCCCTGCAAATTGACGGTTGCCGATCTGATGATATTTAGACTAGCCGTATTATTTTGAATGTAATAAGAAATG
TCAAGGAATTGATGTTCTATTTCT-----ACAGATTAT-GAAATTATTCATCATTGGCAACTCACATCGTTTTACCTTTT
TTAGGCGATAACGGGGAGCATGCATGTTGTCACTTGAACTCATTGCTATAACAAACAATAGCATATATAACTACATTACA
TGGTCCCTTCACAAAGATGGCACAACATTCTATTCTT-ATGAATGGTTGTGAAATGTGCACCTTCGCCATAAAGTTAAGA
AACACAAGATGGCCCTAAAAAAGAGACTAGATGGCGTTTCACTTTAAGATAACTATTGTGGTCGTTGCTCTTCTTGCTAT
TTATGTCCTTTTGTCTTGGTGTTGGTATATGTGATTGTGTATCCTCGTTGTTTTGTCACCATGTTGTTGCAGAAGTCGGG
-TTTATTAATTTCTATTAATTTGATGATTTCATAAAATTTATTTCTCCAAAAGAATTGCATCTCAGACCATGTTTGCATA
AAATCATGTAAACCGGTTGTCCTTTGAAATCTCTCAGAGAAATTGGACAAATGTCACCAAAATATTAGAAGATACTAGAC
ATGTTGCTCATAAAACATTAAGCCCTTATGCATTTTCGATTTTTGAATGATTTACATATCATACTCATGTGATCGGTAAG
ATGTGCATGTTTGCACAAAGGGGAACTAGAGGCTCCACGGCTACTGCCGGTGCTTAGCTAGGGCCAATCTGGACTGCTAT
TTTTATCCACTGTAAACAAAATTGTTATTTTTATTTTTGCACGAAGGGCGGCCCTTGTTAACCAAGGGGCAACCCCCACG
CATTATATTGGGGCGGCCCATGTATGATATTGTCTCTTCTGATTCTGGAAGTTTTAGAAAGGTTTCGATTGTATTTTTTC
CTTTTCATTTACCTTTTAGTTTTAGAAAAGTTTGTGGCGGTTTTCTTTCAAGTTATTATTATTATTTCC
>chr7A_1
TAATCCTTCGGTGGCGGAGCTGCAATCGGCAGACAGGAGGCTACAAATGACGATTAGGAAGCTACAAGGGAACATTTGTT
GCTACCAGCGACGATAGTGATCCTGCGTGCTAGGGGAGGGGCGAAGCGCTGAGTGT-------GGGGCGAGTGGTGATGA
GGCAGAGTTGCGAGGGGCGTTGTC--GCGTCTCTGTGTCATGCTGCTCATAATCTATCTCGCGCGCTGCCGAGAGGAAGA
TAGGGAATGATGGGTGTGCGTAGAGAACATACAGATAGGATCTAGACGGTTAATAATGGGCTAATA--------------
--CTACGACAAGCATGTGCCCAACATGAACCCTGATCGGTCGCCCGACATGTAGCTTTTTGATAGTGCTTA--CATTCCT
CATGGAAGTCAGCATTCTTGTTTCTCTCTTTATTATTTTTATATTGCTCCCTTCTGAACTTCTCTTTGTACTTTTCTCAT
ATACACATGAAAACACAAAAATGTATGTTGTACGAAATTCCTACTGTTGTT-GTCAATAAAAACAAATCACTAGTCACCC
CTTTAACTAGGCTATCATGTATGAACTGTGGGTAATTAGCATTTATACCATTGATCACCTTGTAAATCTAACATTTTTTA
TACATATCTTATATGGCTACGAGAGTAGGTGTCCTAAAACAGTACGGAAATGTATACATTAATTTGGTATGTAGTTATTG
TGTTATATGATATGCATCACTTTGATTAGTATACAGATATAGTATCATATGATATGCATCACATTAATTGGTATACAAAT
ATAGTATCATATGATATGCATCAAATTAATATTCTTCAAAAAAGAAAAATTGCATCACATAAAGATATGTAATTGATTCC
TGCCCCTTGCTAAT---AAGCTCAAGCCAACATATATAGTGTCGTCTTCTTTGCCTATCAGCACAACCATTGCAAGCCTC
ATCTTAAACTTCACAAATCCCATCGATTGATCCAAGGCCAGATAGCAACAACCCCCAAAACCATGAGAACCAGCCTCCTC
CTTGTGGCCATTGCCACCATCGTCCATGTCATTGTTATGCCAACCACAGCAATCCCCGGGGGCTGGTTTAAGATCAAGAA
CATCGCCGACCCGCACATCCAAGAGCTTGGCAAGTGGGCAGTACTGGAGTACACCCAACTGGGGG-----GCAATGATGG
GCTCAGGTTTGTGAAGGTGGTGAGTGGCGATGAGCAGATTGTGAAGGGTGTAAACTATCGGCTCGTCATTGACGCCTTGA
GACTCGATGGCTCACACGGTACATACAAGGCAGTGTTGTTCGAGAAGGACTCGAGTAACCCAAAGACATGGAAGTTCATA
TCGTTCACCCCTGCAAATTGAGCGTTGCCGATCCGATGATATTTAGACTAGCCATATTATTCTAATTGTAATAAGAAATG
TCAAGGGATTGGTGTTTTGTTCTACCTA-ACAGATTATGGAAACTATTCATCATTGGCAACTCGCAATGTTTTAA-TTTT
TTAGACGATTACGGGGAGCATGGATGTTGTCACTTGAACTCATTGCTATAACAAACAATAGCATATATAAGTTATGAAAC
AC-----------AAGATGGCACAACAATCTATTCTTTATGAATGGTTGTGAAATGTGCACCTTGGTCATGAAGTTAAGA
AACACAAGATGGACATTAAAAAGAGACTAGATGGCATTTCACTTTAAGATAACTATTGTGGTCGTTGTTCTTCTTGCTAT
TTATGTCCTTTTGTCTTGGTGTTGGTATATGTGACTATGTATCCGCGTTGTTTTGTCACTGTGTTGTTGCAGCAGTCATG
C-TTATTAATTTCTATTAGTTTGATGATTTCATAACATTTATTTCTCCAAAAGAATTGCATCTCATACCATGTTTGCATA
AAATCATTTAAACCGGTTGTCCTTTGAAATTTCTCAGAGAAATTGGACAAATGTCACCAAAATATTAGAAGATACTAGAC
ATGTTGCTCATAAAACATTGAGCCCTAATGCATTTTCTATTTTTGAATGATTTACATATCATACTCATGTGATTCGTAAG
ATGTGCATGTTTGCACAAAGGGGAACTAGAGGCTCCACGACCACTGCTGGTGCTTAGCTAGG-CCAATCTGGATTGCTAT
TTTTAT--------------------------------------------------------------------------
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>chr7D_1
TAATCCTTCGGTGGCGGGGCTGCAATCGGTAGGCGGGAGGCTACAAACGACGATTGGGAAGCTACAAGGTAACATTTGTT
GCTACCAGTGACGGCGGTGAGTCTGACGCCAGG----GGGGCGAGGTGCTGACTGCTGAGTGCGGGGCGAGTGGTGATGA
GGCAGAGTTGCGAGGGGCATTGCC--GTGTCTCTGTGTCATGCTGCTCCTAATCTATCTTGCGCACAGTCGTGAGGAAGA
GAGGGAATGATGGGTGTCCGTACAGAAGATAAGGATAAGATCTACTCCCTCCGTTCCAAAATAGATGACCCAACTTTGTA
CTATACAACAAGCATGTGCCCGACATGAACCCTGACCGGTCGCCCGACAAGTAGCTTTTTGATATTGCTTATACATTCCT
CATGAAAGTCATTATTCTTGTTTCTCTCT-TATTATTTTTCTATTGCTCCCTTCCAAACTTCTCTTTGTAATTTTCTCAT
ATATACATGAAAACACAAAAATGTCCGTTGTACGAAATTCCTATTGTTTTCGGTCAATAAAAAC-ATTCACTAATCACCC
CTTTAACTAGGCTATCATGTATGAACTGTGGGTAGTCAACATTTATATCATTGATCACCTTGTAAATCCAACATTTTTAC
-ACAGATATTATATGGCTATGAGAGTAGGTGTCCTATAACATCACGAAAATATATACATTAATTTGGTA-----------
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>chr7D_685
GTAT----------------------------------------------------------------------------
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----------------------------------------------------------------------GCAGTTATTG
TACTATATGATATGCATCACTTTGATTAGTATACAGATATAGTATCATATGATAGGCATCACATTAATTGGTATACAAAT
ATAGTATCATATGATATGCATCAAATTAAT-TTCTTCAAAAAAGAAAAATTGCATCACGTAAAGATATGTAATTGATTCT
TGCCCCCTACTGCTACCAAGCTCAAGCCAATATATATAATGTCATCTTCTTTGCCCATTAGCACAACCATTGCAAGCCTC
ATCTTAAACTTCACAAAGCCCATCAATTGATCCAAGGCCAGATAGCAACAACCCCCAAAACCATGAGAACCAGCCTCCTC
CTTGTGGCCATTGCCACCATCGTCCATGTCGTTGCTACGCCAACCACGGCAATCCCCGGGGGCTGGTTTAAGATCAAGAA
CATCGCTGACCCGCACATCCAGGAGCTTGGCAAGTGGGCAGTATTGGAGCACACCTAACTGGGGGGGGGGGCAATGATGG
GCTCAGGTTTGTGAAGGTGGTGAGTGGCGAGGAGCAGATTGTGAATGGTATAAACTATCGGCTCATCATTGATGCCTTGA
GACTGGATGGCTCACACGGTACATACAAGGCAGTGTTGTTCGAGAAGGACTCGAGTAACCCAAAGACACGGAAGTTCATA
TCTTTCACCCCTGCAAATTGAGCGTTGCCGATCTGATGATATTTAGACTAGCCGTATTATTTTGAATGTAATAGGAAATG
TCAAGGAATTGATGTTGTGTTTCTACCTGACAGATTATGGAAATTATTCATCATTGGCAACTCGCAACGTTTTAC-TTTT
TTAGGCGATAACGGGGAGCATGCATGTTGTCACTTGAACTCATTGCTATAACAAACAATAGCATATATAAGTACATTACA
CAGTCCCTTCACAAAGATGGCACAACATTCTATTCTTTATGAATGGTTGTGAAATGTGCACCATCGCTATAAAGTTAAGA
AACACAAGATGGCCCTAAAAAGGAGATTAGATGGCGTTTCACTTTAAGATAACTATTGCGGTCATTGCTCTTCTTGCTAT
TTATGTCCTTTTGTTTTGGTGTTGGTATATGTGACTGTGTAT--------------------------------------
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>chr7D_1765
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--------------------------------------GTATCCTCGTTGTTTTGTCACCATGTTGTTGCAGAAGTCGGG
TTTTATTAATTTCTATTAGTTTGATGATTTCATAAAATTTATTTCTCCAAAAGAATTGCATCTCAGACCATGTTTGCATA
AAATCATGTAAACCGGTTGTCCTTTGAAATCTCTCGGAGAAATTGGACAAATGTCACCAAAATATTAGAAGATACTAGTC
ATGTTGCTCATAAAACATTAAGCCCTTATGCATTTTCGATTTTTGAATGATTTACGTATCATACTCATGTGATCGGTAAG
ATGTGCATGTTTGCACAAAGGGGAACTAGAGGCTCCACGGCCACTGCCGGTGCTTAGCTAGGGCGAATCTGGACTGCTAT
TTTTATCTCCCGCAAAAAAAACTGTTATTTTTATTTTTGCGTGAAGGGCGGTCCTTGTTAACCAAGGGGCAGCCCCCGCG
CGTTATATT-GGGCGGCCCATGTATGATACTGTCTCTTCTGATTCTGGAAGTTTTAGAAAGGTTTCGGTTGTATTTTT-C
CTTTTCCTTTTCCTTTTAGTTTTAGCAAAGTTTGTAGCGGTTTTCTTTCAGGTTTTTATTTTTATT---
>SNPs
----------S-------------------------------------------------S-----------------S-
---------------------------SS-S---------------------SS--------------------------
---------------------S-SSS---S--------SS---------------------------S--S---------
-------------------S------------------------------------------------------------
----------------------S---------------S-----------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------S-----------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------S------------------------S----------
-------S------------------------------------------------------------------------
-----------------------------------------------S---------------------------S----
------------------------------------------------------S-------------------------
------------------------------------------------------------------------S-------
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------------------------------------------------------------S-------------------
------------------------S--------------------------------------S----------------
-S------------------------------------------------------------------------------
---------------------SS---------------------------------------------------------
----------------S-S--------------------------------------------S--S--------S----
----------------------------------------------------------------------S---------
SS------------------------------------------------------------------------------
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----------------------------------S---------------------------------------------
------------------S-------------------------------------------------------------
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-----------------------------------------S--------------------------------------
-------SS-S-S---S----S------------------SS---------S-------------------S-----S--
-S-------S-------------------S-------------------------------------S----------S-
------S---S--------------S---------S--------------S---S-----S-----SSS
>forward_343
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---TACAACAAGCATGTGCCCGG---------------------------------------------------------
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>reverse_2122
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-----------------------------------------TACTGCCGGTGCTTAGCTAG-------------------
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