>input_sequence_82890
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-------------ATGTCTGGCGTGTGGGTGTTCCGCAACGGGGTGGTGAAGCTGGTGGAGAACCACCCCGCGTCGGCGG
----------------CGGGGCCACCGGGAGGCGGGGCGGTCCGGCGCAAGGCGCTACTGCACACGCCCACGGGGGAGGT
GGTCGCCTCCTACGCCTCCCTGGAGCGCAAGCTCGTCGCGCTTGGCTGGGAGCGCTACTACGCCGGCGGGGGCGGCGCCG
CCGGCGACTGTATGCTCAGGTTCCACAAGCGCTCCTCCGTCGACCTCATCTCCCTCCCCAAGGACTTCGGCCAGTTCAGC
TCCGTCCACATGTACGACGTCGTTATCAAGAACCGCGACGCCTTCCGCGTCATCGACGTCTAG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>chr3B_1_TraesCS3B01G489500
AAAGAAGCTCAAATTCCTCCCTCGATGAGGCGATCAACTCTATGGTTGGTGATGGAATTGGGAACTAGTCTATCCAAGCG
GGGATGTTGTGGTGGCGGCGTCATCCTTGTGGCAGACATGTGTACTCGGGCTTCGCTGTTGCGATGACGTCTGCTCCAGC
GCGGACGGGGAGCTTGGGAGATAATCAAGGAGCTGATGTAGATAGTGG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TCT
GTATTAATGACATCTAGAAGACGAATTGTGTAGTGGGTTCGTGGTTGGTGGAAGGCAGGCATAATTTTCTCCTCCGACGT
TGGCGTGACAGA---------------CATGTCCAGGGTGTTGCCCTAGTCTAATTCGTTCAACGGCAATGACTTCGCCT
TTGGTGAGTCACCTTGGAGACCCACAAAGCTGTAAATCAGCGGTGAAGCTACGTCGAGTTCGGATGAGGATGCATGTGAT
CTCTCATTTTTTCCATTGGTGGTTGCTGTGTTGCAGAGGCAGGTGATGGACGTCGATGTCAAGCTCAGGGGACTCTTCCA
CAGTGTTGACTGTAATTTTCTTTCCTGTGATTGATGAATAAATTCCAAAAAAAAAATGCGAGCACCAGCTTCAAGTTTAA
GACTTAAATGACCCTGGTAGGCATAGATACCACTGTACTTCTAACCGTTCTACCGGTTCGCTTCTCATCATTGTTTACTG
GTAGATCTTATCCCTATCCGATAGAAATCTTAACTAGAAAAAACAAATACCAGAGTACATGTATTCGAGCACTGTCTCGC
CCAGAGTGAATAAACACGGCGGGGCCATGCCC-CGTGCGCTCTCGCCATCGAGACGTAACGTACGTATCATGCAGTGCAC
CGCTCGCGGCAATGCACCGGCCGCCTCTATTTATAGCCTCCCACGCCCCATCCTTTTCCACAT--CCCAGCCTCAACAAC
CACCAAAGTACACACACCACACTAATCAAGTACACATCCA------GGCCACCAAGCCACCGAGCGAGCGATCACCATAT
CACACATAGCGCCATGTCTGGCGTGTGGGTGTTCCGCAACGGGGTGGTGAAGCTGGTGGAGAACCACCCCGCGTCGGCGG
----------------CGGGGCCACCGGGAGGCGGGGCGGTCCGGCGCAAGGCGCTACTGCACACGCCCACGGGGGAGGT
GGTCGCCTCCTACGCCTCCCTGGAGCGCAAGCTCGTCGCGCTTGGCTGGGAGCGCTACTACGCCGGCGGGGGCGGCGCCG
CCGGCGACTGTATGCTCAGGTTCCACAAGCGCTCCTCCGTCGACCTCATCTCCCTCCCCAAGGACTTCGGCCAGTTCAGC
TCCGTCCACATGTACGACGTCGTTATCAAGAACCGCGACGCCTTCCGCGTCATCGACGTCTAGCTGAGCTAGCTGGCTGA
TC---CGGCCATTCGAT-GAAGCAAGCACAGCTAGGTCGTGCAAGCCGGCGGCCGCTACCGTCGCATCCATGTCGTCATC
GATCTCCGCTGGTTAACTTTTCCACCTTGTGTACGTGTGTGTATGTGTGTGTACGTAACCTGCACGTATATACGTGTGTA
TGTATATGTACGTTGTGTATTGACGTATATGTAGATATACATGATGCTTGTGCATTGTGGTTGATTAA---TTTGTCTAC
TATAGTACTATTAGGCCATCG-------ATGTGCGGGGACCTTGTGCATCACTTGCCACTTGCTCGTCTTCTTTTGATCA
A--GCTTGTTTGTTATACAACTGCTGCACCCGAGAGCAAACC--------------------------------------
--------------------ACATGTTGTTGTGTCTCATAAGGCAGCATATTA-TTAGTATAAGGTGATGTTTTCGCTGA
TAGCGAGACGTCTACTATGGCTTTGTCAATCTTAAAGCACCACGACTCCGGTTAATGTTGTGTGAGTATGTGCCATTAGT
GGTGG-------------------------------ACTGGTGGTGTATCAGCTATGTTGTGTTGTATTCGGTGTTTCTA
AAAGAAATGTTTGTTTTGTGAATGCTCGTGCAGCTTCTGACCAAATTACATATATGTAAACCTGTTTCAGATAACGCCAT
TTTGCAAAATTGAATTTCGGATGAAAAAAAATAAAAGGTTGACATGGTCCTAGGTTCCTAGTATTGTGCGTCAAAAGAAT
TGTGCGGTGCAACTTTTTGCAGGTTTGAAGAAACCCAAACGCAAGCTCTCCTGTTGGGAGTGATTTTGTTAGTACA----
---------------------------------------------TATAGGCACTTGTTATCAACTGGAATGTCGTTTTC
CATTGATACAGGAATACTCCCTGCGTCCCATAATATAAGAGCGTTTATGACACTACACTAGTGTAAAAGACACACTTATA
TTATGGGACGGAGGGAGTAATACATATTGGTGAGAAGCACAAAGACATCAAGACTAAGATCTTA-CGGTGGTGGGCTAAG
GATTCATCCACCTCAATAG
>chr3D_1
AAAGA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------AGCTC
AAATTCCTTCCTCAACAAGGCGATCAACTGTATGGGTGGTGATGGGTTTGGGAACTAGCCTATCGAAGCGGGGATGTCAT
GGTGGCGAAGGCATCCTTGTGGCGGACTTGTGTACTGTTGCGATGACGTCTGCTCCAGCGCGGACGCGCTGAAGTGGTCT
GCATTAACGACATCTGGAAGATGGATTGTGTCTTGGGTTTGTGGTTGGTGGAAGGCAGGTATGGTTTTCTCCTTCGGCGT
CGGGGTGACAGATTTAGAGTTCGATGGCATGTCTAGGGTGTTGCCCCGGTCAAATTAGTTCAACGACAATGGCTTCGGCT
TTGATGAGTCACCTTGAAGATCCACAAAACTGC--ATCAGTGGTGAAGCTGCATCAAGTTCCGATGAGGAG----GTGAT
CTGTCATTTTCTTTTGTGGTTGTTGTGATGGTGCAGAGGCAGGTGATGGGCATCAGTGTCAAGCTCAGGGGATTTTTTGG
TC---TTGATTGTAATTTTCTTTCCTAGGATTGATGAATAAATTCA-------------GAGCACCAACGTCAAATCTAA
AACTTGAACCCTGATGGGCTAAAA--ATACCAGTGTACTTCTAACCATTCTACCGGTTCGCTTCTCA-CATCGTTTACTG
GTAGATCTTATCTCTATCCGATAGAGATCTTAACTAGAAAAAA--AATACCAGAGTACATATGATCGAGCACTGTCTCGC
CCAGTGTGAATAAACACGGCGGGGCCATGCGCACGTGCGCTCTCGCCATCGAGACGTAACGTACCTATCATGCACTGCAC
CGCTCGCGGCAATGCACCGGCCGCCTCTATTTATAGCCTCCCACGCCCCATCCTTTTCCACAT--CCCAGCCTCAACAAC
CACCAAAGTACACACACCACACTAATCAAGTACACATCCA------GGCCACCAAGGCACCCAGCGAGCGATCACCATAT
CACACATAGCACCATGTCTGGCGTGTGGGTGTTCCGCAACGGCGTGGTGAAGCTGGTGGAGAACCACCCGGCGTCGGCGG
----------------CGGGACCGCCGGGCGGCGGGGCGGTGCGGCGCAAGGCGCTGCTCCACACGCCCACGGGGGAGGT
GGTCGCCTCCTACGCCTCCCTGGAGCGCAAGCTCGTCGCGCTTGGCTGGGAGCGCTACTACGCCGGCGGGGGCGGCGCCG
CCGGCGACTGCATGCTCAGGTTCCACAAGCGCTCCTCCGTCGACCTCATCTCCCTCCCCAAGGACTTCGGCCAGTTCAGC
TCCGTCCACATGTACGACGTCGTTATCAAGAACCGCGACGCCTTCCGCGTCATCGACGTCTAGCCTAGCTGGCTGGCTGA
TGATTCGGCCATTCGATCGAAGCAAGCACAGCTAGCTCGTGCGCGCCGGCGGCCGCCACCGTCGCATCCATGTCGTCATC
GATCTCCGCTGGTTAACTTGTCCACCTTGTGTATGTGTGCGT---------------------ATGTCTATACGTGTGTA
TGTATATGTACGTGGTGTATTGACGTATATATAGATATACATGCTGCGTGTCCATTGTGGTTAATTAA---TT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------
>chr3A_204
CTCATCATTGTTTACTGGTAGAACTTATCTCTATCCGATAGAGATCTTAACTAGAGAAAAATACTTGAGTACTTATATTC
GATCGAGCAATCTCTCGCTCAGAGTGAATAAACACGGCGGGGCCATGCGCCCGTGGGCTCTCGCCATCAAGACGATGCAC
GTATCATGCAGTGCACCGCTCACAGCAATGACTGACCGCAGTATAGATGCAGACGCTCATAAGCCACGTGTAAAGCGTTT
TCCTCTCTGGTGCCAGGTGACTAGAATACTAGCCGCTGTTAGGAGAGGCCAATCTTTCGGCACCGTCCTTTGGTGGCTCC
CGTCGGCCGACAACCTCGCAGTCGTCGATGGTCAAGGGGGTCGCCTGATCCCGTGCGCCCGGATCATGTAGCTTTAGGTT
TTAGGGGCTTAGTGGCTTAGATTTTGGGTCATTCGACATCTTGGCTTCGGCGGTGGCAGCGATGCTGAATAAAGAAGCTC
AAATTCCTTCCTCAACAAGGCGATCAACTGTATGAGTGGTGATGGGTTTGGGAACTAGCCTATCCAAGCGGGCATGTGGT
GGTGGCGACGACATTCTTGTGGCGGACTTGTGTACTGTTGCGACGACGTCTGTTCCAGCGCGGACGCGCTGAAGTGGTCT
GCATTAACGGCATCTAGAAGACGGATTGTGTGTTGGGTTTGTGGTTGGTGGAAGGCAGGTATGATTTTCTCCTCCGGCAT
CGGGATGATAGATCTAGAGTTCGACGGCATGTCCAGGGTGTTACCCCGGTCTAATTAGTTCAACGACAATGGCTTCGGTT
CTAGTGAGTAACCTTGGAGATCCACAAAACTGC--ATCAGTAGTGAAGCTGGGTCAAGTTCCGATAAGGAG----GTGAT
CTGTC-TTTTTTTTTGTGGTTGTTGTTGTGGTGCAGAGGTAGGTGATGGGCATCAGTGTCAAGTTCAGGGGATTTTTTGG
TC---TTGATTGTAATTTTCTTTCCTGGGATTGACGAATAAATTCAA-------------AGCACCAACATTAAGTCTAA
AACTTGAATCCTGATGGGTTAG--AGATACCAGTATACTTCTAACCATTCTACCGGTCTGCTTCTCA-CATCGTTTACTG
GTAGATCTTATCTCTATCCGATAGAGATCTTAACTAGAAAAAA--AATACCAGAGTACATATAATCGAGCACTGTCTCGC
CCAGTGTGAATAAACACGGCGGGGCCATGCGCGCGTGCGCTCTCGCCATCGAGACGTAACGTACGTATCATGCAGTGCAC
CGCTGGCGGCAATGCACCGGCCGCCTCTATTTATAGCCCACCACGCCCCATCCTTTTCCACAT--CCCAGCCTCAACAAC
CACCAAAGTACACACGCCACACTAATCAAGTACACATCCA------GGCCACCAAGCCACCCAGCGAGCGATCACCATAT
CACACATAGCGCCATGTCTGGCGTGTGGGTGTTCCGCAACGGGGTGGTGAAGCTGGTGGAGAACCACCCGGCGTCGGCGG
----------------CGGGACCTCCCGGCGGCGGGGCGGTCCGGCGCAAGGCGCTGCTGCACACGCCCACGGGGGAGGT
GGTCGCCTCCTACGCCTCGCTGGAGCGCAAGCTCCTCGCGCTCGGCTGGGAGCGCTACTACGCCGGCGGGGGTGGCGCCG
CCGGCGACTGCATGCTCAGGTTCCACAAGCGCTCCTCCGTCGACCTCATCTCCCTCCCCAAGGACTTCGGCCAGTTCAGC
TCCGTCCACATGTACGACGTCGTCATCAAGAATCGCGACGCCTTCCGCGTCATCGACGTCTAGCTGAGCTAGCTGGCTGA
TC---CGGCCATTCTAT-GAAGCAAGCACGGCTAGCTCGTGCGCGCCGGCGGCCGCCACCGTCGCATCCATGTCGTCATC
GATCTCCGCTGTTTAACTTGTCCTCCTTGTGTCTGTGTG------------TACGTACCCTGCACGTATATACGTGTGTA
TGTATATGTAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------
>chr3A_750
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------GTCTCGC
CCAGAGTGAATAAACACGGCGGGGTCATGCCCG-GTGCGCTCTCGCCATCGAGACGTAACGTCCGTATCAGGCAGTGCAC
TGCTCGCGGCAATGCACCGGTCGCCTCTATTTATAGCCTCCCACGCCCCATCCTTTTCTACAT--CCCAGGCTCAAAAAT
CACCAAAGTACACACACCACACTAATCAAGTACACATCCAGATCCAGGCCATCAGGTTACCCAGAGAAAGATCACCATAT
CACACATAGCGCCATGTCTGGCGTGTGGGTGTTTCGCAACGGGGTGGTGAAGCTGGTGGAGAACCACCCGGCGTCGGCGG
TGGGACCTCCCGACAGCGGGCC----------------GGTCTGGTGCAAGGCGCTGCTGCACACGCCCACGGGGGAGGT
GGTCGCCTCCTATGCCTCGCTGGAGCGCAAGCTCGTCGCGCTCGGCTGGGAGCGCTACTATGCTGGTGGGGGTGGCGCCG
CCGGCGACTGCATGCTCAGGTTCCACAAGCGCTCGTCCGTCGACCTC---------------------------------
--------------------------------------------------------------------------------
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-------------------
>chr3A_750
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-------------------------------------------------------------------------GTCTCGC
CCAGAGTGAATAAACACGGCGGGGTCATGCCCG-GTGCGCTCTCGCCATCGAGACGTAACGTCCGTATCAGGCAGTGCAC
TGCTCGCGGCAATGCACCGGTCGCCTCTATTTATAGCCTCCCACGCCCCATCCTTTTCTACAT--CCCAGGCTCAACAAT
CACCAAAGTACACACACCACACTAATCAAGTACACATCCAGATCCAGGCCATCAAGTTACCCAGAGAAAGATCACCATAT
CACACATAGCGCCATGTCTGGCGTGTGGGTGTTCCGCAACGGGGTGGTGAAGCTGGTGGAGAACCACCCGGCGTCGGCGG
----------------CGGGACCTCCCGACGGCAGGGCGGTCTGGCGCAAGGCGCTGCTGCACACGCCCACGGGGGAGGT
GGTCGCCTCCTACGCCTCGCTGGAGCGCAAGCTCGTCACGCTCGGCTGGGAGCGCTACTATGCCGGTGGGGGCGGCACCG
CCGGTGACTGCATGCTCAGGTTCCACAAGCGCTCCTCTGTCGACCTCATCTCCCTCCCCAAGGACTTCGGCCAGTTCAGC
TCCGTCCACATGTATGACATCGTCATCAAGAGCCGCGACGCCTTCCGCGTCATCGACGTCTAGGCTTGCTGGCTGGCTGA
TCGTCCAGCCATTCGATAGAAGCAAGCACAGCTAGCTCGTGCGCGCTGGCCGCCGCCACCGTCGCATCC------TCATC
GATCTCCGCGGGTTAACTTTTCCACCTTGTGTATGTGTG------------TACGTGCCCTGCACGTATATGCGTGTTTA
TGTATATGTACATGGTGTATTGACGTATATGTAGATATACATGCTGCGTGTGTATTGTGGTTAATTATTATTTTGTCTAC
TAG-----TATTATGCTATCGATGTGCCATGTGCGGGGACCTTGTGTATCACTTGCCACTTGCTCGTCTTCTTTTGATCA
A--GCTTGTTTGGTATAGTAATGATTTGGAGAGGCCATTAGAAAATTATTCACTCCAAACTAATATGTGGTTGAAATTGA
ATGGTTAGCAGGGTAGTTATACATATTGTTTTGTCTCAAAAGGCGGCATATTGTTTAGTAGAAGGTGATGTTTTCGCTGA
TAGCGAGACGTCTATTCTCGCTTTGTCAATCTTAAAGCACCACGACTC-------------------------------T
GGTGG-------------------------------ACTGGTGGTGTATCTGCTATGTTGTGTTGTATTCGGTGTTTCTA
ATAG-AATGTTTGTTTTGTGAATGCTCGTGCAGCTTCTGATCCGATTACATATATTTAAACTTGTATCGGATAACGCCAT
TTTGCAAAATTGAATTTTGGATGAAGCAAAATGAAAGGTTGACA-GGTGCTAGGTTCCTAGGACTG--CTTCAAAAGAAT
GGTCTGGTGCAACTTTTTGCAGGTTTGAAGAAACCCAAACGCAAGCTCTCCACTT-GGAGTGATTTTGTTAGTACAATAT
GGACAC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>chr3B_842
--------------------------------------------------------------------------------
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------CGGTAATGTACCGGCA-CCTCTATTTATAGCCTCCCACGCCCCATCCTTTTCCGCATCCCACAGCCTCAACAAC
AACCCAAG--CACAGAGCGCACTGATCAAGTACACATCCG------GGCTCTCAAGCTACCCGGAGAAAGATCACCATAT
CACACATAGCGCCATGTCTGGCGTGTGGGTGTTCCGCAACGGGGTGGTGAAGCTGGTGGAGAACCACCCCGCGTCGGCGG
----------------CGGGGC----------------GATGCGGCGCAAGGCGCTGCTCCACACGCCCACTGGGGAGGT
GGTCGCCTCCTACGCCTCCCTGGAGTGCAAGCTCGTCGCACTCGGCTGGGAGCGCTACTACGCCGTCAGGGGCGGCGCCG
CCGGCGACTGCATGCTCAAGTTCGACAAGCGCTCCTCCGTCGACCTCATCTCCCTCCCCAAGGACTTCGGCCAGTTCAGC
TCCGTTCACATGTACGACGTCTTCATCAAGAACCGCGACGCCTTCTGCGTCATCGACGTCTAGCCTAGCTGGCTGGCTGA
AGATTCGGCCATTCGATCGAAGTAAGCACGGCTAGCTCGTCCGCGCCGGCGGCCGCCACCGTCGCATCCATGTCGTCATC
GATCTCCGCTGGTTAACTTTTCCACCTTGTCTACAC--------------------------------------------
---------------------------------------------GCGTGTGT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------
>chr3A_1244
--------------------------------------------------------------------------------
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--------------------------------TCCTCCGTCGACCTCATCTTCCTCCCCAAGGACTTCGGCCAGTTCAGC
TCCGTCCACATGTACGACGTCGTCATAAAGAACCGTGACGCCTTCCGAGTCATCGACGTCTAGGCATGCTGGCTGGCTGA
TCGTCCGGCCATTCGATAGAAGCAAGCACAGCTAGCTCGTGCACGCCGGCCGCCGCCACCGTCGCATCC------TCATT
GATCTCCGCTGGTTAACTTTTCCACCTTGTGTATGTGTG------------TACGTGCCCTCCATGTATATGCGTGTGTA
TGTATCTGTACGTGGTGTATTGACATATATGTAGATATACATGTTGCGTGTGTATTGTGGTTAATTATTATTTTGTCTAC
TAG-----TATTATGCTATCGATGTGCCATGTGCGGGGACCTTGTGTATCACTTGCCACTTGCTCGTCTTCTTTTGATCA
A--GCTTGTTTGGTATAGTAATGATTTGGAGAGTCCATTAGAAAATTACTCACTCCAAACTAACATGTGGTTGAAATTGA
ATGGTTAGCAGGGTAGTTATACATATTGTTGTGTCCCAAAAGGCAACATATTATTTAGTAGAAGGTGATGTTTTCACTGA
TAGCGAGACGTCTATTCTCGCTTTGTCAATCTTAAAGCACCACGACTT-------------------------------T
GGTGG-------------------------------ACTGGTGGTGTATCTGCTATGTTGTGTTGTATTCGGTGTTTCTA
ATAG-AATGTTTGTTTTGTGAATGCTCGTGCAGCTTCTGACCCGATTACATATATTTAAACTTGTATCGGATAACGCCAT
TTTGCAAAATTGAATTTTGGATGAAACAAAATGAAAGGTTGACA-GGTGCTAGGTTCCTAGGACTGTGCTTCAAAAGAAT
GGTCTGGTGCAACTTTTTGCAGGTTTGAAGAAACCCAAACGCAATCTCTCCACTT-GGAGTGATTTTGTTAGTACAATAT
GGACAC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>chr3A_1244
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------TCCTCCGTCGACCTCATCTTCCTCCCCAAGGACTTCGGCCAGTTCAGC
TTCGTCCACATGTACGACGTCGTCATAAAGAACCGCGACGCCTTCCGCGTCATCGATGTCTAGGCATGCTGGCTGGCTGA
TCGTCCGGCCATTCGATAGAAGCAAGCACAGCTAGCTCGTGCACGCCAGCCGCCGCCACCGTCGCATCC------TTATT
GATCTCCGCTGGTTAACTTTTCCACCTTGTGTATGTGTG------------TACGTGTCCTCCACGTATATGGGTGTGTA
TGTATATGTACATGGTGTATTAACATATATGTAGATATACATGTTGCGTGTGTATTGTGGTTAATTATTATTTTGTCTAC
TAG-----TATTATGCTATCGATGTGCCATGTGCGGGG-CCTTGTGTATCACTTGCCACTTGCTCGTCTACTTTTGATCA
A--GCTTGTTTGGTATAGTAATGATTTGGAGAGTCCATTAGAAAATTACTCACTCCAAACTAACATGTGGTTGAAATTGA
ATGGTTAGCAGGGTAGTTATACATATTGTTGTGTCTCAAAAGGCGGCATATTATTTAGTAGAAGGTGATGTTTTCGCTGA
TAGCGAGACGTCTATTCTCGCTTTGTCAATCTTAAAGCACCACGACTT-------------------------------T
GGTGG-------------------------------ACTGGTGGTGTATCTGCTATGTTGTGTTGTATTCGGTGTTTCTA
ATAG-AATGTTTGTTTTGTGAATGCTCGTGCAGCTTCTGACCCGATTACATATATTTAAACTTGTATCGGATAACGCCAT
TTTGCAAAATTGAATTTTGGATGAAACAAAATGAAAGGTTGACA-GGTGCTAGGTTCCTAGGACTGTGCTTCAAAACAAT
GGTCTGGTGCAACTTTTTGCAGGTTTGAAGAAACCCAAATGCAATCTCTCCACTT-GGAGTGATTTTGTTAGTACAATAT
GGACAC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>chr3B_1614
--------------------------------------------------------------------------------
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---------ATTAGGCCATCGATGTTCT------GGGA-CCTTGTGCATGACTCGCCACTTGCTCGTCTTCTCTTAATCA
AAGGCTTATTTGTTATACAACTGCTGCACCCGAGAGCAAACC--------------------------------------
--------------------ACATGTTGTTGTGTCTCATCAGACGGCATATTATT-AGTAGAATTTGATGTTTTTGCTGA
TAGTGAGACGTCTGTTATGGCTTTGTCAACCTTAAAGCACCACGGCTC-------------------------------C
GGTTAGTGTTGTGTGAGTATGTACCATTAGTGGTGTACTGGTGGTGTATCTGCTATGTTGTGTTGTATTCGGTGTTTCTA
AAATAAATGTTTGTTTCATGAATGCTTGTGTGCCTTGTGACCAAATTACATATATTTAAACTTGTTTCGGATAACGCCAT
TTTGCATAATTGAATTTCGGATGAAGG----------------------------TCCTAGGATTGTGCGTCAATAGAAT
TGTGGAGTGCACCTTTTTGAAGGTTTGAAGAAACCCAAACGCAAGCTCTCCACTTGGGAGTGATTTTGTTAGTACAATAT
GGACACACAGGCGTTGTCATACCAACACATCACACATCGTCCTACTATAGGGACTTGTTATTAACTGGAATGTGGTTTCC
CATTGATAAA----------------------------------------------------------------------
-------------GGAATAATACATATTGGTGAGACAGAGAAGGACATCGAAACTATGATCTTACCGGTGGTGGGCTAAG
GATTCATCCACCTTCATAG
>SNPs
-----SSS-SSSSSSSSSSSSSSSS-SSSS-S---SSS-SS-SSSS-SSSSSS-SS-SSSSS-SS-SSSSSS-SSS-SSS
-SSSSSSSSSSS-SS--SSSSS-SSSSSSSSS--SSSSS-S-SSS-SS-S-SSS-SSS-SS--SSSS-SSSSSSSSSSS-
-SSSSSS-SSSSSSSSS-SSSSS-S---S--SSSSSS-S--SSSSSSS--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S-----S---------------S-------SS------S-------------------S--S-------------S---
S--S------------------------------------------SS--------S--------S-----S-----S--
--------------------S-------S---SSS-----S---------S----S-----S--------SSSSS-----
--S---------SSSS----S----S----S------------------S-S--SS----------------S-S--SSS
SSSSS----S-----------------S-----------------S-SSSSSSSSSSSS--------S-S------S---
S----S---SSSSS---SSSSS-S--------S-------------S--------------------S---S--------
------------S------------S-----------------SS---------------S--S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
-----------------------S-----S--------------------------S-----------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-------S------------S-----------------------
---------------------------------------S--SSSSSSSSS------S----------------------
-------------S-----------------------------S---S--------------S-----------------
--SSSSSS------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------S---------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
--------------------------------------------------S-----------------------------
-------------------------------------------------------S-----S------S-----------
--------------------------S-----S-----------S---S------------S------------------
----S----------------------------------------------SS---------------------------
---------------------------------------------------S---------S-----------S----S-
--------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS---S------------------SSS-S--S------S-S----S-----------------------
-------------SS----
>forward_874
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------CGAGTTCGGATGAGGATGCA------
--------------------------------------------------------------------------------
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-------------------
>reverse_2397
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------TAGT
GGTGGACTGGTGGTGT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
