>input_sequence_82813
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------ATGGCGCCAGACAGCTCGACCACCCTGCGCTCGTCCA
TCCAGCCGCATCCATCGTCGATATGCAGCTGCACCATGCCGCCACCACTCGTCGTCAATGACGCGGTAGATACAACGCCG
CACCACCTGGCAACCTCCACACCATCGCCACTGCTGGAGCCACTCAGAGCCCACCATCCACAACATCTCTCCCCCGAACA
GCAGTTCCTCCCAAGACGGCGCCTCCATGGAGGATACGACGCGCAGGACGCCGCCGCCGCCCAATCCAGACTGAATTTTG
GACGTTCGTCCGGGAGGGGTTCGGGGGTGGATA-GGGGGGACCTCGGCTTCGCCTCCAGGAAGGGTAACGGCGTCAAGTG
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr5D_1_TraesCS5D01G175400
ACCCGAACTCCCACCCGTAGGCGTCAAGGTACCCGCCGTTGATGAGGGCTCAATACATGTCCAGTGTGACTTGGTGAAGA
TGG-AAAAGGAGACTTGAGCATCCTCTCCATATCCCCAGGTTTGAGGCTCCTTGCCTCAAGGCCGGCGAGCCACCAGAGG
TGAGCACTAGTGTAGGGGACAAGGATTCGGGTAGCATGATGGTCGAGGAAAGCCAGCCATCAGTGCTAATGAAGGGGTGG
TGAAAGAAGAGGGGTTTGAGTGGCGAGGGAGGTTATGACCGAAGCATCCCATCTCCTGTGCTTCCCCACGC-GTGTAGCC
GCGTGCAACGATGCACCATGTGGAAACATGCGAATTCCTCTGTCAGGCCCGAGATGCTTTAAGAACCGTGTGACCCACGA
ATTCGATGCATCCTAGCCAAGCAAACCGACTCGTTTGGCATCCTTAGGGCCTGCATGGGACGAATGCCAACAACCAAACA
TATCCTGGTTCTATCTAAATTCAAGATTCAACTATCAAAACAAATCCTAGTACTTTCCAAATCCAAGATTCAACTATCGA
AACAAATCCTAGTACTTTCCAAATCCAAGATTCAACTATCGCTACCTTTTTTGGATATGTCTGTAGGCATTTTTTTTAGA
AAAGGAGGATGCACCCCCGGCCTCTGCATCTGGACGATGCATACGGCCACTTTATTAATTATTAAGTAAAAAAAT-CTTA
CAAAGTAGTACATCAGTAAGCCTGAAGCCACCATCTAGGCAACATCTGTCGCTACTCCTACCCCCTTGATGCAGTGGTGT
TGAATGTCCGAGCCTAATACTAAACAGACATCGCACCAAATCCTAACATCTAATGCCGGATGCCCCATCCTAGCCACATA
CCGGGACTGGGTCACACGCCGGTCCGGCGCACTCACCGAGGCTGCTGCTGCCTTCTTCCACCGATCCATCTCCAGAGCAG
GTACTGACGCACAGACCTTGCCAGGCCTGCCGTCGACGCCACCATGGCGCCAGACAGCTCGACCACCCTGCGCTCGTCCA
TCCAGCCGCATCCATCGTCGATATGCAGCTGCACCATGCCGCCACCACTCGTCGTCAATGACGCGGTAGATACAACGCCG
CACCACCTGGCAACCTCCACACCATCGCCACTGCTGGAGCCACTCAGAGCCCACCATCCACAACATCTCTCCCCCGAACA
GCAGTTCCTCCCAAGACGGCGCCTCCATGGAGGATACGACGCGCAGGACGCCGCCGCCGCCCAATCCAGACTGAATTTTG
GACGTTCGTCCGGGAGGGGTTCGGGGGTGGATA-GGGGGGACCTCGGCTTCGCCTCCAGGAAGGGTAACGGCGTCAAGTG
ACGTCGCCGATGCCGGGCCGAACACGCCGACCAAAGTTTTCTCCGGTCCCCATCCTATGCCACCAAACGTCCGTGTACTC
CGGATCCGGCACGCCACGATCCAAAATCCGCGAAGATGAAAGAGCCATGGGGCTCAACCCACCAGAAAGGAGGATCGAGA
AGAACTCCTTGTAGATCTCCAGACGCCGA---------------------------------------------------
---ATCCAACGATCCGACGTGGTCAGCGACGATCATCAACACCCCGCGGCGGCCGACGGAGTCCGAAGAAAGGATCCAGA
TGGATCCGATCTGGATCCGGCAGCACCCGCGACCACCGGTCAGGCCAACGCAGCCACCACC-TCACGACACGCAGGTCGC
CACCGCCGCGCCGCGCACTTCGCCGATGGGAGACCCGCTTGCCGCGCCGCCGGACCCCACGTTCGCCCAGCGTTCCTCTG
GATCCCGCTGTCCCGCGCCAGCCAAGACGGAGAGGATGGGGAGAAGCCCCGCCGCCGCCCAGCCGGCCAGGCTTCGCCCG
GCGGCGCTATGGACGGCGGCGAGGAGGGGG--AGAGGAGGAGGAGACTCGAGGGGCGGCGGCTAGGGTTTTCCCCCTGGG
TCGCCCGCGGGGGCGACGCGAGGGGCGGCCTCTGTCTGTAGGCATGTTGTCCTATTTTTGCCGGTTGTGCCAATTCATCC
TGTAATCTTTATTTTTACTTTTTCCGGATCATTGCTTGGAACT---TAGATACTCGGTTCACTATAATAAATGTTTGTGT
GCA-------ATGCACAGGCC-G-GGTACTCCTCTTTTTC---AAGAAAAAAAAAAGAGATTCAACTAGCACTAGATACG
TAAATAAAAGCTTTGACAATCATTGACTCACAATGGCCAAATCTGCACAATACCAAGGCAAGACAGAACATTACGGAAGT
CGAAATTCGATGAATATTACGGAATACGACCAAAG--------CGTCCAAAATAAGCATAATTTAACAGTACACCTTGCT
GAATATCATCAAGTCCAAATGACGTTTGGATAAACATAGCA
>chr5B_1
ACCCGAACTCCCACCCGTACGCGTCAAGGTACCCGCCGTTGATGAGGGCTCAATACATGTCGAGCGTGACTTGGTGAAGA
TGG-AAAAGGAGACTTGAGCATCCTCTTCATATCCCCAGGTTTGAGGCTCCTTGCCTCAACGCCGGCGAGCCACCAGAGG
TGAGCACTAGTGTAGGGGACGAGGATTTGGGTAGCACGATGGTCGAGCAAAGCCGATCATCAGTGCCAACGAAGGGGTGG
TGAAAGAAGAGGGGTTTGAGTGGCGAGGGGAGTTATGACCAAAGCATCCCATCTCCTGTGCTTCCCGACCGTGTGTAGCC
GCGTGCAATGATGCACCCTGTGGAAACATGCGAATTCCACTGCCAGACCGAGGATGCTTTAAGAACCGTGCGACCCACAA
ATTTGATGCATCCTAGCTAAGCAAATCGACTCGTTTGGCATCCTTAGGGCCTGCATGGGACAAATGCTAACAATCAAACA
CATCCTGGTA-TATCTAAATTCAAGATTCAACTATCGAAACAAATCCTAGT-----------------------------
-------------ACTATCCAAATTCAAGATTCAACTATGGCTACCTTTTCGG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------ATA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TGTGTGTAGGCATGTTGTCCTGTTT-TGCCGGTTGTGGCAACTCATCC
TGTAATCTTTATTTTTACCTTTTCCGGATCATTGCTTGGAACATACTAGATACTCGGTTCACTTTAATAAATGGTTGTGT
GCATCACGCAATGCACAGGCCGG-GGTACTCCTCTTTTTTCAAAAAAAAAAAGAAAAAGACTCAACTATCACTAGATTCG
TAAATAAAAGCTTTGACAATCATTGACTCGCAATGGCCAAACCTGCAAAATACCAAGGCAAGCCAGAACATTACGGAAGT
CGAAATTCGATGAATATTACGGAATACGACCAAAACAATGCATCGTCCAAAATAAGCATAATTTAACAGTACACCTTGCT
GAATATCATCAAGTCCAAATGACGTTTGGATAAACATAGCA
>chr5A_24
-----------------------TCAAGGTACCAGCCATTGATGGGTGCTCAATACATGCCGAGCGCGGCTTGGTGAAGA
TGGGAAAAGAAGACTTGAGCCTCCTCTCCATATCCCCCGATTTGAGGCTCCTTGCCTCAATGCCGGTGAGCCACCAGAGG
TGAGCACTAGTGTAGGGGACAAGGATTCAAGTAGTAAGATGGTCGAGCAAAGCCGGCCTTCAATGGCAAAGAAGGGGTGG
TGAAATAATAGGGGTTTGAATGGTGAGTGGAGTTATGACCGAAGCATCCCGTCTCTCGTTCTTCCA-ACGC-GTGTAACC
GCG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TGCAACGATG
CATCCCTTGGAAACATGTGAATTCCTC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TCCCAGCCCAGAGATGCTTTAAGAACCGTGCGAGTCATGAATTCAGTGCATCCTAGCTAAC
CAAACGTCTATTTTGGCATCGTCAGGGTCTGCATGGGAAGAATGCCAACAACCAAACACATCCTCGTACTATCTAAATTC
AAGATCCAACTATCCAAACACATCCTTGTACTATCCAAATTCAAGATTCAAGTATCGCTACTTTTTCCGAATA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TGTGTGTATGCATGTTGTCCTATTTTTGCGAGTTATGGCAATTCACCA
TGTAATCTTTATTTTTACTTTTTCCAAGTCATTGCTTGGAACT---TAGATACTTGGTTTGCTTTAATAAATGGTTGTGT
GCATCATACAATCCACAGGACGGTGGTACTCCTCCTT-------------AAAAAAAGGATTCAACTATCGCTAGATACG
TAAATAAAAGCTTTGACAATCATCGACCCACAATGGCCAAATCTGCAAAATACCAAGGCAAGAAGGAACAATACAGAAGT
CGAAATGCGATGAATATTACAGAATACGACCAAAGCAATGCATCGTCCAAAATAAGCATAATTTAACAGTACACCTTGCT
AAATATCATCAAGTCCAAATGACGTTTGGATAAACATAGCA
>chr3D_625
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GCATTTTTTTTAGA
AAAGGAGGATGCACCCCCGGCCTCTGCATCTGGACGATGCATACGACCACTTTATTAATTATTAAGCACAAAAGACCTTA
CAAAGTAGTGCATCAGTAAACCTGAAGCCATCATCTAGGCAACATCTGTCACTACTCCTATCCCCTTGATGCAGTGGTGC
CGAATGTCCGAACCTAATACCAAACAAACATCGCACCAAATCCTGACATCTAATGCCGGATGCCCCATCCTAGCCACATA
CCGGGACTGGGTCACACGCCGGTCCGGCGCACTCACCGAGGCTGCCGCCGCCTTGTTCCACCGATCCATCTCCAGAGCAG
GTACTGACGCACAGACCTTGCCAGGCCTGCCGTCGACGCCACCATGGCGCCAGACAGCTCGACCACCCTGCGCTCGTCCA
TCTAGCCGCATCCGTCGTCGATATGCAGCTGCACCATGCCGCCACCACTCGTCGTCAATGACGCGGTAGATACAACGCCG
CACCACCTGGCAACCTCCACACCATCGCCACTGCTGGAGCTACTCGGAGCCCACCATCCACAACATCTCTCCCCCGAACA
GCAGTTCCTCCCAAGGCGGCGCCTCCATGGAGGATACGACGCGCAGGACGCCGCCGCCGCCCAATCCAGACTGAATTTTG
GACTTTCGTCCGGGAGGGGTTCGGGGGTGGATA-GGGGGGACCTCGGCTTCGCCTCCAGGAAGGGTAACGGCGTCAAGTG
ACGTCGCCGATGCCGGGCCGAACACGCCGGCCAAAGTTTCCTCCGGTCCCCATCCTATGCCACCAAACTTCCGTGTACTC
CGGATCCAGCAAGCCACGATCCGAAACCCGCGAAGATGAAAGAGCCATGGGGCTCAACCCACCAGAAAGGAGGATCGAGA
AGAACTCCTTGTAGATCTACAGACGCCGA---------------------------------------------------
---ATCCAACGATCCAACGTGGCCAGCGACGATCATCACCACCCCGCGGCGGCCGACGGAGTCCGAAGAAAGGATCCAGG
TGGATCCGATCTGGATCCGGCGGCACCCGCGACCACCGGTCAGGCCAACGCAGCCACCACC-TCACGACACGCAGGTCGC
CACCGCCGCGCCGCGCACGACGCCGATGGGAGACCCGCCCGCCGCGCCGCCGGACCCCACGTTCGCCCGGCGTTCCTCTG
GATCTCGTTGTCCCGCGCCAGCCAAGACGGAGAGGATGGGGAGAAGCCCCGCCGCCGCCCAGCCGGCCAGGCTTCGCCCG
GCGGCGCTATGGACGGCGGCGAGGAGGGGG--AGAGGAGAAGGAGACTCGAGGGGCGGCGGCTAGGGTTTTCCCCCCGGG
TCGCCCGCGGGGGCGACGCGAGGGGC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr1D_627
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ATTTTTTTTAGA
AAAGGAGGATGCACCCCCGGCCTCTGCATCTGGACGATGCATACGGCCACTTTATTAATTATTAAGCACAAAAGACCTTA
CAAAGTAGTACATCAGTAAGCCTGAAGCCACCATCTAGGCAACATCTGTCGCTACTCCTATCCCCTTGATGCAGTGGTGC
CGAATGTCCGAGCCTAATACCAAACAGACATCGCACCAAATCCTAACATCTAATGCCGGATGCCCCATCCTAGCCACATA
CCGGGACTGGGTCACACGCCGGTCCGGCGCACTCACCGAGGCTGCCGCCGCCTTCTTCCACCGATCCATCTCCAGAGCAG
GTACTGACGCACAGACCTTGTCAGGCCTGCCGTCGACGCCACCATGGCGCCAGACAGCTCGACCACCCTGCGCTCGTCCA
TCTAGCCGCATCTGTCGTCGATATGCAGCTGCACCATGCCGCCACCACTCGTCGTCAATGACGCGGTAGATACAACGCCG
CACTACCTGGCAACCTCCACACCATCGCGACTGCTGGAGCTACTCGGAGCCCACCATCCACAACATCTCTCCCCCGAACA
GCAGTTCCTCCCAAGACGGCGCCTCCATGGAGGATACGACGCGCAGGACGCCGCCGCCGCCCAATCCAGACTGAATTTTG
GACTTTCGTCCGGGAGGGGTTCGGGGGTGGATA-GGGGGGACCTCGGCTTCGCCTCCAGGAAGGGTAACGGCGTCAAGTG
ACGTCGCCGATGCCGGGCCGAACACGCCGGCCAAAGTTTCCTCCGGTCCCCATCCTATGCCACCAAACCTCCGTGTACTC
CGGATCCGGCAAGCCACGATCCGAAACCCGCGAAGATGAAAGAGCCATGGGGCTCAACCCACTAGAAAGGAGGATCGAGA
AGAACTCCTTGTAGATCTCCAGACGCCGA---------------------------------------------------
---ATCCAACGATCTGACGTGGCCAGCGACGATCATCACCACCCCGCGGCGGCCGACGGAGTCCGAAGAAAGGATCCAGA
TGGATCCGATCTGGATCCGGCGGCACCCGCGACCACCGGTCAGGCCAACACAGCCACCACC-TCACGACACGCAGGTCGC
CACCGCCGCGC-----ACGACGCCGATGGGAGACCCACCCGCCGCGCCGCCGGACCCCACGTTCCCCCGGCATTCCTCTG
GATCTCGCTGTCCCGCGCCAGCCAAGATGGAGAGGATGGGGAGAATCCCCGCCGCCGCCCAGCCGGCCAGGCTTCGCCCG
GCGGCGCTATGGACGGCGGCGAGGAGGGGG--AGAGGAGGAGGAGACTCGAGGGGCGACGTCTAGGGTTTTCCCCCCGGG
TCGCCCGCGGGGTCGACGCGAGGGG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr7D_627
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ATTTTTTTTAGA
AAAGGAGGATGCACCCCCGGCCTCTGCAT-TGGACGATGCATACGACCACTTTATTAATTATTAAGCACAAAAGACCTTA
CAAAGTAGTACATCAGTAAGCCTGAAGCCATCATCGAGGCAACATCTGTCGCTACTCCTA-TCCCTTGATGCAGTGGTGC
CGAATGTCCGAGCCTAATACCAAACAGATATCGCACCAAATCCTGACATCTAATGCCGGATGCCCCATCCTAGCCACATA
CCGGGACTGGGTCACACGCCGGTCCGGCGCACTCACCGAGGCTGCCGCCGCCTTGTTCCACCGATCCATCTCCAGAGCAG
GTACTGACGCACAGACCTTGCCAAGCCTGCCGTCGACGCCACCATGGCGCCAGACAGCTCGACCACCCTGCGCTCGTCCA
TCTAGCCGCATCCGTCGTCGATATGCAGCTGCACCATGCCGCCACCACTCGTCGTCAATGACGCGGTAGATACAACGCCG
CACCACCTGGCAACCTCCACACCATCGCCACTGCTGGAGCTACTCGGAGCCCACCATCCACAACATCTCTCCCCCGAACA
GCAGTTCCTCCCAAGACGGCGCCTCCATGGAGGATACGACGCGCAGGACGCCGCCGCCGCCCAATCCAGACTGAATTTTG
GACTTTCGTCCGGGAGGGGTTCGGGGGTGGATA-GGGGGGACCTCGGCTTCGCCTCCAGGAAGGGTAACGGCGTCAAGTG
ACGTCGGCGATGCCGGGCCGAACACGCCGGCCAAAGTTTCCTCCGGTCCCCATCCTATGCCACCAAACCTCCGTGTACTC
TGGATCCAGCAAGCCACGATCCGAAACCCGCGAAGATGAAAGAGCCATGGGGCTCAACCCACCAGAAAGGAGGATCGAGA
AGAACTCCTTGTAGATCTCCAGACGCCGA---------------------------------------------------
---ATCCAACGATCCAATGTGGCCAGCGACGATCATCACCACCCCGCGGTGGCCGACGGAGTCCGAAGAAAGGATCCAGG
TGGATCCGATCTGGATCCGGCGGCACCCGCGACCACCGGTCAGGCCAACGCAGCCACCACC-TCACGACACGCAGGTCGC
CACCGCCGCGCCGCGCACGACGCCGATGGGAGACCCGCCCGCCGCGCCGCCGGACCCCACGTTCACCTGGCGTTCCTCTG
GATCTCGTTGTCCCGCGCCAGCCAAGACGGAGAGGATGGGGAGAAGCCCCGCCGCCGCCCAGCCGGCCAGGCTTCGCCCG
GCGGCGCTATGGACGGCGGCGAGGAGGGGG--AGAGGAGGAGGAGACTCGAGGGGCGGCGGCTAGGGTTTTCCCCCCGGG
TCGCCCGCGGGGGCGACGCGAGGGGC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr6D_627
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ATTTTTTTTAGA
AAAGGAGGATGCACCCCCGGCCTCTGCATCTGGACGATGCATACGGCCACTATATTAATTATTAAGCACAAAAGACCTTA
CAAAATAGTACATCAGTAAGCCTGAAGCCACCATCTAGGCAACATCTGTCGCTACTCCTACCCCCTTGATGCAGTGGTGT
CGAATCTCCGAGCCTAATACCAAACAGACATCGCACCAAATCCTAACATCTAATGCCGGATGCCCCATCCTAGCCACATA
CCGGGACTGGGTCACACGCCGGTCCGGCGCACTCATCGAGGCTGCCGCCGCCTTCTTCCACCGATCCATCTCCATAGCAG
GTACTGACGCACAGACCTTGCCAGGCCTGCCGTCGACGCCACCATGGCGCCAGACAGCTCGACCACCCTGCGCTTGTCCA
TCCAGCCGCATTCGTCGTCGATATGCAGCTGCATCATGCCGCCACCACTCGTCGTCAATGACGCGGTAGATACAATGCCG
CACCACCTGGCAACCTCCATACCATCGCCACTACTGGAGCTACTCGGAGCCCACCATCCACAACATCTCTCCCCCGAACA
GCAGTTCCTCCCAAGACGGCGCCTCCATGGAGGATACGACGCGCAGGACGCCGCCGCCGCCCAATCCAGACTGAATTTTG
GACTTTCGTCCGGGAGGGGTTCGAGGGTGGATT-GGGGGGACCTCGGCTTCGCCTCCATGAAGGGTAACGGCGTCAAGTG
ACATCGCCGATGCTGGGCCGAACATGCCGACCAAAGTTTCCTCCGTT-CCCATCCTATGCCACCAAACCTCCGTGTACTC
CGGATCCGGCAAGCCACGATCCGAAACCCGCGAAGATGAAAGAGCCATGGGGCTCAACCCACCAGAAAGGAGGATCGAGA
AGAACTCCTTGTAGATCTCCAGACGCCGA---------------------------------------------------
---ATCCAACGATCCGATGTGGCCAGCGACGATCATCACCACCCCGCGGCGGCCGACAAAGTCCGAAGAAAGGATCCAGA
TGGATCCGATCTGGATCCGGCGGCACCCGCGACCACCGGTCAGGCCAACGCAGCCACCACC-TCACGACACGCAGGTCAC
CACCGCCGCGCCGCGCACGACGCGGATGGGAGACCCGCCCGCCACGCCGTCGGACGCCACGTTCGCCCAGCGTTCCTCTG
GATCCCGCTGTCCCGCGCCAGCCAAGACGGAGAGGATGGGGAGAAGCCCCGCCGCCGCCCAGCCAGCCAGGCTTCGCCCG
GCGGCGCTATGGACGGCGGCGAGGAGGGGG--AGAGGAG-AGGAGACTCAAGGGGCGGCGGCTAGGGTTTTCCCCCCGGG
TCGCCCGCGGGGGCGACGCGAGGGGCG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr1D_628
TTTTAT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TTTAGA
AAAGGAGGATGCA-CCCCGGCCTCTGCATCTGGACGATGCATACGGCCACTTTATTAATTATTAAGCACAAAAGACCTTA
CAAAGTAGTACATCAGTAAGCCTGAAGCCACCATCTAGGCAACATCTGTCGCTACTCCTATCCCCTTGATGCAGTGGTGC
CGAATGTCCGAGCCTAATACAAAACAGACATCACACCAAATCCTAACATCTAATGCCGGATGCCCCATCCTAGCCACATA
CCGGGACTGGGTCACACGCCAGTCCGGCGCACTCACCGAGGCTGCCGCCGCCTTCTTCCACCGATCCATCTCCAGAGCAG
GTACTGACGCACAGACCTTGCCAGGCCTGCCGTCGACGCCACCATGGCGCCAGACAGCTCGACCACCCTGCGCTCGTCCA
TCCAGCCGCATCCGTCGTCGATATGCAGCTGCACCATGCCGCCACCACTCGTCGTCAATGACGCGGTAGATACAACGCCG
CACCACCTGGCAACCTCCACACCATCGCCACTGCTGGAGCTACTCGGAGCCCACCATCCACAACATCTCTCCCCCGAACA
GCAGTTCCTCCCAAGACGGCGCCTCCATGGAGGATACGACGCGCTGGACGCCGCCGCCGCCCAATCCAGACTGAATTTTG
GACTTTCGTCCGGGAGGGGTTCGGGGGTGGATA-GGGGGGACCTCGGCTTCGCCTCCAGGAAGGGTAACGGCGTCAAGTG
ACGTCGCCGATGCCGGGCCGAACACGCCGACCAAAGTTTCCTCCGGTCCCCATCCTATGCCACCAAACCTCCGTGTACTC
CGGATCCGGCAAGCCATGATCCGAAACCCGCGAAGATGAAAGAGCCATGGGGCTCAACCCACCAGAAAGGAGGATCGAGA
AGAACTCCTTGTAGATCTCCAGACGCCGA---------------------------------------------------
---ATCCAACGATCCGACGTGGCCAGCGACGATCATCACCACCCCGCGGCGGCCGACGGAGTCCGAAGAAAGGATCCAGA
TGGATCCGATTTGGATTTGGCGGCACCCGCGACCACCAGTCAGGCCAACGCAGCCACCACC-TCACGACACGCAGGTCGC
CACCGCCGCGCCGCGCACGATGCCGATGGGAGACCCGCCCGCCGCGCCGCCGGACCCCACGTTCGCCCGGCGTTCCTCTG
GATCTCGCTGTCCCGCGCCAGCCAAGACGGGGAGGATGGGGAGAAGCCCCGCCGCCGCCCAGCCGGCCAGGCTTCGCCCG
GCGGCGCTATGGACGGCGGCGAGGAGGGGG--AGAGGAGGAGGAGACTCGAGGGGCGGCGGCTAGGGTTTTCCCCCCGGG
TCGCCCGCGGGGGCGACGCGAGGGGCG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr1D_628
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TTTTTTTTAGA
AAAGGAGGATGCACCCCCGGCCTCTGCATCTGGACGATGCATACGGCCACTTTATTAATTATTAAGCACAAAAGACCTTA
CAAAGTAGTACATCAGTAAGCCTGAAGCCACCATCTAGGCAACATCTGTCGCTACTCCTACCCCCTTGATGCAGTGGTGC
CGAATGTCCGAGCCTAATACCAAACAGACATCGCACCAAATCCTAACATATAATGCCGGATGCCCCATCCTAGCCACATA
CCGGGACTGGGTCACACGCCGGTCCGGCGCACTCACCGAGGCTGCCGCCGCCTTCTTCCATCGATCCATCTCCAGAGCAG
GTACTGACGCACAGACCTTGCCAGGCCTGCCGTTGGCGCCACCATGGTGCCAGACAGCTCGACCACCCCGCGCTCGTCCA
TCCAGCCGCATCCGTCGTCGATATGCAGCTGCACCATGCCGCCACCACTCGTCGTCAATGACGCGGTAGATACAACGCCG
CACCACCTGGCAACCTCCACACCATCGCCACTGCTGGAGCTACTCGGAGCCCACCATTCACAACATCTCTCCCCCGAACA
GCAGTTCCTCCCAAGACGGCGCCTCCATGGAGGATACGACGCGCAGGACACCGCCGCCGCCCAATCCAGACTGAATTTTG
GACTTTCGTCCGGGAGGGGTTCGGGGGTGGATA-GGGGGGACCTCGGCTTCGCCTCCAGGAAGGGTAACGGCGTCAAGTG
ACGTCGCCGATGCCGGGCCGAACACGCCGACCAAAGTTTCCTCCGGTCCCCATCCTATGCCACCAAACCTCCGTGTACTC
CGGATCCGGCAAGCCACGATCCGGAACCCGCGAAAATGAAAGAGCCATGGGGCTCAACCCACCAGAAAGGAGGATGGAGA
AGAACTCCTTGTAGATCTCCAGACGCCGA---------------------------------------------------
---ATCCAACGATCCGACGTGGCCAGCGACGATCATCACCATCCCGCGGCGGCCGACGGAGTCCGAAGAAAGGATCCAGA
TGGACCCGATCTGGATCCGGCGGCACCCGCGACCACCGGTCAGGCCAACGCAGCCACCA-C-TCACGACACGCAGGTCGC
CACCGCCGCGCCACGCACGACGCCGATGGGAGACCTGCCCGGCGCGCCGCCGGACCCCACGCTCGCCCGGCGTTCCTCTG
GATCCCGCTGTCCCGCGCCAGCCAAGACGGAGAGGATGGGGAGAGGCCCCGCCGCCGCCCAGCCGGCCAGGCTTCGCCCG
GCGGCGCTATGGACGGTGGCGAGGGGGGGGGAAGAGGAGGAGGAGACTCGAGGGGTGGCGGCTAGGGTTTTC-CCCCCGG
TCGCCCGCGGGGGCGACACGAGGGGCG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr2D_628
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TTTTTTTTAGA
AAAGGAGGATGCACCCCCGGCCTCTGCATCTGGACGATGCATACGGCCACTTTATTAATTATTAAGCACAAAAGACCTTA
CAAAATAGTACATCAGTAAGCCTGAAGCCACCATCTAGGCAACATCTGTCGCTACTCCTATCCCCTTGACGCAGTGGTGC
CGAATGTCCGAGCCTAATACCAAACAGACATCGCATCAAATCCTAACATCTAATGCCGGATGCCCCATCCTAGCCACATA
CCGGGACTGGGTCACACGCCGGTCCGGCGCACTCACCGAGGCTGCCGCCGCCTTCTTCCACCGATCCATCTCCAGAGCAG
GTACTGACGCACAGACCTTGCCAGGCCTGCCGTCGACGCCACCATGGCACCAGACAGCTCGACCACCCTGCGCTCGTCCA
TCTAGCCGCATCCGTCGTCGATATGCAGCTGCACCATGCCGCCACCACTCGTCGTCAATGACGCGGTAGATACAACGCCG
CACCACCTGGCAACCTCCACACCATCGCCACTGCTGGAGCTACTCGGAGCCCACCATCCACAACATCTCTCCCCCGAACA
GCAGTTCCTCCCAAGACGGCGCCTTCATGGAGGATACGACGCGCAGGACGCCGCCGCCGCCCAATCCAGACTGAATTTTG
GACTTTCGTCCGGGAGGGGTTCGGGGGTGGATA-GGGGGGACCTCGGCTTCGCCTCCAGGAAGGGTAACGGCGTCAAGTG
ACGTCGCCGATGCCGGGCCGAACACGCCGGCCAAAGTTTCCTCCGGTCCCCATCCTATGCCACCAAACCTCCGTGTACTC
CGGATCCGGCAAGCCACGATCTGAAACCCGCGAAGATGAAAGAGCCATGGGGCTCAACCCACCAGAAAGGAGGATCGAGA
AGAACTCCTTGTAGATCTCCAGACGCCGA---------------------------------------------------
---ATCCAACAATCCGACGTGGCCAGCGACGATCATCACCACCCCGCGGCGGCCGACGGAGTCCGAAGAAAGGATCCAGA
TGGATCCGATCTGGATCCGGCGGCACCCGCGACCACCGGTCAGGCCAACGTAGCCACCA-CCTCACGACACGCGGGTCGC
CACCGCCACGCCGCGCACGACGCCGATGGGAGACCCGCCCGCCGCGCCGCCGGACCCCACGTTCGCCCGGCGTTCCTCTG
GATCTCGCTGTCCCGCGCCAGCCAAGACGGAGAGGATGGGGAGAAGCCCCGCCGCCGCCCAGCCGGCCAGGCTTCGCCCG
GCGGCGCTATGGAAGGCGGCGAGGAGGGGG--AGAGGAGGAGGAGACTCGAGGGGCGGCGGCTAGGGTTTTCCCCCCGGG
TCGCCCGCGGGGGCGACGCGAGGGGCG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr6D_628
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TTTTTTTTAGA
AAAGGAGGATGCACCCCCGGCCTCTGCATCTGGACGATGCATACGGCCACTTTATTAATTATTAAGCACAAAAGACTTTA
CAAAGTAGTACATCAGTAAGCCTATAGCCACCGTCTGGGCAACATCTGTCGCTACTCCTACTCCCTTGATGCAGTGGTGC
CGAATGTCCGAGCCTAATACCAAACAGACATCGCACCAAATCCTAACATCTAATGCCGGATGCCCCATCCTAGCCACATA
CCGGGACTGGGTCACACGCCGGTCCGGCGCACTCACCGAGGCTGCCGCCGCCTTCTTCCACCGATCCATCTCCAGAGCAG
GTACTGACGCACAGACCTTGCCAGGCCTACCGTCGACGCCACCATGGCGCCAGACAGCTCGACCACCCTGCGCTCGTCCA
TCCACCCGCATCCGTCGTCGATATGCAGCTGCACCATGCCGCCACCACTCGTCGTCAATGACGCGGTAGATACAACGCCG
CACCACCTGGCAACCTCCACACCATCGCCGCTGCTGGAGCTACTCGGATCCCACCATCCACAACATCTCTCTCCCGAACA
GCAGTTCCTCCCAAGACGGCGCCTCCATGGAGGATACGATGCGCAGGACGCCGCCGCCGCCCAATCCAGACTGAATTTTG
GACTTTCGTCCGGGAGGGGTTCGGGGGTGGATA-GGGGGGACCTCGGCTTCGCCTTCAGGAAGGGTAACGGCGTCAAGTG
TCGTCGCCGATGCCGGGCCGAACACGTCGACCAAAGTTTCCTCCGGTCCCCATCCTATGCCACCAAACCTCCGTGTACTC
CGGATCCGGCAAGCCACGATCCGAAACCTGCGAAGATGAAAGAGCCATGGGGCTCAACCCACCAGAAAGGAGGATCGAGA
AGAACTCCTTGTAGATCTCCAGACGCCGA---------------------------------------------------
---ATCCAACGATCCGACGTGGCCAGCGACGATCATCACCACCCCGCGGCGGCCGACGGAGTCCGAAGAAAAGATCCAGA
TGGATCCGATCTGGATCCGGCGGCACCCGCGACCACCGGTCAGGCCAACGCAGCCACCA-CCTCACGACACGCAGGTCGC
CACCGCCGCGCCGCGCACGACGCCGATGGGAGACTCGCCCGCCGCGCCGCCGGACCCCATGTTCGCCCGGCGTTCCTCTG
GATCCCGCTGTCCCGCGCCAGCCAAGACGGAGAGGATGAGGAGAAGCCCCGCCGCCGCCCAGCCGGCCAGGCTTCGCCCG
GCGGTGCTATGGACGGCGGCGAGGAGGGGG--AGAGGAGGAGGAGAGTCGAGGGGT---GTCTAGGGTTTTCCCCCCGGG
TCGCCCGCGGGGGCGACGCGAGGGGCGG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr2D_629
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TTTTTTTAGA
AAAGGAGGATGCACCCCCGGCCTCTGCATCTAGACGATGCATACGGCCACTTTATTAATTATTAAGCACAAAAGACCTTA
CAAAGTAGTACATCAGTAAGCCTGAAGCCACCATCTAGGCAACATCTGTCGCTACTCCTACCCCCTTGATGCAGTGGTGC
CGAATGTCCGAGCCTAATACCAAACAGACATCGCACCAAATCCTAACATCTAATGCCGGATGCCCCATCCTAGCCACATA
CCGGGACTGGGTCACACGCCGATCTGGCGCACTCACCGAGGCTGCCGCCGCCTTCTTCCACCGATCCATCTCCAGAGCAG
GTACTGACGCACAGACCTTGCCAGGCCTGCCGTTGACGCCACCATGACGCCAGACAGCTCTACCACCCTGTGCTCGTCCA
TCCACACGCATCCGTCGTCGATATGCAGCTGCACCATGCCGCCACCACTCGTCGTCAATGACGCGGTAGATACAACGCCG
CACCACCTGGCAACCTCCACACCATCGCCACTGCTGGAGCTACTCGGAGCCCACCATCCACAACATCTCTCCCCCGAACA
GCAGTTCCTCCCAAGACGGCGCCTCCATGGAGGATACGACGCGCAGGACGCCGCCGTCGCCCAATCCAGACTGAATTTTG
GACTTTTGTCCGGGAGGGGTTCGGGGGTGGATAGGGGGGGACCTCGGCTTCGCCTCCAGGAAGGGTAACAGCGTCAAGTG
ACGTCGCCGATGCCGGGCCGAACACGCCGACCAAAGTTTCCTCCGGTCCCCATCCTGTGCCACCAAACCTCCGTGTACTC
CGGATCCGGCAAGCCACGATCCGAAACCCGCGAAGATGAAAGAGCCATGGGGCTCAACCCACCAGAAAGGAGGATCGAGA
AGAACTCCTTGTAGATCTCCAGACGCCGA---------------------------------------------------
---ATCCAACGATCCGACGTGGCCAGCGTCGATCATCACCACCCCGCGGCGGCCGACGGAGTCCGAAGAAAAGATCCAGA
TGGATCCGATCTGGATCCGGCGGCACCCGCGACCACCGGTCAGGCCAACGCAGCCACCA-CCTCACGACACGCAGGTCGC
CACCGCCGCGCCGCGCACGACGCCGATGGGAGACCCGCCCGCCACGCCGCCGGACCCCACGTTCACCCGGCGTTCCTCTG
GATCTCGCTGTCCCGCGCCAGCCAAGACGGAGAGGAC-GGGAGAAGCCCCGCTGCCGCCCAGCCGGCCAGGCTTCGTCCG
GCGGCGCTATGGACGGCGGCGAGGAGGGGG--AGAGGAGGAGGAGACTCGAGGGGCGGCGGCTAGGGTTTTC-CCCCGGG
TCGCCCGCGGGGGCGACGCGAGGGGCG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>SNPs
-------------------S-----------------------------------------S--S---------------
------------------------------------------------------------S-------------------
------------------------------------S----------S------S-----------S--S----------
-----------------------------SS-----------------------------------S-------------
--------S--------S--------------------S---S---S--SSS------------------S-------S-
---S-------------S-------S-----------------------------------S-----S-----S------
S--------SS-------------------------S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS---S-------S--------------S----------SS-SSSSSSSSSSSSS--------------
------------------------------------------------------------------S-S----SS-----
--------------------------------------------------------------------------------
S-------------------S-----------------------------------------------------------
---------------------------------------------S--S-------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
----------------------------------------S----S----------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
---------------------------------------S----------------------------S-----------
-----------S----------S---S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
------------------SS------------------SS----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
----------------------------SSSS---S---------------------------------S----------
---------------------------------------------------------------S---------S------
---------------------------------------S-----S----------S-----------S-----------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>forward_208
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GGGTAGCATGATGGTCGAGG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>reverse_1467
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TCCGCGAAGATGAAAGAGCC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
