>input_sequence_82698
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------------------------------------------ATGCGGGCGATCTCGTCGGCGGCGGGAGGGATGCTGCG
GGCGCGGCTGAGCGCGGCGGCGCGCCTCCGCGGCGGGCACGGCGACGGCGGTGGCCGCTGGACGACGCCCGGCCACGAGG
TGCGGCCCAAGGGGTACCCGATGAACCGCACGCCGCCGCCGCCGGGCGAGTCGCGCAAGTGGGAGGACTGGGAGCTCCCC
TGCTACGTCACCTCCTTCCTCACCGTCGTCATCCTCGGCGTCGGGCTCAACGCCAAGCCCGACCTCACCCTCGAGACCTG
GGCGCACCACAAGGCGCTCGAGCGCCTCCAGCAGCAGGAGCTCGCCGCCGCGTCCGCCTCCGCCGACGCCCTGTCAGAGT
GA------------------------------------------------------------------------------
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---------------------------------------------------
>chr5A_1_TraesCS5A01G264300
CGATCCAATCCCAAACAGCATGATGTACTCATTTCTGCTGTCTGCATATATGAAGGAGATTGCCTGGCTTGGCTGTGTTC
TGGGCTTGAATTCAAGACTGTAG-AGCTGATTC-GTGTGAGCCGATTTGCACTTGTCAGTACTTATTCAAGTGAACCTTC
CACCTAAAATGGACGAATAATGAAGTTTAGTATGCTGT----GTTTGAAAGAGCTGATCAATGGCTTGTGTTTTGTCCTA
TTTTTTTTTTTCATGCTTCAGAATCATTTCTCCCCTATCAAAAGCCAGGTCAAGTAGATGGAGCTATTATCCATTTTTCA
GATGTGAGCGTAGAAGTTTCTAGAAGTTTTTG--CTGATATATTGACAAAGGAATTTCTTATCAGTATTTGAGA-TTAAC
AACACATGTTGTACAATAGTTTT-GTGGAAGAAATAT-GCCGGCTTTATTAAATCATGACTCGCAAAAGAGCAGCCGTAG
TACCAAGGTG-AAGAGGCGACCAAAATCTAGGAGATAATTTACATATGTAGCTATTTTTTGTAAAACAATCTTAAAGCAT
ATTCTCGTACATTTTTACATATATAAAGTTCTTAAAAAAATTTGGAGAGGGTAGAGCTATAGTAACTAAGTGAACAACCC
GACTAAATGTACTGTAGTAAATGGCACACAAATCTAATATTGAAAAA--ATATGCTTGAAGCATATTCACATCTCATTTG
GAGAGGGAATTCTCATA----------------------TTTTTTTCGGCAGTCCTTAGTGACAATATTACTTTTTTTTG
AGAGAAT---------------------------AGTGACAATATTACTTGCTACGG------TCCAACCTCCGGCCCAC
TAAAGATCACCC-ACTTCTTCATAGTGTAGCCCAA--CACTGACCAAGTCCAGCCCACTTACACCACTCTCTGCAGCGTG
-AGCGTCCACACCCCAGCCAGCA---TCGTCTCCGCAGATCAGCAGCCCCCAAATCGGCGACCCCT------CTCTCCGA
TCTCCAATCCTCCACCTCGCACACACGCACCAACCGGGCACGATGCGGGCGATCTCGTCGGCGGCGGGAGGGATGCTGCG
GGCGCGGCTGAGCGCGGCGGCGCGCCTCCGCGGCGGGCACGGCGACGGCGGTGGCCGCTGGACGACGCCCGGCCACGAGG
TGCGGCCCAAGGGGTACCCGATGAACCGCACGCCGCCGCCGCCGGGCGAGTCGCGCAAGTGGGAGGACTGGGAGCTCCCC
TGCTACGTCACCTCCTTCCTCACCGTCGTCATCCTCGGCGTCGGGCTCAACGCCAAGCCCGACCTCACCCTCGAGACCTG
GGCGCACCACAAGGCGCTCGAGCGCCTCCAGCAGCAGGAGCTCGCCGCCGCGTCCGCCTCCGCCGACGCCCTGTCAGAGT
GATCCGCGCGCGGGCGCCCCAGGTCTTCCTCGAAACCTAGGTTGCTTCTGTTCTGTTTTGATTCCAATAAGGGTTGGTTG
TGAACTTGTGATGTACCAATCTGATATTGATGGGACCTGGGCTGAACATTATGTTTCTGTTTCTGTTTTGTTGTTAAAAT
TTATCTGATGATGATGGCAGATGCCGTATACATTTCCAAATGCCCTGTCCCTA----AAATATTTTGGAATGTCTCGGCA
TTGTATTATCTTGTGCGTCCCTTTTTTATTTCCTTGGTCATAATTTGCTACATGCTTTCGGGAGCGTAATTAGGACTGAT
TATACCTGTCTCTCTTCGCCTGATATGACTTGTTGCAGAAAATGAATAAATCAGTTGTCGCATTGAACAGCTTGAAATGT
TGCTTGCTTGTTAGAACTTACAGGTGATGCTTGCTTTTAGA-GGGCTTGGGTATTGTCTCTCTTCCTTTTCTTTTCCAAT
GATGAGTGGACACTCTGTCGATAGAAGAAAGGTTACACGTGATATGTTACTTCAGTAAATGATCAGGCCCTATCTTTATA
AAAGATACAGGTAAATAGTATGTGTAGATTACTAAATGAAATTCGAGTCTTAGGATATGCTGTAAGCTTGGCCTTTATTT
CTACT---TGATAAAATATGAACAATTAGTTGAGTTTGTGTGATTGAAGTAGAGT-TTGTTTGAACATTTGTTGCAAATT
GTGATGAATCATTTTGTGTAACTCAAAGAGTTAAAATAGATACCATGAACAGTTGCACACTTGAATTTTGCTGATCCTGT
GAAGGATGTATAACCCCATTCTATTTCTTGACACCATGGTTGGTGGTAAAATTGCTCTGGTTATTGGATTAGTAGCTAGT
TAGGCGTGATAGTAAAGTCAGCAGGAATAACTTTGCACTATGTCTACTATAGTTATTTTCTTTTTTTATTCATACTTCCC
AGAGCTTATAAATGCATTGATTTGTTTCATGTCAACTCGGCTATCAATTGT
>chr5D_1
CGATCCAATCCCAAACAGCATGCTTTACTGATTTCTGCTGTCTGCATGTATGGAGAG---TCCCTGTCTTGGCTGTGTTC
TGAGCTTGAATTCAAGACTGTAGAAGCTGAGTC-ATGTGAGCCGATTTGCACTTGTCAGTACTTGTTCAAGTGAACCTTC
CACCTAAAGTGGACGAATGATGAAGTTTAGTATGCTGTGACAGTTTGAGAGAGCTGATCAATGGCTTGTGTTTTGTCCTA
TTAG--TTTTTCATACTCCAGAATCATTTCTCCCCTAACAAAAGCCAGGCCAAGTAGATGGAGCTATCATTCATTTTTCA
GATTTGAGCGTAGAAGTTTCTAGAAGTTTTTG--CTGATATATTGACAAAAGAATGCCTTAGTATTTTTTTTTGAGAGAA
TTTCATGTC--------AGTTTTTGTTTAAGAAATATGGCAGTCTTTATTAAATCACGACTTGCAAAAGTACAGCTGCAG
TAATTAAGTGAAAGAACCGACCAAAATCTAG-AAATAATTCACATAGCTATTA---------AAAAAAATCTTAAAGCAT
ATTCTCGTCTATATATATATATAACACATAGCTTTTCTTTTGGGGGGAATGAC---------------------------
-----------------------ACACACATAGCTAATATTAAAAAA--ATATGCTTGAAACATATTCTCATCTCATTTG
GAGAGGAAATTCT-ATG----------------------TTTTTTTCGGCGGTCCCTTTTAGAACTAGTCCATATTTCTT
TGAAAATATACTCGCTAC--------------------------------------------TTCCAACCTCCGGCCCAC
TAAAGATCACCCCACTTCTTCCTAGCATAGCCCAA--CACTGACCAAGTCCAGCCCACTTACACCACTCTCTGCACTCTG
CAGCGTCCACACCCCAGCCAGCCTCCTCGTCTCCGCAGATCAGCAGCCCCCAAATCGGCGACCCCTC----TCTCTCCGA
TCTCCAATCC-CCACCTCGCACACGCGCACCAACCGGGCACGATGCGGGCGATCTCGTCGGCGGCGGGAGGGATGCTGCG
GGCGCGGCTGAGCGCGGCGGCGCGCCTCCGCGGCGGGCACGGCGACGGCGGGGGCCGGTGGACGACGCCCGGCCACGAGG
TGCGGCCCAAGGGGTACCCGATGAACCGCACGCCGCCGCCGCCGGGCGAGTCGCGCAAGTGGGAGGACTGGGAGCTCCCC
TGCTACGTCACCTCCTTCCTCACCGTCGTCATCCTCGGCGTCGGGCTCAACGCCAAGCCCGACCTCACCCTCGAGACCTG
GGCGCACCACAAGGCGCTCGAGCGCCTCCAGCAGCAGGAGCTCTCCGCCGCCTCCGCCTCCGCCGAAGCCCTGTCCGAGT
GATCCGCGAGCGCGCGCCCCAGGTCTGCCTCCAAACCTAGGTTGCCTCTGTTCTGTTTTGCTTCCAATAAGGA-TGGTTG
TGAACTTGTGATGTACCAATCTGATATTGATGGGACCTGGGCTGAACACTATATTTCTGTTTCTGTTTTGTTGTTGAAAT
TTATCTGATGATGATGGCAGATGCCGTATGCATTTCCAAATGCCCTGTCATGTCCCTAAACATTTTGGTTTGTCTCGGCG
TTGTATTATCTTGTGTATCCCTTATTTATTTCCTTGGTCATAATTTGCCACATGCTTTCGGGAGCGTAATTAGTATTGAT
TATACCTGTCTCTCTTCGCCTGAAATGCCTTGTTGCAGAAAATAAATAAATCAGTTGTCGCATTGAACAGCTTGAAATGT
TGCTTGCTTGTTAGAACTTACAAGTGAACCTTGCTTTTGGA-GGGCTTAGGTATTGTCCCTCTGCCTTTTCTTTTCCAAT
GATGAGTGGACATTCTCTCGATAGAAGAAAGGTTACACGCGATATGTTACTTCAGTAAATGATCAGGACCTATCTTTATA
GAAGAGACAGATAAATAATATGTGTAGATTACTAAAT-AAATTTGAGTCTTGGCACGTGCTGGAAGCTTGGCCTTTATTT
CTACT---AGATAAAATATGAACAGCTTGTTGAGCTAATGTTATTAAAGTAGAGTATTGTTTGAACATTTGTTGCAAATT
GCGATGAACCATGTTGTGTAAATC--AGAGTTAAAATAGATATCATGAACAGTTACACACTTGAATTTCGCTGATCCTGT
GAAGGATGTGTAATCCCATTATATTTCTGGACACCATGGTTGGTGGTAAATTTGCTCTGGTTATTGGATTAGGAGCTAGT
TAAGCGTGATAGAAAGTCAGGA--GAATAACTTTGCACTATATCTACTGCAGTTATTTTCTTTTTTG-TTCATACTTCGC
AGAGCTTATAAATGCATTGATTTGTTTCATGTCAA----------------
>chr5B_1
CGATCCAATCCCAAACAGCATGCTGTACTCATTTCTGCTGTCTGCATATATGGAGGAGATTCCCTGGCTGGGCTGTGTTC
TGTTCTTGAATTCAAGACTGTAA-AGCTGATTCAATGTGAGCCGATTTGCACTTGTCAGTACTTGTTCAAGTGAACCTTC
CACCTAAAATGGACGAATATTGAAGCTTAGTATGCTGTGGCAGTTTGAAAGAGTTGATTAATACCTTGTGTTTTGCCCTA
----TTTTTGTCATACTCCAGAATGATTTCTCCCCTATGAAAAGCCAAGTCAAGTAGATGGAGCTATCATCCATTTTTCA
GATGTGAGCGTAGAAGTTTCTAGAACTTTTTTTACTGATATATTGACAAAGGAATTTCTTATCAGTATTTGAGATTAACT
AACATCTGTTGCACAGTAGTTTTTGTTGAAAAAATATGGCCAGCTTTATTAAATCGCGACTCGCAAAAGAACAGCCGTAG
TACCAAGGTG-AAGAGCCGACCAAAATCTAGGAAATAATTCACATGTGTAGCTATTTTTTATAAAACAATCTTAAAGCAT
ATTCTTGTGCATTTTTACATAT--AAAGTTCTTAATTTT-TTTGGAGAGGGTAGAACTATAGTATCTGAGTGAACAACCC
GAGTAAATGTACTGTAGTAAATGACACACAAATCTAATATTGAAAAAACATATGCTTGAAGCACATTCACATCTCATTTG
GAGAGGGAATTCTCATCTTTTTTTTGGCAGTCCTTAGTTTTTTTTTCGGCAGTCCTTAGTGAAAATATTACTTTTTTTTA
GACAAAGTGAAAATATTACTTTTTTTTAGAAATAAGTGAAAATATTACTTGCTACTACTACGTTCCAACCTCCGGCCCAC
TAAAGATCACCC-ACTTCTTCATAGCGTAGCCCAACTCACTGACCAAGTCCAGCCCACTTACACCACTCTCTGCACTCTG
CAGCGTCCACACCCCAGCCAGCCTCCTCGTCTCCGCAGATCAGCAGCCCCCAAATCGGCGACCCCTCGCTCTCTCTCCGA
TCTCCAATCCTCCACCTCGCACACGCGCACCAACCGGGCACGATGCGGGCGATCTCGTCGGCGGCGGGAGGGATGCTGCG
GGCGCGGCTGCGCGCGGCGGTGCGCCTCCGCGGCGGGCACGGCGACGGCGGGGGCCGCTGGACGACGCCCGGCCACGAGG
TGCGGCCCAAGGGGTACCCGATGAACCGCACGCCGCCGCCGCCGGGCGAGTCGCGCAAGTGGGAGGACTGGGAGCTCCCC
TGCTACGTCACCTCCTTCCTCACCGTCGTCATCCTCGGCGTCGGGCTCAACGCCAAGCCCGACCTCACCCTCGAGACCTG
GGCGCACCACAAGGCGCTCGAGCGCCTCCAGCAGCAGGAGCTCGCCGCCGCCTCCGCCTCGGCCGACGCCCTGTCCGAGT
GATCCGCGCGCGCGCGCCCCAGGTCTTCCTCCAAGCCTAGGTCGCTTCTGTTCTGTTTTGCTTCCAATAAGGGTTGGTTG
TGAACTTGTGATGTACCAATCTGATATTGATGGGACCTGGGCGGAACACTATATTTCTGTTTCTGTTTTGTTGTTGAAAT
TTATCTGATGATGATGGCAGATACCGTATGCATTTCGAAATGCCCTGTGGTGTCCCAAAC-ATTTTGAAATGCCTCTGCA
TTGTATTGTCTTGTGTATCCCTTATTTATTTCCTTGGGCATGATTTGCTACATGCTTTTGCGAGCGTAATTAGGACCGAT
TGTACCTGTCTCTCTTTGCCTGAAATGACTTGTTGCAGAAAATAAATAAATCAGTTGTCGCATTGAACAGCTTGAAATGT
TGCTTGCTTGTTAGAACTTACAAGTGATGTTTGCTTTCGGGGGGGCTTGGGTATTGCCTCTCTCT-TTTTCTTTTCCAAT
GATAAGTGGACATTCTCTCAATAGAAGAAAGGTTACACGCAATGTGTTACTTCAGTAAATGATCAGG-------------
------------------------------------------------CTTAGCACATACTGTAAGCTTGTTCTTTATTT
CTACTACTTGATAAAATATGAACAATTGGTTGGGTTGGTGTGATTGAAGTAGACTGTTGTTTCTACATTTGTTGCAAATT
GTGATGAATCATGTTGTGTAACTC--AGAGTTAAAATAGGTACCATGAACAGTCATGCACTTGAATGTTGCTGATCCTTA
GAAGGATGTATGATCCCA-TCTATTTCTTGGCAGCATGGTTGGCGGTAAAATTGCTCTGCTTGTTGGATTAGTAGCTAGT
TAGGTGTGATAGAAAATCAGGA--GG------------TATATCTACTGCAGTTATTTTCCTTTCTG-TTCATACTTTGC
AGAGCTTATACATGCATTGATTTGTTTCATGTCAACTAGCCTATCAATT--
>SNPs
----------------------S-----------------------------S--------S------------------
--S-------------------------------S-----------------------------S---------------
--------------------------------------------------------------------------------
--SS----------S--S-------------------------------------------------S------------
----------------------------------------------------------------------------S--S
----SS-----S---S----------S-----------------------------S-------------S---------
----------------S----------------S------S-------------------S-------------------
--------S--------------S-----------SSSSS---------------S--------S--S------------
--S--------------------S--------------------------------------------------------
----------------S---------------------------------------------S----------------S
S--S-----------------------------------S---------------SS-----------------------
-------------------------S-------------------------------------------------SSS--
----------------------S---------------------------------------------------------
------------------------S-------------------------------------------------------
---------------------------------------------------S----------------------------
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---------------------------------------------------S-----------------------S----
------------S------------------S----------------------------S-------------------
------------------------------------------------S---S----------------------S----
-----------------------------S-------------------SSSS-------S-------------------
---------------SS------S--------------------------------------------------------
-----------------------S-------------------S------------------------------------
----------------------S---------------S------------------------S----------------
------------S---S----------------------S---------------------------S------------
S----S----S------S-------------------S-----S---------S-S------------------------
---------------------------S--------S-------------------------------------------
------------S-----------SS----------------------------S-------------------------
-------------S------------------------------------------------------------------
------------S---SSSS-SSS-----------------S------SS----------------SS----------S-
-------------------------------------S-S---------SS
>forward_958
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----------------------------------------------------------TTACACCACTCTCTGCAGCG--
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>reverse_1879
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--------------------------------------AGAGGGCTTGGGTATTGTCTC---------------------
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---------------------------------------------------
