>input_sequence_82671
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------------------------------------------------------------ATGGGTGTCACTGGTTTGGT
GTTGGTGTTGTCTTTGTCGGTTATGGTGGTATCCAGCAAAGACTGGATCGTTGGCGATGGGAAGGGATGGACCTTCGGTG
TATCTGGTTGGGAAAAGGGTAAGATATTTGTTAGAGATGACTACCTCATCTTCAACTATAAACCAAAGATGCACAATGTT
TTGGAGGTTGCCACATCCGAGTACAAGGCGTGCGACATCAACGCCATCCCCTCTAGAAACTTTACCTCGGGACATGACCG
TGTCCAGCTCGTTGGTGTTGTGGCCTCCTACATATGCGGCACTCCCGGACACTGCGGTAGGGGTATGAAGATCCACATGG
CCATCGAAGATAAGGAATGA------------------------------------------------------------
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>chr2D_1_TraesCS2D01G190100
GATCGCCGAGTGACCAAGTTTGTGAAGGTTCGGAAGTCACCTGAAGACTTACCACGAGTGATTGGGCGAGGTCTGTGTGA
CCTTAGCTCAAGGAGAATACGGTGAGGACTGTGTGTCCAGGACTGTGTGTCCTCGGGTTTAAATACCTAGCCGCTCCAAC
CAGATGTACAACTGAGACAGCAGTTCGAACTGGTCTACCAAATCATTGTCTTCACCAAGCTTACTGGTTCTATTTCCTCA
ACTCTTTCATTTCCTCATTACAGTTGTTGTGTGCCTGTTCATATC--TGTTTGAAGACTTTGACTGAAGACTTTCTCAAT
TTCCTCAGTTCAATTTCTTCAGTCTGTTTGTCTTCATCCTGTGTTATCCCGTGATTATGCTTTCTGTACTCTGTGCTTGT
CTTCATTTTATCATGATGACCATGCTTATGTTATGTTATGTTTACTTCTGAGTACTTATTCCGCTGCAAGTAGTTCTTCG
CTAAGGAATTTCCTCACCTGCAAATTCCTCAGTGAAGAATTCATAAAA-ATCGCCTATTCAC--CCCCCTCTAGTCGATA
TAATGCACTTTCAAATCTCTACAAAGAGTTATATTTAGGCACAGAGGGAGTAGTACATCATTACCATTTAATGCATAACA
TGCATAATTAAT-ACCAATCTTTTAAGCCATGTGATGTCACCATTTAATGCATAACAT--------------GCATCATT
ACCATTTAATGCATAATATACATATATATTAGTAACATTTACTGGATTAATTAATGAATATGTATATCACTTCGTCAAAG
AATCTGGTTTTCACTGGTGATATCACATCATATTTATGCGGATGATGGCAACATCCAACCCCACTTTCATAGGTCCACAC
TATAAATAAGAGGACATCATCCTTCATTTGTCAAGAAAACTCAAACCATATACAAGACCTAATATTGTTTTCATATTCTT
TGATCTCTAGAGTAAACTAGATTTAAGGGTTGGTTGCATATATTGATGGCATGTGCAAGCATGGGTGTCACTGGTTTGGT
GTTGGTGTTGTCTTTGTCGGTTATGGTGGTATCCAGCAAAGACTGGATCGTTGGCGATGGGAAGGGATGGACCTTCGGTG
TATCTGGTTGGGAAAAGGGTAAGATATTTGTTAGAGATGACTACCTCATCTTCAACTATAAACCAAAGATGCACAATGTT
TTGGAGGTTGCCACATCCGAGTACAAGGCGTGCGACATCAACGCCATCCCCTCTAGAAACTTTACCTCGGGACATGACCG
TGTCCAGCTCGTTGGTGTTGTGGCCTCCTACATATGCGGCACTCCCGGACACTGCGGTAGGGGTATGAAGATCCACATGG
CCATCGAAGATAAGGAATGATATTTAGATTATCGAAAATATGTTTTTAGGGTAAT--AAAAATATGTTTGTGGGTACATG
TATGATGGAAGAAATAACTCCGATATGACTTCTTTGCTACACTTATGTGTCATCCTTTCTCATACCAATTTATATTCGGA
AATGATAAGTACCCGGCGTCAGGTACAAGCACATGGCAAATCGATCGTTTTCGATACTAAGTTTAATGACGCAATAAAAA
TAAATAAACTGAAGCATGAAGTTGTCATGCTTGCCAACTAAAGCCGACATCCTCGCGTCATTAAACTTGCCATCGAAAAC
ATTTGATTAGCCATGTACTCGAACCTGAAGGGCATTATCAGATTCCTTTATACTCCCTATAAGGAAGTAGTTTCTTAATT
TCAGCCCCTACCCTGACAGCGTGTTTGGTTTGTGGAAATTAGAGATGGGGAATGAGAGTTGAGGGAGGGATGTGGAGATT
AAAAGTCCACTCATTGATTAGAGTGAATGGGAGTTTGAGTAGGAAAAGAAATGAAGAGGACACCAACTCCCACCATTTTT
TCCCCACGGGGTATGTTGTTAATTTGTGGGTAGAGTTTCACCCCATGCTAATTTCCATCGTAAACCAAACAAGTAAATGG
AAATAAAAATTTACTTTTCATGTCTAGTCCCTTCATGAACTCCCTGGTGCAAGCTTCAGTTTCCCTGCTCAATTGAGTCC
CTGAGCAGTTTCGATTGATTACTAAACAGTCGGGATGGGAATGGCCGGGTCGGCCTGCCGGGTCGCTGACCCGCCCCGAA
AAGTTGAGGCCAATGGGCCGTGTGGATCGGCCTCGAACCATAGTTGGGTCAGTGGAGCCGGCACTGACTGACCCAATGGG
TCAGCAGGGTCGACCCACCTCCAAGGCGTGAATTAGCAGCTAGTTACTCGGGCATGTGTTTTGTTGCAGTGGAGTCGTTA
GTTCGTTAGTGCCCGCGGGCGTAGCTAGCTAATTCCTTTGAATGTGTAACGTGCATGCATGT
>chr2D_1
GATCGCCGAGTGACCAAGTTTGTGAAGGTTCGGAAGTCACCTGAAGACTTACCACGAGTGATTGGGCGAGGTCTGTGTGA
CCTTAGCTCAAGGAGAATACGGTGAGGACTGTGTGTCCAGGACTGTGTGTCCTCGGGTTTAAATACCTAGCCGCTCCAAC
CAGATGTACAACTGAGACAGCAGTTCGAACTGGTCTACCAAATCATTGTCTTCACCAAGCTTACTGGTTCTATTTCCTCA
ACTCTTTCATTTCCTCATTACAGTTGTTGTGTGCCTGTTCATATC--TGTTTGAAGACTTTGACTGAAGACTTTCTCAAT
TTCCTCAGTTCAATTTCTTCAGTCTGTTTGTCTTCATCCTGTGTTATCCCGTGATTACGCTTTCTGTACTCTGTGCTTGT
CTTCATTTCATCATGATGACCATGCTTGTGTTATGTTATGTTTACTTCTGAGTACTTATTCCGCTGCAAGTAGTTCTTCG
CTAAGGAATTTCCTCACCTGCAAATTCCTCAGTGAAGAATTCATAAAA-ATCGCCTATTCAC--CCCCCTCTAGTCGATA
TAACGCACTTT---------------------------------------------------------------------
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>chr2D_1
GATCGCCGAGTGACCGAGTTTATGAAGGTTCGGAAGTCACCTGAAGACTTACCACGAGTGATTGGGCGAGGTCTGTGTGA
CCTTAGCTCAAGGAGAATACGGTGAGGACTGTGTGTCCGGGACTGTGTGTCCTCAGGTTTAAATACCTAGCCGCTCCAAC
CAGATGTACAACTGAGACAGCAGTTGGAACTGGTCTACCAAATCATTGTCTTCACCAAGCTTACTGGTTCTATTTCCTCA
ACTCTTTCATTTCCTCATTACAGTTGTTGTGTGCTTGTTCATATC--TGTTTGAAGACTTTGACTGAAGACTTTCTCAAT
TTCCTCAGTTCAATTTCTTCAGTCTGTTTGTCTTCATCCTGTGTTATCCTGTGTTTATGCTTTCTGTACTCTGTGCTTGT
CTTCATTTCATCATGATGACCATGCTTGTTTTCTGCTATGTTTACTTTTGAGTACTTATTCCGCTGCAAGTAGTTCTTCG
CTAAGGAATTTCCTCACCCGCAAATTCCTCAGTGAAGACTTCATAAAAAATCGCCTATTCAC--CCCCCTCTAGTCGATA
TAACGCACTTTCA-------------------------------------------------------------------
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>chr2D_1
GATCGCCGAGTGACCGAGTTTGTGAAGGTTTGGAAGTCACCTGAAGACTTACCACGAGTGATTGGGCGAGGTCTGTGTGA
CCTTAGCTCAAGGAGAATACGGTGAGGACTGTGTGTCCGGGACTGTGTGTCCTCAGGTTTAAATACCTAGCCGCTCCAAC
CAGACGTACAACTGAGACAGCAGTTGGAACTGGTCTACCAAATCATTGTCTTCACCAAGCTTACTGGTTCTATTTCCTCA
ACTCTTTCATTTCCTCATTACAGTTGTTGGGTGCCTGTTCATATC--TGTTTGAAGACTTTGACTGAAGACTTTCTCAAT
TTCCTCAGTTCAATTTCTTCAGTCTTTTTGTCTTCATCCTGTTTTATCCCGTGTTTACGCTTTCTGTACTTTGTGCTTGT
CTTCATTTCATTATGATGACCATGCTTGTGTTATGTTATGTTTACATCTGAGTACTTATTCCGCTGCAAGTAGTTCTTCG
CTTAGGAATTTCCTCACCCTGAAATTCCTCAGTGAAGAATTCATAAAA-ATCGCCTATTCAC---CCCCTCTAGTCGATA
TAACGCACTTTCAA------------------------------------------------------------------
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>chr4D_1
GATCGCCGAGTGACCGAGTTTGTGAAGGTTCAGAAGTCACCTGAAGACTTACCACGAGTGATTGGGCGAGGTCTGTGTGA
CCTTAGCTCAAGGAGAATACGGTGAGGACTGTGTGTCCGGGACTGTGTGTCCTCAGGTTTAAATACCTAGCCGCTCCAAC
CAGATGTACAACTGAGACAGCAGTTGGAACTGGTCTACCAAATCATTGTCTTCACCAAGCTTACTGGTTCTATTTCCTCA
ACTCTTTCATTTCCTCATTACAGTTGTTGTGTGCTTGTTCATATC--TGTTTGAAGACTTTGACTGAAGACTTTCTCAAT
TTCCTCGGTTCAATTTCTTCAGTCTGTTTTTCTTCATCCTGTGTTATCCTGTGTTTACGCTTTCTGTACTCTGTGCTTGT
CTTCATTTCATCATGATGACCATGCTTGTGTTCTGCTATGTTTACTTTTGAGTACTTATTCCGCTGCAAGTAGTTCTTCG
CTAAGGAATTTCCTCACCCGCAAATTCCTCAGTGAAGAATTCATAAAA-ATCGCCTATTCACCCCCCCCTCTAGTCGATA
TAACGCACTTTCA-------------------------------------------------------------------
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>chr4D_1
GATCGCCGAGTGACCGAGTTTGTGAAGGTTCGGAAGTCACCTGAAGACCTACCACGAGTGATTGGGCGAGGTCTGTGTGA
CCTTAGCTCAAGGAGAATACGGTGAGGACTGTGTGTCCGGGACTGTGTGTCCTCAGGTTTAAATACCTAGCCGCTCCAAC
CAGATGTACAACTGAGACAACAGTTGGAACTGGTCTACCAAATCATTGTCTTCACCAAGCTTACTGGTTCTATTTCCTCA
ACTCTTTCATTTCCTCATTACAGTTGTTGTGTGCTTGTTCATATC--TGTTTGAAGACTTTGACTGAAGACTTTCTCAAT
TTCCTCAGTTCAATTTCTTTAGTCTATTCGTCTTCACCCTGTGCTATCATGTGTTTACGCTTTCTGTACTCTGTGCTTGT
CTTCATTTCATCATGATGACCATGCTTGTGTTCTGTTATGTTTACTTTTGAGTACTTATTCCGCTGCAAGTAGTTCTTCG
CTAAGGAATTTCCTCACCTGCAAATTCCTCAGTGAAGAATTCATAAAA-ATCGCCTATTCAC--CCCCCTCTAGTCGATA
TAACGCACTTTCAA------------------------------------------------------------------
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>chr7D_1
GATCGCCGAGTGACCGAGTTTGTGAAGGTTCGGAAGTCACCTGAAGACTTACCACGAGTGATTGGGCGAGGTCTGTGTGA
CCTTAGCTCAAGGAGAATACGGTGAGGACTGTGTGTCCGGGACTGTGTGTCCTCAGGTTTAAATACCTAGCTGCTCCAAC
CAGATGTACAACTGAGACAGCAGTTGGAACTGGTCTACCAAATCATTGTCTTCACCAAGCTTACTGGTTCTATTTCCTCA
ACCCTTCCATTTCCTCATCACAGTTGTTGTGTGCTTGTTCATATC--TGTTTGAAGACTTTGACTAAAGACTTTCTCAAT
TTCCTCAGTTCAATTTCTTCAGTCTGTTTGTCTTCATCTTGTGTTATCCTGTGATTACGCTTTCTGTACTCTGTGCTTGT
CTTCATTTCATCATGATGACCATGCTTGTGTTCTGTTATGTTTACTTTTGAGTACTTATTCCACTGCTAGTAGTTCTTCG
CTAAGGAATTTCCTCACCGGCAAATTCCTCAGTGAAGAATTCATAAAA-ATCGCCTATTCAC--CCCCCTCTAGTCGATA
TAACGCACTTTCAA------------------------------------------------------------------
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>chr7D_1
GATCGCCGAGTGACCGAGTTTGTGAAGGTTCGGAAGTCACCTGAAGACTTACCACGAGTGATTGGGCGAGGTCTGTGTGA
CCTTAGCTCAAGGAGAATACGGTGAGGACTGTGTGTCCGGGACTGTGTGTCCTCAGGTTTAAATACCTAGCTGCTCCAAC
CAGATGTACAACTGAGACAGCAGTTGGAACTGGTCTACCAAATCATTGTCTTCACCAAGCTTACTGGTTCTATTTCCTCA
ACCCTTCCATTTCCTCATCACAGTTGTTGTGTGCTTGTTCATATC--TGTTTGAAGACTTTGACTAAAGACTTTCTCAAT
TTCCTCAGTTCAATTTCTTCAGTCTGTTTGTCTTCATCTTGTGTTATCCTGTGATTACGCTTTCTGTACTCTGTGCTTGT
CTTCATTTCATCATGATGACCATGCTTGTGTTCTGTTATGTTTACTTTTGAGTACTTATTCCACTGCTAGTAGTTCTTCG
CTAAGGAATTTCCTCACCGGCAAATTCCTCAGTGAAGAATTCATAAAA-ATCGCCTATTCAC--CCCCCTCTAGTCGATA
TAACGCACTTTCA-------------------------------------------------------------------
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>chr5D_1
GATCGCCGAGTGACCGAGTTTGTGAAGGTTCGGAAGTCACATGAAGACTTACCACGAGTGATTGGGCGAGGTCTGTGTGA
CCTTAGCTCAAGGAGAATACGGTGAGGACTGTGTGTCCGGGACTGTGTGTCCTCAGGTTTAAATACCTAGCCGCTCCAAC
CAGATGTACAACTGAGATAGCAGTTGGAACTGGTCTACCAAATCATTGTCTTCACCAAGCTTACTGGTTCTATTTCCTCA
ACTCTTTCATT-CCTCATAACTG-TGTTGTGTGCTTGTTCATATCTGTGTTTGAAGACTTTGACTGAAGACTTTCTCAAT
TTCCTCAGTTCAATTTCTTCAGTCTGTTTGTCTTCATCCTGTGTTATCCTGTGATTACGCTTTCTGTACTCTGTGCTTGT
CTTCATTTCATCATGATGACCATGCTTGTGTTCTGATATGTTTACTTTTGAGTACTTATTCCGCTGCAAGTAGTTCTTCG
CTAAGGAATTTCCTCACCTGCAAATTCCTCAGTGAAGAATTCATAAAA-ATCGCCTATTCAC--CCCCCTCTAGTCGATA
TAACGCACTTTCAA------------------------------------------------------------------
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>chr6D_1
GATCACCGAGTGACCGAGTTTGTGAAGGTTCGGAAGTCACCTGAAGACTTACCACGAGTGATTGGGCGAGGTCTGTGTGA
CCTTAGCTCAAGGAGAATACGGTGAGGACTGTGTGTCCGGGACTGTGTGTCCTCAGGTTTAAATACCTAGCCGCTCCAAC
CAGATGTACAACTGAGACAACAGTTGGAACTGGTCTACCAAATCATTGTCTTCACCAAGCTTACTGGTTCTATTTCCTTA
GCTCTTTCATTTCCTCATTATAGTTGTTGTGTGCTTGTTCATATC--TGTTTGAAGACTTTGACTGAAGACTTTCTCAAT
TTCCTCAGTTCAATTTCTTCATTCTGTTTGTCCTCATCCTGTGTTATCCTGTGTTTATGCTTTCTGTACTGTGTGCTTGT
CTTCATTTCATCATGATGATCATGCTTGTGTTCTGTTATATTTACTTTTGAGTACTTATTCCGCTGCAAGTAGTTCTTCG
CTAAGGAATTTCCTCACCTGCAAATTCCTCAGTGAAGAATTCATAAAA-ATCGCCTATTCAC--CCCCCTCTAGTCGATA
TAACGCACTTTCAA------------------------------------------------------------------
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>chr2B_607
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---------------------------------------------------AGTACATCATTACCATTTAATGCATAACA
TGCATAATTAATAACCAATCTTTTAATCCATGTGATATC-CCATTTAATGCATAACATAACATGCATAGCATGCATCATT
ACCATTTAATGCATAATATACATATATATTAGTAACATTTACTGGATTAATTAATGGATATGTATATCACTTCGTCAAAG
AATCTGTTTTTCATTGGTGATATTAAATCACATTAATGCAGATGATGGCAACATCCAACCCCACTTTCACAGGTCCACAC
TATAAATAAGAGGACATCATCCTTCATTTTTCAAGCAAACTCAAACCATACACAAGACCTAATATTGTTTTCATGTTCTT
TGATCTCTAGAGTAAACCAGATTTAAGGGTTGGTTGCACATATTGATGGCGTGTGCAAGCATGGGTGTCACTGATTTGGT
GTTGGTGTTGTCTTTGTCGTTTATGGTGGTGTCCGGCAAAGACTAGATCGTTGGCGATGGCAAGGGATGGACCTTCGGTG
TATCTGGTTGGGAAAAGGGCAAGAAATTTGTTAGAGATGACTACCTCATCTTCAACTATAACCCAAAGATGCACAATGTT
TTGGAGGTTGCCACATCCGAGTACAAGGCGTGCAACATCAGCGCCGCCCCCTCTAGAAATTTTACCTCGGGCCATGATCG
TGTCCAGCTCTTTGGTGTTGTGGCCTCCTACATATGCGGCACTCCCGGACACTGCGGTAGGGGTATAAAGATCCACATGC
CCATAGAAGATAAGGAATGATATTTAGATTATCAAAAATATGTTTTTTAGAGTAATCAAAAATATGTTTGTGGGTACATG
TATGATGGAAGAAATAACTCTGATATGACTTCTTTGCTACACTTATGTGTCATCCTTTGTCATACCAATTTATATTCGGA
AATGATAAGTACCCGGCGTCAGGTACAAGCACATGGCAAATCGATC----------------------------------
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>SNPs
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--------S------------------S----------------------------------------------------
--------------------------------------------------------------------------------
---S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------
--------------------------S---------S--S----------------------------------------
--------------------------------------------------------S-----------------------
------S------S---------S-S----S---S----S-----------------------------S----------
-----------------------------S-----S--------------S-----------------------S-----
-----------------S--------------------S-----------S----------------------S------
-------------------S----------S---S---------S---------------S-------------------
-------------------S----S------------------------------------S------------------
---------------------------------S------S----SS------------S-----------S-----S--
----------S-------------------------------------------------------S------------S
----S----------------------------S-------------SS-SSS-S-------------------------
--------------------S-------------------------------------S---------------------
----------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_870
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------------------------------------------------CAACATCCAACCCCACTTTCAT----------
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>reverse_1767
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------CCTACCCTGACAGCGTGTTT------------------------------------------------------
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