>input_sequence_82655
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-------------------------------ATGGTACGCATCTCCGTTCACTCTCCCCCGAATCTCTCTCCCATCTGCT
TCGATTCCTCTCCCCGTGTTCCCTCCTCCATGGATCCCCGCTGACCCGTCGCCTCCAATCCGCCGCAGCCGTCGCACAAG
ACCTTCCGGATCAAGCAGAAGCTGGCCAAGAAGCAGCGCCAGAACCGCCCCATCCCCTACTGGATCCGCATGAGGACCGA
CAACACCATCAGGTACCTTCCGCCGCCATTATC-------TCCTCCCCCGGT----------------------------
TAGTAATGGATCTATGGAGAGGAGACGGCGCCCCTAAGCTGTTTCGTTGCTGTCTCAGGTACAACGCCAAGCGCAGGCAC
TGGCGCCGCACCAAGCTCGGATTCTAA-----------------------------------------------------
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>chr7A_1_TraesCS7A01G145700
GCGCAAGGTGTGGCTAGGGAAACTGTGTAGCAACTACCGGCAAGGTGGGACAAGAGGTGTGGCTGGGAGCGGTCGTGTGC
GACGGCGAGCAGCTGAGAATGCGGGAGGTGAGGCAGGACCGGACCGACGCGGATCACGACCGGTCGGCGGTGGGGATGGA
-GCGGTTATAAGGATTGCCCCCCCCCCCTCTCCTCTTTTTATGGGTTTGGCAAGTGGATTGGGAAGAATCTACTTACCCC
AACAGGTAGGGTTTTTAGTAGAAAATACGTAGGGAGAAGAGGGGAGTTTTTTGGGAGCTCCTCTCAGATT-TTTTTAGAA
CCCTTTACTTTCCAATTCTTGACAATTCAT-TAGGTGAAGGGTTGGTTCCCTTTAGACTCTCCTCGTTTTACTACACTGA
CATCCAAGAGACTCTGCA--------------------------------------------------------------
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--------------------------------------------------------------------------TTTAGT
ATATATATCTT---------------------------------------------------------------------
---------ATGTAATAAGATCTTATATTATGAGACGGAGGAAGTACATTGTAAAATCCAACCTTATAAGTATATTAGTA
CAAACGT-GTTGCATATCAAACTATTTTTATGCTAACACAGATTTTTAAAATTAACACTTAAATGCGTGAAACTGCTCTG
TAACACATGTGTGA------------------------------------------------------------------
------GTGCATGTATTTGGAACTCGGAAACAGAAAAGTTCTTGTAGTTTTTTTCTTGAATCAGGAGGAAATCGTTAATT
TTTTTTTGAGACAAAGGAAGTCGTTATTGTGAGAA-CG--GAGGAGGGAATCAGAGACGTAACATCATGAGCCCATTAAA
GCCCAGTCTCGATGTCTGTTTTCACA-AAGGAAAGAGCACAGACATAACGTTACGAGCCCATGAAAGCCCAGTTCTGTAC
GTTTGACAGATAGGCCCACCAGCAGTAGTCAGTCCAAGGA-----------------AACTAGCCGAGCCCATTAGGCCC
ATACGGCACTGCTCTCCACTATATAAGCCCTCACGGCCTCCATTTCCCCTTCCTCCGATCCAAGGGTTTCCTCGCGCCGC
CGCCGCAGCCGCCTCCGTCTCCGCCGCCACGATGGTACGCATCTCCGTTCACTCTCCCCCGAATCTCTCTCCCATCTGCT
TCGATTCCTCTCCCCGTGTTCCCTCCTCCATGGATCCCCGCTGACCCGTCGCCTCCAATCCGCCGCAGCCGTCGCACAAG
ACCTTCCGGATCAAGCAGAAGCTGGCCAAGAAGCAGCGCCAGAACCGCCCCATCCCCTACTGGATCCGCATGAGGACCGA
CAACACCATCAGGTACCTTCCGCCGCCATTATC-------TCCTCCCCCGGT----------------------------
TAGTAATGGATCTATGGAGAGGAGACGGCGCCCCTAAGCTGTTTCGTTGCTGTCTCAGGTACAACGCCAAGCGCAGGCAC
TGGCGCCGCACCAAGCTCGGATTCTAAGCCGGGGATGACGATGATGACGCCCGTTGCCGCCGACGGGAGAAGGGTCTAGG
GTACCTAGGGTTTATGGCGTCTCGTTGTTTTTGCAAGCTAGCATGTGACTCCGGGATGCCTGTTTTAAGATTAAGATTTC
GCTTGTGTTGAGAGATATTATTAT--TTACTGCTTGTAGCCTACCTGGGATACCATCATATTTTGCTGATTATGGAACAG
CTTTTATCCTGCTTAAGCTCTGTATTTTGCCCGAGTTGAAATGGCCTGACCAGTTGAAATCCTTCG--------------
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---------------GTACCCTAGTATGGTTACCTACCTGCATTTTGAATGAATTTCTCGTGTAGCGGTTTGGCTTTAAG
CTGTTCATTTGTTTGTAGAATTGTTAACTGGTTGCTTGGTAGGGGATAGTTGTATTGTGGTTAGTGTAGAATACCTGTTG
TAGGCATGTGTAATTCCTGGGTGACTTGCCTAGTATCCTGCACAATTGGATCTTCCATATGAAACCAGATATGTAGGTTG
ATTCAATGTTCTACAATTATTTGCCTCTTGTGTGGTTGCTTTACTTGTTCAGTATGGTTTTAAGCTTTGATGTTTTCCTT
TTGCTTG-------------------------------------------------------------------------
------------------------------------------GTAGGAGATTGCCCTTTGTAGTTC-TACCAAAACCTTG
ATTTATCAATGACCTTTTCGCCATTTGTATTTCCTTTGTGCATGACTATTTATGCACATAGTTAGGTATT----CTGTAT
GTTTTGTTTTCTTTACAATTAGGTTTT-GGATGATTTAGTTGTTTTTAGTGGTGATACCTGTCATTATATAAG--TAGTT
TAATGTTTGTGGTTTGCTACATATAAAACGTTTCTTTAGTAGCTACTGCTGATAC-----TTGTTTGAACAAGGTCCAAT
TTTCTTATGCGCCCTCGTTGTGATGGCGATTTGAGGGGGATGGGGGTTATGTATGACCTCAGGGGGAGGCGAA--GCTGT
TTGGGAAGGTTTGCTTGTGTTGTGCTCTTTATAAG--TAATCAAATGATGGAAGATGAGTACATATGACA
>chr7D_76
---------------------------------------------------------------------------TGTGC
GTCGGTGAGCAGCTGAGAATGCGGGAGGCAAGGCA-----GGACCGACGCGGATCACAGCTGGTCGGCGGTGGGGATGGA
GGAGGTTATAGGGATGACATGCCCCCCG---CCGCTTTTTATGGTTTTGGGAAGTGGATTGGGAAGGATCAACTTACCCC
AATAGGTAGGGGCTTTAGTAGAAAATAAGTAGGGATAAGAGGGATGTTTTTTGGGAGCTCCTCTCAGATTATTTTTAGAG
ACCTTTACTCTCCAATTCTTGACATTTT-TGTAGGTAAAGGGGTTGTACCCTTTAGACTCCCCTCGTTTCACTACATTGA
CATCCAAGAGACTCTGCA--------------------------------------------------------------
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--------------------------------------------------------------------------TATTAG
TACTACTATCATTTAGTACTCACTCCGTCCCATAATATAAGATCTCATTACATTCGATATATGTTTAC------------
----------------------------------------------------AAAATCCAACCAAATTTATATATTAGTA
CAACCATCGTTGCATAGCAAACTATTTTTATGCTAACACAGATTTAAAAAATTAACACTTAAATGTTTGAAATCA-----
-----------------------GCTCTGTAACACATATGT---------------------------------------
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>chr7B_285
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---------------------------------------------GTTTTCTGTGAGCTCCTGTTAGATT--TTTCAGAA
CCCTTTAATCTCCAATTCTTGACCGTTT-T-TAGGTGGAGGGTTGGTACCCTCG-GACTCTCCTCGTTTTACTACACTGA
CATCCAATGGACTCTACATACTCCCTTCGTCTAGGTGTGTAAGTCATCTTACGAAAACCAAATAATCTCAAAACACTTAG
GCGCGGTGCATTAACTTCTACCTTGTTTCTTGTTTCTTCACATATCAACCAATAAGAGACGAGGGGTGTGCATACTTTTA
ATGACTTGAGACTGCTACTAAACACGACATGCAGTGGTTAGTTCATTGCATGCAATGCTATTAATTAGTAAATAAACATT
AATGTCTCTCATTTTCCCCTCCTCCTTGGTCACGGTGACGACCTAAGATGACTTACTCACCTAGACGGAGAGAGTATTAG
TAGTACTATCATTTAATACTCCAGCTGCCTCATAAT-TAATATATCATTACTTCTGATATATCATTACATCAAAGTATGA
GTATATTGGATGTAATAAGATCTTATATTATAAAATGGAGGGAGTGTTTTGTAAAATCCAACCAAATTTATATATTAGTA
CAACTGTGGTTGCATATCAAACTATTTTTATGCTAACACAGATTTTAAAAATTAACACTTAAATGTGTGAAACTGCTCTG
TAACACATTTATTTTGAGAAGATGCTCTGTAACACATATGTGTATATTGGGGAGTACATTTTTTGAGAACTTACTGGGGA
GTACATGTGCATGTATTTGGAACTCGGAAACAGAAGTCCTTGTAG-----------------------------------
--------------AGGAAGTCGTTATTGTGAGAA-CGCGGAGGAGGGAATCAGA------ACATTATGGGCCCATTAAA
GCGCAGTCTCTCTGTGTTTT--CACAACAGAGAAGAGTACAGACATAACGTTACGAGCCCATGAAAGCCCAGTTCTGTAT
GTTTGACAGAATGGCCCACCAGGAGTATTCAGTCCGCCGACCTATTTCATTCCAAAGAACTAGCCGAGCCCATTAGGTCC
ATACGGCACCGCTCTCCACTATATAAGCCCTCACGGCCTCCATTTCCCCCTCCTCCGATCCAAGGGTTTCCTCGCGCCGC
CGCCGCAGCCGCCTTCGTCCACGCCGCCACGATGGTACGCATCTCCGTTCACTCTCCCCGGAATCTCTC-CCCCTCTGCT
TCGATTCCGCTCCCCGTGTTCCGTCCTTCATGGATTCGCGCTGATCCGTCGCCTCCAATCTGCCGCAGCCGTCGCACAAG
ACCTTCCGGATCAAGCAGAAGCTGGCCAAGAAGCAGCGCCAGAACCGCCCCATCCCCTACTGGATCCGCATGAGGACCGA
CAACACCATCAGGTAACTTCCGCCGCCAGAC-C-------TTCTCCACCGGTTCGCCCGCCGTTAGCTGCCAGTGCTTGC
TAGTAATGGATCTATGGAGAGGAGACGGCGCCGCTAAGCCGTTTCGTTGTTGTCTCAGGTACAACGCCAAGCGCAGGCAC
TGGCGCCGCACCAAGCTCGGATTCTAATCCGGGGATGACGGCGATGACACCCGTTGCTGCCGACGGGAGAAGGGTCTAGG
GTACCTAGGGTTTATGATGTCTCGTTGTTTTTGCATGCTAGCAAGTGACTCCGGGATGCCAGTT------TTAAGATTTC
GCTTGTGTTGAAAGATATTATTATTATTACTGCTTGTAGCCTACCTGGGATACCGTCATATTTTGCTGATTATGGAACCC
CTTTTATCCTGCTTAAGACCTGTATTTTGCCTGAGTTGAAATGTCCTGACCAGTTGAAATCCTTCG--------------
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---------------TTACCCTAGTATGATTACCTACCTGCATTTTGAATGAATTTCTTGTGTAGCGGTTTGGCTTTAAG
---TTCATTTGGGTGTAAAATTGTTAATCGGTTGTGTGGTAGGGGATAATTGTATTGTGGTTTGTGTAGAATACCTGTTG
TAGGCATGTGTAATTCCTGGGTGACTTGCCTAGTATCATGCACAATTGGATCTTCCATGTGGAACCAAATATGTAGGTTG
ATTCAATGTTCTACAATTATCTGTCTCTGTTGTGGTTGCTTTACTTGTTCAGTATTGTTTTAAGCTCTGATA---TCCTT
TTGCTTGATACTCCCTCCGTCCGGGAATACTTGTCATCAAAATGGATGAAAATGGATGTATGTAGAACTAAAATACATCT
AGATACATCTAATTCAATGACAAGTATTTCCAGACGGAGGGAGTAGGAGATTGCCCTGTTGTT---TTACCAGAACCTTG
ATTTATTAATGACCTTTTTGCCATTTGTAGTTCCTTTGTGCATGCCTATTTATGCACACAGTTAGGTATTCTGTATGTAT
GTTTTGTTTTCTTAACAATTTGGGTTTTGGATGTTTTAGTTGTTTTTAGTGCTGATACCTGTCATTATGCAAG--TAGTT
TAATGTTTGTGGTTTGCTACATATAAAATGTTTCTTTAGTAGCTAGTGCTGATACAGTACTTGTTTGAACAA--------
--------------------------------------------GGTTATGTATGACCTCAGGGGGAGGCGAGAGGCTGT
TTGGGAAAGTTTGCTTGTGTTGTCCTCTTTATAAGTATAATCAACTAATGAAATAAGGGTACATGTGACA
>chr7D_685
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--------------AGGAAGCCGTTATTGTGAGACGCG--GAGGAGGGAATCAGAGACGTAACATTATGAGCCCATTAAA
GCCCAGTCTCGATGTCTGTTTTCACAAAAGGGAAGAGTACAGACATAACGTG-CGGGCCCATGAAAGCCCAGTTCTGTAC
GTTTGACACAAAGGCCCACCCGCAGTAGTCAGTCCGCCGACATATTTCATTCCAAAGAACTAGCCGAGCCCATTAGGCCC
ATACGGCACTGCTCTCCACTATATAAACCCTCACGGCCTCCATTTCCCCCTCCTCCGATCCAAGGGTTTCCTCGCGCCGC
CGCCGCCGCAGCTTCC-TCCCCGCCGTCACGATGGTACGCATCTCCGTTCACTCTCCCTCGAATCCCTCTCCCC-CTGCT
TCGATTCCTCTCCCCGTGTTCCCTCCTTCATGGATCCTCGCTGACCCGTCGCCTCCAATCCGCCGCAGCCGTCGCACAAG
ACCTTCCGGATCAAGCAGAAGCTGGCCAAGAAGCAGCGCCAGAACCGCCCCATCCCCTACTGGATCCGCATGAGGACCGA
CAACACCATCAGGTACCTTCCGCCGCCATGACCTTCTCCGTTCTCCCACGGTTCGCCCGCCGTTAGCTGCCAGC----GC
TAGTAGTGGATCTATGAAGAGGAGACGGCCCCCCTAAGCGGTCTCGTTGCTGTCTCAGGTACAACGCCAAGCGCAGGCAC
TGGCGCCGCACCAAGCTCGGATTCTAAGCGGGGGATGACGACGATGACACCCGTTGCCGCCGACGGGAGAAGGGTCTAGG
GTACCTAGGGTTTATGACGTCTCGTTGTTTTTGCAAGCTAGCATGTGACTCCGGGATGCCTGTT------TTAAGATTTC
GCTTGTGTTGAAAGATATTATTATT--TACTGCTTGTAGCCTACCTGGGATACCATCATATTTTGCTGATTATGGAACTA
CTTTTATCCTGCTTAAGCTCTGTATTTTGCCCGAGTTGAAATGGCCTGACCAGTTGAAATCTTTAAGGGTCTGTCAGGAC
ACATCTACATGTGACATAGTTATGTCACATCTAAGCTGATGTCCACTCTGTTTGTGGTCTATTTTTTGTCCTAGGTTCTT
TTTGTTTCTTGTTGCTGCATTATAGATTTGTGGGAGCTTAGATGTGACATCCTTAAAAAACATCTAGATGTGAATTAGAC
AAACCGAATCTTTAATTACCCTAGTATGGTTACCTACCTGCATTTTTAATGAATTTCTTGTGTTGTGGACTTTTAAGTTG
---TTCATTTGGGTGTAGAATTGTTAACCGGTTGCTTGGTAGGGGATAGTTGTATTGTGGTTTTTTTAGAATACCTGTTG
TAGGCATGTGTAATTCCTGGGTGACTTGCCTAGTATTCTGCACAATGGGATCTTCCATATGGAACCAAATATGTAGGTTG
ATTCAATGTTCTACAATTATCTGCCTCTGTTGTGGTTGCTTTACTAGTTCAGTCTGGTCTTAAGCTGTGATGTTTTCCTT
TTGCTTG-------------------------------------------------------------------------
------------------------------------------GTAGGAGATTGCCCTGTTGTAGTCTTACCAGAACCTTG
ATTTATTAATGACCTTTTTGCCATTAGTAGTTCCATTGTGAATGCCTATTTATGCACACAGTTAGGTATTCTGTCTGCAT
GTTTTGTTTTCGTAACAATTGGGTTT-TGGATGTTTTAGTTCTTTTTAGTGCTGATACCTGTCATTATACAAGTATAGTT
TAATGTTTGTGGTTTGCTACTGT--------------------------TGATAC-----TTGTTTGAACAAGGTCCAAT
TTTCTTATGCGCCCTCATTGTGATTCTGATTTGAGTGGTACT-GGGTTATGTATGGCCTCAGGGGGAGGCGAG--GCTTT
TTAGGAAGGTTTGCTTGTGTTGTGCTCATTA--------ATCAAATGATGAAAGATGA------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
-S---S----------------------SS-----SSSSS-----------------SS-S-------------------
--S-------S----SS-SSS------SSSS--S----------S-----S---------------S---S---------
--S--------SS--------------S-------S-------SS-----------------------------------
---------S--------------S--SS------------------S--------------------------------
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---------------------------------------------------------------------------S-SSS
SSS--SSSSSS---------------------------------------------------------------------
-------------------------------S-S-S-----S---SSS---------------SS--SSS----------
---S------------------------------------------S------------------S--------------
--------S-S-SS------------------------------------------------------------------
-----------------------------------SSSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS---------------------------------------------------S--------------
-------------------------------S-----S------------------------------------------
----------S------------------------SSS------------------------------------------
-------------------------------------------------S------------------------------
-------------------S-----------------------------------------------------S------
---------------------------S---------S------------------------------------------
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-----------------------------S-S---------S--------------------------------------
---------------------------------------S----------------------------------------
-----------------------------------------S------S-------------------------------
----------------S-----------------------------------------------SSSSSS----------
-----------S------------------------------------------------------------------SS
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---------------S------------------------------------------S---------------------
SSS--------SS---------------S---------------------------------S-----------------
-------------------------------------------------------------S-----S------------
--------------------S-------SS------------------------------------S-------------
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---------------------------------------------------------S-SSSSS--------S-------
------S-----------S----------S--------------S-------------S---------------------
-------------S------S------------S-----------------S-----------------S----------
----------------------------S----------------S----------------------------------
----------------S-------SSS--------S--S-SSS-----------------------------S-------
--------------------------------------------------S-------------S-----
>forward_41
---------------------ACTGTGTAGCAACTACCGGC---------------------------------------
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>reverse_2581
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--------------------TTGCCTCTTGTGTGGTTGCT----------------------------------------
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