>input_sequence_82650
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------ATGGCGTCGACCTCTCGCCGTAT
GGTTGCGTCCGTCCTCTTGGTCCTTCTTCTCCTCGTCGCCACAGGTGATCTTCATTAGTCTTCTCAATTTGTTAAGACCA
TCGGATGGTCAAATATGCATCCTGTAGTA---T--------------------------CCATTTGCGTCTGATCCGACG
GAGTAATTAAACTGCAGAGATGGGGACGATGAGGGTGGCGGAGGCGAGGCACGGGCACAGGCACTGCGAGTCGCAAAGCC
ACAGGTACCGCGGAGCGTGCTGGAGGGA----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CGACAACTGCGAACACGTCTGCAACAC
CGAGGGCTTCCCTTGGGGCAAGTGCAAGTTCCACGACTTCGAAAGGAAGTGCTTCTGCAAGAAACCGTGCTAG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr2B_1_TraesCS2B01G396100
AGGTGGTTGCAGCAGTAGCGGCGGGCAGCAGTGGCATGCTTGAAGCAGCTGCCGGCGGCCTGCAGCCGAGTGTGGTGCGT
CGTGGCTTTACGGCGGTGGTCTTCTGTGACGAGAGAAGCACAAGAAAGAGAGAGACACAGCAAAAGAGATAAGATGAAGG
AATGACGAAGGAAAAGAAATCACGGAAGATGGGAAGGCCCCTGACGCTTCTGGAGATGGAGACGTGGGCCACAGGCCACG
TGAAAGGCGATGGACGTGGCTTAAAAAGCGTGCGAGATCAGCCGGTCCAAAAAGAACGTTTCTCTTTTTATCATGAATGG
GTGAAAAAATTGAAGAAACGCACCTTGCTACGCACCGACCAGTTGTCTTGCACGCGGCACAGCCTGACCACCACCGACCA
CTGTCCGCACATATCATAGTGCATATCACGTGTATTGCCCGTCCGCACTGTCAGGGCGGTAGCTGAGCTCCCGCAACAA-
AGCAAACACTCGATGAGTGTGTAGCCACCCGTGCCCTCCGACTAGTCGCTACCCCTGAATCTGTAGCCTGCCCAGCATCA
ACACGTGCAGACGACACCGCCCCTGCCTGCATGCTCTATGCATCT-CCGCAGTCCGCACTACATTCTGAAGACATCCACG
CATGAACCTCTAAACCCGTGTACAATACTAT-A--CTTTCTGCACGGCCTGTAACCCGGTGCCGATGAGATTGTTGGCAC
C-------CCCCGGTTTAAGACACCGAGGACGTCGAGGAGCAATGAACCGAATCTTGCCTGCACCAGAATATTTTAACCA
CTGCAAAAGCCGTCCTGCATTTGTGTTTCAGAGTTGAGTCCTTTGTGCTGAATTTGAACTGTGCCCAGGCTTCTGAACCT
CCTATATAAACCCCCCATCGTCCCCATCCCACTCACCTAGCAAATCATATCACTGTAACCTTAAGTTGGACTACAGCATC
CG-----TTGCGAAACCACCAGAATCATAAGGTAGACATTCTACGCAAGCAGAGCAAATGGCGTCGACCTCTCGCCGTAT
GGTTGCGTCCGTCCTCTTGGTCCTTCTTCTCCTCGTCGCCACAGGTGATCTTCATTAGTCTTCTCAATTTGTTAAGACCA
TCGGATGGTCAAATATGCATCCTGTAGTA---T--------------------------CCATTTGCGTCTGATCCGACG
GAGTAATTAAACTGCAGAGATGGGGACGATGAGGGTGGCGGAGGCGAGGCACGGGCACAGGCACTGCGAGTCGCAAAGCC
ACAGGTACCGCGGAGCGTGCTGGAGGGA----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CGACAACTGCGAACACGTCTGCAACAC
CGAGGGCTTCCCTTGGGGCAAGTGCAAGTTCCACGACTTCGAAAGGAAGTGCTTCTGCAAGAAACCGTGCTAG---CCAC
TTCATCGACCGATGGATCAGCTGGCTAGTTAGCCGCGCACCACGACCACCCTCGTGATCTTCGTAGTGCTCCTCTCCTGT
TTCGTGTACCGCTTTCCTTATT----------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CCTAATCTAGTAAGGTCTACATGCGTTGTGCATGCCATTT-CCTTGT--TACAAGTATT
TTGCTTCGTACGGTGTAATCTAGCTAGGGTGCTAATAAAAGTTGGTCGTCGGTGTGCTTGGACGTCTTTTATCACATTGT
ACGGGCATCTCCAACTGTCCCGCAGAATCTTTTCTGCATCCATCCGTGGACTGGTCGCATACAGTTTCACATCATCTCAA
ACCAACCAGATGAAATTCGATCAAACACTGCCAGATTTCATATAAACA-TGACGGATTTCATATAAAGAATCCGAA-TTT
GATATAAACATGACGGATTTCAGTACATCTACATCAATG-----GTGCTAGTCCGGCTCTGAAGGTATA------ATTAA
TACCTAATCTAAATCGCCGCTCGCGGATCCATTTGTCTTC-TCATGTCAGGCAGCCCGATCACGGGACTGACGAGAGCCC
CGAAGGTATGTGCTTTAGCGCAAAGGACGGCTTGTG-------------------------CCCCGGCTGATGCTTCAGC
GGGAGGG-GAAGGCGGCGCGTCTGCTTTCGTGGAGCCCGTGTGGGATCGACAGAGGTCCTCGCAAAAGAAGAACCGAGCA
AGACACTAGCTGTGTATGCTGGCGTCGCCTAAACGGTGGCCTTCATGGGACCCAAGCGACAGTGGACTCCCGTGTTCTAC
TTCTCCTCGATGATG----------------ACGCGGAGCCGCCGGCCACTGACTCGTCGCTCTTCCCGCACC-GACTTC
TGTCTCTGCCTGCATGGTGCGGTCACAGATACTGGAGGCGCAGTT-----------------------------------
-------GTCGATGACAGTGATGACGCCCGTGTCGCTGTGCTCCCCGCCGTGC-------------CGGCATGGAGCAAT
TCGCCACTCCTCATCGAGTGGGCCTAGAGTAGTGAGTTGCTGAACCACGCAGCGGCTTGGGACGGCAATT
>chr2D_350
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------ACGCACCGACCAGTTGTCTTGCACGCGGAACAGCCTGACCACCACCGACCA
CCGTCCGCACAGATCACAGTGTAAATCACGTGTATTGCCAGTCCGCGCTGTCAGGTCGGTAGCTCAGCTCCCGCAACAA-
AGCAAACAGTCGATGAGTGTGCAGCGACCCGTGCCCTCTAGCTAGTCGCTACTCGTGAATCCGTAGCCTGCCCAGCATCA
ACACGTGCAGACGAGATA-CCCCTGCCTGAATGCTCTATGTATCTCCCGCAGTCCGCACTACATTCTGAAGACATTCACG
CATGAACCTCTGGACCCGTGTACAATACTAGTATTCTTTCTGCACGGCTTGCAACCGGGTG---ATGAGATTGTTGGCGC
CATTGGCACCCCGGTTGAAGACATCGAGGACGTCGAGGAGCAATGAACCGAATCTTGCCTGCACCAGAATATTTTAACCA
CCGCAAAAGCCGTCCTGCATTTGTGTTTCAGAATTGAGTCCTTTGCGCTGAATTCGAATTGCGCCCAGGCTTCTGAACCT
CCTATATAAACCCCC-ATTGTCCCCGTCACAATCACCTAGCAAATCATATCGCTGTAACCTTAAGTTGGAGTACATCGCC
CCTT-CCTAGCAAAACCACCAGCATCA----------------CGCAAGCAGAGCAAATGGAGTCGACCTCTCGCCATAT
GGTTGCGTCCGTCCTCTTGGTCCTTCTCCTCCTCGTCGCCACAGGTGATCTTAACTAGTCTTCTCAATTTGTTAAGTCAA
GCGGATGCTCAGATATGCACCCTGTAGTATTCT--------------------------CCATTTGTGTCTGATCCGACG
GAGTAATTAAACTGCAGAGATGGGGACGACGAGGGTGGCGGAGGCGAGGCACAGGCAC------TGCGAGTCGCAGAGCC
ACAGGTACCGCGGAGCGTGCTGGAGGGA----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CGACAACTGCAAGCACGTCTGCAACAC
CGAGGGCTTCCCCTCGGGCAAGTGCAAGTTCCACGGCTTCGAAAGCAAGTGCGTCTGCACGAAACCCTGCCAGTAGCCAC
CTCATCGACCGACGGATCACATAGCTAGCTAGCCGCGCACCACGACCGCCCTCGTG-TCTTCAGAGTGTTCCTCCCCTG-
TTCGTGTACCGCTTTCCTTATT----------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CCGAATCTAGTAAGGTCTACATGCGTTGTGCATGCCATTTTCCTTGT--TACAAGTGTT
TTGCTTCCTACGGTGTAATCTAGCTTGGGTGCTAATAAAAATTGGTCGTCGGTGTGCTTGGGCGTCTTTTATCACATTGT
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr2A_368
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TTGCACGCGGCACAGCCTGACCACCACCGACCA
CCGTCCGCACAGATCACAGTGCATATCACGTGTATTGCCCGTCCGCACTGTCAGGTCGGTAGCACAGCTCCCGCAACAAA
AGCAAACACTCGATGAGTGTGTAGCCACCCGTGCCCTCCGGCTAGTCGCTACCCCTGAGTCCGTAGCCTGCCCAGCATCA
ACACGTGCAGACGAGACA--CCCAGCCTGCATGCTCTATGCATC--------TCCGCACTACATTCTGAAGACATCCACG
CATGAGCCTCTGAACCCGTGTACAATACTATTA--CTTTCTGCACGGCTTGCAACCCGGTGCCGATGAGATTGTTGGCAC
CACG---------------------------GTCGAAGAGCAATGAACCGAATCTTGCCTGTACCAGAATATTTTAACCA
CTGCAAAAGCCGTCCTGCATTTGTGTTTCAGAATTGAGTCCTTTGTGCTGAATTTGAATTGCGTCCAGGCTTCTGAACCT
CCTATATAAACCCCC-ATTGTCCCCGTCATACTCACCTAGCAAATCATATCAGTGTAACCTTAAGTTAGAGTACATCGCC
CCTCCCCTTGCAAAACCACCAGCATCA----------------GGCAAGCAGAGCAAATGGCGTCGACCTCTCGGCGTAT
GGTTGCGTCCGTTCTCTTCGTCGTTCTCCTCCTCGTCGCGACAGGTGATCTTAACTAGTCTTCTCAATTTGT-AAGTCGA
GCGGATGCTCAGATATGCACCCTGAATCTAGTTAGGCCTACGTACATGCGTTGTGTACGCCATTTGTGTCTGACCCCACG
GAGAAATAAAACTGCAGAGATGGGGGCGACGAGGGTGGCGGAGGCGAGGCACGGGCACAGGCTCTGCGAGTCACAGAGCC
ACAGGTACCGCGGAGCGTGCTGGAGGGTTTGATGCTAAAAGTTGGCATGTCAAATTTTGGCAAGTACCAAATGTTGGCTA
GAGATTGGTTGCTTGCCAATTTTCGCTGCCAATCTCACAAAAAATTGTCAATTGTTGGCAACTTTTGATTTTGCTAAATG
TTGGCTTGCCAAATATTGGCAATGCTAAATGTTGGTAGCAAACCAATTATACTCGAGAACTGCGCGCACGTCTGCAACAC
TGAGGGCTTTCCCTCGGGCAAGTGCAAGTTCCACGGCTTCGAAAGCAAGTGCTTCTGCAAGAAACCCTGCTAG---CCAC
TTCATCGGCCGATGGATCGGCTGGCTAGTTAGCCGCGCACCACGACCGCCCTCCTG-TCTTCAGAGTGTTCCTCCCCTG-
TTCGTGTACCGCTTTCCTTATTCCGAATAAGCACTGCTATACACACGATAAATCCATGCACGATCTGCGCACGACAACAC
ATCTACACCCTTGGGTTGCCTCGCTTTGTAAATCTTTGTGGCCCAAATCATTTCGTGTGTGGATCGTGCATGCACAGTTC
GTGTGCACAGCACTTCCGATTCCGAATCTAGTAAGGTCTACATGCGTTGTGCATGCCATTT-CCTTATTATACAAGTGTT
TTGCTTCATACGGTGTAATCTAGCTAGGGTGCTAATAAAAGTTGGCCGTCGGTGTGCTTGGACGTCTTTTATCACATTGT
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr1A_1641
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------CATCCATCCAATG-CTAGCCGCATACATTTTCACAACAACTCAA
ATCAACCAGATGAAATTCATCCAAACATGGCCGAATTTCATATAAAAA-TGATGGATTTCCTATAAAAA-GCCAAATTTT
CATATAAACATGATGCATTTCAGTACATTTGCATCAGTG-----GTGCTAGTCCAACTCTAAAGGTATA------ATTAA
TACCTAATCTAAATCGCCGCCCGCAGATCCCTTTGTCTTCCTCATGTCCGATAGCCCGATCAATGGACTGCCGGGAGCCC
CGGAGGTATATGCTTCAGCACAAAGGATTGCTCACTTTTCGACCACTCATCGGAG-TGGACCCCCGACTGATACTTCAGC
GGGAGGG-GAAGGCGGCGCCTCCGCTTCCATGAAGTACATGTGGGATCGACGAAAGTCGTCGAAAGAGAAGAATCGGGCA
AGACACTGGCTGTGTACGCTAGTGTCGCCCAGGCGGTGCCCTTCATGGGACCCAAGTGGCAACGGACTCCCGTGTTCTAC
TTCTCCTCGATGATGG---------TGGCAGATGCGGAGGCGCCAGCCACCGACTCGTTGCTCTTCGCGCACCCGGTTTC
TGCCTCTGCCTGAATGGCGCGGTCGCAG----------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr1D_1655
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CTGGCCGCATACATTTTCACAACAGCTCAA
ACCAACCAAAATAAATTCATGCAAACACGACCAGGTTTCACATAAACA-TGACGGATTTCATATAAAAAAGCCAAATTTT
CATATAAACATGACGCATTTCAGTACATTTACATCAACG-----GTGCTAGTCCGACTCTGAAGGTATA------ATTAA
TACCTAATCTAAATTGTCGTCCGCGGATCCTTTTGTCTTCCTCATGTCCGGCAGCCCGATCACCATACTACCGGGAGCCC
CGGAGGTATATTCTTCAGCACAAAGGACGACTCACTTTCCAATAGCTCATCAGAGTGGAACCCTCGGCTGATGCTTCAGC
GGGAGGG-GAAGGCTATGCCTCCACTTCCGTGAAGCCCATGTGGGATCGACAGAAGTCCTCAAAAGAGAAGAAACAGGCA
AGACATCAGTTGTGTGTGCCGGTGCCGCCTAGGCGGTGGCCTTCATGGGACCCAAGCGGTGGCGGACTCCCACGTTCTAC
TTCTCCTCGATGATGG---------TGGACGAAACAGAGGCGCCGGCCACCGACTCGTTGCTCCCCGCGCACCCGGTTTC
TGCCTCTGCCTGCATGGCGCAGTCGCAGGCACGGGAGG------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr2B_1660
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CGCATATATTTTCACAA-AACTTAA
ACCAACCGAACAAAATTCATACAAACACGGCCAGATTCCATGCAAACA-TGACGGATTTCATATAAAAAAGCTAGA-TTT
CATATAAACATGACGGATTTCAATACATTTACATCAATT-----GTGCTAGTCCGACTCTGAAGGTATA------ATTAA
TACCTAATCTAAATCGCCGCCCGTGGATCCCTTTGTTTTCCTTATGTCCGGCAGCCCAATCACCGGACTGCCGGGAGCCC
CGGAGGTATATGCTTCAGCGCAAAGGACGGCTCGCTTCCCCGCCACTCATCGGAG-GGAACTTTTGGCTGATGCTTCAGC
GGGAGGG-GAAGGCGGCGCCTCCGCTTCCGTGAAGCCCATGCGGGATAGAGGGATGTTCTCGAAAGAGAAGAACGAGACA
AGACATCGACTGTGTACGCCGGTGTCGCCTAGGCAGTGGCCTTCG-TGGACCCAAGCGGCGGCGGACACCCGTGTTCTAC
TTCTCCTCGGTGATGG---------CGGCGGACGCGGAGGCGCCGACCACCGACTCATCGCTCTCCGCGAACCCGGCTTC
TGCCTCTGCTTGCATGGCACAGTCGCAGGCACGGGAGGCGCGTT------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr2D_1660
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CGCATACATTTTCACAAGAACTCAA
ACCAACCGGACGAAATTCGTGCAAACACGGCTGGATTTCATGCAAACA-TGACGGATTTCATGTAAAAA-GCCAAATTTT
CATATAAACATGACGGATTTCAGTACATTTACATCAACG-----ATGCTAGTCCGGCTCTGAAGGTATA------ATTAA
TACCTAGTCTAAATCGCCGCCTGCGGATCCCTTTGTCTTCCTCATGTATGGCATCCCGATCATCGGACTGTCGGGAGCCC
CGGAGTTATATGCTTCAGCGCAAAGGACGACTCGCTTCCCCGCCACTCATCGGAGTGGAATCCCCGGCTGATGCTTCAGC
GGGAGGG-GAAGGCGACACCTCCGCTTCCGTGAAGCCCATGTGGGATCGACAGAGGTCCTCGAAAGAGAAGAACCGGGCA
AGGCAACGGCTGTGTACGCCGGTGTCGCCTAGGCGGTGGCCTTCATGGGACCCAAGCGGTGGCGGACTCCCATGTTCTAC
TTCTCCTCGGTGATGG---------CGGCGGACGCGGAGGCGCCGGCCACCGACTCGTTGCTCTT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr3D_1660
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CGCATACATTTTCACAACAACTCAA
ATCAACCGAA-GAAATTCGTGCAAACACGGCCGGATTTCATGCAAACA-TGACGGTTTTCATATAAAAAAGCCAGATTTT
CATATAAACATGACGGATTTCAGTACATTTACATCAACG-----GCGCTAGTCTGGCTCTGAAGGTATA------ATTAA
TACCTAATCTAAATCGCCGCCCGCGGATCCCTTTGTCTCCTTCATGTCTGGTAGCCCGATCACCGGACTGCCGGGACCCC
CGGAGGTATATGCTTCAGCGCAAAGGACGGCTCGCTTCCCCACTGCTCATCAGAG-TGAACGCGCAGCTGATCCTTCACC
GATAGGG-GGAGGGTGCGCCTACGCTTCCGTGAAGCCCATGCGGGAGCAA-GAAGGTGCTCGCAAGAGAAGAACTGGACA
AGACACCGGTTGTGTACACCGATGTCGCCTCGGCGGTGGCCTTTGTGGGACCCAAGCGGCGGCGAACTCCCGTGTTCTAC
TTCTCCTCGATAATGG---------TGGCAGACGCGGAGGTGCCGGCCACCGACTCGTCACTCTCGGCGCACCCGACTTC
TACATCTGCCTGCATGGCGCGGCCATAGACGCGGGAGGCGCGGTC-----------------------------------
-------ATCGACGACAGCGATGACGCCCGTGCCAGCA------------TGC-------------CGGCGTCGAGCAAC
TGGCCACTCCTCATCGAGTGGGCCTGGAGCGGCGAGTTGCTGAACCACGCGGCGGCTTGGGGCGGCAA--
>chr7D_1660
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CGCATACATTTTCACAACAACTCAA
ACCTATGGGACGAAATTCGTGCAAACACGGCCGGATTTCATATAAACA-TGACGGATTTCATGTAAAAAAGTCAGATTTT
CATATAAACATGACATATTTCATAACATTTACATCAACG-----GTGCTAGTGCGGCTCTGGAGGTATA------ATAA-
----TAATCTAAATGGCCGCCCGCAGATCCCTTTGTCTTCCTCATGTCCGGCAGCCCGATCACCGGACTGCCGGGAGCCC
CGAAGGTATATGCTTCAGCGCAAAGGACGGCTCGCTTCCCCACCACTCATCGGAGTGGAACCCCCGGTCGATGCTTCAGC
GAGAGAG-GAAGGCGGCGCCTTCTCTTCCGTGGAGCCT-TGTGGGGTCGACCGAGGTCCTCGAAAGAGAAGAACCAGGCA
AGACACCGGATGTGTATGCCAGCGTCGCCTAGGCGGTGGTCTTCTTGGGACCCAAGCGGCAGCGGACTGCCGTGTTCTAC
TTCTCCTCGATGATAG---------CGGCGGACGCGGATGCGCTGGCCACCGACTCGTTGCTCTCCGCGCACCCGACTTT
TGTCTCTGCCTGCATGGCGCGGTCGCATGCACGGGAGGCGCGGTCACACGCACGGGAGGCGCGACAGCATACACGGGAGA
CGCAGACGTCGACGGCAGCAATGACGCCCGTGCCACCG------------TGCTGTCCGT-CGTGCTGGCGTGGAGCAAT
TCGCCACTCCTCATCGAGTGGGCCTGGAGCGGCGAGTTGGTGGACCACACGACGGCTTGGGGCGGCAA--
>chr4B_1660
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CGCATACATTTTCACAACAACTCGA
ACCAACTGGATGAAATTCGTGCAAAAACGGCTGGATTTCCTATAAACA-TGACGAATTTCATATAAAAT-GCCAGATTTT
CAAGTAAACATGACAGATTTCATTACATTTGCATCAACTAAGCAGTGCTAGTCCGACTCTGGAGGTATA------ATTAA
TAGCTAATCTAAATGGCCGCCAGTGGATCCCTTTGTCTTCCTCATGTTCGGCAGCCCGATCACCGGACTACCGACAGCCC
CAGAGGTATATTCTTCAGCGCAAAGCACGACTGGCTTCCCCACAACTCATGAGAGTGGAACCCCCAGCTGATGCTTCGGC
GGGAGGG-GAAGGCGGGGCCTCCGCTTCCATGGAGCCCATGCGGGATCGACGAAGGTCCTCGCAAGAGAAGAACCGGGCA
AGATATCGGCTGTGTATGCCAGCGTCGCCTCGGCGGTGGCCTTAATGGGACCCATGTGGCGGCGGCCTCCCGTGTTCTAC
TTCTCCTCGATGATGG---------CGGCGGACGCGGAGGCGCTGGCTACTGACTTGTCGCTCTCCGCGCACCCGCCTTC
TATCCCTGCATGCACGGTGCGACTGCAAGCATGGGAGGCGTGGTACGACGCGTCGTC-----------------------
-------ATCGACGGCACCGACAACGCCTGTGTCACCG------------TACTCCCCGTGCGTGTCGCCGTGGAGCAAC
TCACCACTCCTCATCGAGGTTGCCTGAAGCAGCGAGTTGCTGAACCACGCACCCGCTTGGG---------
>chr3A_1661
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GCATACATTTTCACAACACCTCAA
ACCAACCA-ACAAAATTCATGCAAACACGGTCGGATTTCATGCAAACA-TGACGGTTTTCATATAAAAA-GGCAGATTTT
CATATGAACATGATGGATTGCAGTACATTTACATCAACG-----GTGGTAGTCCGGCGCTGAAGGTATA------ATTAA
TACCTAATCTAAATCGCCGTCCGCGGATCACTTTGTCTTTCTCATGTCCGGTAGCCCGATCACCGGACTACCGGGACACC
CGGAGGTATATGCTTTAGCGCAAAAGACGACTCGCTTCCCCACCGCTCATTGGAGTGGAACCCCTGGCTGATGCTTCACT
GGTAGGG-GAAGGGGGG--CTCCGCTTCCGTGAAGCTCATGCGGGAGCAACGAAGATCATCGCAAGAGAAGAACCGGGCA
AGACACCGGTTGTGTACGCCGGTGTCGCCTCGGCGGTGGCCTTCGTGAGACCCAAGCGGTGGCGGGCTCCCGTGTTCTAC
TTCTCCTCGATAATGG---------CGGCGGAGGCAGAGGTGTCGGCCACCGACTCGTCTCTCTCCGCGCACCCGACTTC
TGCATATGCCTGCATGGCGCGGTCGCGGGCATGGGAGGCGCGGTA-----------------------------------
-------TTCGACGACAGCGATGACGCCTGTG------------------------------------------------
----------------------------------------------------------------------
>chr1A_1662
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CATACATTTTCACAACAATTCAA
ACCAATCGGACGAAATTCATGCAAACACAGCCGGATTTCATGCAAATA-TGACGAGTTTCATATAAAAA-GGCGGATCTT
CATATAAACATGA-GGATTTCAGTACATTTACATCAACG-----GTGCTAGTCCTGCTCTGAAGGTATA------ATTAA
TACCTAATCTAAATCGCTGCCCGCGGATTTCTTTGTCTTCCTCATGTCCGGCAGCCCGATCACCGGACTGCCGGGAGCCC
TGGAGGTATATGCTTCAGCGCAAAGGACGACTCGCTTCCCTGCCACTCATCGGAGTAGAACCCCCGGTTGATGCTTCAGC
GGGTGGG-GAAGGCGGCGCCTCCGCTTTCGTGAAGCCCATGTGGGATCGACGGAGGTCCTCCAAAGAGAAGAACCGGGCA
AGACACCGGCTGTGTACGCCGGTGTCACCTACGTGGCGGCCTTCATGGGACCCAATCGGTGGCGGACTCCCGTATTCTAC
TTCTCCTCGGTGATG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr1D_1673
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ACAGCAACTC-A
ACCAACCGGACGAAATTCATGCAAACACGGCGATATTTCATATAAACAATGATGGAATTCATATAAAAT-ACCGAGTTTT
CATACAAACATGACAGATTTCATTACATTCAAATCAACT-----AAGCGGTGCTACTCCTGAACAGCACAGGTATAATAA
TACCTAGCCTAAATGGTTGCCCGCCGATCGATTTGTCTTCCTCATGTTCGGCAGCACGATCACTAGACTGCCGGGAGCCC
GTGAGGTATATGCTTCAGCGCAAAGGACGGCTCGCTTCCCCACCGCTCAACTGACAT----TGTTGGCTGATGCTCAAGA
TGGAGTCTGAAGGGGGCTTCTCTGCTTTCGTGGAGCCCATGCGGGGTCGACAAAGGTCCTCGCAACAGAAGGATCCGGCA
AGACACCTGTTGTGTACGCCGGCGTCTCCCCGGCGGTGGCCTTCCTTGGACCCAAGCGGCGGCAGCCTCCCGTGTTCTAC
TTCTCCTCGATGATGC---------CGGAGG---------CGCTAGCCACCGACTCGTCGCTTTCCGCGCACCCGGCTTT
TGTCTCTGCTTGCATGGTGCGGCCACAG----------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr6B_1683
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AA
ACCAACCGGACGAAATTCGTACAAACACGATCGGATTTCATATAAACA-TGAT-GATTTCATATAAAAAAGGCGGATTTT
CATTTAAACACGACGGATTTCGGTACATTTACATCAGCG-----GTGTTAGTCTGGCTCTGAAGGTATA------ATTAA
TACCTAATCTAAATCGTCATCCGCGGATTCCTTTGTCTTCCTCATGTCCGACGGCCCGATCACCGGATTGTCAGGAGCCC
TGGAGGTATATGCTTCAGCGCAAAGGACGGCTCGCTTCCCCATCACTCATTGGAGTGGAACCCCCGGCTGATGCTTCAGC
GGGAGGG-GAAGGCGGCGCCTCCGCTTCCGTGAAGTCCATGTGGGATCGATGGAGCTCCTCGAAAGAGAAGAACCGGCCA
AGACACTGGCTGTGTACGCCAGTGTCACCTAGGCGGTGGCCTTCATGGAACCCAAGCGGTGACGGACTCCCGTGCTCTAA
TTCTCCTTGATGATGGCGGCAGACGCGGAGC---------CGCGGGCCACCGACTCGTCGCTCTCCATGCACCCTGTTTC
TGCCTTTGCCTGCATGGCCCGATCGCAGGCACGGGAGGCGCGGT------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------------
-S---------S----S--------------------------------------S--------S---------------
----------------------------------------S--------------------S------------------
--------------S--SS-------------------------------------------------------------
-----------S------------------------------------S--S----------------------------
----------------S------S--------------------------------------------------------
--------------------------------S-------------------------S--S------------------
---------------S--S------S--S-----------------------------------------S----S-SS-
-S---------S----------S----SSSSSSSSSSSSSSSS-------------------------------------
---------------------------S------------------------S-S---------------------S-S-
S------S---S-------S----------------------------------------------S-------------
-----------------------------S--------------------------------S------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
------------S-S--------------------S---------S--------------------S-------------
-----------------------------------------------S--------S-----SS----S-----S----S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S-----------------------------------------------------S--
-------S------------------------------------------------------------------------
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------SSS-S----S--------S-------S--S-----
-------------------SS-------S--------------------------------------S--S---------
S---------------------------S---------------------------------------------------
--------------------S---------------------------S--------------S------S---------
---------S----------------------S-SS--------------------------------------------
-------------------S------------------S--------------------------S----------S---
-------------------------------SS-------------------------S---S-----------------
---------------------------------------S--------------------------S-------------
-----------------------------S--S--------S--S-----------------------------------
------------S-----S---------------S-S-SSSSSSSSSSSS--------------------S---------
-------------------------S---S--S----------------------------S------SS
>forward_105
--------------------------------------------------------------------------------
-----CTTTACGGCGGTGGTCTTCT-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_2439
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------GTGTGGGATCGACAGAGGTC----------------------
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----------------------------------------------------------------------
