>input_sequence_82629
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-----------------------------------------ATGGCCAAGAGCGGCACGGAGGAGTGGCGTCGCAACGCC
GACACGCACAAGATGAGCCCGGAGGAGGTCCGGGCCGCGGGGGTGGAGGCGTCCATGCGCCCGCCGGGCCGT---GGCGG
CGCCGGGGAGGTCCTGCACCAGCGAGGCGGCCGCCTGCCGTACGGGCCCGGGACGATGGCGCTGATGGGGTTCGGCATCG
TCGGCGCCATCGGCTACCTGGTGCTGTACCAGAAGGCCAGGCCCGGCACGCCGGCCACGGAGGTCGCCAAGGTGGCCGTC
GGACACGGCGACCCTGCCGTCGGCCGCGAGGTCCAGAAGCGCCAAGACGAAACGCAGCCACCGCCACCGCCACGCGAAGG
CAAGTAG-------------------------------------------------------------------------
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>chr5B_1_TraesCS5B01G160800
CTCTAAAAGCAACATAATAAAAATCGTGTTTGCATTCCAAACTTTTGAAAATTCTTATAAAACTTTGGACTACTTATTAA
ACCCTTGAATAGTATATACAGCAGTTCCGCCCTCTCTATATCCCACTAAAAATGTGTTAAAAAATGTTCATCTTCAAAAC
AATTTCAGTTCTATTTTTTTTCAAGATTGTTCAAAAAAATTCAAATAAAGAAATATTCATGTTTTTCAAAAAGAAAAAAT
AAAATCGATTGACAAATTATTTCATAAGCCACTACCGATGTTTATCAAAACTACATGTATGAACGGTTCAAGAAAACTAC
ATGTATGAAATTGTGCATAATGACACACAGAGTAGATTTTACAAGTTTTTTCGTCCGTTGCAACGCACGGGCATTTGTAT
TAGTGAGATATAACGGGACTAAAAAAACCTACAGTAATCTCGATATGGATAGCTATCCGTAGACCCTTCAGACGAGGGTA
GCTTCTGTAAGCGCGATATAGGTCTCGCGGGCCAGCAGAGACTCAGACCACCGCCGAACTTAAAATTAAACTGAAAAGGC
AATCTCTATTGAAAATGAAAAGGATTTAAAATGCAAGCAGACGGGTGTCACAGTTTTGTTTTACTTTACTGTTTGATTGG
GAATACGCTCCATTCAGGCGTTCCGACGCCGCTAGGTTGCCCATGCGCTGTACTTCCGGTCACAGCTTCAATAACTCGCC
ACCGAATGGAGCGCTCACATGTGCACCTCTCAGTAGCGCACGCGGCAGCA-GCTGGCACCGCCTCGTCGAGCTTGCAACA
CCTGCCCCTTGTACGTGTTGCATTCTTTTACACCACCTCATATGAGTCATGACACACTTCACGAAGCTCTCGCTTACATA
CAGCAGCCGTCGCACGAGCCTCCGCCACAGACAGAACCACCCACGCAGAAGACGGATTCACGCAGCACACCACACGCACG
TACTGTACTACGCCGGTGACAAGCGAAAGGAGGACGCAGGCATGGCCAAGAGCGGCACGGAGGAGTGGCGTCGCAACGCC
GACACGCACAAGATGAGCCCGGAGGAGGTCCGGGCCGCGGGGGTGGAGGCGTCCATGCGCCCGCCGGGCCGT---GGCGG
CGCCGGGGAGGTCCTGCACCAGCGAGGCGGCCGCCTGCCGTACGGGCCCGGGACGATGGCGCTGATGGGGTTCGGCATCG
TCGGCGCCATCGGCTACCTGGTGCTGTACCAGAAGGCCAGGCCCGGCACGCCGGCCACGGAGGTCGCCAAGGTGGCCGTC
GGACACGGCGACCCTGCCGTCGGCCGCGAGGTCCAGAAGCGCCAAGACGAAACGCAGCCACCGCCACCGCCACGCGAAGG
CAAGTAGACTAGTTAGTG-GCAGAAGAGCTAGAGGATTTTCGGCGTTTGTGCTTCGAG----CTC-GACTCGATTTGATC
TGCTAGCCGCGCTTCTCAGCTTGGGTACCTTTTGTCGTGGACCATGCACGCGTGTGACTTTCTATCAGAAATGACACAGC
AGAAATAAATAATCGTACTGATGTACTCCCTCCGTCCGGAAATACTTGTCATACATCCTCTTTTATCCATTTTGATGACA
AGTATTTTCGAACGGAGGGAATAGTAGTACTGTATTAGTTGCTTTTAATTTTTGAGAAACTGGCAGTGACGAGTAAAGTT
GTGAAATCAGTATGTAGGGCAGAGTTCACCATCTTCCATCTTTCGGGTGCCGAAAGTAAGGCCAACTCCAACGTGCTGAT
TTTGTCCGCTTTTTGATCGTTTGATTTGTCAGTTGGTCGTGTTCGCCTCATGTTTGTGTCAATCACTGTTTGGTTTGTCA
GTTGGTCGTGTTCGCCTCACGTCTGTGCCAATCTGGGCAGTGTGAACAACCGGTCTTGCCTTTTATTTGCCAAAAGAATT
AAGAATTAAATGTTTTCTGTACGTATAAATTAAATAAACAAATAAAAAGAAAACAAGGCACATAATTAAATAAATAAGTC
ACAATTTTTACAACACAATAAATAAAAATCACACGAAATGAATTTGAAATTATAGCAAAGACACTAAAGAAAAAGGGCAG
ATATAATTATAGCAACTACATCGAAAGAAAAAAATGTATCAATTGATTTTCTATGTAAGTAACATATGCCTAAACTGTTG
GACATATCAACACCTTTTCAATTATATACTAATTCATAAGTAATTAGTAAGCACGACAAAACAACTATTTTTTTTTGAAC
ACAAGAAAAGCACCATCAAGCGCCAAAATTTTATTCAACTCATATGCGGAGTATAGAATGAATTACAAAGCCCTCAATTT
GAAAATTCTGAATCTGGAGCATAGTATGACAAGGGCTATTGCTACGAGCTGGA
>chr5D_618
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---------------------------------------------------------GTTTTACTCTACTGCTTGATTGG
GAGTACGCTCGATTCAGGCGTTCCGACGCTGCTAGGTTGCCCATGCGCTGTACTTCCCGTTACGGTTTTAACAACTCGCC
ACCGAACGGAGAGCTCACATGTGCATCTCCCCGTACCGCACGCGGCAGCA-GCTGGCGCCGCCTCGTCGAGCTTGCAACA
CCTGCCCCTTCTACGTGTTGCATTCTTT-ACACCACCTCAC--GAGTCATGACACACTTCACGAAGCTCTCGCTTACATA
CATCAGCCCTCGCACGAGCCT------CAGACAGAACCACCCACGCAGAAGACAGATTCACGCTACACACCACACGCACG
CACG----TACGCCGGTGACAAGCGGAAGGAGGACGCCGGCATGGCGAAGAGCGGCACGGAGGAGTGGCGTCGCAACGCC
GACACGCACAAGATGAGTCCGGAGGAGGTCCGGGCCGCGGGGGTGGAGGCGTCCATGCGCCCGCCGGGCCGT---GGCGG
CGCCGGGGAGGTCCTGCACCAGCGAGGCGGCCGCCTGCCGTACGGGCCCGGGACGATGGCGCTGATGGGGTTCGGCATCG
TCGGCGCCATCGGCTACCTGGTGCTGTACCAGAAGGCGAGGCCAGGCACGCCGGCCACGGAGGTCGCCAAGGTGGCCGTC
GGACACGGCGACCCTGCCGTCGGCCGCGAGGTCCAGAAGCGCCAAGACGAAGCGCAGCCGCCGCCACCGCCACGCGAAGG
GAAGTAGACTAGTTAGTG-GCAGAAGAGATAGAGGATTTGCGGCGTTTGTGCTTCGAG----TTCTGACTCGATTTGATC
TGCTAGCCGCGCTTCTCAGCTTCGAGTTCTGACTCGATTTGATCTGCACGCGTGTGACTTTTTATCAGAAATGGCACAGC
AGAAATAAATAATCGTAC--------------------------------------------------------------
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>chr5A_640
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-------------------------------------------------------------------------------G
GAATACACTCGATTCAGGCGTTTCGACGCTGCTAGATTGCCCATGCGCTGTACCTCCCGTTACAGTTTTAATATCTCGGC
ACCGAATGGAGGGCTCACATGTGCATCTCCCCGTACCGCACGCGGCAGCTCGCTGGCGCCGCCTCGTCGAGCTTGCGACA
CCTGCCCCTTCTACGTGTTGCATTCTTT-ACACCACCTC--ATGAGTCATGACACACTTCACGAAGCTCTCGCTTACATA
CAGCAGCCGTCGCACGAGCCTCCGCCAGAGACAGAACCACCCACGCAGAAGACGGATTCACGCAACACACCACACGCACG
CACG----TACGCCGGTGACAAGCGGAAGGAGGACGCCGGCATGGCGAAGAGCGGCACGGAGGAGTGGCGTCGCAACGCC
GACACGCACAAGATGAGCCCGGAGGAGGTCCGGGCCGCGGGGGTGGAGGCGTCCATGCGCCCGCCGGGCCGTGGCGGCGG
CGCCGGGGAGGTCCTGCACCAGCGAGGCGGCCGCCTGCCGTACGGGCCCGGGACGATGGCGCTGATGGGGTTCGGCATCG
TCGGCGCCATCGGCTACCTGGTGCTGTACCAGAAGGCGAGGCCCGGCACGCCGGCCACGGAGGTCGCCAAGGTGGCCGTC
GGACACGGCGACCCTGCCGTCGGCCGCGAGGTCCAGAAGCGCCAAGACGAAGCGCAGCCGCCGCCACCGCCACGCGAAGG
GAAGTAGACTAGTTTAGTAGCAGAAGAGCTGGAGGATTTGCGGCGTTTGTGCTTCGAGTTACTTCTGACTCGATTTTATC
TGCTAGCCGCGCTTCTCAGCTTGGGTACCTTTTGTCGTGGACCATGCACGCGTGTGACTTTCTATCAGAAATGACACAGC
AGAAATAAATAATCGTAGATGTA---------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-----S--------
----------S------------------S---------------------------S--S----S--S-----------
-----------S-------------S---S-S---S---------------------S----------------------
----------S-----------------S-----------S---------------------------------------
----------------------------------------------------------------S---------------
S--SSSSS-----------------S-----------S--------S---------------------------------
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---------------------------------------------------S-------S--------------------
S--------------------------------------S----------------------S-----------------
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------------------SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_400
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------------------------------------------------------------CAACGCACGGGCATTTGTAT
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>reverse_1880
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---------------------------------------GTGTGAACAACCGGTCTTGC---------------------
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