>input_sequence_82600
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-------------------------------------------------------------ATGCAGGCGGTGGCGGGCA
TCCGGCGGGGGCTGACCATAGACCCGGCAGGGGAGGAGGAGGCGCCGGCGCAGCGGTTCGGGCGGCTGGTCAGGGAGAGC
CCCGTGGTCATCTTCGCGCGCCGCGGCTGCTACATGGCGCACGTGATGAAGAGCCTCCTCGCGGCCGTCGGCG-------
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------------------------------------------------------------------------------CG
CACGCCACCGTCATCGAGCTGGAGGGCCCCGCCGAGGAGCGCGCGGCGGTGGAGGCCGGCGGCCACGCGGCCGTGCCGGC
GCTCTTCGTCGGGGGCGCTCCGGTGGGCGGCCTGGAGGGCCTCATGGGGCTCCACCTCAGCGGCCTCCTCGTCCCACGCC
TCCGAGAGGTCGGAGCCCTCCGCGCCTAG---------------------------------------------------
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>chr3B_1_TraesCS3B01G123700
GTGTGCTTCAATCCCGGTGGCGTATCGTTCGAAACCCTGCACTGTCATGGGATGAAAGGAAGCTTTGGGAGGTGATGACT
GCTTGTGTGATTATGCACAACATGATCGTCGAGGACGAGCGTGATGAGAGTATCTTCGACCAAGGATTTGATTATCAAGG
TGAAAATATTGAGCCCCTGCACCAAGACCCGGCCACATTTGAACAGTTTGTCCAATTCCACCGTGAGATGCGTGATTGGC
ACACTCATTTGAATCTTCAAAATGACTTGGTTGAGCACGTCTGAGATCACATTGGCAACCAATACATGTATTGGTCCAAT
TTATGTTCAGTCAAGACAATTTCGATTTGGTTGTAAAACTATTTTATTAAAGACAATTTCAATTGGGTTGTAAAACTATT
TTAATTTTCAGACAAATATTTGGGTTGGAAACTAGTTTTGATGTAAATTTGGGCATTTTTGGCTCTGACGGACAGGATGG
GG-AAATGGATGCGGCCGCATGCT-GGGTGCACGGTCACCGCATTTCAGGACAGGTCCGGACACGACTC-CAAATCACTA
CCCAAACAGACAGAAACCGGACAAAACGAACGTCCGTCTGGAATCGCGCGGTGGAGTTGGTCTAATTCGTCTCTCTCCGC
CCGTCACCACCCGTCCGGTGGTAGCCAGGGGTGGGAGGGAAGGAGGATACTTTGGTGCTCTGCTAGTACGTGGTGGTGCT
GAATTTTAATGCCCGCTTTGCTGTCCGTCTCCGGCCACCTGACGCAACCTCAGGCCCCACGGCTCCTTGTCATCGCCCGC
CCGACGTCACCTCCCATCCCATGTGCCCGCTCCGGG-CCCCTATATATAAACGCCTCGCCGGGCTCGCCTCTCCACCTCC
TACGAATCGATACCGATTGATATTCATTCACGGTGGGCACC-------CGTCGTCTGCTAGTTTAGTTGCAAGCAGTGGC
CGCGGCGACCTACCTCACCGTGTCACTT----------CTTCACGGCGGCGGGAGGCGAGCATGCAGGCGGTGGCGGGCA
TCCGGCGGGGGCTGACCATAGACCCGGCAGGGGAGGAGGAGGCGCCGGCGCAGCGGTTCGGGCGGCTGGTCAGGGAGAGC
CCCGTGGTCATCTTCGCGCGCCGCGGCTGCTACATGGCGCACGTGATGAAGAGCCTCCTCGCGGCCGTCGGCG-------
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------------------------------------------------------------------------------CG
CACGCCACCGTCATCGAGCTGGAGGGCCCCGCCGAGGAGCGCGCGGCGGTGGAGGCCGGCGGCCACGCGGCCGTGCCGGC
GCTCTTCGTCGGGGGCGCTCCGGTGGGCGGCCTGGAGGGCCTCATGGGGCTCCACCTCAGCGGCCTCCTCGTCCCACGCC
TCCGAGAGGTCGGAGCCCTCCGCGCCTAGCTAGCAGCTGCTGGATCCTCTCCTCCC---CATCTCCGGCGACTCTCTTGC
ACGTGTGTGTGCACG------------CTTCGTCTTCGTCTTCGTCTCCGTGTATGTACATATGGA---AACCATGAGCT
TTGTAATTTCAAGACTATCAAGGGTGTGGAGTGAGAAACAACAGGATAAATAAGCTGTACCGCACGGGTGGGAAAGACAA
CGAGAT----GAACT-----CTAGCGGGGGTGTTGTGACAAAAAAGGTTGGACCTAAATGTGATTATTACCTTACTTAGG
AC----TACTCCAGCTGTGTTGAGTTTCGCAGACATCATCAGCAACTTAGCTGTTTGAAAAGC-----CCCTCTTTGCTT
GCCCACTTGTTTAAAATCTTGCTTCTGTTTTGTCCTGGTGTGACGTTCTTTGTTTGGCGCT-AATTAACTAGTGATCACC
CCACATGATTGCCGTATAATCATACTTGGAAGCCGATTACTCTATGGCAGGGAGATAACATATTCAAGTACCGGGGTGGG
GGG-TGGGTAATGAAGGGGGACGTCAGCACGAACTTGGAACCCTAATGGCTGCTTTGCCCGGCAATGATCGAAATGCGCA
TCAGTCTCGCTCAGTACGGCGGAACTTCAACCACAAGCTGTGAATG----GCAAGGGTTGGACCTAGCAAGCCTAGCATA
CAAGTATAGAACCAATATTGAGGTCAGATGAACTGAATGAAACTTGTCAAATCCTTTCTAAGAGTAGCACCTCCTTTTTC
TGAATTTAAGACTGGCCCTTCATTAGTGGTACTCCTAGATGATAGATGATACTGTAAGGGCATGTTTGGTTTCAAATAAG
TCACCAACTTATAAGTCGAAAAGTGGAAAAAATAACTTATTTTGTCAAACGTACCCAACTTATAAGTCACCCCAACTTAG
GGCCTGTTTGGTTTCAATAAGTCACCTCACTTATAAGTCAGGTGACTTAAAACCAGTGACTTATAAGTCACGTCTGTTTG
GTTGTCACCTGACACATTTTTCCACACCAAT
>chr3B_1
GTGTGCTTCAATCTCGGTGGGGTTTCTTTCGAAACCCTGCACTGTCATGGAATGAAAGGAAGCTTTGGGAGGTGATGACT
GCTTGTGTGATCATGCACAACATGATCGTCGAGGACGAGCGTGACGAGAGTATCTTCGACCAAGGATTTGATTATCAAGG
TGAAAATATTGAGCCCCTGCACCAAGACCCGGCCACATTTGAACAGTTTGTCCAATTCCACCGTGAGATGCGTGATTGGC
ACACTCATTTGAATCTTCAAAATGACTTGGTTGAGCACGTCTGGGATCACATTGGCAACCAATAGATGTGTTGGTCCAAT
TTATGTTCAGTCAAGACAATTTCGATTTGGTTGTAAAACTATTTTATTAAAGACAATTTCAATCGGGTTGTAAAACTATT
TTAATTTTCAGACAAATATTTGGATTGGAAACTAGTTTTGATGCAAATTTGGGCATTTTTGGCCCTGACGGACAGGATGG
GGCAAATGGATGCGGCCGCGCGCT-GGGCGCACAGCCACCGCATCCCAGGACAGGCCCGGACACGAC-CCCAAATCCCTA
CCCAAACGGACAGAAACCGGACAAAACGGACGTCCGTTTGGGGTCGTGCGGTGGAGTTGGCCTAA---------------
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>chr6B_1
GTGTGCTTCAATCCCGGTGGGGTATCGTTCGAAACCCTGCACTGTCATGGGATGAAAGGAAGCTTTGGGAGGTGATGACT
GCTTGTGTGATTATGCACAACATGATCGTCGAGGACGAGCGTGATGAGAGTATCTTCGACCAAGGATTTGATTATCAAGG
TGAAAATATTGAGCCCCTGCACCAAGACCCGGCCACATTTGAATAGTTTGTCCAATTCCACCGTGAGATGCGTGATTGGC
ACACTCATTTGAATCTTCAAAATGACTTGGTTGAGCACGTCTGGGATCACATTGGCAACCAATAGATATATTGGTCCAAT
TTATGTTCAGTCAAGACAATTTCGATTTGGTTGTAAAACTATTTTATTAAAGACAATTTCAATTGGGTTGTAAAACTATT
TTAATTTTTAGACAAATATTTGGGTTGGAAACTAGTTTTGATGCAAATTTGGGCATTTTTGGCCCTGACGGACAGGATGG
GGCAAATGGATGCGGCCGCGCGCT-GGGCGCACGGCCACCGCATCCCAGGACAGGCCCGGACACGAC-CCCAAATCCCTA
CCCAAACGGACAGAAACCGGACAAAACGGATGTCCGTTTGGGGTCGCGTGGTGGAGTTGGCCT-----------------
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>chr6B_1
GTGTGCTTCAATCCCGGTGGGGTATCGCTCGAAACCCTGCACTGTCATGGGATGAAAGGAAGCTTTGGGAGGTGATGACT
GCTTGTGTGATCATGCACAACATGATCGTCGAGGACGAGCGTGATGAGAGTATCTTCGACCAAGGATTTGATTATCAAGG
TGAAAATATTGAGCCCCTGCACCAAGACCCGGCCACATTTGAACAGTTTGTCCAATTCCACCGTGAGATGCGTGATTGAC
ACACTCATTTGAATCTTCAAAATGACTTGGTTGAGCACGTCTGGGATCACATTGGCAACCAATAGATGTATTGGTCCAAT
TTATGTTCAGTCAAGACAATTTCGATTTGGTTGTAAAACTATTTTATTTAAGACAATTTCAATTGGGTTGTAAAACTATT
TTAATTTTCAGACAAATATTTGGGTTGGAAGTAG--TTTGATGCAAATTTAGGCATTTTTGGCCCTCACGGACAGGATGG
GGCAAATGGATGCGGCCGCGCGCT-GGGCGCACGGCCACCGCATCCCAGGACAGGCCCGGACACGAC-CCCAAACCCCTA
CCCAAACAGACAGAATCCGGACAAAACGAACGTCCGTTTGGGGTCGCGCGGTGGAGTTGGCCTAA---------------
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>chr1B_1
GTGTGCTTCAATCCCGGTGGGGTATCGTTCGAAACCCTGCACTGTCATGGGATGAAAGGAAGCTTTGGGAGGTGATGACT
GCTTGTGCGATTATGCACAACATGATCGTCGAGGACGAGCGTGATGAGAGTATCTTCGACCAAGGATTTGATTATCAAGG
TGAAAATATTGAGCCCCTGCACCAAGACCCGGCCACATTTGAACAGTTTGTCCAATTCCACCGTGAGATGCGTGATTGGC
ACACTCATTTGAATCTTCAAAATGACTTGGTTGAGCACGTCTGGGATCACATTGGCAACCAATAGATGTATTGGTCCAAT
TTATGTTCAGTCAAGACAATTTCGATTTGGTTGTAAAACTATTTTATTAAAGACAATTTCAATTGAGTTGTAAAACTATT
TTAATTTTCAGACAAATATTTGGGTTGGAAACTAGTTTTGATGCAAATTTGGGCATTTTTTGCCCTGACGGACAGGATGA
GGCAAATGGATGCGGCCGCACGCT-GGGCGCACGGCCACCGCATCCCAGGACAGGCCCGGACACGAC-C-CAAATCCCTA
CCCAAACGGACAGAAACCGGACAAAACAGACGTCCATTTGGGGTCGCGCGATGGAGTTGGCCTAACTTC-----------
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>chr5B_1
GTATGCTTCAATCCCGGTGGGGTATCGTTCGAAACCCTGCACTGTCATGGGATGAAAGGAAGCTTTGGGAGGTGATGACT
GCTTGTGTGATTATGCACAACATGATCGTCGAGGACGAGCGTGATGAGAGTATCTTCGATCAAGGATTTGATTATCAAGG
TGAAAATATTGAGCCCCTGCACCAAGACCCGGCCACATTTGAACAGTTTGTCCAATTCCATCGTGAGATGCGTGATTGGC
ACACTCATTTGAATCTTCAAAATGACTTGGTTGAGCACGTCTGGGATCACATTGGCAACCAATAGATGTATTGGTCCAAT
TTATGTTCAGTCAAGACAATTTTGATTTGGTTGTAAAACTATTCTATTAAAGACAATTTTAATTGGGTTGTAAAACTATT
TTAATTTTCAGATAAATATTTGGGTTGGAAACTAGTTTTGATGTAAATTTGGGCATTTTTGGCCCTGACGGACAGGATGG
GGCAAATGGATGCGGCCGCGCGCT-GGACGCACGGCCACCGCATCCCAGGACAGGCCCGGACACGACTC-CAAATCCCTA
CACAAACGGACAGAAACCGGACAAAACGAACGTCCGTTTGTGGTCGCGCGGTGGAGTTGG--------------------
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>chr2B_1
GTGTGCTTCAATCCCGGTGGGGTATCGTTCGAAACCCTGCACTGTCATGGGATGAAAGGAAGCTTTGGGAGGTGATGACT
GCTTGTGTGATTATGCACAACATGATCGTCGAGGACGAGCGTGATGAGAGTATCTTTGACCAAGGATTTGATTATCAAGG
TGAAAATATTAAGCCCCTGCACCAAGACCCGGCCACATTTGAACAGTTTGTCCAATTCCACCGTGAGATGCGTGATTGGC
ACACTCATTTGAATCTTCAAAATGACTTGGTTGAGCACGTCTGGGATCACATTTGCAACCAATAGATGTATTGGTCCAAT
TTAGGTTCAGTCAAGACAATTTCGATTTGGTTGTAAAACTATTTTATTAAAGACAATTTCAATTGAGTTGTAAAACTATT
TTAATTTTCAGACAAATATTTGGGTTGGAAACTAGTTTTGATGCAAATTTGGGCATTTTTTGCCCTGACGGACAGGATGG
GGCAAATGGATGCGGCCGCGCGCT-GGGCGCACGGCCATCGCATCCCAGGACAGGCCCGGACACGACCC-CAAATCCCTA
CCCAAACGGACAGAAACCGGACAAAATGAACGTCCGTTTGGGGGCGAGCGGTGGAGTTGGCCTAA---------------
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>chr7B_1
GTGTGCTTCAATCCCGGTGGGGTATCGTTCGAAACCCTGCACTGTCATGGGATGAAAGGAAGCTTTGGGAGGTGATGACT
GCTTGTGTGATTATGCACAACATGATCGTCGAGGACGAGCGTGATGAGAGTATCTTCGACTAAGGATTTGATTATCAAGG
TGAAAATATTGAGCCCCTGCACCAAGACCCGGCCACATTTGAACAGTTTGTCCAATTTCACCGTGAGATGCATGATTGGC
ACACTCATTTGAATCTTCAAAATGACTTGGTTGAGCATGTCTGGGATCACATTGGCAACCAATAGATGTATTGGTCCAAT
TTATATTCAGTCAAGACAATTTCAATTTGGTTGTAAAACTATTTTATTAAAGACAATTTCAATTGGGTTGTAAAACTATT
TTAATTTTCAGACAAATATTTGGGTTGGAAACTAGTTTTGATGCAAATTTGGGCATTTTTGGCCCTGACAGACAGGATGG
GGCAAATGGATGCGGCCGCGCGCTTGG-CGCACGGCCACCGCATCCCAGGACAGGCCCGGACATGACTC-CAAATCCCTA
CCTAAATGGACAGAAACCGGACAAAACGGACGTCCGTTTGGGATCGCGCGGTGAAGTTGG--------------------
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>chr4A_1
GTGTGCTTCAATCCCGGTGGGGTATCGTTCGAAACCCTGCACTGTCATGGGATGAAAGGAAGCTTTTGGAGGTGATGACT
GCTTGTGTGATTATGCACAACATGATCGTCGAGGACGAGCGTGATGAGAGTATCTTCGACCAAGGATTTGATTATCAAGG
TGAAAATATTGAGCCCCTGCACCAAGACCCGGCCACATTTGAACAGTTTGTCCAATTCCACCGTGAGATGCATGATTGGC
AC-CTCATTTGAATCTTCAAAATGACTTGGTTGAACACGTCTGGGATCACATTGGCAACCAATAGATGTATTGGTCCAAT
TTATGTTCAGTCAAGACAATTTCGATTTGGTTGTAAAACTATTTTACTAAAGACAATTTCAATTGGGTTGTAAAACTATT
TTACTTTTCAGACAAATATTTGGGTTGGAAACTAGTTTTGACGCAAATTTGGGCATTTTTGGCCCTGACAGACAGGATGG
GGCAAATGGATGCGGCCGCGCGCT-GGGCGCACGGCCACCGCATCCCAGGACAGGCCTGGACGCGAACC-CAAATCCCTA
CCCAAACGGACAGAAACCGGACAAAACGAACGTCCGTTTGGGGTCGCGCGGTGGAGTTGG--------------------
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>chr4B_1
GTGTGCTTCAATCCCGGTGGGGTATCGTTTGAAACCCTGCACTGTCATGGGATGAAAGGAAGCTTTGGGAGGTGATGACT
GCTTTTGTGATTATGCACAACATGATCGTCGAGGACGAGCGTGATGAGAGTATCTTCGACCAAGGATTTGATTATCAAGG
TGAAAATATTGAGCCCCTGCACTAAGACCCGGCCACATTTGAACAGTTTGTCCAATTCCACCGTGAGATGCGTGATTGGC
ACACTCATTTGAATCTTCAAAATGACTTGGTTGAGCACGTCTGGGATCACATTGGCAACCAATAGATGTATTCGTCCAAT
TTAGGTTCAGTCAAGACAATTTTGATTTGGTTGTAAAACTATTTTATTAAAGACAATTTCAGTTGAGTTGTAAAACTATT
TTAATTTTCAGACAAATATTTGGGTTGGAAACTAGTTTTGATGT-AATTTAGGCATTTTTGGCCCTGACGGACAGGATGG
GGCAAATGGATGCGGCCGCGCGCT-GG-CGCACGGCCACCGCATCCCAGGACAGGCCCGGACACGATCC-CAAATCCCTA
CCCAAACGGACAGAAACCGGACAAAACGGACGTCCGTTTGGGATCGCGCGGTGGAGTTGG--------------------
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>chr3A_620
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--------------------------------------------------------------TAATTCGTCTCTCTCCGC
CCGTCACCACCCGTCCGGTGGCAG------------GGGTGGGAGGATACTTTGGTGCTCTACATG---GTGGTGGTGCT
GAAAATTAATGGCCGCTTTGCTGTCCGTCTCCGGCCACGTGACGCAACCTCAGGCCCCACGGCTCCTTGTCACCGCCCGC
CCGACGTCACCCCCCATCCCATGTGCGCGCTCCGCCCCCCCTATATATAAACGCCTCGCCGGGCTCGCCTCTCCACCTCC
TGCGGATCAACACCGATCGATATTCATTCACGGCGAGCCTTCTGTCCGCTTCTCCCTAGTTCAGTCGCGA----------
----GCGACCTACCTCACGCAGCGCGGCGCGTCGCTTCCTTCACGGCGGCGGGGGGCGAGCATGCAGGCGGTGGCGGGCA
TCCGGCGGGGGCTGACCATAGACCCGGCCGGGGAGGAGGAGGCGCCGGCGCAGCGGTTCGGGCGGCTGGTCCGGGAGAGC
CCCGTGGTCATCTTCGCGCGCCGCGGCTGCTACATGGCGCACGTCATGAAGAGCCTCCTCGCGGCCGTCGGCGCGCACTG
ATAGCATTAATCTTGACATGAATAGGTTAGTTGGTGGCATAGCCGGCCGCGTCGTGTAGATCGTGAAGTCAGTACGTGGT
TAGTTGGTGCGTAGCCGAGTCAAGTGCATGCGCTTAGTGGTTGTTAGCTAGCGTGGTGCGTCTGTGTATGCATGTTGGCT
TAGTCTTGTGCATGAGTGGCATAGGAGCCGGGCAGGCTGTTGCCCTGGTAGCGTGTGTGCGCGTGTGCTACTTAAACAGA
TGTAGGTGGTAGAGCCAAGAGTAGTCAGAGAGAGATGATGTAGCCTCAAGGAGTGTATGTGCGCTCACGGGTGGGGTGGT
GTGTGTGTGGCAGAGTTCGAGCTCGCCGGAAATACAAGGGGCTGTTCGTGCGGCCGGAGGCGTTTGTGCGCCGGGAAATC
TCGTGTCCTCTCCCTCTCTCTTGTTTCTTTTTTATCTCCGGTGATCGCCGTGGTTCAGTGAGTAGGCTAGACAACAACAA
TTGGTATCATGAGCTTGGTGTCTTGGGCGTGCTTGCCGTGTCGGAGGCGTGGCGGCGGTGGCGGCATTCGCCGGCGGCTG
CACGGTGAAGCTCCAGGCCGTGTGTCGGTCTATGGAGGTGCGCGGCGCGGTGAGGAGGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCACGGTGCGACCGGCGTCGGTGCGCCAGGTCGGGTCCACAGGCTGGC
TCATGGCTGTGACGACGACAACGACGCGAGCTGGATCGACTCTGGCGACGGCAGGCACACGATACGTCGCAGCGGGCGCG
GAGGCGCGTGATGATGTCGAGCGAGGGCGTTTAAGACGACGGTCGACGACAAGGCATGTCAAGATTAGGAAGGAAATTGA
TAGCATTAATCTTGACATGAATAGGTTAGTTGGTGGCATAGCCGGCCGCGTCGTGTAGATCGTGAAGTCAGTACGTGGTT
AGTTGGTGCGTAGCCGAGTCAAGTGCATGCGCTTAGTGGTTGTTAGCTAGCGTGGTGCGTCTGTGTATGCATGTTGGCTT
AGTCTTGTGCATGAGTGGCATAGGAGCCGGGCAGGCTGTTGCCCTGGTAGCGTGTGTGCGCGTGTGCTACTTAAACAGAT
GTAGGTGGTAGAGCCAAGAGTAGTCAGAGAGAGATGATGTAGCCTCAAGGAGTGTATGTGCGCTCACGGGTGGGGTGGTG
TGTGTGTGGCAGAGTTCGAGCTCGCCGGAAATACAAGGGGCTGTTCGTGCGGCCGGAGGCGTTTGTGCGCCGGGAAATCT
CGTGTCCTCTCCCTCTCTCTTGTTTCTTTTTTATCTCCGGTGATCGCCGTGGTTCAGTGAGTAGGCTAGACAACAACACG
CACGCCACCGTCATCGAGCTGGAGGGCCCCGCCGAGGAGCGCGCGGCGGTGGAGGCCGGCGGCCACGCGGCCGTGCCGGC
GCTCTTCGTGGGCGGCGCGCCGGTGGGCGGCCTGGAGGGCCTCATGGGGCTCCACCTCAGCGGCCTCCTCGTCCCACGCC
TCCGAGAGGTCGGCGCCCTCCGCGCCTAGCTACCAGCCGCCGGATCCTCTACTCCC---CGTCTCCGGCGACTCTCTCGC
ACGTGCGCGCGCATGCTTCGTCTCCGTCTCCGTCTCCGTCTCCGTCTCCGTGTATGTACATATGAAGGGAACCATGAGCT
CTGTAATTCCAAGACTATCAAGGGTGTGGAGTGAGAAACAACAGGATAAATAAGCTGTACCGCACGAGTAAG-AAGACAA
CGAGAT----GAACTCTAGCCTAGCGGGGGTGTCGTGACAAAAAAGGCTGGACCTAAATGTGATTATTACTTTACTTAGG
AG----TACTCCAGCTGTGTTGAGTTTCACAGACATCATCAGCAACTTAGCTGTTTGAGAAAAAAAATCCCTCCTTGCTC
GCCCACTTGTTTAAAATCTTGCTTCTGTTTTGTCCCGGTGTGACGTTCTTTGCTTGGCGCCAAATTAACTAGTGATTACC
CCACATGATTGCCGTATAATCATGCTTGGAAGCCGATTAGTCTATGGCGGGGAGATAACATATTCAAGTGCCGGGGTGGG
-GGGTGGGTAATGGAGGGGGACGTCAGCACGAACTTGGAACCCTAATGGCTGCTTTGCGCGGCAATGATCGAAATGCGCA
TCAGTCTCGCTCGGTACGGCGGGACTTCAGCCACACGCTGTGGATGGCAAGCAAGGGTTGGAGCTAGCAAGCCTAGCATA
GGAGTATGGAACCAATATTGAGGCCGGATGAACTGAATGAAACTTGTCGAAACCTTTCTTAGAGTAGCACCTCCTTTTTC
TGAATTGAAGACTGGCACTTCATTAGTGGTACTCCTAGATGATA------------------------------------
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>chr3D_666
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----------------------------GGGAGGGAGGGAGGGAGGATACTTTGGTGCTCTACTAGTACGTGGTGGTGCT
GAATTTTAGTGCCCGCTTTGCTGTCCGTCTCCGGCCACGTGACGCAACCTCAGGCCCCACGGCTCCTTGTCATCGCCCGC
CCGACGTCACCTCCCATCCCATGTGCGCGCTCCGGCCT-CCTATATATAAACGCCTCGCCGGGCTCGCCTCTCCACCTCC
TACGGATCGATACCGATTGATATTCATTCACGGTGAGCACTGAGCAGGCGTCGTCTGCCAGTTTAGCTGCAAGCGGCGGC
CGCGGCGAGCGACCTCACCGTTTCACAT----------CTTCACGGCGGCGGGAGGCGAGCATGCAGGCGGTGGCGGGCA
TCCGGCGGGGGCTGACCATAGACCCGGCCGGGGAGGAGGAGGCGCCGGCGCAGCGGTTCGGGCGGCTGGTCAGGGAGAGC
CCCGTGGTCATCTTCGCGCGGCGCGGCTGCTACATGGCGCACGTCATGAAGAGCCTCCTCGCGGCCGTCGGCGCGCAC--
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---GCCACAGTCATCGAGCTGGAGGGCCCCGCCGAGGAGCTCGCGGCGGTGGAGGCCGGCGGCCACGCGGCCGTGCCGGC
GCTCTTCGTCGGGGGCGCGCCGGTGGGCGGCCTGGAGGGCCTCATGGGGCTCCACCTCAGCGGCCTCCTCGTCCCACGCC
TCCGAGAGGTCGGAGCCCTCCGCGCCTAGCTAGCAGCCG---GATCCCCTGCTCCCCGTCGTCTCCGGCGACTCCCTCGC
ACGTGCGCGTGCACGCTT------------CGTCTCCGTCTCCGTCTCCGTGTATGTACATATGAAGGGAACCATGAGCT
CTGTAATTTCAAGACTATCAAGGGTGTGGAGTGAGAAACAACAGGATAAATAAGCTGTACCGCACGGGTGGGAAGACAAT
CCGTAGGATGGAACT-----CTAGCGGGGGTGTTGTGACAAAAAAGGTTGGACCTAAATGTGATTATTACTTTACTTAGG
ACCTACTACTCCAGTTGTGTTGAGTTTCACAGACATCATCAGCAACTTAGCTGTTT--GAAAAAAAATCCCTCTTTGCTT
GCCCACTTGTTTAAAATCTTGCTTCTGTTTTGTCCTGGTGTGACGTTCTTTGTTTGGCGCTAAATTAACTAGTGATTACC
CCACATGATTGCCGTATAATCATGCTTGGAAGCCGATTAGTCTATGGCAGGGAGATAACATATTCAAGTACCGGGGTGGG
-GG-TGGGTAATGGAGGGGGACGTCAGCACGAACTTGGAACCCTAATGGCTGCTTTGCCCGGCAATGATCGAAATGCGCA
TCAGTCTCGCTCGGTACGGCGGAACTTCAACCACAAGCTGTGAATG----GCAAGGGTTGGACCTAGCAAGCCTAGCATA
CAAGTATGGAACCAATATTGAGGCCAGATGAACTGAATGAAACTTGTCAAATCCTTTCTAAGAGTAGCACTTCCTTTTTC
TGAA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>SNPs
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S--------------------S---------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------S-------S------S--------SS---------S--------------------S---
-------------------------------------S---S------------------S-------------------
---------------------S--SSSS---S--------S--------------------S------------------
--------------------------------------S-----------------------------------------
--------------------------S--------S--------------------------------------------
----S------------------------------S----S-----------------S-------S-------S-S---
--------------------------S-----------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------S-----------------------------------
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------------------S-------------------------------------------------------------
-------------------------------------S--S---------S---------S----------------S--
-----S-S---------------------S-----S-----S----------------------S---------------
S-------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
----------------------------S-----------------------------S--SS-----------------
----------------------------------------------------------------------------S---
-----------------------S---------------S----------------------------------------
S------------S------------------------------------------------------------------
------------S-------------------------------------------------------------------
-------S---------------S--------------------------------------------------------
------S---------S---------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_557
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CCGGACACGACTCCAAATCA---
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-------------------------------
>reverse_3853
--------------------------------------------------------------------------------
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------------AGTACGGCGGAACTTCAACC------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
