>input_sequence_82554
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--------------------------------------------------------ATGGGGTTACCGACGCACGACGCT
TTGACCGACA---------CCGTCACCGCTTCCCCCGCCGCCGGCCCCGCCGAGGACACTTCGACGGACGCTTCTGGCGC
GCCGAGCCGCCTGTACCGCGCGTTCAGTCGCGCCCGCGATGTGCTGGCACCCGTATACCAGACGCTTAGGTTCGTCGGCA
GCGTTGCCCAACTTGTCGTCGGCGTGATGGAAATTGCTCGGGACGTGCGCTATGTCGCAAATTGTGCAAGAGGCGCTCTC
TACCGCGGACGCGGTGGCGACCCTCCCGCTGAAGGTGGTCATGCTCTGGAGTCAGGACCGCAGCGGCAGGCTCCCGTCGA
CGGTGACGGTGACGGTGCTTCAGTCAAGTAA-------------------------------------------------
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>chr7A_1_TraesCS7A01G165400
AAAAATAAGAAACAGAAAAGAAGAAGAACAAAATGAAAAAGATAAAGGAAAGAAAAAACCAAGAAAAGAAGGAATAAACC
GGTTCAGGGAAGATTCCTCCCAAAACCGTGGGATAAAAACCAGTATGGACCGGCTCAGGTGTACGCGCCAGGTTGCTTTT
TGGTGACCTACGCGCCCATG-GGGGCCGATTTTGGTGTTTTGACTCTTTTACGAAAGTTGA-------------------
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-----------------GCCAGATTTGACCCTAGTTTAGATTTTTTTTTGGATCCGGCCCTTTTTTCACCATCAGGGTCG
ATGGCGGTAGGGTATATCAGT--CTACTGCCAAGGACCCTGATGGTAGGCAACTTATCTACGTCAGTGTAGTGCAGCCCT
ACCGTCAAATAGGCTGTCAGTAGCCTGTGCAATCCTACCGCCGAGGTGCCCGACGGTAGTGTG--------CAGTATTTG
ATACTTGATATTTTTTTTACGATAAGGCATGCACCTCTACCGCCAAGGGCCTTGGCGATAGATTATTATACCCTATCGTC
ATTAACCTCGGCGGTAGGAAAAGGGTCACGTCTCAAAAAAATTCCGAACCAGAGTCAGATCTTGCTCAACTTTCGCAAAA
GGATCAAAACATCTCAATAGGACTGGCTGGGCCGGCCGCTACAGTAACGATCGCTACGTTTCTTTTCCGGCCGT------
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-------------------TGTTTCTTCTAGTTGGGCCGAGCCAGGTAGGGACG---------TCCGATCGACCTTTTGA
CGCACTTAGCGTCACATAGCAGCTCCCCTTCTCGCCCTCATCGGAAAA-------AAAGTTCTTCTCTGTTCTGCCTCT-
------TCTCTTCGCCGGTTAAAGAGAACCCGACTTGGAATCTTGTAGGACTCCGAGGCATCGTTGAGGTCCTATTCGGA
ACTTGGATCGACATCTCATCGTGATAAATAGTAAGTCCCAATCGA-CTCCCAAACGCGTTCCGCTATCCGCCCGAGACAG
AAATCCACGATCACAACGCCTCCGCCGCCGGCCACCGGAGATCACCAGAGACAGACATGGGGTTACCGACGCACGACGCT
TTGACCGACA---------CCGTCACCGCTTCCCCCGCCGCCGGCCCCGCCGAGGACACTTCGACGGACGCTTCTGGCGC
GCCGAGCCGCCTGTACCGCGCGTTCAGTCGCGCCCGCGATGTGCTGGCACCCGTATACCAGACGCTTAGGTTCGTCGGCA
GCGTTGCCCAACTTGTCGTCGGCGTGATGGAAATTGCTCGGGACGTGCGCTATGTCGCAAATTGTGCAAGAGGCGCTCTC
TACCGCGGACGCGGTGGCGACCCTCCCGCTGAAGGTGGTCATGCTCTGGAGTCAGGACCGCAGCGGCAGGCTCCCGTCGA
CGGTGACGGTGACGGTGCTTCAGTCAAGTAAGCAGCTGGCCAGATCGTGTATAGCTGTCCTCGATCCATGCCGCTAAGCT
ATAGGGTAGTGATAATATTCTGCGGTATTTGGGACTTTGGCTACTCCACTGTTCTGCATTATTAGAAGGCTAAATATATC
AGTTTGTCTAATTCACGTCTAGATGTTTTTTAAGGATGTCACATCTAAACTCCCATAAATAACACAACAACATGGAATAA
AAAATATGGAGCAAAAAAATAAAATAAACCACAAACACAGTGGACACAAGGTTAGATGTGACATAATTATGTCACATTTA
GATGCGTCCTAGATAGACCCTAAATATATTTACTGTAAGTTTGAGTTATTTGATGAGGCATCGTCTTCTCTCCGACTCTC
CGTAGTACCTTCACGTTCGTATGTCTTAATGATTATTATGTACTCCATGCATAGAACATTGTGCTATAATACTCTATAGT
ATAATGTTAAGATGTTTATGGTCATTTGAAGATGAATTAGCTGTCCCTACAGTTTGTTTGGCTTTGCTCTTCG--AAAGG
CTTGGCT-------------------------------------------------------------------------
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------------------------------------------------------------------------AGCCCAAG
GATGTTTTCTCGTTTGCTCTTCTTCTTTTGGGCTGTAAGCTTCGCGACATCCTGAAGCTTCTTGTGTGATACAAATACAA
AGTAACACGATTTTTGTTGATTGTTCGAGGAAAGAATGTGTTACTCCCTCCAATCCAAATACTAAAATCACGACACTTAT
TTTGGATCAGAGGGAGTACATGTTTATTTCATACTGTCTCTTATGTCTTTATTACTGTGAGTTATACCTCCAACAAACAA
AAAAACAATATTTGAAGGACATCATCTTGAATTTCATTCTCTGAAAAGGATTGAGCCAAGGAGGAAAGTTGCGAGACTTG
GTAAGGTAAGATGTCATTGATGTCGAAGTTCCTGGTAGTGTCCAGGGCTAGGCCAATTTCCATCGCTCCCGCGGGCAATG
TGGGGAACCCTAGCCGCCGCCCGAGCCCCCGCCTCCCTCCTGCCTCCCGGGCAGCCGG
>chr7D_1
AAAAA-AAGAAACATAAAAGAAGAAGAACACAATGAAAAAGATAAAGGAAGGAGAAAACCAAAAGAGGAAGGAATAAATC
GGTTCAGGGAAGATTCCTCCCAAACCCGTGGGACAAAAACCAGTATGGGCTGGCTCAGGGGTACACGCCAGGTTGCCTTT
TGGTGACCTACGCGCCCAATAGGGGTCGATTTTGGTGTTTTGACTCTTTTACGAAAGTTGAGCTTAGGGCTGGAATTCTA
GCCGAGTCGAGCCAGCTCGCTAAAGCTCGTATATTTAACGAGCTAGCTCGACTCGACTCGTTACTATAACAAGCTCAAAT
TCAAGATTGGCTCGACTCGTATAACTCACGAGCTGGCTTATTTAGCTTGTTAAGCTCGTTAAAGATCTGAACATAAAATC
TTACGAACATGATAAAAATGATTACTTGAGAATGTATAATGTACATATTAAACATGTACAATGTTCACAAAAAATTGTAA
GCATGTACGAGCATCATTAACAATTGTCAGTACCATCAACGGTGTAGGTGCAGCGCGCCGCCGTCATGATTCATAGGAGA
AACAAATAGGGAAGACAGGAGGGAAATCGACCACCTATAATTTCGCTAGGAATAGAAATGGAATGAGAAAAATCGTTGTG
TGCGACGTGTGAGTCTCCTGGGCAGTTGGGCCTTGTGTTGTGCGTCTAGGACATCGAGTGCTTGGTTGATCTTTTGTACC
GAGCCTAACGAGTTACATGAGTACTCGTGAGCTCGGCTCGTTTAACTTGGTTTATAAACGATCTTAAACTAGAGCTCGAC
TCGACTCGTTATTTTTCGAGTTCGAGTCGATTCGAGCCGAGTCACGAGCTACTCGTTTAGCTCGCGAGCTTCGAGGTTTT
TTTCCAGCCCTAGTTGAGCTAGATTTGACCCTGGTTCGATTTTTTTCCGGAATCCAATCATTTTTCTACCGTCGGGGTCG
ATGATGGTATATAGTATACCAGCCTACCGCTAAGGTCCCTGACGGTAGACAACTTATCCACGTCAGTGTAGTGCAACTCT
ACCGTCAAACAGGCTGGCAGTAGCATGTGCAACCCTACCGCCAAGGTGCCCGGCGGTAGTGTGTACAAGCACTGTATTTG
ATACTTATTGTTTTTTACGG--TAGGGCATGCGCCTCTACTGCCAAGGGCCTCGGCGATAGGCTATTATACCCTACCGCC
ATTAACCTCGGCGGTAGAAAAAGGGTCAGATCTTGAATTTATTTCGAATCAGGGTCAGATTTGGCTCAACTTTCGCAAAA
GGGTCAAAACACCCCAATAGGACTGGCTGGT-CGGCCGCTACAGTGACGGTTGCTACAATGTTTGTTTTTCAGCCATTGT
TTCTTCTATTTTTTTAACACTGTACAGACGCATACACTCATCCCTATGAACGCACACACGCACACCCTATCCTTATGAGC
ACCTCCGAAATACTGAGCCGACATATCATCTTGAAATTTACTAAGTCACTGTAGGCACCTCATCGTTGACGGGAACGTCT
CCTTCCACTGAATGCGCATCGCCGGAAATCCTGAAATAAATGCGAGCATCAGGACTTGAACCCTGGTGGCTAACCATCCA
GCCATAGGTTGGTTCGTTTTGTTTCTTCTAGTTGGGCCGTGCGAGGTAGGGACG---------TCCGATCGGACC----A
CGGACAGAGCGTCAGATAGCAGCTTCCGTTCTTGCCCTCATCGGAAAAAAGGAAGAAAGTTCCTCTCCGTTCTGC--CTC
TTAAATTCTCTTCGCCGGTTAAAGAGAACCCGACTTGGAATCTTGTAGGACTCCAAGGCATTGTTGAGAACTTATTCGGA
ACCTGGATCGAAATCTCATCGTGATAAAT---AAGTCCCGATCGA-CTCCCAAACGCGTTCCACTATCCGCCCGAGATAG
AAATCCACGATCATAACGCCTCCGCCGCCGGCCGCAGGAGATCGCCAGAGACAGACATGGGGTTACCAGCGCACGACGCT
TCGACCGAGGACGCCCACGCCGTCACCGCTTCCCCCGCCGCCGGCCCCGCCGAGGACACTTCAACGGACGCTTCTGGCAC
GCCGAGCCTCCTGTACCGCGCGTTCAGTCGCGCCCGCGATGTGCTGGCGCCCGTAGTCACCACGCTTAGGTTCGTCGGCA
GCGTTGCCCAACTTGTCATCGGCGTGATGGAAATTGCTCGGGACGTGCGCTACGTCGCCGATTGTGCAAGAGGCGCTCTC
GACCGCAGACGGGGTGGCGACCCTCCCGCTGAAGGTGGCGGTGCTCTAGAGTCAGGACCGCAGCGGCAGGCTCCCGTCGA
CGGTGACGAATCCGGTGCTTCAGTCAAGTAAGCAGCTGGCCAGATCGCGTGTAGCTGTCCTCGG----------------
-TAGGTTATTGATAATGTTCTGCGGTATTTGGGACTCTGGCTACTCCACTGTTCTGCATTATTAGAATGCTAAATATAT-
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-----------------------------TTACTGTAAGTTTGAGTTATCAGGGGACCTCGTCTCA-CTCCCCGACTCTC
CGTAGTACCTTCACGTTCGTATTTCTTAGTGATTATTATGTACTCTATGCATAGAACATTGTGCTAC----------AGT
ATACTGTTAAGATGTTTATGGTCATTTGAAGATGAATTAGCTGTCTCTACAGTTTGTTTGGCTTTGCTCTTCG--AAAGG
CTTGGCT-------------------------------------------------------------------------
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------------------------------------------------------------------------AG-CCCAG
GATGTTTTTCCGTTAGACTTTCTTCTTTTGCGCTGTAAGCTTCGCGACGCCCTGAAG-----TGTGTAATACAAATACAA
AGTGACACGATTTTTGTTGATTGTTCGAGGAAAGAATGTGTA--------------------------------------
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-------------------ATGTCAAAGTTCTTGGTAGTGTCCAGGGCTAGGCCAATTTCCATCTCTCCCGCGTGCGACC
GGGGAAACCCTAGCCATTGGCCGCGCCCCTGCCTCCCCTTCCCTCC------------
>chr7B_655
CTTTC---------------------------------------------------------------------------
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------------------------------------------------------------------CCGGTCGC------
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-------------------TGTTTCTTCTAGTTGGGCCGGGCCAGGTAGGGACGCTATGTGGGTCCGAGCGACCTGTTGA
CGCACAGAGCGTCACATAGAGGCTCCCGTTCTCGCCCAAATCGGGA------AAGAAAGTTCCTCTCCGTTCTGC--CT-
------TCTCTTCGCCGGTTAAAGAGAACCCGACTTGGAATCTTGTAGGACTCCGAGGCATTGTTGAGATCCTATTCGGA
ACTTGGATGGAAATCTCATCGTGATAAAT---AAGTTCCAATCGAACTCCCAAACGCGTTCCACTATCCGCCCGAGATAG
AAATCCACGATCATAACGCCTCCGCCGCCGGCCGCCGGAGATCGCCAGAGACAGACATGGGGTTATCAACGCACGACGCT
TCGACCGACGACGCCCACGCCGTCACCGCTTCCCCCGCCGCCGGCCCCGCCGAGGACACTTCAACGGACGCTTCTGGCGC
GCCGAGCCGCCTGTACCGCGCGTACAGTCGCGCCCGCGATGTGCTGGCACCCGTAGTCACCACGCTTAGGTTCGTCGGCA
GCGTTGCCCAACTTGTCGTCGGCGTGATGGAAATTGCTCGGGACGTGCGCTACGTCGCCTATTGTGCAAGAGGCGCTCTG
GACCGCAGACGCGGTGGCGACCCTCCCGCTAAAGGTGGCGGTGCTCTGGAGTCAGGACCGCAGCGGCAGGCTCCCGTGGA
CGGTGACGAATCCGGCGCTTCAGTCAAGTAAGCAGCTGGCCAGATCGTGTGTAGCTGTCCTCGACCCATGCCGCTAAGCT
ATAGGGTAATGATAATATTCTGCAGTACTTGGGACTCTGGCTACTCCACTGTTCTGCATTATTAGAAGGCTAAATATAT-
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-----------------------------TTACTACT-----------------------------------CGACTCTC
CGTTGTACCTTCACGTTCGTATTTCTTAGTGATTATTATCTACTCTATGCATAGAACATTGTGCTA----------TAGT
ATAATGTTAAGATGTCTATGGTCATTTGAAGAAGAATTAGCTGTCCCTATAGTTTGTTTGGATTTGCTCTTTCGAAAAGG
CTTGATTTTTTTTAAAAGGAGGATGATCCCTCTGCATCTGGGCGATGCATGCAGTCATTTTATTAATTGTTCACAAGACT
TCTATTGCTACTTCTATCCATTTGATGAAGGGGTGCCGAATGTTCGAGCCGAATATCAAATAGACCTCGCATCAGAGGCT
AACATCTAAAGACGGAGGCCCCAACCAAGCCTCTTGCCGGGTCTGGGGCACACGCCGGTCCGGCGCACTTTCAG-CCCAG
GATGTTTTTCCGTTTGATTTTCTTCTTTTGCATTGTAAGCTTCGCGACATCCTGAAGCTTCTTTTGTAACACAAATACAA
AGTGACACGG-TTTTGTTGATTCTACGAGGAAAGAATGTGT---------------------------------------
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>SNPs
-----S--------S---------------S-------------------S--S--------S-S-S-----------S-
------------------------S--------S--------------S-S--------S----S-----------S---
------------------SS-----S------------------------------------------------------
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-------------------S------------S---SSSS------SSS-S----SSS-S-----SS---S--S------
---SS----SSSSS---SSSS------S--S----S------S-----S---------S----------------S-S--
---------S------S-------S-------S---------S---------S-------------------S-------
------SS-S------SSSSSS--S-------S-------S-----------S--------SS------------S--S-
-----------------S----------SS---SS--SSS---S----S---S-------S-S-----------------
--S--------S-S----------------SS-------------S---S-S-----SS-SS--S--------S------
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---------------------------------------S-----------------------------------S----
-----SS--------------------S----------------------------------S----S-------SS---
-------------------------------------------------------------S------S-----------
-----------S-----------------SSS------------------------------S--------------S--
-------------S-------------------S---------S-----------------------S------------
-S-------S----------------------------------------------------S-----------------
-------------------------------------------------------SS-SSS-------------------
----------------------------------------------------S-----SS--------------------
S-----S-------------------------------SSS---------------------------------------
--------SSSS--------------------------------------S-------------S---------------
--------S---------------------------S------------------------------------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------SS-SS--SSSSSSS--SS---S---------
----------------------S-----S----------------S--------------------SSSSSSSSSS----
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--------------------------------------------------------------------------S--S--
--------SS------S-S-----------S------------------------------------S------------
---S-------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS-----S------S--------------------------------S--------S--S-SS
S---S----------SSS-S---S-----S-------SSSSS-SS-SSSSSSSSSSSS
>forward_1183
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-------------------------------------------CAAGGGCCTTGGCGATAGAT-----------------
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>reverse_2697
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--------------------------------------------------------GGCATCGTCTTCTCTCCGAC----
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