>input_sequence_82553
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-------------------------------------------------------------ATGCTCTCCCAAGGCTCAG
CATACTCTGTGTACATGGTGTACAAGTTAGCCAACGATTCATATGGGTTGACCGACGGTTACTACGGCCAAGAATTGCCG
GTCCAGAAGGCATCAGTGAGCGTTGGAGGCACTCACCAAACCCGCAAGGTCTGCCTCCAACCTAACCCGCAAAGAAGCAT
GAGACGGAACTATCATGCAGCGCTTCCTCGCAAAAGAGCTGATGGTTGGATCGAGCTGGAGCTGGGCGAGTTTATTTGCG
AGGGGCACGAATATGGCGATGTGTCCTTCGGTCTGTCAGAGATGAATGATTTGAGAAGGAAGAACGGTCTTATCGTGCAG
GGTATTGAGATTAGGCATAAGATTTGA-----------------------------------------------------
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---------
>chr7A_1_TraesCS7A01G063500
TTTTCTGCGAAGACTTGAGAAGACTTGATATTTTCAAATGCAGTTGCTTCGCCCCAAATGAAATAGATTTCCTTCCGTTC
CTACTTCCAAATTCTTCGTCGTCTCCCCC-------------------AAAACTAAATGGAACCGAGGAGACCGACCAAG
CCGGCCGCAGAGGAGGAGGGG---CCGATGGAGGCC------TGTGAGGTCACCCGCCTGCAAGAGGAGCTCTTGTGGGC
AGCGCTGTCCAGCACGTCACCTCGCGACGCCTGCCGTGCCGCAGCGGTCTCCCCGGCCTTCCGTGTGGCGGCCGACTCGG
ACGCTCTCTGGGCCTGCTTTCTGCCCTGCGGTCGTGACCTTCCGCCGCTCGCTGACGGAGAGTCGACGCCAT--------
-GCAGGAAGAAGGACCTGTTCCTCCGCCTCTCCGGCAGCCCCGTCCTCCTCCCATGCGGACTCGTGGTACGTATACACGG
TAGCCGGATCACCCAGCTCAACAATAAATTTGGTTTTCGG---GCTAATCATACTTGTCGCATC--------CAGAGCAT
GTGGCTGGACAGGGAGACC-------------------------------------------------------------
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---------------------------------------------------------------GGCGCCAGGTGCTACAT
GGTGCCGGCGAGGGAGCTGTCCATCGGATGAGGCAC------------------------------TCTCGCCGACTCGA
GGTACTACCTTCCCTCATTCCGTTATTCTGTTCTTCGAGTTCCGTTGCAGCTAGC----TTATGTTGCTCAATGAACAAT
GGTGCTAGCACATATATAGTCA--------------------GAACATTGGATAATGATCCATGACTGAGTCATGACTAC
ATG-----------------------------------------------------------------------------
-------------------------TATG---------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TAT
GTGGAATTAAACTATCATGAAAGAAAGTAGCAGTTA--------------------------------------------
-TTAGTTCCCATCATCAGTGAGCTTTGCAACTTTTGTTCTCTCTGTGCACATTTTGTAGCGATGCTATCTAGCTAAATGG
GTGCAACTTAATTATGATATTTTTTGATCTTCATCTTCGTTATGAATCCTAAACCTATACGTATTCGACTCTAGGTTTTC
CGAGAGTGCTCAACTCAGACTAGTTTCCTGGCAGTATATCCGCGGCAAGATACATAGCAAGATGCTCTCCCAAGGCTCAG
CATACTCTGTGTACATGGTGTACAAGTTAGCCAACGATTCATATGGGTTGACCGACGGTTACTACGGCCAAGAATTGCCG
GTCCAGAAGGCATCAGTGAGCGTTGGAGGCACTCACCAAACCCGCAAGGTCTGCCTCCAACCTAACCCGCAAAGAAGCAT
GAGACGGAACTATCATGCAGCGCTTCCTCGCAAAAGAGCTGATGGTTGGATCGAGCTGGAGCTGGGCGAGTTTATTTGCG
AGGGGCACGAATATGGCGATGTGTCCTTCGGTCTGTCAGAGATGAATGATTTGAGAAGGAAGAACGGTCTTATCGTGCAG
GGTATTGAGATTAGGCATAAGATTTGAGGAGGCATCCACACCGAGTCCCGAGCCAGTCCCGATGGACAGGGC-GACACAC
AACCCAATGGCTGGTGACGGCCTCCACCGAGTGATG-AGTGTTGTTTTTGCGCTCATCACACTGCTGTCTAAATCAGATA
ATTATCCCAGTATTTTTTAGAAATTCACTCTGATGTTGTCACTAATGACTAACGAATGCGAGAGATCGTGAAATTTTTGG
TTTAATATGTTTCTGCAGGACCTAAACATGGAAAGAAAACATCACTTATGAGGAAAAAATAAAAATGAAGTAAGGAATGA
AGGAATTGGAGGCATAACAAAGCAACCAGAGTGCAAGAGTGCATTCGGTACGAGTGAATGCTTGTACCGAACTCGAGAAG
CACTAGTGCAGAACCGGGCAATAGCACCGGTTCGTAAAGCCCTTTAGTGCCGGTTCCATAACCGGCACTAAAGTGTGGGC
ACTAAAGGCCCCCCTC---CCTTTAGTACCGGTTCAGCACGAACCGGTGCTAAAGGGAAACCACGTGGCACGAGCCAGCT
CCAGGGGCCGGGAGCCCTTTAGTACCGGTTGGTAAATGTTTGT------------------------GGGTTTTATTTTA
TTTTGTATTTTTCAATTAAATTTGTGTTATCAATTTAATTTAGGATTGTTTTACGTTATAATGAGTTGTAGT--------
----------CG------TCGTCATCATCATC---ATCATCACATATTAATAAATAAATAAATTCTAGCTAGCTAAAAAT
TATCGTAGTCGTC--TAATTAC--------CACTATTTAATCATCATAGTCATTACCGC--TAGCTATCTAATCATCACC
AACACTGGCTAGCTTAAAGAGGAAACATTCACTTTGTAACAGAAGCAAAGATATAATCGAGTTCAACATAATCATCACCA
ACATCAAAGTTCAGGACA---CGGACATGA-----GACA----CTAATTA--------AGAGCATGAACTAG--------
------TGCTGCTCCCTCTCAGGTAGAATAGCATAGAACATGTATAGCTCTCCTGATTCATCATACTGGAGCATGCTGAT
GAATCTGTC
>chr7A_1
TTTTTGCAAAGACCTCGACAAGACTTGACATTTTCAAACGCAGTTGCTTCGCCCAAAATGAAATCAATTTCCTTCCATTT
CCGCTTGCAAGTGCTTCGTCGATAGTCGTCTCCTCCACCTCCAAAACTAAAACTAGATGGAGCCGAGGAGACCGACCAAG
CCGGCTCCGGAGGAGGAGAAC---GAGATGGAGGCA------TGCGAGATCACGCGCCTGCCCGAGGAGCTCCTGTCGAC
AATCTTATCCCGCACGTCGCCGCGAGATGCCTGCCGCGCCGCAGCAATCTCCCCAGCCTTCCGCGGGGCGGCTGACTCCG
ACGTCGTCTGGGCCTGCTTTCTACCCTGCGATCGTGACCTCCCACCGCTCGCTGACGGAGAGCAGCTGCCAT--------
-GCAGGAAGAAGGACCTGTTCCTCCGCCTCTCCGTCAGCCCCGTCCTGCTTCCAGGCGGACTCGTGGTACGTACACACGT
TAGGCGGATCACCCAGCCCAACAACAAATTTTGTTTCTG---AGCTAATCAATTG-GTCGCATC--------CAGAGCAT
GTGGCTGGACAGGGAGACC-------------------------------------------------------------
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---------------------------------------------------------------GGCGCCGGGTGCTACAT
GGTGCCGGCGAGGGAGCTGTCTATCGGATGGGGCGC------------------------------TCTCGCCGACTCCA
GGTAC---CTTCCTTCCTTCCCTTACTCTGTCCTTTGAGTTCCGTCGCAGCTAGCTTAATTATGTTGGTCAATGAACAAT
GATGCA--------CGTCTAATTCCATACTAGTATACACTCGAAATATTTAATCGTGACCCATGACTGAGTCAAGACTAC
ATTA----------------------------------------------------------------------------
-----------------------TATATG---------------------------------------------------
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-----------------------------------------------------------------------------TAT
GTGGAATTAAACCATCATGAAAGAAAGTACTCACTCCGAAAATAAATGTCGTGGATTTAGATCAAACGGAGGGAGTAGCA
GTTAATTCCTATCATCAGTTAGCTTTGCAACTTTTTATCCCTCTGTGCTAGATGGGTTTTATC-----------------
---CAACTTGGTTATGATATCGTTTGGTCTTCATCTTTGTTACTAATCCTAAC-GTATATGTGTTCGACCCTAGGTTTTC
CGAGAGTGCTGAACTCAGACTGGTTTGTTGGCTGTATATCCGCGGCAAGATAGATAGCAAGATGCTCTCCCAAGGCTCAA
CATAATCAGTGTTCATGGTGTACAAGTTACTCAACGATTCATATGGGTTGGCCGACGGCTACTACGGACTAGAATTGCCA
ATCCAGAAGGCATCAGTGAGCGTTGGAGGCTCCCACCAAACCCGCAAGGTCTGCCTCCAACCTAACCCACAAAGAAGCAT
GCGACGGAACTGTCATGCAACGCTTCCTTGCAAAAGAGCTGATGGTTGGATGGAGCTGGAGCTGGGCAAGTTTGTTTGCG
AGGGGCATGAAGATGGGGACGTGTCCTTCGGTCTGTCAGAGATGAAAGATTTGAGAAGGAAGAACAGTCTTATCGTGCAG
AGTATTGAGATTAGGCATAAGATTTGAGGAGGCATCCATGCCCGAGTCCTAGCCAGTCCTGGTGGACAGGGGGGACACAC
AACCCAGTGGCTG-CGATGGCCTACTCTGAGTGATAAGGTGTTGTTTTTGCGCTCATCACACCGTTGTTTAAAGCAGATA
---ATCCCATAATTTTTGAGAAATTCACTCCGATATTGTCACTAATGAGTAATGAATGCAAGAGAACGTGAAATCTCCGG
TTTAATATGTTTCCGCGGGACCTAAACATGGAAAGAAAACATCACTTATGAGGTAAAAG---AAATGAAGGTAGAAAGGA
AGGAATTGGAGGCACAACAAAGCAACCAGAGTGCAAGACGGCGTTCGGTACGAGCGAACGCTTGTACCGAGTTCCAGAAG
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>chr4D_130
AGATCGAACA----------------------------------------------------------------------
----------------------------------------------------------------------------CAGC
CAGGCCGCGGAGGCGGAGGAG---CCGATGGAGCCCGGCCAGTGCGAGATCGCGCGCCTGCCGGAGGAGATCCTGTCGGC
GGCGCTCTCCCGCACGTCGCCGCGCGACGCCTGCCGCGCCACCGCGGTCTCCCCGGCGTTCCGCGCCGCCGCCGACTCCG
ACGCCGTCTGGGCCTGCTTCCTGCCGCCGCCCGCCGCCCTCCCGCCGCTGGCCGACGGAGAGCTGCTTCCGCCGCCGCCG
CGCGGGAAGAAGGACCTGTTCCTCCGCCTCTCCGGCAGCCCCGTCCTCCTCCCAGGCGGACTGGTATGTAT-----ATAC
ACATACAACTAACCCCTGG---AACAAATTTGGTTGACCGCTAGCCAATCAACTCAAAGTGGCGCCATGGTGCAGAGCAT
GTGGCTGGACAGGGCGAGC-------------------------------------------------------------
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---------------------------------------------------------------GGCGCCAAGTGCTACAT
GGTGCCGGCGAGGGACCTGTCCATCGCGTGGCGCGACACGCCGCGCTACTGG---TCCTGGATCCATCTCACCGACTCGA
GGTTT---CTTGCCATCCTCCTTTGGTCT-----------TTCCTTGCAGCTAGA----TTCTGTTGCAATCATTAATTT
TGATAGTG---------------------------CTTATAATTGCAAGTGGAAGTGCTAGGATGCAGGGTAGTAGATAG
TATATGAAACTGCCACGAGGGCCAAAACCCAGAATATTCAGTAGCCATGAAAAAACTAGCAGCGAGTTCAGCAAAGTTTG
CAATTT-AATTTGCCCTGTTGAGTACTCCCTCCATTTCTAAATATAAGAC-TTTTATAGATTTCAATATGGACTAACATA
CGGATGTATATAGACATATTTCTGAGTGTAGATTCACTCATTTTACTCTATATGTAGTCTGTATTGGAATC---------
----------------------------------TCTAAAAAGGC---TATATTTAGGATCAGAGGAAGTATTTTGCAAC
GCGCGA--------------------------------------------------------------------------
---------------------------------------------TGCTAGATGGTTTTCTGCAA---------------
----------CTTATGATATTGTTTGGTTTTCATCT-GGTTACGAATCTTAACCC----TGCGTTTGACTCCAGGTTCCC
TGAGAGTGCTCAACTCAGGTTCGTTTGCTGGTTGGAAATCCACGGCAAGATACACAGCAAGTTGCTATCCCGAGGCTCAG
CTTACGCCACTTACATGGTGTACAAGTTGGACGACGAGTCCTACGGGCTGGATTGGCCGGCCGAT---------------
---------GCATCAGTGAGCATTGGAGGCACCGACCTTGCCCGCAAGGTCTGCCTCCAACCTAACCCGCAAAGAAGCCA
TGCAGAGG------ATGTAGTGCTCCCTCGTGAAAGGGGTGATGGTTGGATGGAGCTGGAGCTAGGAGAGTTTGTCTGTG
AGGGGGATGAAGATGGCGACGTTTCCTTCGGCCTGGCGGAGACGAAACGTTTGAACGGTAAGGGCGGTCTCATCATGCAG
GGAATCGAGATAAGGCATAAGA----------------------------------------------------------
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>chr4A_131
-GATCGAACA----------------------------------------------------------------------
----------------------------------------------------------------------------CAGC
CAGGCCGCGGAGGCGGAGGAGGAGCCGATGGAGCCCGGCCAGTGCGAGATCGCGCGCCTGCCGGAGGAGATCCTGTCGGC
GGCGCTCTCCCGCACGTCGCCGCGCGACGCCTGCCGCGCCGCGGCGGTCTCCCCGGCGTTCCGCGCCGCCGCCGACTCCG
ACGCCGTGTGGGCCTGCTTCCTGCCGCCGCCCGCCGACCTCCCGCCGCTGGCCGACGGGGAGCTGCTGCT---GCCGCCG
CGCGGGAAGAAGGGCCTGTTCCTCCGCCTCTCCGGCAGCCCCGCCCTCCTCCCAGGCGGACTGGTATGTATTTTGTATAC
ACATACAACTAACCCCTGG---AACAAATTTGGTTGACCGCTAGCTAATCAACTCAA-GTGGCGCCATGGTGCAGAGCAT
GTGGCTGGACAGGGAGAGCGGCGCCAAGCAGGGACGGATGCAGGGGGGGACGAGGGGGGGCGAGACCCCCCCCAACGATC
GTGTCATCCCGTGCAGCGATCAGCTATATGCTAATCTTTTTCGCCTGCGCACTTGTCCGTACCTTGCTTCGCCCCCCCTA
TCCCTTGGGCCTTTGTTACTAATGCGAAGCATCAGCCCATCTGCTGATGTACAGCCCATTGGCTAAAGGCACAAATTGCA
CGAACTGGACAGCCTAATCCACGAACACCTTAGTTACAGAACGCAGCCACGATTAGGCACGCACATATCGCCGCATCCTT
TCCAAACCACCGCCGCCATCTACTCCTAGAAGGACGCCGCCACGGATCTCTCATCTCTCCATAGCGCGGCCATTGAGTAG
CGGAGAAGGAAGCGGACGCCGCCACGCCGGGACAGGCAGATGTTGATCCGCGGAGACGTTGCCGGTTGCCAGCAGATCGG
GCGCACGGATGCGCAGCAACAACACAAGGGGAGAAGGTAGTTGCTTTTCACATCAGATTAGTTCGTGCCTTTAAGAAGTA
TAGAAGTATAATCACACAGACTATAGTCATTAGAAGAATTAATTCAATTTTTTTTACAAACCAGTAGGTTCAAAAGCTCA
GCCATCAAAACCAGGGACAGATTCATGGGATCAAAGAGGCCAGTTAGTAGCAGCACACAGCCACGCACAGATCCATAATC
CTTCCGTTTCCAAGCAGCCTATTGCAATCAAGCGTCAGTAGGCAGATCAATGGGTACAAAACAACGAAAACAGGTATATT
AGTCCTGGTTGCTCCTTCCCAAACTAAACATCTTTTTCCTTGTACCACTCTTCTTAATTTGCTTCCACAGAATGAATTTG
CTTCCATCTCGCCAATTCCAATGAAAATAATGAGATAAGGTAATGTATTATTAACCCACGTTGCATCACTACAAATTATT
AGTTCATGAAATTATCTTGTGTTTCTTGTGTTGTGAGTTTATTTTGTCATTTATTAATTTCCTTGAAGTTTTGATCATGT
GAATGCAATGAATAGAGAAGAAAAGGCATGTTTGCACCATGACATCTCCATTAGACCAGACCCTAGGATTTTTTTTTACA
ACATAGCCGTTGCCCATGAGACTTAGTGCGCCCCCCCTGTGTCAAAATCCTGGCTCCGTCCCTGGCGCCAAGTGCTACAT
GGTGCCGGCGAGGGACCTGTCCATCGCGTGGCGCGACACGCCGCGCTACTGGACGTCCTGGATCCATCTCGCCGACTCAA
GGTTT---CTTGCCATCCTCCTTTGGTCT-----------TTCCTTGCAGCTAGC----TTCTGTTCCAATCGTTAATTT
TGATAGTGCTGTTGCATACCTTCTTGCGTTGTAGTCTTATAATTGCAAGTGGAAGTGCTAGGATGCAGGGTAGTA-----
-----------GCCACGAGGGCCAAAACCCAGAATATTCAGTAGCCATGAAAAAACTAGCAGTGAGTTCAGCAAAGTTTG
CAATTTTAATTTGCCCAGTTGAGTAC-CCCTCCATTTCTAAATATAAGACCTTGT----ATTTCAATATGGAA-------
-----GTATATAGACACATTTTAAAGTGTAGATTTACTCATTTTGCTTCGTGTATAGTTTGTATTAGAATC---------
----------------------------------TCTATAAAAAGGCTTATATTTAGGAATGGAGGGAGTATTTTGCAAC
GCGCGA--------------------------------------------------------------------------
---------------------------------------------TGCT-GATGGTTTTCTGCAA---------------
----------GTTATGATATTGTTTCGTTCTCGTCTTGGTTACGAATCTTAACCC----CGCGTTTGACTCCAGGTTCCC
TGAGAGTGCTCAACTCAGGTTCGTTTGCTGGTTGGAAATCCGCGGCAGGATACACAGCAAGATGCTGTCCCGAGGCTCAG
CTTACGCCAATTACATGGTGTACAAGTTGGACGACGAGTCCTACGGGCTGGATTGGCCGGCCGAT---------------
---------GCATCGGTGAGCATTGGAGGCACTGACCTTGCCCGCAAGGTCTGCCTCCAACCTAACCCGCAAAGAAGCCA
TGCAGAGG------ATGTGGTGCTCCCTCGTGAAAGGGGTGATGGTTGGATGGAGCTGGAGCTAGGAGAGTTTGTCTGCG
AGGGGGATGAAGATGGCGACGTTTCCTTCGGTCTGGCGGAGACGAAACGTTTGAACGGCAAGGGCGGTCTCATCATGCAG
GGAATCGAGATAAGGCATAAGA----------------------------------------------------------
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>chr7D_133
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-----------------------------------------------------------------------CCGACCAAG
GCGGCTGCAAAGGAGGAGGAGGAGCAGATGGAGGCA------TGCGAGATCGCCCGCCTGCTGGAGGAGCTCCTGTCGGC
AGCCTTATCCCGCACGTCGCCGCGCGACGCCTGCCGTGCCGCGGCTGTCTCCGCGGCCTTCGGGACGGCGGCCGACTCCG
ACGCCGTCTGGGCCTGCTTCCTGCCCAGCGGTCGTGACCTCCCGCTGCTCGCTGACGGAGAGCAGCTGCCAT--------
-GCAGGAAGAAGGACCTGTTCCTCCGCCTCTCCGGCAGCCCGGTCCTCCTCCCAGGCGGACTCCTGGTACGTACACACGT
TAGGCGGATCACCCAGCCCAACAACAAATTTTGTTTTTGG---GCTAATCAATTG-GTCGCATC--------CAGAGCAT
GTGGCTGGACAGAGAGACCGGCGCC-------------------------------------------------------
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---------------------------------------------------------------------GGGTGCTACAT
GGTGCCGGCGAGGGAGCTGTCCATCGGATGGGGCGC------------------------------TCTCGCCGACTCGA
GGTAC---CTTCCTTCCTTCCGTTACTCTGTCCTTTGAGTTCCGTCGCAGCTAGC----TTATTTTGGTCAATGAACAAT
GATGCTAGCTAGCTCGTCTAATTCCATACTAGTACATACTCTGAATATTTAATCGTGGCCCATGACTGAGTCTTGACTAC
ATTA----------------------------------------------------------------------------
-----------------------TACTTCCTCTGCTCCTAAATATAAGTCCTTTTAGAGATTTCAATAAAAAA-------
-----CTACATACATGTTTCTCAAAAAAAAAAACTACATACAAAGCAAAATGAGTGAATCTACACTCTAAAATACGTCTA
CGTACATCTGTATGTATGTAGTTCCTCATTGCAATCTTTAAAAAGACTTATATTTAGGAACGAAGAAAGTATATGTATAT
GAGGAATTAAACAATCATGAAAGAAAGTACTCCCTTCGAAAATAAATGTTGGGGTTTTAGATCTAACAGAGGGAGTAGCA
GTTAGTTCCCATCATCAGTTGGCTTTGCAACTTTTGTTCCCTTTGTGCTAGATGGGTTTTATC-----------------
---CAACTTAATTATGATATCTTTTGATCTTCATCTTCGTTAAGAATCCTAAATGTATATGTGTTCAACTCCAGGTCTTC
CGAGAGTGCTGAACTCATACTAGTTTGCTGGCTGTATATCCGCGGCAAGATAGATAGCAAGATGCTCTCCCAAGGCTCAA
TATACTCAGTGTACAGGGTGTACAAGTTTGCCAATTATTTGTATGGATTGTCCGACGGTTACTACGGGCTAGAATTGCCG
GTCCAGAAGGCATCAGTGAGCGTCGGAGACAACCACCAAATCCGCAAGGTCTGCATCCATCCTAACCAGCAAAGAAGCAT
GAGACGGAACTGTCATGCAACGCTTCCTCACAAAAGAGCTGATGGTTGGATGGAGCTGGAGCTGGGCGAGTTTGTTTGCG
AGGGGCATGAAGATGGGGACGTGTCGTTCGGTCTATCAGAGATGAAAGATTTGAGTAGGAAGAACGGTCTTATCGTGCAG
GGTATTGAGATTAGGCATAAGATTTGAGGAGGCATCCATGCCCGAATCCGAGCCAGTCCTGGTAGACAGGGA-GATAGAC
AACCTAGTGGCTGGCGATGACCTACATCGAGTGATG-GGTGTAGTTTTTGCGCTCATCACACCGTTGGTTAAATCAGAAA
---ATCCCATAATTATTTAGAAATTCACTCCGATATTGTCACTAATGAATAACGAATACGAGAGATCGTGAAGTCTTTGG
TTGAATATGTTTCTGCGGGACATAAACATGGAAAGAAAGCATCACTTATAAGGTAAAAATAAAAATGAAGGAAGAAAGGA
AGGAATTGGAGACACAACAAACCAACCAGAGTGCAAGACGACGTTCGGTACGAGCGAACGCTTGTACCGATCTCCAGAAG
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>chr5A_1736
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------------------------------------------------------------------------------AG
CACTAGTGCAGAACCGGGCAATAGCACCGGTTCGTAAGGCCCTTTAGTGCCGGTTCAGGAACCGGCACTAAAGTTTCGGC
ACTAAAGCCCCCCC-C---CCTTTAGTACTGGTTCAGCACGAACCGGTGCTAAAGGGGAACCACGTGGCACGAGCCAACT
CCGGGGGCCGGGAGCCCTTTAGTACCGGTTGGTA-------------CT-------AAATGGTTGTGGGTTTTTGTTTTA
TTTTGTATTTTTCAATTAAATTTGTGTTATCAATTTAATTTAGGATTGTTTTACGTTATAATGAGTTGTAGT--------
----------CA------TTATCATCATCATC---ATCATCGCATATTAATAAATAAATAAACTCTAGCTAGCTAAAAAT
CATCATAGTCATC--TAATTAC--------CACTATTTAATCATCATAGTCATTACCGC--TAGCTATCTAATCATCATC
AATGCTGGCTAGCTTAAAGAGGAAACATTCACTTTGTAACAGAAGCAAAGATATTATCAAGTTCAACATAATCATCACCA
ACATCGAAGTTCAGGACA---CGGACATGA-----GACAAGTAC--------TAATTAAGAGCATGAACTAGTAGCTACT
GA-TCCTGCTGCTCCCTCTCAGGTAGAATAGCATAGAACATGTATAGCTCTCCTGATTCATCATACTAGAGCATGCAGAT
GAATCTGTC
>chr4A_1737
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-------------------------------------------------------------------------------G
CACTAGTGCAAAACCGGGCAATAGCACCGGTTCGTAAGGCCCTTTAGCGCCGGTTTAGTAACCGGCACTAAAGTGTGGGC
ACTAAAGGT--CCC-C---CCTTTAGTACTGGTTCAGCACGAACCGGTGCTAAAGGGAAACCACGTGGCACGAGCCAGCT
TCGGGGGCCGGGAGCCCTTTAGTACCGGT----A-------------CT-------AAAGGTTTGTGGGTTTTTGTTTTA
TTTTTTATTTTTCAATTAAATTTGTGTTATCAATTTAATTTAGGATTGTTTTACGTTATAATGAGTTGTAGT--------
----------CG------TCATCATCATCATC---A------CATATTAATAAATAAATAAACTCTAGCTAGCTAAAAAT
CATTGTAGTCGTCATTAATTAC--------CACTATTTAATCATCATAGTCATTACTA------CTATCTAATCATTACC
AACACTGGCTAGCTTAAAGAAGAAACATTCACTTTGTAACAGAAGCAAATATATCATCGAGTTCAACATAATCATCACCA
ACATCGAAGTTCAGGACAATACGGACATGAGAGAGGACAAGTAC--------TAATTAAGAGCATGAACTAG-------C
TACTCCTGCTGCTCCCTCTCAGGTGGAATAGCATAGAACATGTATAGCTCTCCTGATTCATCATACTAGAGAATGCAGAT
GAATCTGTC
>chr3A_1738
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CACTAGTGCAGAACCGGGCGATAGCACCGGTTCGTAAGGCCCTTTAGTATCGGTTCCATAACCGGCAATAAAGTGTGGTC
ACTAAAGCCC--CC-C---CCTTTAGTACCGGTTCAGCACGAACCGGTGCTAAAGGGAAACCACGTGGCACGAGCCAGCT
CCAGGGGTCGGGAGCCCTTTAGTACCAGTTGGTAACACCAACCGGTACT-------AAATGTTTGTGGGTTTTTATTTTA
TTTTGTATTTTTCAATTAAATTTGTGTTATCAATTTAATTTAGGATTGTTTTACGTTATAATGAGTTGTAGT--------
----------CATCATCATCATCATCATCATC---A------CATATTAATAAATAAATAAACTCTAGCTAGCTAAAAAT
CATCGTAGTCGTC--TAATTAC--------CACTATTTAATCATCATAGTCATTACCGC--TAGCTATCTAATCATCACC
AACACTGGCTAGCTTAAAGAGGAAACATTCACTTTGTAACAGAAGCAAAGATATCATCGAGTTCAACATAATCATCACCA
ACATCGAAGTTCAGGACA---CGGACATGA-----GACA----CTAATTA--------AGAGCATGAACTAG--------
------TGCTGCTCCCTCTCAGGTAGAATAGCATAGAACATGTATAGCTCTCCTGATTCATCATACTGGAGCATGCAGAT
GAATCTGTC
>chr3A_1738
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CACTAGTGCAGAACCGGGCAATAGCACCGGCTCGTAAGGCCCTTTAGTGCCGGTTACATAACCGGCACTAAAGTGTGGTC
ACTAAAGCCC-CCC-C---CCTTTAGTACCGGTTCAGCACGAACCGGTGCTAAAGGGCAACCACGTAGCACGAGCCAGCT
CCGGGGGCCGGGAGCCCTTTAGTACCGGTTGGTA-------------CT-------AAAT--------GTTTTTGTTTTA
TTTTTTATTTTTCAATTAAATTTGTGTTATCAATTTAATTTAGGATTGTTTTACGTTATAATGAGTTGTAGTCG------
---TCATCATCATCATCATCATCATCATCATC---G------CATATTAATAAATAAATAAACTCTAGCTAGCTAAAAAT
CATCGTAGTCGTC--TAATTATATATACCACACTATTTAATCATCATAGTCATTACCGC--TAGCTATCTAATCATCACC
AACACTGGCTAGCTTAAAGAGGAAACATTCACTTTGTAACAGAAGCAAAGATATCATCGAGTTCAACATAATCATCACCA
ACATCGAAGTTCAGGACA---CGGACATGA-----GACAAGTACTAATTAATTAATTAAGAGCATGAACTAGTAGCTAGC
TACTCCTGCTGCTCCCTCTCAGGTAGAATAGCATAGAACATGTATAGCTCTCCTGATTCATCATACTGGAGCATGCAGAT
GAATCTGTC
>chr6A_1738
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CACTAGTGCAGAACCGGGTAATAGCACCGGTTCGTAAGGCCCTTTAGTGCCGGTTCCATAACCGGCACTAAAGTGTGGTC
ACTAAAGCCC-CCC-C---CCTTTAGTACCGGTTCAGCACGAACCGGTGCTAAAGGGAAACCACGTGGCACGAGCCAACT
TCGGGGGCCGGGAGCCCTTTAGTACCGGTTGGTAACACCAACCGGTACT-------AAATGTTTGTGGGTTTTTGTTTTA
TTTTGTATTTTTCAATTAAATTTGTGTTATCAATTTAATTTAGGATTGTTTTACGTTATAATGAGTTGTAGTCG------
---T------CATCATCATCATCATCATCATC---G------CATATTAATAAATAAATAAACTCTAGCTAGCTAAAAAT
CATCGTAGTCGTC--TAATTAC--------CACTATTTAATCATCATAGTCATTACCGC--TAGCTATCTAATCATCACC
AACACTGGCTAGCTTAAAGAGGAAACATTCACTTTGTAACAGAAGCAAAGATATCATCGAGTTCAACATAATCATCACCA
ACATCGAAGTTCAGGACA---CGGACCTGA-----GACA----CTAATTA--------AGAGCATGAACTAG--------
------TGCTGCTCCCTCTCAGGTAGAATAGCATAGAACATGTATAGCTCTCCTGATTCATCATACTGGAGCATGCAGAT
GAATCTGTC
>chr6A_1738
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CACTAGTGCAGAACCGGGTAATAGCACAGGTTCGTAAGGCCCTTTAGTGCCGGTTCCATAACCGACACTAAAGTGTGGGC
ACTAAAGGCC--CC-CCC---TTTAGTACCGGTTCAGCACGAACTGGTGCTAAAGGGAAACCACGTGGCACTAGCCAGCT
CCGGGGGCCGGGAGCCCTTTAGTACCGGTTGGTAACACCAACCGGTACT-------AAATGTTTGTGGGTTTTTGTTTTA
TTTTGTATTTTTCAATTAAATTTGTGTTATCAATTTAATTTAGGATTGTTTTACGTTATAATGAGTTGTAGTCG------
---T------CATCATCATCATCATCATCATC---G------CATATTAATAAATAAATAAACTCTAGCTAGCTAAAAAT
CATCGTAGTCGTC--TAATTAC--------CACTATTTAATCATCATAGTCATTACCGC--TAGCTATCTAATCATCACC
AACACTGGCTAGCTTAAAGAGGAAACATTCACTTTGTAATAGAAGCAAAGATATCATCGAGTTCAACATAATCATCACCA
ACATCGAAGTTCAGGACA---CGGACATGA-----GACA----CTAATTA--------AGAGCATGAACTAG--------
------TGCTGCTCCCTCTCAGGTAGAATAGCATAGAACATGTATAGCTCTCCTGATTCATCATACTGGAGCATGCAGAT
GAATCTGTC
>chr6A_1738
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CACTAGTGCAGAACCGGGCAATAGCACCGGTTTGTAAGGCCCTTTAGTGCCGGTTCGGGAACCGACACTAAAGTTTCGGC
ACTAAAGGCC--CC-CCCCCCTTTAGTACCGGTTCAGCATGAACCGGTGCTAAAGGGGAACCACGTGGCACGAGCCAGCT
CCGGGGGCCGGGAGCCCTTTA----------------------GGTACT-------AAATGGTTGTGGGTTTTTGTTTTA
TTTTGTATTTTTCAATTAAATTTGTGTTATCAATTTAATTTAGGATTATTTTACGTTATAATGAGTTGTAGTCG------
---T------CATCATCATCATC------ATC---G------CATATTAATAAATAAATAAACTCTAGCTAGCTAAAAAT
CATCGTAGTCGTC--TAATTAC--------CACTATTTAATCATCATAGTCATTACCGC--TAGCTATGTAATCATCATC
AACGCTGGGTAGCTTAAAGAGAAAACATTCACTTTGTAACAGAAGCAAAGATATCATCAAGTTCAACATAATCATCACCA
ACATCGAAGTTCAGGACA---CGGATATGA-----GACAAGTACTAATTA--------AGAGCATGAACTAGTAGCTACT
GA-TCCTGCTGCTCCCTCTCAGGTAGAATAGCATAGAACATGTATAGCTCTCCTGATTCATCATACTGGAGCATGCAGAT
GAATCTGTC
>chr5A_1738
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CACTAGTGCAGAACCGGGCAATAGCACCGGTTCGTAAGGCCCTTTAGTGCCGGTTCCATAACCGGCACTAAAGTGTGTGC
ACTAAAGGCC--CC-CCC---TTTAGTACCGGTTCAGCACGAACCGGTGCTAAAGGGAAACCACGTGGCATGAGCCAGCT
TCGGGGGCCGGGAGCCCTTTAGTACTAGTTGGTAACACCAACCGGTACT-------AAATGTTTGTGGGTTTTTGTTTTA
TTTTGTATTTTTCAATTAAATTTGTGTTATCAATTTAATTTAGGATTGTTTTACGTTATAATAAGTTGTAGTCGTCG---
---T------CATCATCATCATC------ATC---G------CATATTAATAAATAAATAAACTCTAGCTAGCTAAAAAT
CATCGTAGTCGTC--TAATTAC--------CACTATTTAATCATCATAGTCATTACCGC--TAGCTATCTAATCATGACC
AACACTGGCTAGTTTAAAGAGGAAACATTCACTTTGTAACAGAAGCAAAGATATCATCGAGTTCAACATAATCATCACCA
ACATCGAAGTTCAGGACA---CGGACATGA-----GACA----CTAATTA--------AGAGCATGAACTAG--------
------TGCTACTCCCTCTCAGGTAGAATAGCATAGAACATGTATAGCTCTCCTGATTCATCATACTGGAGCATGCTGAT
GAATCTGTC
>chr1A_1738
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CACTAGTGCAGAACCAGGCAATAGCACCGGTTCGTAAGGCCCTTTAGTGCCGGTTTAGGAACCGGCACTAAAGTTTCGGC
ACTAAAGGCC--CC-C---CCTTTAGTACCGGTTCAGCACGAACCGGTGCTAAAGGGGATCCACGTGGCACGAGCCAGCT
CCGGGGGCCGGGTGCCCTTTAGTACCGGTTGG------------------------------TTGTGGGTTTTTGTTTTA
TTTTGTATTTGTCAATTAAATTTGTGTTATCAATTTAATTTAGGATTGTTTTACGTTATAATGAGTTCTGGTCGTCGTCA
TCAT------CATCATCATCATC------ATC---G------CATATTAATAAATAAATAAACTCTAGCTAGCTAAAAAT
CATCATAGTCGTC--TAATTAC--------CACTATTTAATCATCATAGTCATTACCGC--TAGCTATCTAATCATCATC
AACGCTGGCTAGCTTAAAGAGGAAACATTCACTTTGTAACAGAAGCAAAGATATCATCAAGTTCAACATAATCATCACCA
ACATCGAAGTTCAGGACA---CGGACACGA-----GACAAGTACTAATTA--------AGAGCATGCACTAGTAGCTACT
GA-TCCTGCTGCTCCCTCTCAGGTAGAATAGCATAGAACATGTATAGCTCTCCTGATTCATCATACTGGAGCATGCAGAT
GAATCTGTC
>chr4A_1738
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CACTAGTAGAAAACGGGCCATTAGCACCGGTTTGTAAGGGTCTTTAGTGCCGGTTATGGAACCGGCACTAACGTTTCGGC
ACTAAAGCCC--CC-CCCCCCTTTAGTACCGATTCAGCACGAACCGGTGTTAAAGGGGAACCACGTGGCACGAGCCAGCT
CCGGGGGCCGGGAGCCCTTTA----------------------GTACCGGTTGGTAAAATGGTTGTGGGTTTTTGTTTTA
TTTTATATTTTTCAATTAAATTTGTGTTATCAATTTAATTTAGGATTGTTTTACGTTATAATGAGTTGTAGTCG------
---T------CATCATCATCATC------ATCATCG------CATATTAATAAATAAATAAACTCTAGCTAGCTAAAAAT
CATCGTAGTCGTC--TAATTAC--------CACTATTTAATCATCATAGTCATTACCGCGCTAGCTATCTAATCATCATC
AACGCTGACTAGCTTAAAGAAGAAACATTCACTTTGTAACAGAAGCAAAGATATCATCAAGTTCAACATAATCGTCACCA
AGATCGAAGTTCAGGACA---CGGACATGA-----GACAAGTACTAATTA--------AGAGCATGAACTAGTAGCTACT
GA-TCCTGCTGCTCCCTCTCAGGTAGAATAGCATAGAACATGTATAGCTCTCCTGATTCATCATACTGGAGCATGCAGAT
GAATCTGTC
>SNPs
-----SSSS-SSS--S--S---------S---------S---------------S---------SS----------S--S
-SS---S---S-S--------SSSSS-SS--------------------------S-----S------------------
-------------------S------------------------S---S------------SS---------S---S---
------S---S-------S--S-----------------------------------------S-S------------S-
----SS----------------------------------S---------------------SS-SS-------------
------------------------------------------------------S------------------------S
---S-------------S------S--------------------------SSSSS------------------------
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------------------------------S---S---------------------------------------------
-----SSS--------S--------S-----S---S--------------------------------------------
---------SSS-SS---SSSS---------------------------S----S-------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------S----------------SSSSS-S--------------------------------------------
-------------------S-------------------S--------SSSS-SS--SS-SSSSSSSSSSSSSSSSSSSS
SSS---------------------------------------S-------------------S-----------------
--------------------------S-----S-----------------------------------------------
-------S------------------------------------------S----------------S-S----------
--------------------------------------------------------------------------------
-----------S---------------------------------------S---------------------S------
-------S---S-------S--------------------------S---------------------------------
--------------------------------------SS--SSSSS------------S-S---------S--------
------S-------S--S-----S-------------S------------------------S-S---S-----------
SSS------SS-------------------S---S-------------S-------------------------S-----
----------------S------------------------------------S----------------S---S--S--
--------------S-----------------------SS--S-----------S---S-----------S---S-----
-------------------------------------S------------------------------------------
--------------S-----------------------------------------------------------------
-----------------------------------SSSSSSSS--------------------------S----------
--------------------------------------------------------------------------------
--------------------S--------------------S--------------------S-----------------
S-------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
-----S--------------------------------------------------------------------------
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---------
>forward_109
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---------AATTCTTCGTCGTCTCCCCC---------------------------------------------------
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>reverse_2708
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-------------------------------------------------------------------CCAAGAATTGCCG
GTCCAGA-------------------------------------------------------------------------
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>forward_1848
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--------------------------------------------------------------------TCGCCGACTCGA
GGTACTAC------------------------------------------------------------------------
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>reverse_3398
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-------------------------------------AGCCCTTTAGTGCCGGTTC------------------------
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---------
