>input_sequence_82518
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---------------ATGTTGAAGCCGGCGGCATCATCTTCCTCGTCGGTCCTGTGCTGGGCTGTCATCGCCGCTGCACT
GATCATGTGTGCGGCCAACGTTGAGCTTGTCCATGGAGGTAA-TTAACCCCGCAAAAAAATTAACCACCAGATGATCTCC
ATA--TCTTCACTGAACTCTGTTGTGATCGATCGATGTGCCAACCGATATTCCTATT------------TGTGTGCAGGT
GGAAGGCCAGTGCCGAGACCTCCGGCTCCGGTAGGGCATGTGGCTCCCAAGGAGCACTGCCCTGACTGCAGCGACAACCC
ACCACCGT---CGCCCCCGCTTCCTCCTACTCCTCCGGCAGCCACAGCGGACGTACCTCCTGCTGCCAGCCATATGTAA-
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>chr3D_1_TraesCS3D01G000700
GGTTGGGGCGTCATCTTCTGGCGCCGCTTGCGAGGAAGATGTGCACACGTTTTTATTAAAAAAAGATAGATGAAGCCCTC
GCCTCCATCTAGAAAAATATTAAAAAAATCCTCACCTTCATCTAGAAAAAGAAGTGAAAAAGAAAAGAAAAAAATTATCA
ATGCAACCTACCAGCGAGCGTCACTTTGCGTAGCCCTTCATGTAAAAAAATATGTAGGTTCATCACCTTCATCTAAAAAG
AAAAAAATATTTTAAAAAAATTCCTCAACTGCATCTAAAAATAATATCCCAAAAGCTTTTTCACCATGGCCAATCAGTTC
GCGCCACATGGCATATCTGGTTGGCTGCCTTTCACGTGACCCTTAGTGGGTTTAATAGTCTCTTCATCTTTCCTGGCTGT
TTTCAATGGTGGCAAGCTTGGGGTGTTCAAAGCTTCCGTTCCGTTATCAGCCACGGAGATCAAATCTCTTCATGCTTGTT
TTCGTTGGTAGGAGAGGGATTTTCGTGCATGCTAGCCTTGCCGGCTCAGCTGGTGAACCACTCGCTCTTTGTTAACGGCA
GCCTGTTGTTTTTTCAAAAGCCAGCGGTGATACAACGAATTTGGATTCCCACTCTCTTATTGCCGGGATTACTACTTGTT
GTTGCTGGATTGTAATATGC-GCAATTGTACCACGAGAGAG---------TGATCATTCCAAAGCTATGCTGCAGCTGGT
AACAT---GTACCTACTTCCTCCGTCTCACAATATAAGATCATTTTTTAAGTTATATTATGTGTTAGCTGTCACGCGGTT
T-CTTAATAAGTCTTACA--GATGTGGAAAAGTCCATCTCGTTGACGGCGTGCAGTCGCCGTTGGCGAGCTCCATGCCGG
AGCATGCGTTCATACATACATAAGTGGTTATACA-CACTGGTTGCTG------------------------------GAA
ATTAAACTATACGTCTATATATACATACATATACAAGCATGCATCCACATGCAGTCGTTCCCAGAACGATCCAA------
--GTTAACACCAAAGATGTTGAAGCCGGCGGCATCATCTTCCTCGTCGGTCCTGTGCTGGGCTGTCATCGCCGCTGCACT
GATCATGTGTGCGGCCAACGTTGAGCTTGTCCATGGAGGTAA-TTAACCCCGCAAAAAAATTAACCACCAGATGATCTCC
ATA--TCTTCACTGAACTCTGTTGTGATCGATCGATGTGCCAACCGATATTCCTATT------------TGTGTGCAGGT
GGAAGGCCAGTGCCGAGACCTCCGGCTCCGGTAGGGCATGTGGCTCCCAAGGAGCACTGCCCTGACTGCAGCGACAACCC
ACCACCGT---CGCCCCCGCTTCCTCCTACTCCTCCGGCAGCCACAGCGGACGTACCTCCTGCTGCCAGCCATATGTAAT
GTATGCTTGCCGTGCTTCCGCGTTGCACAGCAGGCCGCTGTAGACATTTCAAGGTTTACTTCAGTCCGTTTGACTTATCC
C---------AGTGGTACTAGTTCTTTTTCTTTTTGAGGCGACACTGGTACTAGTTGTATCGCATGGATATGTTTGTTTG
TTCGGTTTTGCTATGTCTCAATCGAC-GATTCTATTGAGTGTAAATTAGTCCAGGAAGAACACAAATTAGTCGTCGTCTA
TAAAGCTATGCTGAATGTGTAGATTGGTCACGTACCTATTAAACCCTGCAAATTGCCAAATTGTGCGCCCGCCACCAT-T
CTATCATGGTTGCTGTTAACTGGGCGCATATACTGGTCAATCATTAAGACAACATGTGAGCGTGAGGCTATATTTTTCTA
ACACAATACAGACGTAAAAAGTAAGGGTCATACATA--------------------TATGAACACACGCACACACACTCT
ATCCCTATGAGCAACTCATGCTTCTAGGTTGTTGTGAAAACCATTTTGCAACTATCCTCCTTCCATTAAATTGTCTTTAT
CGA-----------------------------------------------------------------------------
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-----------------------------------GCTTCTTTCTGAGTAATGGAGCCGGGGAGCTACTCCCTGTTGATC
TAAAAAAATTAAACTGTCTTTCCTCATGTCTCAGATACCTGTTGTCGTCGGCCATGGACTGAGGAAGAACCCTAAGATGA
CGCGCCGGCTGTCCGACTTGGCCGAGGCAGAAAAATAACAGAGTGGTAATGATGGCGAACTGAAGG--TTTGGATG----
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--------------------------------------------------------GAGGTCGGCAAGTTGTTCTCGTCG
TGGCCAAGATGCCACTAATTTACATGACTACTTTGCCACTA-TTCGTTGCCGTCAAGCTGGACTTCCCAATGTGCGCATT
GTTGACCCATGGCCAGGGGAGACTTTGACTGTTAATCAACTAGAGAATACTTGCATCTACACAATCAAAGTCTCCAAGAC
CAGCAAGAGAGCCTAACAACCCTCGGGATAGTCCAGTACTACTAGTACTGTTCCCAAACCATATAACAATGCATGTACGT
AGTGA
>chr3A_1
GGTTGGGGTGTCATCTTCTGGCGCCGCTTGCGAGGAAGTTGTGCACACGTTTTCATTTTTAAAAAATAGACAAAGCCCCC
GCCTCCGTCTAGAAAAACATTAAAAAAATCCTCACCTCCATCTAGAAAAAGAAGTGA----------AAAAAAATTATCA
ATGCAACCTACCAGCAAGCCTCACATTGCGTAGCCCTCCATGTAAAAAATTA----------------------------
----------TTTTAAAAAATTCCTCAACTCCATCTAAAAATAATATTCCAAAAGCTTTTTCATCATGGCCAACCAGTTC
GCGCCACATGGCATATCTGGTTGGCTGCCTTTCACACGACCCTTAGTGGGTTTAATAGTCTCTTCATCTTTCTTGGCTGT
TTTCAGTGGTGGCAAGCTTGGGGTGTTCAAACCTTCCGTTCCGTTATCAGCCACGGAGATCAAATCTCTTCATACTTGTT
TTCGTTGGTAGGAGAGGGATTTTCGTGCATGCTAGCCTTGCCGGCTCAGCTGGTGAACCACTTGCTCTTTGTTGACGGTA
GCCTGTTGTTTTTTT--AAGCCAGCGGTGATACAACGAATTTGGATTCCCACTCTCTTATTGCTGGGATTACTACTTGTT
GTTGCTGGATTGTAATATGC-GCAATTGTACCACGAAAGAG---------TGATCATTCCAAAGCTATGCTGCAGCTGGT
ACGTACACGTACCTACTTCCTCGGTCTCACAATATAAGATCATTTTTCAAGCTATATTATGTGTTAGCTGTCACGCGGTT
TTCTTAAACAGTCTT--ACAGATGTGGAAATGTCCATCTCGTTGACGGCGTGCAGTCGTCGTTGGCGAGCTCCATGCCGA
AGCATGCGTTCATACATACATAAGTGGTTATACAACACTGGTTGCTG------------------------------GAA
ATTAAACTATACGTCTATATATACATACATATGCAAGCATGCATCCACATGCAGTCGTTCCCAGAACGATCCAA------
--GTTAACACCAAAGATGTTGAAGCCGGCGGCATCATCTTCCTCGTGGGTCCTGTGCCGGGCTCTCATCGCCGCTGCACT
GATCATGTGTGCGGCCAACGTTGAGCTTGTCCATGCAGGTAA-TTCG-------------------------------CC
ATA--TCTTCACTGAACTCTGTTGTGATCGATCGATGTGCCAACCGATATCCCTATT------------TGTGTGCAGGT
GGCAGGCCAGTGCCGAGACCTCCGGCTCCGGTAGGGCATGTGGCTCCCAAGGAGCACTGCCCTGACTGCAGCGACAACCC
GCCACCGT---CGCCCCCGCTTCCTCCTACTCCTCCGGCAGCCTCAGCAGACGTACCTCCTGCTGGCAGCCATATGTAAT
GTACGCTTGGCGCGCTTCCGCGTTGCACAGCAGGCCGCTGTAGACATTTCAAGGTTTACTTCAGTCCGTTTGACTTATCC
C---------AGTGGTACTAGTTCTTTTTCTTTCTGAGGCGACACTGGTACTAGTTGTATCGCATGGATATGTTTGTTTG
TTCGGTTTTGCTACGTCTCAATCGAC-GATTCTATTGAGTGTAAATTAGTTCAGAAAGAACACAAATTAGTCGTCGTCTA
TAAAGCTATGCTGAATGTGTAGATTGGTCACGTACCTATTAAACCCTGCAAATTGCCAAATTGTGCGCCGGCCACCAT-T
CTATCATGGTTGCTGTTAACTGAGCGCATATACTGGTCAATCATTAAGACAACATGTGAGCGTGAGGCTACAT-TTTTTA
ACACAATATAGACGTAAAGGGTAAGGGTCATACATACGAAC--ATACACCTATCTCTATGAACACACGCGCACACA--CT
ATCCCTATGAGCAATTCATGCTTATAGGTTGTTGTGAAAACCATTTTGCAACTATCCTCCTTCCATTAAATTGTCTTT--
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>chr3B_612
CTCTCA--------------------------------------------------------------------------
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---------------------------------------------------------TATTGCCGGGATTACTACTTGTT
GTTGCTGGACTGTAATATGCAGCAATTTTTCCACGAGTGATTATGCAGCCTGATCATTCCAAAGCTATGCTACAGCTGGT
ACCTAC------------------------------------------------------GTATTAGCTGTCATGCGATT
TTCTGAAACACTCTT--A--GATGTGGAAACGCCCATCTCGTTGATGGCGTGCAGTCGTCGTTGCTATGCTCCATGCCGG
AGCATGCGTTCATACATACATAAGTGGT--TACA-CACTAGTTGCTA-------------------------CAGTAGAA
ATTAAACAATACGCCTATAT----ATACATATACAAGGATGCATCCACATACAGTCGTTTCCAGAACGATCCAA------
--GTTAACACCAAAGATGTTGAAACCCGTGGCATCGTCTTCCTCATCGGCCCGGTTCTGGGCGGTCATCGCCGCTGTACT
GATCTTGTGTGCCGCCAACGTTGAGCTTGTCCATGGAGGTAA-TTAACTATG-----------------AGATGATCTCC
--A--TCTTCACTGAACTCTGTTGTGATCGATCGATGTGCCAACCGATATTAC--------TATGCATGTGTATGCAGGT
GGAAGGCCCGTGCCGAGACCTCCGGCTCCGGTAGGGCATGTGGCT-----------------------------------
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>chrUn_612
CTCTCA--------------------------------------------------------------------------
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---------------------------------------------------------TATTGCCGGGATTACTACTTGTT
GTTGCTGGACTGTAATATGCAGCAATTTTTCCACGAGTGATTATGCAGCCTGATCATTCCAAAGCTATGCTACAGCTGGT
ACCTAC------------------------------------------------------GTATTAGCTGTCATGCGATT
TTCTGAAACACTCTT--A--GATGTGGAAACGCCCATCTCGTTGATGGCGTGCAGTCGTCGTTGCTATGCTCCATGCCGG
AGCATGCGTTCATACATACATAAGTGGT--TACA-CACTAGTTGCTA-------------------------CAGTAGAA
ATTAAACAATACGCCTATAT----ATACATATACAAGGATGCATCCACATACAGTCGTTTCCAGAACGATCCAA------
--GTTAACACCAAAGATGTTGAAACCCGTGGCATCGTCTTCCTCATCGGCCCGGTTCTGGGCGGTCATCGCCGCTGTACT
GATCTTGTGTGCCGCCAACGTTGAGCTTGTCCATGGAGGTAA-TTAACTATG-----------------AGATGATCTCC
--A--TCTTCACTGAACTCTGTTGTGATCGATCGATGTGCCAACCGATATTAC--------TATGCATGTGTATGCAGGT
GGAAGGCCCGTGCCGAGACCTCCGGCTCCGGTAGGGCATGTGGCT-----------------------------------
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>chrUn_612
CTCTCA--------------------------------------------------------------------------
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---------------------------------------------------------TATTGCCGGGATTACTACTTGTT
GTTGCTGGACTGTAATATGCAGCAATTTTTCCACGAGTGATTATGCAGCCTGATCATTCCAAAGCTATGCTACAGCTGGT
ACCTAC------------------------------------------------------GTATTAGCTGTCATGCGATT
TTCTGAAACACTCTT--A--GATGTGGAAACGCCCATCTCGTTGATGGCGTGCAGTCGTCGTTGCTATGCTCCATGCCGG
AGCATGCGTTCATACATACATAAGTGGT--TACA-CACTAGTTGCTA-------------------------CAGTAGAA
ATTAAACAATACGCCTATAT----ATACATATACAAGGATGCATCCACATACAGTCGTTTCCAGAACGATCCAA------
--GTTAACACCAAAGATGTTGAAACCCGTGGCATCGTCTTCCTCATCGGCCCGGTTCTGGGCGGTCATCGCCGCTGTACT
GATCTTGTGTGCCGCCAACGTTGAGCTTGTCCATGGAGGTAA-TTAACTATG-----------------AGATGATCTCC
--A--TCTTCACTGAACTCTGTTGTGATCGATCGATGTGCCAACCGATATTAC--------TATGCATGTGTATGCAGGT
GGAAGGCCCGTGCCGAGACCTCCGGCTCCGGTAGGGCATGTGGCT-----------------------------------
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>chr3B_768
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------------------------------------------------------------GTGTTAGCTGTCACGCGGTT
TTGTTAAACAGTCTTACA--GACGTGGAAACGCCCATCTCGTTGACGGCGTGCAGTAGTCGTTGCTGTGCTCCATGCCGG
AGCATGCGTTCACACATACATAAGTGGT--TACA-CACTGGTTGCTA-------------------------C-------
------------GCCTATAT----ATACATATACAAGCATGCATCCACATGCAGTCGTTCCCAGTTAA------------
---TTAACACCAAAAATGTTGAAGCCCGTGGCATCGTCTTCCTCGTCGGCCCGGTTCTGGGCCGTCATCGCCGCTGCACT
GATCTTGTGTGCGGCCAACGTTGAGCTTGTCCATGGAGGTAA-TTAACCATG-----------------AGCTGATCTCC
--ATATCTTCACTAAACTCTTTTGTGATCAATCGAGGTGCCAACTGATATTCCTATGTATG------TGTGTGTGCAGGT
GGAAGGCCTGTGCCTAGACCTCCAGCTCCGGTAGGGCATGTGGCTCCCAAGGAGCACTGCCCTGACTGCAGCGACAACCT
GCCACCGTCGCCGCCGCCGCTTCCTCCTACTCCTCCGGCAGCTGCAGCAGGCGTACCTCCTGCTAGCGGCCATGTGTGAT
GTAGGCTTTGCGCGCTCCTCCGGA-----------CGCTGCAGAAATTTCAATGTTTACTACAGTCCGTTTGACGACTTG
CCTCAACGGTAGTACTACTAGTTATGGTTTTCTTTGAGGCGACACTGGTACTAGTTGTATTGCATGGATATGTTTGTTTA
TTCAGTTTTGCTATTTCTCAATCGACAGATTTCATCGAGTGTAAATTAGTTCAGAGAGAACACAAATTAGTCGTGGTCTA
TAGAGCTATGCA-------TACACTGGTCACACAATTATTAAACCGTGCAAATTGCCAAATTGTGCGCCAGCCACCAA-T
CTACCATGGTTGCTGTTAACTGGGCCCATATATTGGTCAATTATTAAGTCAGCATGTGAGCGTGAGTCTACTC-TTTTTA
ACACAATACATATGTAAACGC------TCATACATACGCATATATACACTCATCTTTATAAACACACGCACGCACTGTCT
ATCCCTATAGGCAACTCTGTATCCTGGGTTGTTGTGAAAACCATCTTGTAACTATCCTCCTTCCATTAAACTGCCTTTAT
TGGGCTGCCTGAACCAGAATCCCATCCCTCCCGCGGCGCTCCCGCGAGCGCCTGGGGGAACCCTAGCCTCCCTCCTCCAC
ACTCCTCACGCGGCCTCCCCCCTCGCCGCCGCCCAGCAGGGCCACCGGCGAAGCCTGGCCGGCTAGGGCGACGGCGGGGC
CTCCTTCTTGCCTCCCCACGGGGTCCACGGCCGGCGCGGGGCGGCCGCTCGTCGGGGGTCGCTGACCTACGGCGGGGGCA
CCGGCGCGGCGGCGCAGCTCCAGGGTGGCGGTGTGGTTGCCTGGTGGCGGTGCAACGACGACTGGGCGTGCGTATGCGGC
ACGGCCGGATCAGGTGGTGGCAAGGCCGGCGCGCCTCCGACCAGATCCCCCCCCCCCCGGATTTGGTCTCAGGTGGCGGC
GGGCGTCGCGCGGTGATGGCGGAGACCCATCCGGGACTCGGCGGGGGGGGGGGGGGGGGCTTGCAGCGGCGTGGCTGCAA
CCTCGTGGTGGCCTGGTCTTCCGCGGCGACGGCGGGACTTGCTCCGGCGGCGGTTGGACTGCGATTGACTTGGGTGAGCT
CCCTCCCTCCTCTTCGGTTTCTTCTTCGGGCTCGTCAAGCCAGGATTGCTCCATGGTGCGGTGTGGGTGCGCGCAAGGCC
TGCCGGAGGTGGCAGGGGACTTTGGGAAGGGGGCAGGGTGCCCCTCCTGTGGCATTTGGTGGCTGCTTTGGGTGGCTGCC
GGAGTTCCCTTGGCCCAGATCTAGCCGCCGAGGACACCAACCCTGCCAAGGTGTCGGCTTTGGGGTGGAAGGGTGGTCTT
CTGCTCCGTTCCGGTCGGCCGCATCCGTTAGGTGTATCCTGGATGGGGGTGGGGCTCGGATGTAGTGGCGGCGGCCCGGT
TGGTGGTAGTCGTGGTTCCCATGGGCGGAGCATGCGACTCGGGCATTGTCCGGTCACCATGGCCGTGTGGGTGGCATGTT
GACCGGGGTGTGTTGTTCGGTGGTGGCGTTACGATGGCCCATAACCCAATTCGATTACGATGAGTATTGGCCTTGGTGAA
AACCCGCTCTGTCTTATAAGGCCGGCGGCGGAGGCGTTCTGGCGTCGTCCCCTTCTTGAAGGCGTAGTCGCCGCATCTCA
TCTGTTGTCGGTGCTCCAGGGGAAACCCTAATCCTTGGATTGGGCGGTGGCGACACTACGGTGTCGTTCCCTTGCTGAAG
GCGCCACCTTGGAGCCCATTGAGCGTCACACACGGCTTCTCCTCTTCGCGGTGGCTCTCCCACGGTTGAGGATCCTGACG
ACTCCGTAGTAGTGCTTAGTGTTCCATCTGGTGTTTACTAGGTGTTTGTTGGGGTGGTGTTTCCGTTTTCAGCATCCTTG
TATCCAGCCTTGGGTGTGTGTGCGTGTGTGTGTGTTTGTATCGGCCGGTTTCAACTTGTTTGGTGATGGTGCTTTATATA
TAAAGCAGGGGAAACCCTTTTTCGGAAATTATTGGGCTTCTTTCTGAGTAATGGAGCCAGGGAGCTACTCCGTGTTGATC
TAAAAAAA----ACTGTCTTTCCTCATTACTCAAATACCTGTCGTCGTCGAGCATGGATTAAGGAAGAACCCTAAGATGA
CGTGCCGGCTGTCCGACTTGGCCGAGGCAGAAAAGTAACAGAGTGGTAATGGTGGCGAACTGAAGGGGTTTGGCTG----
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--------------------------------------------------------GAGGGTGTCAAGTTGTTCTCGTCG
TGGCCAAGATGCCACTAATTTACATGACTACTTTTCCACTAATTCGTTGCCGTCAAGGTGGACTTCCCAATGTGGGAATT
GTCGACCCA-----------------------------------------------------------------------
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>chr3B_795
AAGTCTG-------------------------------------------------------------------------
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----------------CA--GATGTGGAAACGCCCATCTCGTTGACGGCGTGCAGTCGTCGTTGCCGTGCTCCATGCCGG
AGCATGCGTTCATACATGCATAAGTGGT--TACA-CACTAGGTTGCTAGAAATTAAGCAGACGAAAACTATTC-------
------------GTCTATAT----ATACGTATACAAGCATGCATCTATTACATGAAGATGTCGAAGATAGATAGATAGAG
AGGTTAACACCAAAGATGTTGAAGCCCGTGGCATCGTCTTCCTCGTCGGTCCGGTGCTGGGCGGTCATCGCCGCTGCACT
GATCCTGTGTGCGGCCAACGTTGAGCTTGTCCATGGAGGTAAATTAAGCATG-----------------AGATGATCTCC
--ATATCTTCACTAAACTCTGTTATGATCGATCGATGTGCCAACCGATATTCATATTCCTGTATGTATGTGTGTGCAGGT
GGGAGGCCTGTGCCGAGACCTCCGGCTCCGGTAGGGCATGTGGCTCCCAAGGAGCACTGCCCTGACTGCAGCGACAACCC
GCCACCGT---CGCCGCCGCTTCCTCCTACTCCTCCGGCGGCTGCAGCAGAAGCACCTCCTGCTAGCAGCCATGTGTGAT
GTAGGCTGTGTGCGCTCCCTCGTTGGGCAGCAGGCCACTGCAGACATTTCGACGTTTACTACAGTCTGTTTGACTTGCTA
C---------AGTGGTACTAGTTCTTTTTCTCTTTGAGCCGACACTGG--------------------TATGTGTGTTTG
TTTGGTTTTGCTATGTCTCAATCGAC-GGTTCAATTGAGTGTAAATTAGTTCAGAAAGAACACAAATAAGTCGCGGTCTA
TAAAGCTACGCTGGATGTGTACACTGGCCACACAATTATTAAACCGTGCAAATTACCAAATTGTGCGCCCGCCACCAAAT
CTATCATGGTTGCTGTTAA-------------------------------------------------------------
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>chrUn_1292
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-CCACCGTCGCCGCCGCCGCTTCCTCCTACTCCTCCGGCAGCTGCAGCAGGCGTACCTCCTGCTAGCGGCCATGTGTGAT
GTAGGCTTTGCGCGCTCCTCCGGA-----------CGCTGCAGAAATTTCAATGTTTACTACAGTCCGTTTGACGACTTG
CCTCAACGGTAGTACTACTAGTTATGGTTTTCTTTGAGGCGACACTGGTACTAGTTGTATTGCATGGATATGTTTGTTTA
TTCAGTTTTGCTATTTCTCAATCGACAGATTTCATCGAGTGTAAATTAGTTCAGAGAGAACACAAATTAGTCGTGGTCTA
TAGAGCTATGCA-------TACACTGGTCACACAATTATTAAACCGTGCAAATTGCCAAATTGTGCGCCAGCCACCAA-T
CTACCATGGTTGCTGTTAACTGGGCCCATATATTGGTCAATTATTAAGTCAGCATGTGAGCGTGAGTCTACTC-TTTTTA
ACACAATACATATGTAAACGC------TCATACATACGCATATATACACTCATCTTTATAAACACACGCACGCACTGTCT
ATCCCTATAGGCAACTCTGTATCCTGGGTTGTTGTGAAAACCATCTTGTAACTATCCTCCTTCCATTAAACTGCCTTTAT
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>chr3A_1880
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---------------------------------------------------------------CATTAAATTGTCT----
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----------------------------TTATCGGGCTTCTTTCTGAGTAATGGAGCCGGGGAGCTACTCCCTGTTGATC
TAAAAAAATTAAACTGTCTTTCCTCATATCTCAAATACCTGTTGTCGTCGAGCATGGACTGAGGAAGAACCCTAAGATAA
CGCGCCGGCTGTCTGACTTGGCCGAGGCAGAAAAATAACAGAGTGGTAATGATGGCGAACTGAAGG--TTTGGATGTGTT
GGCCCAGACCCGACGCCGAGTACTTTCCGGCGACGGTGACGATCGACGACGAACAACGAACCTTGCTGATGCACTCTCGT
CGAGATAACTTTACGCCGAGATACACCACACCACAAGGAAGCTTGATCTCCAATACGTATGTGCACAAGCTAGCACAACT
CAACCTGATCGATTCCTTGACAGGATGTATATGCTAGTACTTGTTGCTAGTAGCCGTAAGCTAGCTAGCTACGTGACCGA
CTTGATCGATCCTTCGATGCACAACTCACGCACACGAGACTCTGGCGTATTGCCACAGGCTCGTATCGAGCCTGTTGTTG
ATCTGTATTACTTCACAAATCATCATGATTACAAGCCAGGGTTACAGGACTATATATACTAGCTACAACTAGTCTAGTCC
TATTCGGTGATCAGGTAGAAACCTACACGGACTCTTACTTGTATACATACACAGGAGCTGACACGGACACAAGTTGCCGT
GTTTAATTCTAACAATCACCCCCTAAACACGACGTCGTTACATTACAGCTCCAACGCTGATTCTTCTTTGTATCTTCAAG
AACTTCTCCCGATCCAAAGCCTTGGTCAGGATGTCCGCCATCTGATCATCGGTGCAAACGTAGTTGACCTTCATCTTAAC
TTCTTTCACGCAGTTCTTTATGTAGTGATACACCGTATCAGTGTGCTTGCTTCGATCATGCCGCACTGGATCTTCGCGTA
GAAAACTTTCAGACTTTCCATCAACATTGAGCACCACTTGTTCCGGATCTTGATCCATGAGATCACCGTATAGCCTCCTT
AGCCACACACCTTGACGCATCGCAGTGGCCGCTGCAATATACTCTATTGCATCAACTGCGGGTGCTTTACTCTTCTTGCT
CAGCGCTAGACGAGGTTCCATTAGAGCGTCAACTGGATTGCAATCTCTCATGACATGGCTTTCAAGTATCTTCCTTGTGT
ATGCCTCCTGGCATAGTGTGACCCCCTCCGTCTTTTGATGTACCTCTATCCTGGGGTAGTAGCTCAAAAGACCTAGATCA
TCCATCTTGAAAAGCACTTTCATCTGTAGCTTGAACTTTGCAATCACCCCTTCACCTGCTCCAGTAATTAATAGGTCGTC
GACGTAGATGCCAACTAGTAGACGATCCCTTCCTTCACCTTGCTTGTACATTGCATGCTCTAGTGGGGCTTTCTCAAATC
CAAGAGAAATTAATGTCCGATCAAGTTTGATGTTCCACTCCCGAGGTCCTTGCCATAGTCCATACAAGATTTTGTGTAAC
TTCAGTACCTTGTGCTCTTCACCCTCTTTGATGAAACCCGGTCGTTGATTCACATACACATCTCTTTCTATCTCGCTGTT
CGAAAACGCGGATTTTACATCCATGTGATGTATCTTCCATGATTCCTGAGCCGCGAGAGCAATGAGTAATCTCACTGACT
CCATCTTTGCAATGGGAAAGAACACTTCTTTGAAGTCCATACTTTCCTCTTGCACATACCCTTTGGCCACAATCTTCGCT
TTGTGGTTCATGCACCCTTCAACATATTTCTTGACCTTGAATTCCCACTTGAGCTCTATAGCATTTTTATTGTTGGGAAG
ATCCACAAGCTCCCATGAATTATTGTCATGGATTGACCTCAACTCTTCTTTTATAGCATGACGCCAACTCTCATTTGTAT
TTGCGTCTTCAAAATTGTCCGGTTCCTCAATGTGCAAACATTGCCATCCTTTCATCTTCACCGGCTCAATTGTCTGAAGC
TCTTCCTTCAGGAAGAGATCCGATACAAGTTGCACGTGTTTAATTCTAACAGGATGGAGGTCGGCAAGTTGTTCTCGTCG
TGGCCAAGATGCCACTA-------------------------TTCATTGCCGTCAAGCTGGACTTCCCAATGTGCGCATT
GTTGACCCATGGCCAGGGGAGACTTTGACTGTTAATCAACTAGAGAATACTTGCATCTACACGATCAAAGTCTCCAAGAC
CAGCAAGAGAGCCTAACAACCCTCGGGATAGTCGAGTACTACTACTACTGTTCCCAAACCATATAACAATGCATGTACGT
ACTGA
>SNPs
--------S-----------------------------S--------------S---SSS----S-----SS------S-
------S----------S-------------------S-------------------SSSSSSSSSS-------------
---------------S---S----S------------S-----------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS---S----------------S----------------S---------------S---------S------
-----------------------------------SS-----------------------------------S-------
-----S-------------------------S-----------------------------------------S------
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--------------SSS---------------------------------------------------------------
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-S-SS-----------------S------------------------S---S----------------------------
-------SS---------------------S---------------------------S---------------------
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-------------------------------------------------SS-SSSSSSSSSSSSSSSSS-----------
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S------------------------------------------S----S----------------S--------------
---S-----S--S-------------------------------------------------------------------
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--------------------------------------------------S---S-------------------------
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----------------------------------------------------------------------S--S---S--
------------------SS--------------------------------------------------------S---
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S-S-----------------------------------------------------------------------------
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---------------------------S-----S----------------SS----------------------------
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----------------------------------S---------------------------------------------
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---------------------------------S----------S-----------------------------------
-S---
>forward_543
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-------------------------------------------GCTCAGCTGGTGAACCACTC-----------------
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>reverse_3554
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---------------------------------GATACCTGTTGTCGTCGGCC---------------------------
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