>input_sequence_82495
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------ATGGATTCCCTCGCGTCCTT
GATCAACCTCGCCGCCTTGATCCCCGGCGCCTGCCGCGACGCGGAGATGCTGCCGGGTGCGCTCATCTCCTGTGGCGTCC
TCGAGGCAGCCGCAGCGCTCTGCCTCGCCATCTCCAGAGCGCCCGGAGGTATATTTCTCCACCATGGCAGAGCACCCTTC
TTCCTGTACTACGGCATCCTCGTCGCCGTGGTGATCTTCGGGCTCCTCGAGGCGTCGGCCGGCTTCTGGGTGTCAGGCGA
TGTGGTCGGACGGGGTGCCGTCGAGAAGACGATGCTGTGGCTGGGCCTCCTGCCCATCGTCTTCGTGGCTGCGCTTGGAG
GCTTTGTGATTCTGAAAATGAAGTAG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>chr2A_1_TraesCS2A01G466300
GGGCAGCTGATAAACAGGTAATATCTACCTTACTCCATCCGTTCCATAATATAGAATACTTTAGTGGATCGCCTTTCACC
TCCAAACTTCTACATTTATAATGATCTTACAATGAACTTGTGTTTATTTCAGGAAAATGTACTCCTTGAAAATTTGCAGT
CAACTGAATAATACTTGTTTGTAGGTCGAGACCTTGAGCAACTAATATTTATTTAAATGTTAATTGAGCACTTGCATAGT
TTAGAGAACATTAGCAAGTTGATCTTGAGATTAAAACTGTACACATTTTAATACCTAAAGTTGCATTGACCTATTTGCGC
AATTGTAGTCTTGATGGTATCCAACACGATAGATTGAGAAATAATTTTTAAAACAACTAAGAAATAGCAACTGTGCAAGA
AAATATTACATTGTACTAAAGCTGCGATAATAAAAATGGATTGGAGGGAGTAGCAACTTTGATCTAGAGATTAGAGATGT
GAAGATCTTAGTAATATCTAAAGTTTTTTGTTGTTGTGAAAGTACTAATATCTAAAGTTTTTTTTGCGAAAAGTAATATC
TAAAGTTGCATAAACGTATTTGTACACTGGTAATTTTGGTGATACGCAACTCGACCAGGTGAGAAATAATTTTTGAGAGA
GTAAGAAATGGCAGTTCCGAAAGCGAAAGAATAGTCTAGGAAGGAAAACGCAAAA-------------------------
--------------------------------------------------------------------------------
---------------------------------------------AAAAAAAATCAAAGAACGAATGTGAC---------
ACGAAAGTTTCTCAGTCGTCTTGGTTGCTTACGTACGCGGATGATCACGACAGAGAACCCAGTGCC--------------
------CTGGGAAGGGAAA-CCAAATGGCTTGGTTCGGTTCTTTCGGTTTCGGTTCTGGCTTGTGGCAAGGACTGCAAAA
GTCACATAATACTAGTGGGTTTGAATTCTCTCCACTTTGTCGCGCGTCTTCCTCCTCCTTATATAATCCCCACCTTTTCC
TAGCTCCAAACCTCAAGCCAAGCTCGCTCATAGCTCCACAGCCCACACACGAGACGTGCAATGGATTCCCTCGCGTCCTT
GATCAACCTCGCCGCCTTGATCCCCGGCGCCTGCCGCGACGCGGAGATGCTGCCGGGTGCGCTCATCTCCTGTGGCGTCC
TCGAGGCAGCCGCAGCGCTCTGCCTCGCCATCTCCAGAGCGCCCGGAGGTATATTTCTCCACCATGGCAGAGCACCCTTC
TTCCTGTACTACGGCATCCTCGTCGCCGTGGTGATCTTCGGGCTCCTCGAGGCGTCGGCCGGCTTCTGGGTGTCAGGCGA
TGTGGTCGGACGGGGTGCCGTCGAGAAGACGATGCTGTGGCTGGGCCTCCTGCCCATCGTCTTCGTGGCTGCGCTTGGAG
GCTTTGTGATTCTGAAAATGAAGTAGTTTTTGACGGGTAACGAAAATGATGTGGTTGATCCTTGCTTTCGACGTTCGCTA
TCATGTACCGATGTTGTTGTAATCTGTTAGTCTGTGTCAGTTGTAATCTGTTTGTTTGTGTATCAGCGGTGTCATTTATC
AGCTTTGAGGTTTAT--TTTCCTTCCAACTGTAGTATGTTTGTGGAGATGATATTTGGGTTATTGCGCTGTAACTAATAA
TAATGAAATAACGGAGCTTGTGTGTATGTCGTTGTGCGTTCGACCAATATGAAATTGTTGTTTTGGGGGATCTGATCTCA
GAGACGGAGCCAGGATTCAAACATAGGGGG-GCGG---ACAAA--GTTTTGCCTCTAATGTAGAGACTCGTAAAGAAAC-
-ATACAAAGACAATCTACA--TTTTT-TTTGTGAGGGAGACAGCCTAAATCTTCATCAAAACATGTGTCTTCTGTGATCA
ATTTCAA-TT-TTTTTC-TCGAAATTTATCATAAAGAAAATGCAA-AATCAACTCATGTGTTAATTAATCTAAATCTTTC
AGTACATGATGTGATAAACAATGCAAAACCTTGTCCTATGGGTAAACCGGTAAAGGGATATATTCCCTAATTAATCTTTC
ATTCTTA-------------------------------------------------------------------------
----------------------------------------------------TATAGTAACCACAGTTCGAATTGTGAGG
TTCTAAAGGCATGAATTA-------A------------------------------TAGAATAACTAACGAGACTAACCT
TAA-CCCCCTTTTCCTTGCTCGCCGCTTCTCAATATGGTCGCGGCCGGCCGGCCGGCCG--------CGCGTCC-----T
TGCAAGGATGGCCCTCGGCCCTCATCAGCACATACACGCCCTCTTGCGCGCAAGGATCGTCGGCTCAGGCTCA--TTGAA
ACGCCGCTGGTCAAGAACATTTTTTTAGGGTTGGCGCTCGTCAAGAACTG-CCCTAGACGGCTA----TCATCGATAGGC
ATCGCACGCAA-GAAAAACAAACGATCTTGATCTGATCTTGTCCCTTTTGTTGGGCTACT--GCTGCAGGTGTGCTAAAG
ATGGGCTTGGTGATTTTGTTGGGCTTCAC
>chr2B_379
AAGAAAAGCAATTCCGG---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------AAGA
AAATATTACATTGTACTAAAGTTGCGACAATTAATATGAATCGGAGAGAGTAGCAACTTTGATCTAGAGATTAGAGATGC
GTACATCTTAGTA------------------------------------------------------------TAATATC
TAAAGTTGCATAAACGTATTTGTACACTGGTAATTTTGGTGATACGCAACTCGACTATGCGAGAAATAATTTTTGAAAGA
GCAAGAAATGGCAGTTCCA------AAAGAATAATCTAAGAAGGAATATGACAGGGCGATTACGAAAGTTTCTCAATCGT
TTTGGTTGCTTACGTAGGCGGATGATCACGACAGGGGGAGCACAGCGAAGAGTACCCGGGCAGCACCCTGTCCCTGCGTC
ACTCTGGGAACGGAAAACCACAGTTCCGAGAATAATCTAAGAAGGAAAAAAAATCTAAGAAGGAATGTGACAGGGCGATC
ACGAAAATTTCTCAGTCCTTTTGGTTGCTTACGTACGCGGATGATCACGACAGGGGGAGCATAGAGTACCCAGCACCCGT
GTCACTCTGGGAACGGAAAACCAAATGGCTCAGTTCGGTTCTTTCGGTTTCGGTTCTGGCTTCGCG--------------
--------------GTGGGTTTGAAATCTCTCCACTTTGTCGCGCGTCTTCCTCCTCCTTATATAATCCCCATCTTTTCC
TAGCTCTAAACCTCAAGCCAAGCTCGCTCATAGCTCCACAGCACACA--CGAGACGTGCAATGTATTCCCTCGCCTCCTT
GATCAACCTCGCCGCCTTGATCTCCGAAGCCTGCCGCGACGCGGAGATGCTGCCGGGTGCGCTCATCTCCTGCGGCGTCC
TCGAAGCAGCCGCAGCCCTCTGCCTCGTCATCTCCAGAGCGCCGGGAGGTATATTTCTCCACCATGGCAGAGCACCCTTC
TTCCTGTACTACGGCATCCTCGTCGCAGTGGTGATCTTCGGGCTCCTCGAGGCGTCGGCCGGCTTCTGGGTGTCAGGCGA
TGTGGTCGGACGGCGTGCCGTCGGGAAGACGGTCCTCTGGCTGGGCCTCCTGCCCATCGTCTTCGTGGCTGCGCTTGGAG
GCTCTGTCATTCTCAACAAGAAATAGTT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>chr2B_788
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CTGGGAAGGGAAA-CCAAATGGCTTGGTTCGGTTCTTTCGGTTTCGGTTCTGGCTTGTGGCAAGGACTGCAAAA
GTCACATAATACTAGTGGGTTTGAATTCTCTCCACTTTGTCGCGC---TTCCTCCTCCTTATATAATCCCAACCATTTCC
TAGCTCCAAACCTCAAGCCAAGCTCGCTCATAGCTCCACAGCACACACACGAGACGTGCGATGGATTCCCTCGCCTCCTT
GATCAACCTCGCCGCCTTGATCTCTGGCGCCTGCCGCGACGCGGAGATGCTGCCGGGTGCGCTCATCTCCTGTGGCGTCC
TTGAAGCAGCCGCAGCGCTCTGCCTCGTCATCTCCAGAGCGCCAGGAGGTATATTTCTCCACCATGGCAGAGCACCCTTC
TTCCTGTACTACGGCATCCTCGTCGCAGTGGTGATCTTCGGGCTCCTCGAGGCGTCCGCCGGCTTCTGGGTGTCAGCCGA
TGTGGTCGGACGACGTGCCGTCGGGAAGACGATCCTGTGGCTGGGCCTCCTGCCCATTGTCTTCGTGGCTGCGCTTGGAG
GCTTTGTGATTCTGAAAACGAAGTAGTTTTTGGCGGGCAACGAAAATGAAGTGGTTGATCCTTCCTTTTGACGTTCGCTA
TCATGTACCGATGTTGTTGTAATATTTACGTCTGTGTCAGTTGTAATCTGTTTGTTTGTCTATCAATTGTGTCATTTGTC
AGCTTTGAGAGGTTTAATTTCCTTCCAACTGTAGTATGTTTGTGGTGATGATATTTGGGT-------CTGTAATTAATAA
TAATGAAATAAGGGAGCCTGTGTGTATGCCGTTGTGCGTTCAACCAATATGAAATTGTTGGTTTGGGGGATCTGATCT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>chr6B_1653
ATCCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GGGACGGAGCCAGGATTCAAACATAGGGGGCGCGG---GCAAA--ATTTTGCTTCTAATATAGAGACTCGTAAAGAAAC-
-ATACGGAGACAGTCTACG-TTTTTTCTTTGTGAGGGAGACAGCCTAAATCTTCATCAAAACATGTGTCTTCTGTGATCA
ATTTTAATTT-TTTT--CTCAAAATTTATCATAAAGAAAATGCAA-AATCAACTCATGTGTTAATTAACCTAAATCTTTC
AGTACATGATGTGATAAACAATGCAAAACCTTGTCCTATGGGTAAACCGGTAAAGGGATATATTCCCTAATTAATCTTTC
ATTCTTA-------------------------------------------------------------------------
----------------------------------------------------TATAGTAACCACAGTTTGAATTGTGAGG
TTCTAAAGGCATGGATTAATCTGATA------------------------------TAGAATAACTAACGAGACTAACCT
TAA-CCCCCTTTTCCTTGCTCGCCGCTTCTCAATGTGGTCGCGGCCGGCCGGCCGACCG--------CGCGTCC-----A
TGCAAGGATGGCCCTCGGCCCTCATCAGCACACACACGCCCTCTTGCGCGCAAGGATCGTCGGCTCAGGCTCAGATTGAA
ACGCCACTGGTCAAGAACATTTTTTTAGGGTTGGCGCTCATCAAGAACTG-CCCTAGACGGCTAGACCTCATCGATAGGC
ATCGCACGCAA-GAAAAACAAACGATCCTGATCTGATCTTGTCCCTTTTGTTGGGCTACTCTGCTGCAGGCGTGCTAAAG
ATGGGCTTGGTGATTTTGTTGGGCTTCAC
>chr5B_1656
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TCA
GGGACGGAGCCAGGATTTAAACATAGGGGG-GG--CGGGCAAA--ATTTTGCCTCTAATGT--AGACTCGTAAAGAAAC-
-ATACGGAGACAGTCTACA-TTTTTT-TTTGTGAGGGAGACAGCCTAAATCTTCATCAAAACATGTGTCTTTTGTGATCA
ATTTCAATTT-TTTT--CTCAAAATTTATCATAAAGAAAATGCAA-AATCAACTCATGTGTTAATTAACCTAAATCTTTC
AGTACATGATCTGATAAACAATGCAAAACCTTGTCCTATGGGTAAACCGGTAAAGGGATATATTCCCTAATTAATCTTTC
ATTCTTA-------------------------------------------------------------------------
----------------------------------------------------TATAGTAACCACAGTTTGAATTGTGAGG
TTCCAAAGGCATGGATTAATCTGATA------------------------------TAGAATAACTAACGAGACTAACCT
TAA-CCC-CTTTTCCTTGCTCGCCGCTTCTCAATGTGGTCGCGGCCGGCCGGCCGGCCG--------CACATCCATGCAA
TGCAAGGATGGCCCTCGGCCCTCATCAGCACACACACGCCCTCCTGCGCGCAAGGATCGTCGGCTCAGGCTCAGATTGAA
ACGCCGCTGGTCAAGAACATTTTTTTAGGGTTGGCGCTCGTCAAGAACTG-CCCTAGACGGCTAGACCTCATCGATAGGC
ATCGCACGCAA-GAAAAACACACGATCCTGATCTGATCTTGTCCCTTTTGCTGGGCTACT--GCTGCAGGCGTGCTAAAG
ATGGGCTTGGTGATTTTGTTGGGCTTCAC
>chr2A_1657
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CA
GGGACGGAGCCAGGATTCAAACATAGGGGG-GGGGCGGGCAAA--ATTTTTCCTCTAATGTAGAGACTCGTAAAGAAAC-
-ATACTCAGACAGTCTATG---TTTT-TTTGTGAGGGAGACAGCCTACATCTTCATGAAAACATGTGTCTTCTGTGGTCA
GTTTCAA-TT-TTTTTCCTCAAAATTTATCATAAAGAAAATGCAA-AATCAACTCATGTGTTAATTAACTTAAATCTTTC
AGTACATGATGTGATAAACAATGCAAAACCTTGTCCTATGGGTAAACCGGTAAAGGGATATATTCCCTAATTAATCTTTC
ATTCTTA-------------------------------------------------------------------------
----------------------------------------------------TATAGTAACCACGGTTCGAATTGTGAGG
TTCTGAAGGCATGGATTAATTTGATA---T------------------------AGTAGAATAACTAACGAGAATAACCT
TAA-CCCCCTTTTCCTTGCTCGCCGCTTCTCAATGTGGTCACGGCCGGCCGGCCGGCCG--------CACGTCC-----A
TGCAAGGATGGCACTCGGCCCTCATCAGCACACACACGCCCTCTTGCGCGCAAGGATGGTCGGCTCAGGCTCATATTGAA
ACGCCGCTGGTCAAGAACATTTTTTTAGGGTTAGCGCTCGTCAAGAACTG-CCCTAGATGGCTAGACCTCATCGATAGGC
ATCGCAGACAA-GAAAAACAAACGATCCTGATCTGATCTTTTCCCTTTTGTTGGGCTACT--ACTGCAAGCGTGCTAAAG
ATGGGCTTGGTGATTTTGTTGGGCTTCAC
>chr3B_1657
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CA
GGGACGGAGTCAGGATTCAAACATAGGGGG-GGGGGGGGCAAA--ATTTTGCCTCTAATGTAGAGACTCGTAAAGAAAC-
-ATACGGAGACAGTCTACG-TTTTTT-TTTGTGAGAGAGACAGCCTAAATCTTCATCAAAGCATGTGTCTTCTGTGATCA
ATTTCAA-TTTTTTT--CTCAAAATTTATCATAAAGAAAATGCAA-AATCAACTCGTGTGTTAATTAACCTAAATCTTTC
AGTACATGATGTGATAAACAATGCAAAACCTTGTTCTATGGGTAAACCGGTAAAGGGATATATTCCCTAATTAATCTTTC
ATTCTTC-------------------------------------------------------------------------
----------------------------------------------------TATAGTAACCACAGTTTGAATTGTGAGG
TTCTAAAGGCATGGATTAATCTGATA---T------------------------AG---AATAACTAACGAGACTAACCT
TAATCCC-CTTTTCCTTGCTCGCCGCTTCTCAATGTGGTCGCGGCCGGCCGGCCGGCCG--------CGCGTCC-----A
TGCAAGGATGGCCCTCGGCCCTCATCAGCACACACATGCCCTCTTGCGCGCAAGGATCGTCGGCTCAGGCTCAGATTGAA
ACGCCGCTGGTCAAGAACATTTTTTTAGGGTTGGCGCTCGTCAAGAACTG-CCCTAGACGGCTAGACCTCATCGATAGGC
ATCGCACGCAA-GAAAAACAAACGATCCTGATGTGATCTTGTCCCTTTTGTTGGGCTACT--GCTGCAGGCGTGCTAAAG
ATGGGCTTGGTGATTTTGTTGGGCTTCAC
>chr7B_1657
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CA
GGGACGGAGCCAGGATTCAAACATAGTGGG-GGCGGG--CACA--ATTTTGCCTCTAATGAAGAGACTCGTAAAGAAAC-
-ATACGGAGACAGTCTACG-TTTTTT-TTTGTGAGAGAGACAGCCTAAATCTTCATCAAAACATGTGTCTTCTGTGATCA
ATTTCAAATT-TTTT--CTCAAAATTTATCATAAAG--AATGCAA-AATCAACTCATGTGTTAATTAACCTAAATCTTTC
AGTACATGATGTGATAAACAATGCAAAACCATGTCCTATTGGTAAACCGGTAAAGGGATATATTCCCTAATTAATATTTC
ATTCTTA-------------------------------------------------------------------------
----------------------------------------------------TATAGTAACCACAGTTTGAATTGTGAGG
TTCTAAAGGCATGGATTAATCTGATA---T------------------------AG---AGTAACTAACGAGACTAACCT
TAACCCC-CTTTTCCTTGCTCGCCGCTTCTCAATGTGGTCGCGGC--------CGGCCG--------CGCGTCC-----A
TGCAAGGATGGCCCTCGGCCCTCATCAGCACACACACGCCCTCTTGCGCGCAAGGATCGTCGGCTCAGGCTCAGATTGAA
ACGCCGCTGGTCAAGAACATTTTTTTAGGGTTGGCGCTCGTCAAGAACTG-CCCTAGACGGCTAGACCTCATCGATAGGC
ATCGCACGCAA-GAAAAACAAACGATCATGATCTGGTCTTGTCCCTTTTGTTGGGCTACT--GCTGCAGGCGTGC-----
-----------------------------
>chr6A_1657
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CA
GAGACGGAGCCAGGATTCAAACATAAGGGG-GGCGGG--CAAA--TTTTTTCCTCTAATGTAGAGACTCGTAAAGAAAC-
-ATACAAAGACAATCTACA-TTTTTT-TTTGTGAGGGAGACAGCCTAAATCTTCATCAAAACATGTGTCTTCTGTGATCA
ATTTCAA-TT-TTTT--CTCAAAATTTATCATAAAGAAAATGCAA-AATCAACTCATGTGTTAATTAATCTAAATCTTTC
AGTACATGATGGGATAAACAATGCAAAACCTTGTCCTATGGGTAAACCGGTAAAGGGATATATTCCCTAACTAATCTTTC
ATTCTTACTCCCTCCGTTCCGAATTACTTGTTTTGGATTTGTCTAGATACGGATGTATCTAGACTCATTTTGGTGCTAGA
TACCTTCGTATCTAGACAAATCTAAGACAAGTATTTCGGAACGGAGGGAGTATATAGTAACCACAGTTTGAATTGTGAGG
TTCTAAAGGCATGGATTA-------A---T------------------------AG---AATAACTAACGAGACTAACCT
TAACCCC-CTTTTCCTTGCTCGCCACTTCTCAATGTGGTCGCGGC--------CGGCCGGCCGTCCGCGCGTCC-----T
TGCAAGGATGGCCCTCGGCTCTCATCAGCACATACACGCCCTCTTGCGCGCAAGGATCGTCGGCTCAGGCTCAGATTGAA
ACGCCGCTGGTCAAGAACTTTTTTTTAGGGTTGGCGCTCGTCAAGAACTG-CCCTAGACGACTA----TCATCGATAGGC
ATCGCACGCAA-GAAAAACAAATGATCCTGATCTGATCTTGTCCCTTTTGTTGGGCTACT--GCTGCAGGCGTGCTAAA-
-----------------------------
>chr6A_1657
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CA
GGGACAGAACCAGGATTCAAACATTGGGGA-GAGGGGGCGCAATTTTTTTGCCTCTAATGTAGAGACTCGTAAAAAAAAA
AAAACAAAGACTGTCTAGTTTTTTTTGC----GAAGGAGACAACCTAAATCTTCATCAAAACATGTGTCT-CTGTGAGCA
ATTTCATTTT-TTTT--CTCAAAAGTTATCATAAAGAAAATGCCATAATTAATTCATGTGTTAATTAACTTAATATTTCT
ACTACATGATGTGATAAACAAAGCAAAACCTTGTCCCATG--------GGTAAAGGGATATATTCCCTAATTAAT-----
-----TG-------------------------------------------------------------------------
----------------------------------------------------TGTAGTTACCACAATACGAATTGTGTAG
TTGTGAGGGCATAGATTAATCAGATTTAGAAAGGCAAGAAAGGACTAACTAACGAG---AATGACAAACGAGACTAACCT
TAACCCC-CTTTTCCTTCATTGCCGCTTCTCAATCTGATCGCGGC--------CGGT----CGGCTGCGCGTCT-----G
CGCAAGGATGGCCCTCGCCCCTCATCGGCACACACACGCCCTCGTGCGCGCAAGGATCATCCGCTCTGGCTCAGATTGAA
ACACCGCAGGTCAAGAAC-TTTTTTTAGGGTTGGTGCTCGTTAAGAATTGTCCTTAGACGGCTAGACCTCAGCAACACGC
ATTGCACAC-AAGAAAAATAAGCGATCCTGATCTGATCGTGTCCCTTTTG------------------------------
-----------------------------
>chr5A_1661
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--GACGGAGCCAGCATTCAAACATA-GGGG-GGCGGG--CAAA--ATTTTGCCTCTAATGTAGAGACTCGTAAAAAAAC-
-ATACGCAGACAGTCTATGTTTTTTT-TTTGTGAGGGAGACAGCCTAAATCTTCACCAAAACATGTGTCTTCTGTGATCA
GTTTCAATTT-TTTT--CTCAAAATTTATCATAAAGAAAATGCAA-AATCAACTCATGTGTTAATTAACTTTAATCTTTC
AGTACATGATGTGATAAACAATGCAAAACCTTGTCCTATGTGTAAACCGGTAAAGGGATATATTCCCTAGTTAATCTTTC
ATTCTTA-------------------------------------------------------------------------
----------------------------------------------------TATAGTAACCACTGTTCGAATTGTGAGG
TTCTGAAGGCATGGATTAATCTGATATAGT------------------------AG---AATAAATAACGAGACTAACCT
TAACCCC-CTTTTCCTTGCTCGCCGCTTCTCAATGTGGTCGCGGC--------CGGCCGGCCGGCCGCGCGTCC-----A
TGCAAGGATGGCCCTCGGCCCTCATCAGCACACACACGCCCTCTTGCGCGCAAGGATCGTCGGCTCAGGCTCAGATTGAA
ACGCCGCTGGTAAAGAATATTTTTTTAGGGTTGGCGCTCGTCAAGAACTG-CCCTAGACGGCTAGACCTCATCGATAGGC
ATCGCACGCAAAGAAAAACAAACGATCCTGATCTGATCTTGTCCCTTTTGTTGGGCTACT--GCTGCAGGCGTGCTAAAG
ATGGGCTCGGTGATTTTGTTGGGCTTCAC
>chr7D_1661
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--GACGGAGCCAGGATTCAAACATAGGGGG-GGCGGG--CAAA--ATTTTGCCTCTAATGTAGAGACTCGTAAAGAAAC-
-ACACGGAGACAGTCTACG-TTTTTT-TTTGTGAGGGAGACAGCCTAAATCTTCATCAGAACATGTGTCTTCTGTGATCA
ATTTCAATTT-TTTT--CTCAAAATTTATCATAAAGAAAATGCAA-AATCAACTCATGTGTTAATTAACCTAAATCTTTC
CGTACATGATGTGATAAACAATGCAAAACCTTGTCCTATGGGTAAACCGGTAAAGGGATATATTCCCTAATTAATCTTTC
ATTCTTA-------------------------------------------------------------------------
----------------------------------------------------TATAGTAACCACAGTTCGAATTGTGAGG
TTCTGAAGGCATGGATTAATCTGATA---T------------------------AG---AATAACTAACGAGACTAACCT
TAACCCC-CTTTTCCTTGCTCGCCGCTTCTCAATGTGGTCGCGGC--------CGGCCGGCCGGCCGCGCGTTC-----A
TGCAAGGATGGCCCTCGGCCCTCATCAGCACACACACGCCCTCTTGCGCGCAAGGATCGTCGGCTCAGGCTCAGATTGAA
ACGCCGCTGGTCAAGAACATTTTTTTAGGGTTGGCGCTCGTCAAGAACTG-CCCTAGACGGCTAGACCTCATCGATAGGC
ATCGCACGCAA-GAAAAACAAACGATCCTGATCTGATCTTGGCCCTTTTTTT----------------------------
-----------------------------
>SNPs
SS---SSSS-SSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
---------------------S-----S---S--S---S--S----S--------------------------------S
-S-S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
-------------------------------------------------------S-S-S----------------S---
-S----------------SSSSSSS--------S----S-------S-S-SS-SS-------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S-----S------------------
------S----------S-S---------------------------------S-SSSS--SS-SS--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------S-----
----------------------S---------------------------------------------------------
----S----------------------S---------------S------------------------------------
--------------------------S-----------------------------------------------------
-------------S---------S---------S----------------------------------------------
------------------S-------------S----S-----------S-------------S----S-----------
-----------------------S-S-SS------------------------------S-----SSS---------S--
---------SSS-S-------------------------------S--------------SSSSSSS------S------
-----------S-----S----------S------------S------------------S-------------------
--------------------------------------S------S----------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S------------------------------------------S---------
-----------------------------
>forward_85
-----------------------------------------------------------------GGATCGCCTTTCACC
TCCAA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_1464
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AGAAGACGATGCTGTGGCTG-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>forward_616
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TGGTGATACGCAACTCGACC------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_1772
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CGGAGCTTGTGTGTATGTCG-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
