>input_sequence_82482
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------------------------------------------ATGGAGGTGGAGGCTCACCATTACAGTCCTATAATGGA
TGCTATCCTCATGGAAATCAGGATCCGACCAATCTTTGGGCAAAGAGTAGACGAGAGCGCCGTGGAGGGCAACATCGAGA
AGCTAAAGAAGGTGCTGGAGGTGTATGAGTCGAGGCAGTCGAGCTCCAGGTACCTGGCTGGTGATTTCATCAGCCTCGCG
GACCTCAACCATGTGTCCACCATTTTGTGCCTAGGGATCACTCCGTACAGGTCAGTTCTCGACGCGTACCCACGTGTAAG
GGCATGGTGGGATTGCCTGAGGGCCAGGCCGGCGGTGAGGAGGGTGTCTGACCTAATGAATACGTCCGTGAAGAATGATC
TGAAATGA------------------------------------------------------------------------
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---------------------------------------------------------------------
>chr1B_1_TraesCS1B01G019400
GCCATTTCAGAACCGCATGTATACTAACCTTGTGAAGGCATCCATTTCAGAACCTCTACATGGCAGAACCACAGCAT---
-----TTGCTAGATAAATGTGTATCCTTTGAAAAGTATATACTCCATAT-AAAACCCTCCTCGTGGAACATGGGCGCACA
TTTTGACAAAGTTTGCGGTTGTAAGCTTCCATCCTCTACTATATAAGTATGATAAGATGAAATACTATGCTATGCTATCA
GTCAACCAGGTAGGCACATCAGTTGAG-------GTGAAGACAGAGACATATTTTGGCAATAAGAAGAGAGAAACCGGCC
GGCCAGAAGAAGAGCAGCGGACATGGCGGCCGCCGTGAAGGTGTAC-GGGGTGGCCAAGTCTTGGAACATAGCCAGGGTG
CACTTGATCCTGGAGGAGGCCAGCGTCGAGTACGAGGTCGTCGCCGTCGACTTCGCCGCCACCGAGCACAAGTGCCCCGC
CCACCTTGCCAGGAACTTATGTACTCTAGACTCTCTGGCTCTTCTATGT--ATCCTGGCTACTTTGTCTTTTAGTGTCTA
ATCAACGTCTAGCTGAATCTCAGTCCGGTAC--CAGTCAGATTTCCATCCTTTAGTAGCATGTAAGACCAGTTAGTAACA
CAACGATCATCGGGATTGAAGCGGTTGACCGGATAAAAATTCTGAATGACGACATGCTG--AAATATCAGCTAGCTGGAA
GATAGCAAGGGTGTTTGTTTTTCTTCTAGCGTTGATGTTGCTGATTAGCTGCTAAGTGGTACATGTGTGTGTGCTTTTTC
TCTTTTCACAGCCATTCGGTCAGGT--------------ATGGTGACTTCTGCCTCTGGGGTAAGAAACTTCACGAGCAA
ATTTTCTACTGAAATCAAACATGCTTCA----------------------------------------------------
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---------------------------------------------------------------------ACCCTTGCTTT
CTCACCACATATATTGCAGAGTCACGTG----CGATCACGAAATGTATGCCGCAAGTACAAACCGGAGCTTCTCGGGATC
GGCAACCAGGAGCTGGAGGGATCAGCAATGGTGGACGTGTGAATGGAGGTGGAGGCTCACCATTACAGTCCTATAATGGA
TGCTATCCTCATGGAAATCAGGATCCGACCAATCTTTGGGCAAAGAGTAGACGAGAGCGCCGTGGAGGGCAACATCGAGA
AGCTAAAGAAGGTGCTGGAGGTGTATGAGTCGAGGCAGTCGAGCTCCAGGTACCTGGCTGGTGATTTCATCAGCCTCGCG
GACCTCAACCATGTGTCCACCATTTTGTGCCTAGGGATCACTCCGTACAGGTCAGTTCTCGACGCGTACCCACGTGTAAG
GGCATGGTGGGATTGCCTGAGGGCCAGGCCGGCGGTGAGGAGGGTGTCTGACCTAATGAATACGTCCGTGAAGAATGATC
TGAAATGATTTAGTTGGCCATATGTTAGCATCATTTTTTTTTTCATGTGAGTCTTGATGGCAAAGGGGGAGAATGAAGTC
CTATTATGTTGCTCAGGATATGTCTTATGGGAGTTGGAAGTC---------CACTCTTTGATTTCCATCTTCTGATTTGT
GATTACTTTTTTAGTAACTTATCGACT-ATGTGTGGTATTTGGCTTGCTACTCTACTTGTGATTTTTATGGTGTACTAGA
TGACCCGGTGCGCCAAATGGCGCAGAGACCCATTTGAAACCATGTTCATGT--------GGAGAAATATTTGCCTTTTTT
TAGTAACTTTATGTTTGATCAAGGATAGAGACCATGTCAAACCCGAAGTGTTTTGAATGTGTATTTGGACAATGTGCCAT
TTGGCTCTATGTTACCCAAGTAAGGTGCAAGGTCCAAATTCAAGCATCAAGGGTAAAACCTTTTGTAACAGAAACGTTTG
CATTTGTAGGGATAGCATTTCTGCCAAGTTATACATGACTTTCAAAGATCAGTAAACTGAATCCGAAATTTACAGGTTGT
AGAGGAAAAAATTCTCGAAATGCCATTAGATAGGTACACAAACAATGAACATAGG--AAAAAAATT-AGTGCATGATCCC
AACCTTCTTGCTAACAACCAGCACAACAACAACCACTCCTAAAAATTGGCATTGGATAACTGATATTTTTTGTGTAGATA
AATCATTAATCTCCATAGGGGTAGGAGCTCCCTTATTTAATTGAGGGGTATGATTTTGACCGGATCATCACGCTTGTTTC
TGCAACATCACACTTGTTTCTGTGAATAAAAACTCTTAGAGAATATAGACCCTCAAAAAGGAAAAAACACTCTTTGGGAA
TGGATGGTTGAGACCGCTCCGACATGTGTTTTCGTTCTGTCGCTTGTTGTTCGGGGAGAGTAAACTCTAGGTGGCTAGGG
CAAACTCTCCCCTCGAAACTTCATTGGTGAGCCCGTGGATTCACCTTCCCTTTTCTACCGCTCCATCAA
>chr1D_1
GCCATTTCAGAACCGCATATATACTAACCTTGTGAAGGCATCCATTTCAGATCCTCTACATGGCAGCACCACAGCATGTC
AGCATTTGCTAGATAAATATGTATCCCTTGAAAAGTATATACTCCATATAAAAACCCTCCTCGTGGAACATGGGCGCATA
TTTTGACCAAGTTGGCGGTTCTAGGCTTGCAATAA---------------------------------------------
------------------------GAG-------GTGAAGACAGAGACATATTTTGGCAATAAGAGG---GAAACCGGAC
GGCCAGAAGAAGAGCAGCAGACATGGCGGCCGCCGTGAAGGTGTAC-GGGCGGCCAG-GTCTTGGAACATAGCCAGGGTG
ATCTTGATCCTGGAGGAGGGCAGCGTTGAGTACGAGGTCGTCGCCGTCGACTTCGCCACCGCTGAGCACAAGAGCCCCGC
CCACCTTGCCAGGAACGTATGTGCTCTAGACTATCTGGCTCTTCTATGT--ATCCTA--------------------CTA
ATCAACATCTAGCTAAATTTCAATCCGGTGCCACAGTCAGATTTCCATCCTT-AGTAACATGTAAGATCAGTTAGTAACG
CAACGATCATCGGGATTGAAGGGGTCGACTGGATAAAGAAACTGAATGACGATAGACCGAAAAATATCAGTTAGCTGGAA
GATAGCAAGGGTGTTTGTTTTTCTTTTAGCGTTGATGTTGCTGATTAGCTGCTAAGTGGTACATGTGTCTGTGGTTTTTC
TCTTTTCACAGCCATTCGGTCAGGTGCCTGTCTTGGAGGATGGTGATTTCTGCCTCTGGGGTAAGAAACTTCATGAGCAA
ATTTTCTACTGAAATCAAACATGTTTCA----------------------------------------------------
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---------------------------------------------------------------------AGCCTTGCTTT
CTCACCGCATCTATTGCAGAGTCGCGCG----CACTAAAT--ATGTATGCCGCAAGTACAAGCCCGAGCTTCTCGGGGTC
GGCAACCAGGAGCTGGAGGGATCAGCAATGGTGGACGTGTGGATGGAGGTGGAGGCTCACCATTACAGCCCTATAATGGA
TGCTATCCTCATGGAAATCAGGATCCGGCCGATCTTTGGGCAAAGAGTAGACGAGAGCGCCGTGGAGGGCAACATCGAGA
AGCTAAAGAAGGTGCTGGAGGTGTACCAGTCGAGGCTGTCGAGCTCCAGGTACCTGGCTGGTGATTTCATCAGCCTCGCG
GACCTCAACCATGTGTCCACCATGTTGTGCCTAGGGGTCACTACATACAGGTCAGTTCTCGACGCGTACCCACGTGTGAG
GGCATGGTGGGATGGCCTGAGGGCCAGGCCGGCGGTGAGGAAGGTGTCTGGTCTAATGAATCCGTCCGCGAAGAATT-TC
TGAAATGATTTAGTTGACCGTATTTTAGCATCATTTC---TTTCATGCGAGTCCTGATGCCAAAGGGGGAGAATGAAGTT
CTATTAGGTTGCTCGGGA--TGTCTTATGGGAGTTGGAAGTTCACAAGCATCACTCTTTGATTTCCATCTTGTGATTTGT
GATTACCTTTTCAATAACTTGTTCGACCATGTGTGGTGTTTGGCTTGCTACTCTACTTGTGATTTTTATGGTG-------
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---------------------------------------------------------------------
>chr1A_1
GCCATTTCAGAACCGCATATATACTAACCTTGTGCAGGCATCCATTTCAGAACCTCTACATGGCAGCACCACAGC-----
---ATTTGCTAGATTAATATGTATCCTTTGAAAAGTATATACTCCATACAAAAACCCTCCTCGTGGAACATGGGCGCATA
TTTTCACCAAGTTTGCGGTTCTAGGCTTGCAATAA---------------------------------------------
------------------------GAGGTGAAGAGTGAAGACAGAGACATATTTTGGCAATAAGAGG---GAAACCGGCC
GACC---AGAAGAGCAGCATACATGGCGGCCGCCGTGAAGGTGTACGGGGCGGCCAG-GTCTTGGAACATAGCCAGGGTG
CTCTTGATCCTGGAGGAGGCCGGCATCGAGTACAAGGTCATCGCCGTCGACTTTGCCACCGCCAAGCACAAGAGCCCCGC
CCACCTTGCCAGGAACGTATGTACTCTAAACTATCTGGCTCTTCTATGTATATCCTA--------------------CTA
ATCAACGTCTAGCTAAATTTCAATCCGGTGC--CAGTCAGATTTCCATCCTT-AGTAACATGTAAGATCAGTTAGTAACG
CAACGATCATCGGGATTGAAAGGGTCGACCGGATAAAAAAACTGAATGACAATTGACTG--AAATATCAGCTAGCTGGAA
GATCGCAAGGGTGTTTGTTTTTCTTTTAGCGTTGATGTTGCTGATTAGCTGCTAAGTGGTACATGTG--TGTGGTTTTTC
TCTTTACACAGCCATTTGGTCAGGTGCCTGTCTTGGAGGATGGTGACTTCTGCCTCTGGGGTAAGAAACTTCATGAGCAA
ATTTTCTACCGAAATCAAACATGTTTCAAGCCTTGCTTTCTTTTTTTCGCAAATACGCAAAACTTGCATATCATTTCATT
GATAGGAGAAGTTAGAACGAGTACAAGATATGATAGAACACAGGACACGGACGCAAGGGCGTGAACATGGTGTCTGGAGC
AGAGAGACATGGAATGCTCAACCCAAACAAAGAAAAAACACAGCTAAACTCGCCATCCTAGGATGTAGCCCAGACCAATA
ACACGACGACCAACATCTCCAGATCCAGAATCGAGGACGCCGCGAACAACCAAGACGACGCCTTCACGAAGGTGAACGAC
GCCGAGACGTCGTCGTCGTCCGATCCAGATAATCAGACCTAGGGTTTCCCCTGATGCTCAAAGAGGGGCACAGACAACGG
CCGTGACAGCGCCTCCAAGAAGGTGACGGCACCCACGGTTGTCACCGCTGCCAGCAAAAGATGCAGGGATTTCGCCCTGG
CCAGAGTCCGAGCAATCCCAAGCCAGCGAAGCACGAATTGGAGAGGAAGTCGGGCATAGGCATGAACCACGACCACATGA
ATGAGAGTGACGCCGGACACGCGAGCAACGAAGCGACGTAGGGACGGGAAGGCCACGGAGGTGGGCGGCTAGGCGGCTTG
GCGGATTGGGAGG-------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CAATGGAGGATGTGACGGTAGCCGGAGGCCCGAGCGAGCCAGGACCCGGAGGGTAGCAC
AGATCTGGGTCGCCAGGACCGGAGCATCAAGGACGCCGATGAGCTCAAGGAGCCGGAAGAGGGCACAGCTCCCAGATTAC
GTCGAAATCAAAGATGCACCGGGATGGATGGCCAACCAAGGCACCAACAGTCGAAATCAAAGATGCCCCAGCCTTGCTTT
CTCACCGCATATATTGCAGAGTCGCGCGCGATCACTAAAT--ATGTATGCCGCAAGTACAAACC----------------
------------------GGATTAGCAATGGTGGACGTGTGGATGGAGGTGGAGGCCCACCATTACAGTCCTATAATGGA
TGCTATCCTCATGGAAATCAGGATCCGGCCAATCTTTT-GCAAAGAGTAGACGAGAGCGCCGTGGAGGGCAACATCGAGA
AGCTAAAGAAGATGTTGGAGGTGTACGAGTCAAGGTTGCCGAGCTCCTGGTATCTGGCAGGAGATTTCATCA--------
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---------------------------------------------------------------------
>chrUn_259
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----------------------------------GTGAAGACAGAGACATATTTTGGCAATAAGAGG---GAAACCGGCC
GGCC---AGAAGAGCAGCATACATGGCGGCCGCCGTGAAGGTGTACGGGGCGGCCAG-GTCTTGGAACATAGCCAGGGTG
CTCTTGATCCTGGAGGAGGCCGGCATCGAGTACAAGGTCATCGCCGTCGACTTCGCCACCGCCAAGCACAAGAGCCCCGC
CCACCTTGCCAGGAACGTATGTACTCTAAACTATCTGGCTCTTCTATGTATATCCTA--------------------CTA
ATCAACGTCTAGCTAAATTTCAATCCGGTGC--CAGTCAGATTTCCATCCTT-AGTAACATGTAAGATCAGTTAGTAACG
CAACGATCATCGGGATTGAAAGGGTCGACCGGATAAAAAAACTGAATGACAATTGACTG--AAATATCAGCTAGCTGGAA
GATCGCAAGGGTGTTTGTTTTTCTTTTAGCGTTGATGTTGCTGATTAGCTGCTAAGTGGTACATGTG--TGTGGTTTTTC
TCTTTACACAGCCATTTGGTCAGGTGCCTGTCTTGGAGGATGGTGACTTCTGCCTCTGGGGTAAGAAACTTCATGAGCAA
ATTTTCTACCGAAATCAAACATGTTTCAAGCCTTGCTTTCT---------------------------------------
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>chr1A_438
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------------------------------------------------------GCCACCGCCAAGCACAAGAGCCCCGC
CCACCTTGCCAGGAACGTATGTACTCTAAACTATCTGGCTCTTCTATGTATATCCTA--------------------CTA
ATCAACGTCTAGCTAAATTTCAATCCGGTGC--CAGTCAGATTTCCATCCTT-AGTAACATGTAAGATCAGTTAGTAACG
CAACGATCATCGGGATTGAAAGGGTCGACCGGATAAAAAAACTGAATGACAATTGACTG--AAATATCAGCTAGCTGGAA
GATCGCAAGGGTGTTTGTTTTTCTTTTAGCGTTGATGTTGCTGATTAGCTGCTAAGTGGTACATGTG--TGTGGTTTTTC
TCTTTACACAGCCATTTGGTCAGGTGCCTGTCTTGGAGGATGGTGACTTCTGCCTCTGGGGTAAGAAACTTCATGAGCAA
ATTTTCTACCGAAATCAAACATGTTTCAAGCCTTGCTTTCTTTTTTTCGCAAATACGCAAAACTTGCATATCATTTCATT
GATAGGAGAAGTTAGAACGAGTACAAGATATGATAGAACACAGGACACGGACGCAAGGGCGTGAACATGGTGTCTGGAGC
AGAGAGACATGGAATGCTCAACCCAAACAAAGAAAAAACACAGCTAAACTCGCCATCCTAGGATGTAGCCCAGACCAATA
ACACGACGACCAACATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCAATGGAGGATGTGACGGTAGCCGGAGGCCCGAGCGAGCCAGGACCCGGAGGGTAGCAC
AGATCTGGGTCGCCAGGACCGGAGCATCAAGGACGCCGATGAGCTCAAGGAGCCGGAAGAGGGCACAGCTCCCAGATTAC
GTCGAAATCAAAGATGCACCGGGATGGATGGCCAACCAAGGCACCAACAGTCGAAATCAAAGATGCCCCAGCCTTGCTTT
CTCACCGCATATATTGCAGAGTCGCGCGCGATCACTAAAT--ATGTATGCCGCAAGTACAAACC----------------
------------------GGATTAGCAATGGTGGACGTGTGGATGGAGGTGGAGGCCCACCATTACAGTCCTATAATGGA
TGCTATCCTCATGGAAATCAGGATCCGGCCAATCTTTT-GCAAAGAGTAGACGAGAGCGCCGTGGAGGGCAACATCGAGA
AGCTAAAGAAGATGTTGGAGGTGTACGAGTCAAGGTTGCCGAGCTCCTGGTATCTGGCAGGAGATTTCATCA--------
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>chr5A_1569
GATTATTAAGGAG-------------------------------------------------------------------
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--------------------------------------------------------------------------ACTAGA
TGACCCGGTGCGCCAAATGGCGCAGAGACCCATTTAAAACCATGTTCATGT--------GGAGAAATAGTTGCCTTTTTT
TAGTAACTTTATGTTTGATCAAGAATAGAGACCATGTCAAACCCGAAGTGTTTTCAACGTGTATTTGGACAATGTGCCAT
TTGGCTCTATGTTACCCAAGTAAGGTGCAAGGTCCAAATTCAAGCATCAAGGGTAAAACCTTTTGTAACAGAAACGTTTG
CATTTGTAGGGATAGCATTTCTGCCAAGTTATACATGACTTTCAAAGATCAGTAAACTGAATCCGAAATTTACAGGTTGT
AGAGGAAAAAATTCCTGAAATGCCATTAGATAGGTACACAAACAATGAACATAGGGAAAAAAAATT-AGTGCATGATCCC
AACCTTCTTGCTAACAACCAGCACAACAACAACCACTCCTAATAATTGGCATTGGATAACTGATATTTTTTGTGTAGATA
AATCATTAATCTCCATAGGGGTAGGAGCTCCCTTGTTCAATTGAGGGGTATGACTTTGACCGGATCATCACGCTTGTTTC
TGCAACATCACACTTGTTTTTGTGAATAAAAACTCTTAGAGAATATAGACCCTCAAAAAGG-AAAAACACTCCTTGGGAA
TGGATGGTTGAGACCGCTCCGACATGTGTTTTCGTTCTGTCGCTTGCTGTTCAGGGAGAGTAAACTCTAGGTGGCTAGGG
CAAACTCTCCCCTCAAAACTTCACTGGCGAGCCTGTGGATTCACCTTCCCTTTGCTGCCGCTCCATCAA
>chr3B_1581
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------------------------------------------------------------------------GTACTAGA
TGACCCGGTGCGCCAAATGGCGCAGAGACCCATTTGAAACCATGTTCATGT--------GGAGAAATATTTTCTTTTTTT
TAGTAACTTTATGTTTGATCAAGGATAGAGACCATGTCAAACCCGAAGTGTTTTGAAGGTGTATTTGGACAATGTGCCAT
TTGGCTCTATGTTACCCAAGTAAGGTGCAAGGTCCAAATTCAAGCATCAAGGGTAGAACCTTTTGTAACAGAAATGTTTG
CATTTGTAGGGATAGCATTTCTGCCAAGTTATACATGACTTTCAAAGATCAGTAAACTGAATCCGAAGTTTACAGGTTGT
AGAGGAAAAAATTCTCGAAATGCCATTAGATAGGTACACAAACAATGAACATAGG-AAAAAAATGT-AGTGCATGATCCC
AACCTTCTTGCTAACAACCAGCACAACAACAACCACTCCTAATAATTGGCATTGGATAACTGATATTTTTTGTGTAGATA
AATCATTAATCTCCATAGGGGTAGGAGCTCCCTTGTTCAATTGAGGGGTATGATTTTGACCGGATCATCACGCTTGTTTC
TGCAACATCACACTTGTTTCTATGAATAAAAACTCTTAGAGAATATAGACCCTCAAAAAGG-AAAAACACTCCTTGGGAA
TGGATGGTTGAGACCGCTCCGACATGTGTTTTCGTTCTGTCACTTGCTGTTCGGGGAGAGTAAACTCTAGGTGGCTAGGG
CAAACTCTCCCCTCAAAACTTCACTGGCGAGCCCGTGGATTCACCTTCCCTTTTCTGCCGCTCCATCAA
>chr1A_1582
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TACTAGA
TGACCCGGTGCGCCAAATGACGCAGAGACCCATTTGAAACCATGTTCATGTCATCATGTGGAGAAATAGTTGCCTTTTTT
TAGTAACTTTATGTTTGATCAAGGATAGAGACCATGTCAAACCCGAAGTGTTTTCAACGTGTATTTGGACAATGTGCCAT
TTGGCTCTATGTTACCCAAGTAAGGTCCAAGGTCCAAATTCAAGCATCAAGGGTAAAACCTTTTGTAACAGAAACGTTTG
CATTTGTAGGGATAGCATTTCTGCCAAGTTATACATGACTTTCAAAGATCAGTAAACTGAATCCGAAATTTACAGGTTGT
AGAGGAAAAAATTCTTGAAATGCCATTAGATAGGTACACAAACAATGAACATAGGGAAAAAAAATT-AGTGCATGATCCC
AACCTTCTTGCTAACAACCAGCACAACAACAACCACTCCTAATAATTGGCATTGGATAACTGATATTTTTTGTGTAGATA
AATCATTAATCTCCATAGGGGCAGGAGCTCCCTTGTTCAATTGAGGGGTATGACTTTGACCGGATCATCACGCTTGTTTC
TGCAACATCACACTTGTTTTTGTGAATAAAAACTCTTAGAGAATATAGACCCTCAAAAAGG-AAAAACACTCCTTGGGAA
TGGATGGTTGAGACCGCTCCGACATGTGTTTTCGTTCTGTCGCTTGCTGTTCGGGGAGAGTAAACTCTAGGTGGCTAGGG
AAAACTCTCCCCTCAAAACTTCACTGGCGAGCCTGTGGATTCACCTTCCCTTTGCTGCCGCTCCATCAA
>chr7B_1583
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--------------------------------------------------------------------------ACTAGA
TGACCCGGTGCGCCAAATGGCGCAGAGACCCATTTGAAACTATGTT--------CATGTGGAGAAATATTTGCC-TTTTT
TAGTAACTTTATGTTTGATCAAGGATAAAGACCATGTCAAACCCGAAGTGTTTTGAACGTGTATTTGGACAATGTGTCAT
TTGGCTCTATGTTACCCAAGTAAGGTGCAAGGTCCAAATTCAAGCATCAAGGGTAAAACCTTTTGTAACAGAAACGTTTG
CATTTGTAGGGATAGCATTTCTGCCAAGTTATACATGACTTTCAAAGATCAGTAAACTGAATCCGAAATTTACAGGTTGT
AGAGGAAAAAATTCTCGAAATGCCATTAGATAGGTACACAAACAATGAACATAGG--AAAAAAATT-AGTGCATGATCCC
AACCTTCTTGCTAACAACCAGCACAACAGCAACCACTCCTAATAATTGGCATTGGATAACTGATATTTTTTGCATAGATA
AATCATTAATCTCCATAGGGGTAGGAGCTCCCTTGTTTAATTGAGGGGTATGATTTTGACCGGATCATCACGCTTGTTTC
TGCAACATCACACTTGTTTCTGTGAATAAAAACGCTTAGAGAATATAAACCCTCAAAAAGG-AAAAACACTCCTTGGGAA
TGGATGGTTGAGACCGCTCCGACATGTGTTTTCGTTCTGTCGCTTGTTGTTCGGGGAGAGTAAACTCTAGGTGGCTAGGG
CAAACTCTCCCCTCGAAACTTCACTGGCGAGCCCGTGGATTCACCTTCCCTTTTCTGCCGCTCCGTCAA
>chr5A_1583
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------ACTAGA
TGACCCGGTGCGCCAAATGGCGCAGAGATCCATTTGAAACCATGTT--------CATGTGGAGAAATATTTGCCTTTTTT
TAGTAACTTTATGTTTGATCAAGGATAGAGACCATGTCAAACCCGAAGTGTTTTGAAGGTGTATTTGGACAATGTGCCAT
TTGGCTCTATGTTACCCAAGTAAGGTGCAAGGTCCAAATTCAAGCATCAAGGGTAAAACCTTTTGTAACAGAAACGTTTG
CATTTGTAGGGATAGCATTTCTGCCAAGTTATACATGACTTTCAAAGATCAGTAAACTGAATCCGAAGTTTACAGGTTGT
AGAGGAAAAAATTCTCGAAATGCCATTAGATAGGTACACAAACAATGAACATAGG--AAAAAAATTTAGTGCATGATCCC
AACCTTCTTGCTAACAACCAGCACAACAACAACCACTCCTAATAATTGGCATTGGATAACTGATATTTTTTGTGTAGATA
AATCATTAATCTCCATAGGGGTAGGAGCTCCCTTGTTCAATTGAGGGGTATGATTTTGACCGGATCATCACACTTGTTTC
TGCAACATCACACTTGTTTCTATGAATAAAAACTCTTAGAGAATATAGACCCTCAAAAAGG-AAAAACACTCCTTGGGAA
TGGATGGTTGAGACCGCTCCGACATGTGTTTCCGTTCTGTCACTTGCTGTTCGGGGAGAGTAAACTCTAGGTGGCTAGGC
CAAACTCTCCCCTCGGAACTTCACTGGCGAGCCCGTGGATTCACCTTCCCTTTTCTGCCGCTCCATCAA
>chr5A_1583
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------ACTAGA
TGACCCGGTGCGCCAAATGGCGCAGAGACCCATTTGAAACCATGTT--------CATGTGGAGAAATAGTTGCCTTTTTT
TAGTAACTTTATGTTTGATCAAGAATAGAGACCATGTCAAACCCGAAGTGTTTTCAACGTGTATTTGGACAATGTGCCAT
TTGGCTCTATGTTACCCAAGTAAGGTGCAAGGTCCAAATTCAAGCATCAAGGGTAAAACCTTTTGTAACAGAAACGTTTG
CATTTGTAGGGATAGCATTTCTGCCAAGTTATACATGACTTTCAAAGATCAGTAAACTGAATCCGAAATTTACAGGTTGT
AGAGGAAAAAATTCTTGAAATGCCATTAGATAGGTACACAAACAATGAACATAGGGAAAAAAAATT-AGTGCATGATCCC
AACCTTCTTGCTAACAACCAGCACAACAACAACCACTCCTAATAATTGGCATTGGATAACTGATATTTTTTGTGTAGATA
AATCATTAATCTCCATAGGGGTAGGAGCTCCCTTGTTCAATTGAGGGGTATGACTTTGACCGGATCATCACGCTTGTTTC
TGCAACATCACACTTGTTTTTGTGAATAAAAACTCTTAGAGAATATAGACCCTCAAAAAGG-AAAAACACTCCTTGGGAA
TGGATGGTTGAGACCGCTCCGACATGTGTTTTCGTTCTGTCGCTTGCTGTTTGGGGAGAGTAAACTCTAGGTGGCTAGGG
CAAACTCTTCCCTCAAAACTTCACTGGCGAGCCTGTGGATTCACCTTCCCTTTGCTGCCGCTCCATCAA
>SNPs
------------------S-----------------------------------------------S-------------
------------------S-----------------------------------------------------------S-
-------S------------S--S----S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------S-SSS----------
------------------S-------------------------------SS-S-SSS----------------------
-S-------------------------------------------------------S--S-----------S-------
----------------S---------------S-----------------------SSSSSSSSSSSSSSSSSSSSS---
--------------S---S---S------S----------------------S----S---------S-----------S
---------------------S---S-------------SS-----------S-SS------------------------
-------------------------S------------------------------------------S----S------
-------------------------------------------------------------------------S------
-----------------------S--------------------------------------------------------
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----------------------------------------------------------------------S---------
------S----------------S--S------SS-S-SSSS----------------------S------------S--
-----------------------------------------S--------------------------------------
---------------------------S----------------------------------------------------
-------------------------S----------S-------------------------------------------
-----------------------S------------S-----S-S--------------------------------S--
-------------S---------------------------S--------SS---------S------S-------SS--
----------------S--S---S------------SSSS-------S-----S-----S-------------------S
------S-------S---SS---------------------S-----------------------------S--------
------S----S-S------S-SSSSS----------S------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
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------------------------------------------S-------------------------------------
----------------------------------S---------------------------------------------
-------------------------------------------------------------S----------S-------
--------------------------------------------------------------------------------
-----------------------S---S----------------------------S------------
>forward_168
--------------------------------------------------------------------------------
--------------------------------------------------------------------CATGGGCGCACA
TTTTGACA------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>reverse_2197
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------AGTCGAGCTCCAGGTACCTG------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>forward_1955
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TATTGCAGAGTCACGTGCGA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>reverse_3384
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TTGGTGAGCCCGTGGATTC---------------------------
