>input_sequence_82436
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----------------------------------------------------------------ATGAGACGACATCCAC
TTGAGCAAGTAAACCAGGTGCGGCGCAGACGCA--------------GAGAGAAAGAAAGGAAGCAAGGGGAGGAACAGG
ATCTAGGGGCTGCTATGGCGTCGGCGGCGAGCAGGAAGGCGCCGTCGCTGGTGGTGGCGGCAAGCGTGGGCGCCGTGGAG
GCGCTCAAGGACCAGGCGGGCCTGTGCCGCTGGGGCTACCCGCTCCGCTCGCTCTACCGCCACGCCGCCGCCGCGCCCAG
GGTCCGCGCCCTGTCCGCCTCGCTCTCCGAGGCA------GCGGCCGCCGCGGCTCCCCGACCGGCGCCTTTGTCCGCGG
AGGACGCGAAGCTGCGCAAGGCGCACCACCTCGTCTGCTGGGGCCCCAACTGA---------------------------
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>chr6A_1_TraesCS6A01G134500
GCTAAGCTAGCTAGGAGTTCTGTGTGTTCTGGTTGGATGGAAGAACCACCAAATAAGATTATTAGCTCTCTTATAAATGA
TGCTACTATGATTGCCAGGCATAAAGAGTGTTTGAATGTCAAAAAAAAAAAGGTGCATGGGAGTCTAGTGGGTAAGTCTA
GTTTCTTCCGATCAAGTATTAGGCTCGATTGTTCTCTCGAGAACTTTATAGTTAGATATAGAAAAGGGCTTTTGATTTTG
AAAGGTAAATCATTTTGAAAGTTGCAACTTTCAAATTGGAAACTTGAGAATAGAATGTAGGGAATCAATTTGTGGTCCTA
AACTTGACATTGGTGCTCGTATTTTTCTGGATTTATTTCAACCTTTTAGTTGATGTGTGTTAAATGGGAAGAGACATTCC
CATCGATTACGAAAGCGTCTGTGACAACTTTTAACAATCTTAAGATGATGTGCCGGCCCATCCTCTCGAAGATACGCATA
AAAGTAGTGTGTGTGCCCATACATTATGTGTATTGTGTATATGCGTTCATAAGATGAAATGTATATGCGTATGTATAACG
TCTGTACTATGTTTAAAAAAATAACCAAAAGACCATGACGTGGCTAGGGAGGATGGTGGACCGGCCTCGCGACTTTATAC
AGCCAACGGACATAACTTGAACTGACAGCCATCGGTTTGACCAAGTTAATTA---GTAGAGTATTATTTTTCTTTTGCGA
ATGAGAGAATAAATTAGCTGTAACCACTAATCTACCAATTATTTCACGTTCCTAAAAACAATTTATTTTGATTCTAAAAA
ACA-ATTTGTTTCACGTTCAGCATGTGTAGCGGAGAG-------------------AACTTTCTTGTACCGCGCCACGTC
TTGTCCGCCGCCCCGTTTCATCGGACGCGCCGTCCAAAACAGGCGGCCCGCTCCCTGTTTTCCCCTAGGCCGCTCCTCCC
TTTCGCCGCCTGTTTCGCGTCCCCGGTCGCGTATAAAAATGGCAAC-CCCCGCAGAGATCGCCGATGAGACGACATCCAC
TTGAGCAAGTAAACCAGGTGCGGCGCAGACGCA--------------GAGAGAAAGAAAGGAAGCAAGGGGAGGAACAGG
ATCTAGGGGCTGCTATGGCGTCGGCGGCGAGCAGGAAGGCGCCGTCGCTGGTGGTGGCGGCAAGCGTGGGCGCCGTGGAG
GCGCTCAAGGACCAGGCGGGCCTGTGCCGCTGGGGCTACCCGCTCCGCTCGCTCTACCGCCACGCCGCCGCCGCGCCCAG
GGTCCGCGCCCTGTCCGCCTCGCTCTCCGAGGCA------GCGGCCGCCGCGGCTCCCCGACCGGCGCCTTTGTCCGCGG
AGGACGCGAAGCTGCGCAAGGCGCACCACCTCGTCTGCTGGGGCCCCAACTGAGCTCCTTCTCTCCGCTTCATGTCACCA
CCGGCACATGAGCATATATAAGTAGCTGATGAATGCCTGTGTCAATGGTGTCGGGATTAGTAACAAAAGGCTTGCTTTGC
TGTTTCGCCGGAGAAAGCAGAGCCGTCATTGTGTGCAGCGCCGGTGAACCGCTCCGGCCTCGGAGGAGTA-GGACGGTTC
ATCAACGCTGCACTCAATGGCACCTTTGCGTCTCTTCCTCCTCTTCGTCTTCCCCAGTAGTAGTGTCTGGTTGCATCTGG
CTAGCTTAGCTTCCGTAGACGCAAGCAGGAATCATGGCTTTAGCTTTTGAGGCCGGGACATCACCCATTTTCTTTTG---
-TAGTAGTATGATGAGGTGTGCGA------GGCTATTACGATGGTTGTACTGCGGTGGAGAACTGACCGGCGTTGTTGTA
CTACAGATCGTACTATGCTTATGTTGTGACTTGTGTCGACTACTGCCCTCCACCTTGATTTGTCATCTGGATCTCAAATC
GGTCAGAGATCCATGAGGATTGAGGCCCGTGGGGCTGGCGACGGCCTTTGGG----------GGTGACAGTACAGTAGTA
CCCAAATCAAATTCAACTTGCTAAACTCAACTGCCAGTAGTACCGAAATCAAACGGACGTACGTAGTACTAGCGAG----
--TAGGAGTAGTACGAACTGTACTACTGCTAATGAACTG-AAATCTTCGTCATGCTGTAGTA-CAAGTCAGACGGCA-GT
ATTTCCTCGCGAAAATGCAAGATGGAGCACGTCTAAATCCCGTCATGCTGTGTCGGGATTAGTACCGCAGCGGTGACCGC
ACTGACAGTTCCCATC----GGGAACTTGCAGGTTATTATTCCCAGATCCTATATGCTTCTTCTTCTTCTTC----GCTT
GAGCACGTCTAAAAGCGCCCGGAAGCATTTCATTTTCATGGAGAAGAAAGTGTTATTAGAGCACTCCAACGGTCGATTCA
AACGGACGGCGTATTTGTTCGCTTTTTGTTTGTTTGGATCGGCCGCCCGCC
>chr6D_621
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------------------------------------------------------------CCCGCCTCGCGACT---TAC
AGCCAACTGACATAATTTGGACTGACAGCCCCCGGTTTGACCGAATTAATTACTAGTAGAGTATTATTTTTCTTTTGCGA
ATGAGAGAATAAATTGCCTTTAACCACTAATCTACT-ATTATTTCACGTTCC-AAAAACAATTTATTTCGATTCTAAAAA
AAATATTTATTTCACGTTCAGCATGTGTAGCGGAGAGAGAGTGTGGTGCGATCGCGAACTTTCTTGTGC--CGCCACGTC
TTGTCCGCCACCCCGTTTCATCGGACGCGACGTCCAAAACCGGCGGCCCGCTCCCCGTTT-CCCCTAGGCCGCTCCTCCG
TTTCGCCGCCTGTTTCGCGTCTCCCATCGCGTATAAAAATGGCATCTCCCCGCAGAGATCACCGACGAGACAACAGCCAC
TCGAGC-AGTAAACCACGTGCGGCGCAGACGCA--------------GAGAGAAAGAAAGCAATCGAGGG------CAGG
AGCTAGGGGCTGCGATGGCGTCGGCGGCGAGCAGGAAGGCGCCGTCGCTGGTGGTGGCGGCGACCGTGGGCGCCGTGGAG
GCGCTCAAGGACCAGGCGGGCCTGTGCCGCTGGGGCTACCCGCTCCGCTCGCTCTACCGCCGCGCCGCCGCCGCGCCCAG
GGTCCGCGCCCTGTCCGCCTCGCTCTCCGATGCC------GCCGCCG------CTCCCCGGCCGGCGCCTTTGTCCGCGG
AGGACGCGAAGCTGCGCAAGGCGCACCACCTCGTCTGCTGGGGGCCCAACTGAGCTCCTCTTCTCCGCTTCATGTCTCCA
TCGGCACATGAGCATAC--------CTGATGAATGCCTGTGTCAATGGTGAT----------------------------
TGTTTCGCCAGAGAAAGCAGAGACGTCATTGCGTGCAGCGCCGGTGAACCGCTCCGGCCTCGGTGGAGGA-GGACGGTTC
ATCAACGCT-------ATGGCGCCTTTGCGTCTCTTCCTCCTCTTCGTCTTGCCCACTAGTAGTATCTCGTTGCATCTGG
CTAGCCTAGCTTCCGTAGACGCAAGC------------------TTTTGAGGCCGGGAGATCACCCGTCTTGTTTTTGTA
CTAGTAGTATGATGAGGTGTGCGA------GGCGATTACGATGGTTGTACTGCGGTGGAGAGGTGACCAGCGTTGTTGTA
CTACAGATCGTACTATGCTTGTGTTGTGTCGACTACT---TACTGCCCTCCTCCTTTATTTGTCATCTGGATCTCAAATC
GGTCAGAGATCCATGAGCT-------CCGTCGAGCTGGCGATGGCGTTTGGG----------GTG------ACAGTAGTA
CATC-----------GCTTGCTAAACTCAACTGCCAGTAGTACCGAAATCAAATGGACATAGCTAGTAGCAG------TA
CATAGTAGTAGTACGAACTGTACTACTGCTAATGAACTTTAAATCGTTGCCATGCTGTAGTACCAAGTCAGATGGCA-AT
GTTTCCTCGCGAAAATGCAAGATGG-------------------------------------------------------
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>chr6B_834
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--------------------------------------------------------AACTTTCTTGTAC--CGCCACGTC
TCGTCCGCCGCCCCGTTTCATCGGACGCGCCGTCCAAAACCAGCAGCCCGCTCCCCGTTTCCCCCTAGGCCGCTCCTCCG
TTTCGCCGCCTGTTTCGCGTCCCCGATCGCGTATAAAAATG--ATCTCCCCGCAGAGATCACCGACAAGACG--AGCCAC
TTGAGC-AGTAAACCAGGTGCGGTGCAGAAGGAGAGATCGAGAGATCGAGAGAAAGAAAGCAATCGAGGGG------AGG
AGCTAGGGGCTGCGATGGCGTCGGCGGCGAGCAGGAAGGCGCCGTCGCTGGTGGTGGCGGCGAGCGTGGGCGCCGTGGAG
GCGCTCAAGGACCAGGCGGGCCTGTGCCGCTGGGGCTACCCGCTCCGCTCGCTCTACCGCCACGCCGCCGCCGCGCCCAG
AGTCCGCGCCCTGTCCGCCTCGCTCTCCGAGGCCACCGCGGCCGCCG------CTCCCCGGCCGGTGCCTTTGTCCGCGG
AGGACGCGAAGCTGCGAAAGGCGCACCACCTCGTCTGCTGGGGGCCCAACTGAGCTCCTCTTCTCCGCTTCATGCCTCCG
TCGGCACATGAGCATGCACAAGTAGCTGATGAATGCCTGTGCCAATGGTGAT----------------------------
TGTTTCGCCAGAGAAAGCAGAGGCGTCATTGTGTGCAGCGCCGGTGAACCGCTCCGGCCTCGGAGGAGGCCGGACGGTTC
ATCAACGCTGCACTCAATGGCACCTTTGCGTCTCTTCCTCCTCTTCGTCTTCCCCAGTAGTAGTATCTCGTTGCATCTGG
CTAGCTTAGCTTCCGTAGACGCAAGCAGGAATCATGGC-TTAGTTTTTGAGACCGGGAGATCCCCATTA----TTTG---
-TAGTAAGGAGTAGTACGAGGCGAGAGCCTGGCGATGGCGCCGGCTGTACTGCCGTGGGGAACTGACCAGCGTTGTTGTA
CTACAGATCGTACTATGCTTGTGTTGTGTCGA-----------------CCTCCTTGATTTATCATCTGGATCTCAAATC
GGTCAGAGATCCATGAGCT-------CCATCGAGCTGGCGATGGCGTTTGGGCCAATGAAATGGTGACAGTAC--TACTA
CATC-----------ACTTGCTAAACTGAACTGCCGGTAGTACCGAAATCAAATGGACGTAGCGAGTAGTAGTAGTAGTA
CAGAGTAGTAGTACGAATTGTACTACTGCTAATGAACTG-AAATCGTCGTCATGCTGTAGTA-CAAGTCAGATGGCAGGT
ATTTCCTCGCGAAAATGCAAGATGGCG---------------------------------AGTACTGCAGCGGTGACCGC
ACTGACAGTTGACACCATTTGGGAACTTGCAGGTTATTATTCCCAGATCCTATATGCTTCCTCTTCATCATCTTTTGCTT
GAGCACGTCTAAAAGCGCCCGGAAGCATTTCATTTCCATGGAGAAGAAAATGTTATTA----------------------
---------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-----------SSS---
-------S-------S---S----------SS----------S-S-----------------------------------
---------------SS--S---------------SS---------------S---------------S-----------
-S------S------------------------------------------------------------SS---------
----------------------------------------S--------------S----S------------------S
-------------------------S------------------S---------------S----S---------S----
------S-----------------------------------------------------S--S-S-----SSSSS----
-S-----------S-----------------------------------------------S------------------
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---------------------------------S--------S----SSSSSS-------S-------------------
-------------------------------------------S---------------SS---------------S---
S---------------S-S-------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
---------S------------S---------------------------------------------S-----------
----------------------------------------------------------------S---S-----------
--------------------------------------S----S--------------S-------S-S--S--------
---------------------------------S----------------------------------S-----------
--------------------S-------S-SSS-SSSSSS-----------S----------------------------
-----------------SSSSSSSSS----S-S--------S---S----------------------------------
-SSSSSSSSSSSSSS--------------------------------------S-------SS-----S---SSSS----
-----S---------------------------------------S--------------------------S-------
-------------------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S--------------
----------SS--S---------------------------------------------S-----S--S----------
-----------------------------------S-------------S--------SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_614
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----------------------------------ATGACGTGGCTAGGGAGGAT--------------------------
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>reverse_1508
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-------------------------------------------------------------------AGGCTTGCTTTGC
TGTTTCG-------------------------------------------------------------------------
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