>input_sequence_82417
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--------------------------------------ATGCACGAGCGCGACGTGTCCACCAGCATAGCGCACCGCTGC
GAGCTCAAGTCGTTGCTTGCTGCTCGGGGCTGCGCCTTCTCCCTCCCGCAGCTCCTCGTCGGCGGCCGGCTCATCGGCGG
CCCCAAAGATGTTAGGCAGCTGCACCAGGCCGGCGGGCTGCGGCCCCTCCTCGACGGCGCCCCAAGGCCGAGC-C-CTGC
CTTCGTCTGCCAAGCCTGCAAGAGGGTCGGCTCCGAGCCCTGCCCAGAGTGCAGCGAGTCCCG---CAACAAGATGCTGG
ATCATGGCATTACGGAGGAGGAGGAGG-----------------------------------------------------
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---AGAGGGTTGTCCTTTTTTATCCAACTCAAGGTGACACTTCGCTTCTCTCCTTCCTAAT-----------TGCTT---
-----------------------------------------AG-------------------------------------
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-------------------------------------------------------------------------------
>chr4A_1_TraesCS4A01G490100
GATATGGATCTACCGCCTCTCTGGCCCTGGAAGCGTCCCCGATGACCTGCGGCGCGGTGACCTAGTCAGATTTTTGTATA
GTTATTTTATCTGAAAAAATAGCATTTTAGACGGCTTAATTTGTGGTTTCTAATACAATGTAAGATCTAGCCAAGACATC
AAGCGTGCACAACTGCACACCTCCCAATTATTAATAAGAATAAAAC----------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------AAGATTA
ATTTCA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AGAAAGCTTTCCGCCAAGGTATTTGCCCGAGAGAGGGAG-------
-----------------AGAGAGGTAGTACCGTGGCAGTCCTCATTTTCTCCTCATGTGCATGTCACGTGATGTGGTGAT
AGAGAGCATACACAT----GAGTGCTCGTGCCATTTTGTCCTATACGCTCCATGTGCATGCCCTTAGCGTGTGTGCGCCT
GCGCCGGGACCCTGTCGACGTTCACTCGCAAGAGTCTCCTCGAAAGT-AATAATCCAAGAACCTACGCGTATTTTAATTT
TCA---GTATAATACTTGAGAC-------G--------------------AAGTACTACTACTCTTTCAAATCCAGAGAA
GAT-----------------------------------------------------------------------------
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-------------AAGAATCCAATGAGATTGTCCCATCGGATTCCAGTGTTTGAAACTATGTATTGTGAGTGGGAGAGGC
CAAGGTAATTAACAAG-----GCGGTGTGAGCACCTAGCTAGGCAATCGAC-AAGGACGCATAGCATACGAGGAATTAAC
AA----------GGAGATGTGACGAGGCTCGACAGTAGAGGCACAACCCACAGTGCCATGCATGTGATGTGATGTGATGT
GATG---------------------------------TGACAGTAGAGGAGATGAACCACAACTAAGTGAGAGAGAGACG
CATGCAGCACTTGTCCCCGTCTCCAAACA----------------------------------CTAGCTACACTCT----
-TCTTCGGTGATGAGGCCACCGGACATGGATGACCCCGGCCGTAGCTCGCAC------------GCCAAGGAGGAGCTGC
AGCCGGAGGTGCTTCTCTACACGGCGTC--------AGC------GTCGCGCCGCAGAGGGCGGTCCTCCGCCGACCTCT
ACGCCTTGCGCGCCCTGCTGTGGGGCTACGGCCTGACCATGCACGAGCGCGACGTGTCCACCAGCATAGCGCACCGCTGC
GAGCTCAAGTCGTTGCTTGCTGCTCGGGGCTGCGCCTTCTCCCTCCCGCAGCTCCTCGTCGGCGGCCGGCTCATCGGCGG
CCCCAAAGATGTTAGGCAGCTGCACCAGGCCGGCGGGCTGCGGCCCCTCCTCGACGGCGCCCCAAGGCCGAGC-C-CTGC
CTTCGTCTGCCAAGCCTGCAAGAGGGTCGGCTCCGAGCCCTGCCCAGAGTGCAGCGAGTCCCG---CAACAAGATGCTGG
ATCATGGCATTACGGAGGAGGAGGAGG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---AGAGGGTTGTCCTTTTTTATCCAACTCAAGGTGACACTTCGCTTCTCTCCTTCCTAAT-----------TGCTT---
-----------------------------------------AGAGACTGAACTTGCTTAGAGAGCCGTTTTCCTTTTCTT
GATGCTGACATAACTTGATCTTGTTGCGC---------------------------------------AGCTGATTT---
-----------------------------CT--TGTGTAAACTAAATCGTTCTTTCTTGTCTATGTTTCTTTTCAGATGT
TTCAGTGGGAGGTAGAGGCAGAGAGATGGATGCGAGTTTCAGTGTTTCTCTGGGCGCCATGAGACCCCTTCTTAAGAAGC
TTGACATGATGCTAGGTCCTCATGGATGCAAGCTGACCAAGGGGGTCAATGATAGGTCGCAGCTCCTCAAAGATGATCTT
GAAGAAATAGCCACATACCTTGAAGATCTGGTAGAGGTGGAGGACCCTCCCCTGGCGGCCAAGTGCTGGATGAGAGAGGC
ACATGAGTTATCTTATGACATCCAAGATTGTATTGACAACTTTGTGCCCCCTG---AGTCTCTTGGCTACAAATGTGACC
ACAAGATGACTCATGTTAAGATTCCCAAGAGGCTCAAGTGGCAGAAACAGATTGAATGTGCAGCTCCTGATGTGTCAGGA
CATGTTATCTCCAAAACCGTCCGTGTTGATGTAATTTGTGCTCCCAGAAGGCTCAAGTGGTACCAGCAGATCGTTGAAAA
GGTATCAGAATTTAGGATTTATGCCCAGGAGGTGGTTTGACGGTACGACAGATACCAGGTCCACTGTTGTAGTACCTCGG
TGGCAAGTAGATTTTTGGCCATTGGGCCTATGATGCCAATGCCGCCACCGCCTTGTGAGAAATCTTGTTCCGGCCTAGTA
ATTGATGGTCGGATGAGCAAGTTTATCAACTCCCAGCTGGCTAATGATGAGAATCGGTAGCTCAGGGTGGTGTCTATTCA
CGGATCTGGATGTCTTGGTAAAACAATGCTTGCCAAAGTGTTGTACAATAAAATTGGGAGGAAATTCCATTGTCGGGCTT
TCGTCCGGGTGTCCAAAAAGCCTAATATGAAGAGCCTTTTCCGTGTCATGCTATCACAATTCCAGCGGATGCAGCCCCA
>chr7D_1
GATATGGATCTACCGCCTCTCTGGCCCTGGAAGCGGCCCGA----------------TGACCTAGTCGGATTTTT--ATA
GTGGTTTTGTCTGAGAAAATAGCATTTTAGACAGCTTAATTTGCGGTTTCTAATACAATGTAAGATCTAGCCAAGACATC
AAGCGA--------GCACACCTTCCAATTATTAATAAGAATAAAAC----------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------AAGTATA
TCACACCAAACAAGCGATAAGCAGAACGCTACAAGAATCAACAAGACCAACCACGGCGACAACAAATGAACTGCGAGAGA
GAGGTTCTTCAAAACCAATGCCTAAATGAAGAGAACGACAGGGCAAAACACAAATGTCACATGATCCAAAAATTGAACAC
CAGATTATGGATTTCACCTCTAAGATTAATTACGAGAAAGCTTTCCGCCAAGGTATTTGCCCGAGAGAGGGAG-------
------------GGGAGAAAGAGGTAGTACCGTGGCAGTCCCCTTTTTTTTCTCATGTGCATGTCACATGTTGTGATGAG
AGAGAGCGTGCACATGTGAGAGCACTCGCACCATTTTGTCCTACATGCTCCATGTGCATGCCCCCAATGTGCGTGCGCCT
GGGGCAGGACCCTGGAGGCGTTCACTCGCGAGAGTCTCCTCGAATGT-AATAATCAAAGGACATACGCGTATTTTAAGTT
TCA---GTATAATACTTGAGAT-------G--------------------AAG---TACAGCTCTTTCAAATGAAGAGGA
GAT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------AAGAATCTAATGAGCTTGTCCAATCAGATTCCAGTGTTTGAAACTATGCAGTGTGAGCGGGAAAGGC
CAAGGTAATTAACAAG----------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr7A_1
GATATGGATCTACCGCCTATCTGGACCTGGAAGCGACCCC-ATGACCTGCGGTGCGGTGACCTAGTCAGATTTTTTTATA
GTGGTTTTATCTGAAAAAATAGCATTTTAGACGGCTTAGTTTGTGCTTTCTAATACAATGTAAGATCTAGCCAAGACATC
AAGCGT--------GCACACCTTCCAATTATTAATAAGAATAAAAGAAATATATCACACCAAACAAGCAATAAGCAGAAC
GCTATAAGAATCAACAACATCAACCACCGCGACAGCACATGAACTGCAAGAGAGAGGTTCTTCAAAAGCAATTCCTAAAT
AAAGAGAACGACAGGGCAAACCACAAATGTCACAGGATCCAAAATTGAACACCAGATCATGGATTTCACCTCTAAGATTA
ATTTCA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AGAAAGCTTTCCGCCAAGGTATTTGCCCAATTAAATAATAAGGTAT
TTCCGCGAGAGAGGGAGAGAGAAGTAGCACCGTGGCCCCATTA----TTTCCTCATGTGCATGCCACATGATGTGGTGAG
AGAGAGCATACACA--TGAGAGTGCTTGTGCCATTTTGTCCTATACGCTCCATATGCATGCCCCTAGTGTGCGTGCGCCT
GAGCCAGGACCCTGTCGACGTTCACTCGCAAGAGTCTACTCGAAAGT-AATAATCAAAGGACGTACGCATATTTTAAGGT
TCA---ATATAATACTTGAGAACTGAGACG--------------------AAA---TACAGCTCTTTCAAATCAAGAGCA
GAT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------AAGAATCCAATGAGCTTGGCCAATCAGATTCCAGTGTTTGAAACTATGCAGTGTGAGCGGGAGAGGC
CAAGGTAATTAACAAGACAAAGCAGTGTGAGCACCT----AGGCATAGC------------TAGTGTCCCAGGAATTAAC
AA----------GAGGC-------AGGCACGACAGTAGAGGCACAGC---CAGTGCGATGCATG---------------T
GATG---------------------------------TGACAATGTAAGGAG-------------AGAGAGAGAGAGACA
GAGGCACCACTTCTCCCCGTCCCCATTTGCTTCCGCTCTCCTCTCGCCAGAACCCTAG------TAGCCACACTCTCACT
CTCTTCGGTGATGAGGCCACCGGACATGTATGACCCCGGCGGCAGCTCGCAC------------GGCAAGCAGGAGCTGC
AGCCGGAGGTGGTTCTCTACACGGCGTC--------GGC------GTCGCGCTGCAGAGGGCGCACCTCCGCCGACCGCT
ACGCCTTGCGCGCCCTGCTGCGCGGCTACGGCCTGGCCGTGGACGAGCGTGACGTTCC----------------------
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-------------------------------------------------------------------------------
>chr4A_360
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------------------------------------------ATACGCTCCATGTGCATGTCCCCAGCATGCGTGTGACT
GGGGCAGGACCCTGTCGACGTTCACTCGCAAGAGTCTCCTCGAAAAGCAATAATCAAAGGACGTACACGTATTTTAAGTT
TCATCAATATAATAATTGAGACTAAGTACAACTCTTTCAAATGAAATAAAAAG---TACAACTCTTTCAAATGAAGAGCA
GATTTTTTTTCCGAAAAGAGGGGACATCCCTCGGCCTCATGCATCGAGTGATGCACACAATGTTTTATTTATCATATCAA
AGTTTATCATCCGACCATAACAAACTTCAACCAATAAATTGTCGCACATGACTGCCCTAAGGGTAAATTAATTTAAGAAA
CGTAGAAAAATGACCCTCATGCATCACAAATCCTACTAGCAGTCCGCCAACCAAATCGGTTGAACAAATCCCAGGAGACC
ATCTCCCATCGGTTGCACCCAAAGACCGTGAGCGCCCGATCCTCCTCCTTGCGAAGTAATGACCACACATGGATCCAGCT
GGTAGCCTTGAAGATAACCTGCAAAAAGTTGGGAACTTTCGTTCTGTTAAAAATACAATCATTACGAGTGTTTCAAATAG
CCCAAAGTATAGCATAAATTCCCACACGGATCTGAGACTTAACTTGGGATGCACCCCCACTAACCAGTTTGCAAACATAT
TCGTCCTACTCATAGGTGGAGGTAGGTTGAAAGCTATATGGACCGTTCTCCATAGCAGCTTGGCATGTGGGCATTGAAGG
AATAGATGCTGAATCAACTCCTCATTGCCACAAAAACAACACTTAGTGCATCCTTTGCCAATCTCTTTTTTACAGATTAT
CCTTTATCAGGATAAGAATCCAATAAGATTGTCTAATTAGATTCCAGTGTTTGAAACTATGCAGTGTGAGTGGGAGAGGC
CAAGGTAATTAACAAGACAAATCAGCGTGAGCACCG----AGGCAGTCGAC-AAAAGCGCATAGCGTCTGAGGAATTAAC
GGGAAAAAAAAGGAGGC-------AGGCACGACACTAGAGGCACAAC---CAGTGCGATGCATG---------------T
GATGACAGTAAAGGCACATCCAGTGCGATGCATGTGATGACAGTAGAGGCACCACTTGTT--------------------
-----------------------CATCTCCTTCCTCTCTCCTCTCGCCACAACGCTAC------TAGCCACTCTACTTCG
---------GATGAGGCCGCCGGAGATGTATGACCCGGGCGGCAGCTCGTCGTCCCGGCTGCCTGGCAAAGAGGAGCTAC
AGCCGGAGGTGGTTCTCTACACGGCGTGAGCTTCAGAGC------GTCACGCCGCAGAGCGCGCACCTCAGCCGATCTCT
ACGCCTTGCGCGCCCTGCTGCGGGGCTACGACCTGACCATGGACGAGCGCGACGTGTCCAGGAGTAAAGCGCACCGCTGC
AAGCTCAAGTCGTTACTCGCAGCTCGAGGCTGCCCCTTCTGCCTCCAGCAGCTCCTCGTCGGCTGCC-------------
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-------------------------------------------------------------------------------
>chr7D_428
AGAGTTCTCCTCGG------------------------------------------------------------------
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--------------------------------------------AAGAAATAATCAAAGGGTGTATGTGTGATTTAAGTT
TCT---TTAAAATATTTAACAAAGTACTAC-----------------------TACTCCTCCTCTTTCAAATCCAGAGCA
GAT-----------------------------------------------------------------------------
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-------------AAGAATCCAATGAGACTGTCCAATCTGATTCCAGTGTTTGAAACTAAGCAGCGTACGTGAGCGGGTG
AGGCACCATCGGGA----------------------------GCAATCGACAAAAGATGCATAGCGTCCCAGGAATTAAC
AA----------GAGGC-------AGGCTCGACAGTAGAGGCACAAGCCACAGTGCCATGCATG---------------T
GATG---------------------------------TGACAGTAGAGGAGATGAACCACAACTAAGTGAGAGAGAGACG
CATGTGA----TGTCCCCGTCTCCATCTGCTTCCCCTCTCCTCTCACTCCGTCCAAACACTAGCTAGCTACACTCT----
-TCTTCGGTGATGAGGCCACCGGACATGGATGACCCCGGCGCCAGCTCGCAC------------GCCAAGGAGGAGCTGC
AGCCGGAGGTGGTTATCTACACGGCGTC--------AGCTTCAGCGTCGCGCCGCAGAGCGCGCACCTCGGCCGACCTCT
ACGCCTTGCGCGCCCTACTACGGGGCTACGGCCTGACCACAGACGAGCGCGACGTGTCCACGAGCAAAGCGCACCGCTGC
GAGCTCAAGTCGTTGCTCGCAGCTCGGGGCTGCGCCTTCTCCCTCCCGCAGCTCCTCGTGGGCGGCCGGCTCGTCGGCGG
CCCCAAAGATGTTAGGCAGCTGCACCAGGCCGGCGGGCTGAGGCCTCTCCTCGACGACGCCCCAAGGCCGAGC-C-C-GC
CTTCGTCTGCCAAGCCTGTAAGAGGGTCGGCTCCGTTCCCTGCAGGAAGTGCAGGAACACCCG---CAACAAGATGCAAG
ATCATGGCGTTATTGCCGACGAGCAGG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---ACAAGGTTGTCCTTTTTTATCCAACCCAAGGTGACACTTCGCTTCTCTCCTTCCTAAT-----------TCCTATCC
CTCTACAACAAAAAGAAATCAAAGAGACTGAACTTGCTTAGAGAGCCG--------------------TTTCCTTTTCTT
TATGCTGACATAACTCGATCTTGTTGCGCTATAGGCAGTATTACTTATATCTAAAATAAAGTAGGCGCAGCTCATTTCTT
CTGTTAGTTTGTATTACATGCAACATCTGCTTGTGTGTAAAATAAATTGTTCTTTCTTGTCTATGTTTCTTTTCAGATGT
TTCAGTGGGAGGTAGAGGCAGAGAGATGGATGCGAGTTTCAGTGTTTCTCTGGGCGCCATGAGACCCCTTCTTAAGAAGC
TTGACATGATGCTAGGTCCTCATGGATGCAAGTTGACCAAGGGGGTCAATGATAGGTGTCAGCTCCTCAAAGATGAACTT
GAAGAAATAGCCACATACCTTGAAGATCTGTTAAAGGTGGAGGACCCTCCCCTGGCGGCCAAGTGCTGGATGAAAGAGGC
ACATGAGTTATCTTATGACATCCTAGATTGTATTGACAACTTTGTGCCCCCTGATCAGTCTCTTGGCTACAAATTTGACC
ATAACATGACTCATGTTAAGATTCCCAAGAGGCTCAAGTGGCAGAAACAGATTGAATATGCAGCTCCTGATGTGTCAGGA
CATGTTATCTCCAAAACCATCCGTGTTGATGTAACTTGTGCTCCCAAGAGGCTCAAGTGGTACCAGCAGATCGTTGAAAA
GGTATCAGAATTTAGGATTTATGCCCAGGAGGTGGTTCGACGGTACGACAGATACCAGGTCCACTGTTGTAGCACCTCGG
TGGCAAGTAGATTTTCGGCCATTGGGCCTATGATGCCAATGCCGCCACCGCCTTGTGAGAAAACTTGTTCCGGCCTAGTA
ATTGATGGTCGGATGAGTAAGTTTATCAACTCCCAGCTGGCTAATGATGAGAATCGGCAGCTCAGGGTGGTGTCTATTCA
CGGATCTGGATGTCTTGGTAAAACAATGCTTGCCAAAGTGTTGTATAATAAATTGGGGAGGCAATTCCATTGTCGGGCTT
TCATCCGGGTGTCCAAAAAGCCTGATATGAAAAGACTTTTCTGCGACATGCTCTCACAAATCCAGCGAAAGCATCCCCA
>chr7A_863
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----------------------------------CCCGGCCGCATC-CGCAC------------GGCAAGGAGGAGCTGC
AGCCGGAGGTATTTCTCTACACGGCGTC--------AGCTTCAGCATCGCGCCGCAGAGGGCGCACCTCCGCCGACCGCT
ACGCCTTGTGCGCCCTGCTGCGCGGCTACGGCCTGGCCGTGGACGTGCGCGACGTGTCCAGGAGCAAAGCGCACCGCAGC
GATCTCAAGTCGTTGCTCGCGGCTCGGGGCTGCGCCTTCTCCCTCCCGCAGCTCCTCGTGGGCGGCCGGCTCGTCGGTGG
CCCTGACGATGTCAGGCAGCTGCACCAGGCCGGTGGGCTGCGGCCTCTCCTCAACGCCGCCCCAAGGCCGAGC-CGC-GC
CTTCGTCTGCCAAGCCTGTAAGACGGTCGGCTCCGAGCCGTGCCCAAAGTGCAGGGAATCTCG---CAACAAGATGCTGG
ATCATGGCATTACTGAGGAGGCGGAGG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---AGAGGGTCGTCCTTTTCTATCCAACCCAAGGTGACACTTCCTTTATCTCCTTCCT----------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr4A_876
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-----------------------------------------------CGCGC------------GGCAAGGAGGAGCTGC
AACCGGAGGTGGTTCTCTACACGGCGTC--------AGCTTCGGCGTCGCGCCGCCGAGGGCGCACCACCGCCGACCTCT
ACGCCTTGCGCGCCCTGCTGCGGGGCTACGGCCTGACCATGGACGAGCGCGACGTGTCCACGAGCAAAGCGCACTGCTGC
GAGCTCAAGTCGTTGCTTGCGGCTCGCGGCTGCGCCTTCTCCCTCCCGCAGCTCCTCATCGGCGGCCGGCTCGTGGGCGG
CCCTGACGATGTTAGGCAGCTGCACCAGGCTGGCGGGCTGCGGCCTCTCGTCGACGGCGCCCCAAGGCCGCGC-CGC-GC
CTTGGTCTGCCAAGCCTGTAAGAGGGTCGGCTCCGAGCCCTGTCCAAAGTGCAGCGAGTCCCG---CAACAAGATGCTGG
ATCATGGCATTACGGAGGAGGAGGAGG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---AGAAGGTTGTCATCTTTTATCCAACCCAAGGTGACACTTCGCTTCTCTCCTTAGGGAGCCGT---------------
-------------------------------------TTAGGGAGCCG--------------------TTTCCTTTTCTT
GACACTGACATAACTCGTG---------------------TTACTTATATCTAAAATAAAGTAGGCGCAGCTGATTTCTT
CTGTTAGTTTGTATTACATGCAACATCTGCT--TGTGTAAATTAAATCGTTCTTTTTTGTCTATGTTTCATTTCAGATGT
TTCAGTGGGAGGTAAAGGCAGAGAGATGGATGCGAGTTTCAGTGTTTCTCTGGGCGCCATGAGACCCCTTCTTAAGAAGC
TTGACATGATGCTAGGTCCTCATGGATGCAAGCTAACCAAGGGGGTCAATGATAGGTCTCAGCTCCTCAAAGATGATCTT
AAAGAAATAGCCACATACCTTGAAGATCTGTTTGAGGTGGAGGACCCTCCCCTGGCGGCCAAGTGCTGGATGAAAGAGGC
ACATGAGTTATCTTATGACATCCTAGATTGTATTGACAACTTTGTGCCCCCTGATCAGTCTCTTGGCTACAAATTTGACC
ACAACATCACTCATGTTAAGATTCCCAAGAGGCTCAAGTGGCAGAAACAAATTCAATATGCAGCTCCTGATGTGTCAGGA
CATGTTATCTCCAAAACCATCCGTGTTGATGTAATTTGTGCTCCCAGGAGGCTCAAGTGGTACCAGCAGATCGTTGAAAA
GGTATCAGAATTTAGGATTTATGCCCAGGAGGTGGTTCGACGGTACGATAGATACCAGGTCCACTGTTGTAGCACCTCGG
TGGCAAGTAGATTTTCAGCCATTGGGCCTATGATGCCAATGCCGCCACCGCCTTGTGAGAAAACTTGTTCCGGCCTAGTA
ATTGATGGTCGGATGAGCAAGTTTATCAATTCCCAGCTGGCTAATGATGAGAATCGGCAGCTAAGGGTGGTGTCCATTCA
CGGATCTGGATGTCTTGGTAAAACAATGCTTGCCAAAGTGTTGTATAATAAGTTGGGGAGGCAATTCCATTGTCGGGCTT
TCATCCAGGTGTCCAAAAAGCCTGATATGAAAAGACTTTTCCGCGACATGCTCTCACAAATCCAG--------------
>chr4A_876
--------------------------------------------------------------------------------
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-----------------------------------------------CGCGC------------GCCAAGGAGGAGATGC
AGCCAGAGGTGGTTCTCTACACGGCG--------------TCGGCGTCGCGCCGCAGGGGTCGCACCTCCACCAACCTCT
ACGCCCTGCGCGCCCTGCTGCGGGGCTACGGCCTGACCATGTACGAGCGCGACGTGTCCAGGAGCAAAGCGCATCGCTGC
GAGCTCAAGTCGTTGCTTGCGGCTCGGGGCTGCGCCTTCTCCCTCCCGCAGCTCCTCGTCGGTGGCCGGCTCGTTGGCTG
CCCTGACGATGTTAGGAAGCTGCACCGGGCTGGCGGGCTGCGGCCTCTCCTCGACGGCGCCCCAAGGCCGTACGC-C-GC
CTTCGTCTGCCAAGCCTGTAAGAGGGTTGGCTCCGAGCCCTGCCCACAGTGCAGCGAGTCCCGCAACAACAAGATGCTGG
ATCATGGCATTATTGCCGACGAGCAGGACACAGTTGTCCTTTTTTATCCAACCCAAGGTGACACTTTTTTTCTCTCCTTC
CTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GACACGACAGGTAGGCTCAGCTTAGGCAGAAAATTTCCTTCTATACCCAAGGCCGTACGCCGCCTTGGTCTGCCGAGCCT
GTAAGAGGGTCGTCCTTTTTTATCCAACCCAAGGTGACACTTCGCTTCTCTCCTTCTTACCCTTTCTTATGATGCTT---
-----------------------------------------AGAGCCG--------------------TTTCCTTTTCTT
GATGCTGACATAACTTGAT-------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr4A_1445
--------------------------------------------------------------------------------
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-----------------------------CT--TGTGTAAACTAAATCATTCTTTCTTGTCTATGTTTCTTTTCAGAAGT
TTCAGTGGGAGATAGAGGCAGAGAGATGGGTGCTAGTTTCAGTGTTTCTCTGGGCGGCATGAGACCCCTTCTTAAGAAGC
TTGACATGATGCTAGGTCCTCATGGATGCAAGCTGACCAAGGGGGTCAATGATAGGTGTCAGCTCCTCAAAGATGATCTT
GAAGAAATAGCCACATACCTTGAAGATCTGTTAGAGGTGGAGGACCCTCCCCTGGCGGCCAAGTGCTGGATGAAAGAGGC
ACATGAGTTATCTTATGACATCCTAGATTGTATTGACAACTTTGTGCCCCCTCACCAGTCTCTTGGCTACAAATTTGACC
ACAACATGACTCATGTTAAGATTCCCAAGAGGCTCAAGTGGCAGAAACAGATTCAATATGCAGCTCCTGATGTGTCAGGA
CATGTTATCTCCAAAACCATCCGTTTTGATGTAATTTGTGCTCCCAGGAGGCTCAAGTGGTACCAACAGATCGTTGAAAA
GGTATCAGAATTTAGGATTTATGCCCAGGAGGTGGTTCGACGGTACGACAGATACCAGGTCCACTGTTGTAGCACCTCGG
TGGCAAGTAGATTTTCGGCCATTGGGCCTATGATGCCAATGCCGCCACCGCCTTGTGAGAAAACTTGTTCCGGCCTAGTA
ATTGATGGTCGGATGAGCAAGTTTATCAACTCCCAGCTGGCTAATGATGAGAATCGGCAGCTCAGGGTGGTGTCTATTCA
CGGATCTAGATGTCTTGGTAAAACAATGCTTGCCAAAGTGTTGTATAATAAATTGGGGAGACAATTCCATTGTCGGGCTT
TCATCCGGGTGTCCAAAAAGCCTGATATGAAAAGGCTTTTCCGCGACATGCTCTCACAAATCCAGCGAAAGCATCCCCA
>chr4A_1445
--------------------------------------------------------------------------------
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-----------------------------CT--TGTGTAAACTAAATCATTCTTCCTTGTCTATGTTTCTTTTTAGATGT
TTCAGCGGGAGGTAGAGGCAGAGAGATGGATGCGGGTTTCAGTGTTTCTCTGGGCGCCATGAGACCCCTTCTTAAGAAGC
TTGACATGATGCTAGGTCCTCATGGATGCAAGCTGAGCAAGGGGGTCAATGATAGGTCGCAGCTCCTCAAAGATGATCTT
GAAGAAATAGCCACATACCTTGAAGATCTGTTAGAGGTGGAGGACCCTCCCCTGGCGGCCAAGTGCTGGATGAAACAGGC
ACATGAGTTATCTTATGACATCCTAGATTGTATTGACAACTTTGTGCCCCCTGATCAGTCTCTTGGCTACAAATTTGACC
ACAACATGACTCATGTTAAGATTCCCAAGAGGCTCAAGTGGCAGAAACAGATTGAATATGCAGCTCCTGATGTGTCAGGA
CATGTAATCTCCAAAATCATCCGTGTTGATGTAATTTGTGCTCCCAGGAGGCTCAAGTGGTACCAGCAGATTGTTGAAAA
GGTATCAGAATTCAGGATTTATGCCCAGGAGGTGGTTCGACGGTATGACAGATACCAGGTCCACTGTTGTAGCACCTCGG
TGGCAAGTAGATTTTCGGCCATTGGGCCTATGATGCCAATGCCGCCACCGCCTTGTGAGAAAACTTGTTCCGGCCTAGTA
ATTGATGGTCGGATGAGCAAGTTTATCAACTCCCAGCTGGCTAATGATGAGAATCGGCAGTTCAGGGTGGTGTCTATTCA
CGGATCTGGATGTCTTGGTAAAACAATGCTTGCCAAAGTGTTGTATAATAAATTGGGGAGGCAATTCCATTACCGGGCTT
TCATCCGGGTGTCCAAAAAGCCTGATATGAAAAGGCTTTTCCGCGACATGCTCTCACAAATCCAGCGAAAGCATCCCCA
>chr4A_1446
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------------------------------T--TGTATAAATTAAATCGTTCTTTCTTGTCTATGTTTCTTTTCAGATGT
TTCAATGGGAGGTAGAGGCAGAGAGGTGGATACCAGTTTCAGTGTTTCTCTGGGCGCCATGAGACCCCTTCTTAAGAAGC
TTGACATGATGCTAGGTCCTCATGGATGCAAGCTGACCAAGGGGGTCAATGATAGGTTGCAACTCCTCCAAGATGATCTT
GAAGAAATAGCCGCATACCTTGAAGATCTGTTAGAGGTGGAGGACCCTCCCCTGGCAGCCAAGTGCTGGATGAAAGAGGC
ACATGAGTTATCTTATGACATCCTAGATTGTATTGACAACTTTGTGCCCCCTAATCAGTCTCTTGGCTACAAATCTGACC
ACAAGATGACTCATGTTAAGATTCCAAAGAGGCTCAAGTGGAAGAAACAGATTGAATATGCAGCTCTTGATGTGTCAGGA
CATGTTATCTACAAAACCATCCGTGTTGATGTAATTTGTGCTCCCAGGAGGCTCAAGTGGTACCAGCAGATCATTGAAAA
GGTATCAGAATTCAGGATTTATGCCCAGGAGGTGGTTCAACGGTATGACAGATACCAGGTCCACTACTGTAGCACCTCGG
TGGCAAGTAGATTTTCGGGCATTGGGCCTATGATGCCAATGCCGCCACCGCCTTGTGAGAAAACTTGTTCCAGCCTAGTA
ATTGATGGTCGGATGAGCAAGTTTATCAACTCCCAGCTGGCTAATGATGAGAATCAGCAGCTCGGGGTGGTGTCTATTCA
CGGATATGGATGTCTTGGTAAAACAATGCTTGCCAAAGTGTTGTATAATAAATTGGGGAGGCAATTCCATTGTCGGGCTT
TCATCCGGGTGTCCAAAAAGCCTGATATGAAAAGGCTTTTCCGCGACATGCTCTCACAAATCCAGCGGAAGCATCCCCA
>chr4A_1446
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------------------------------T--TGTATAAATTAAATCGTTCTTTCTCGTCTATGTTTCTTTTCAGATGT
TTCAATGGGAGGTAGAGGCAGAGAGGTGGATACCAGTTTCAGTGTTTCTCTGGGCGCCATGAGACCCCTTCTTAAGAAGC
TTGACATGATGCTAGGTCCTCATGGATGCAAGCTGACCAAGGGGGTCAATGATAGGTCGCAACTCCTCCAAGATGATCTT
GAAGAAATAGCCGCATACCTTGAAGATCTCTTAGAGGTGGAGGACCCTCCCTTGGCAGCCAAGTGTTGGATGAAAGAGGC
ACATGAGTTATCTTATGACATCCTAGATTGTATTGACAACTTTGTGCCCCCTGATCAGTCTCTTGGCTACAAATCTGACC
ACAAGATGACTCATGTTAAGATTTCAAAGAGGCTCAAGTGGCAGAAACAGATTGAATATGCAGCTCTTGATGTGTCAGGA
CATGTAATCTCCAAAACCATCCGTGTTGATGTAATTTGTGCTCCCAGGAGGCTCAAGTGGTACCAGCAGATTGTTGAAAA
GGTATCAGAATTCAGGATTTATGCCCAGGAGGTGGTTCGACGGTATGACAGATACCAGGTCCACTGTTATAGCACCTCGG
TGGCAAGTAGATTTTCGGCCATTGGGCCTATGATGCCAATGCCGCCACAGCCTTGTGAGAAAACTTGTTCCGGACTAGTA
ATTGATGGTCGGATGAGCAAGTTTATCAACTCCCAGCTGGCTAATGATGAGAATCGGCAGCTCAGGGTGGTGTCTATTCA
CGGATCTGGATGTCTTGGTAAAACAATGCTTGCCAAAGTGTTGTATAATAAATTGGGGAGGCAATTCCATTAGCGGGCTT
TCATCCGGGTGTCCAAAACGCCTGATATGAAAAGGCTTTTCCGCGACATGCTCTCACAAATCCAGCGAAAGCATCCCCA
>chr4A_1446
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------------------------------T--TGTATAAATTAAATCGTTCTTTCTTGTCTATGTTTCTTTTCAGATGT
TCCAATGGGAGGTAGAGGCAGAGAGGTGGATACCAGTTTCAGTGTTTCTCTGGGCGCCATGAGACCCCTTCTTAAGAAGC
TTGACATGATGCTAGGTCCTCATGGATGCAAGCTGACCAAGGGGGTCAATGATAGGTCGCAACTCCTCCAAGATGATCTT
GAAGAAATAGCCGCATACCTTGAAGATCTGTTAGAGGTGGAGGACCCTCCCCTGGCAGCCAAGTGCTGGATGAAAGAGGC
ACATGAGTTATCTTATGACATCCTAGATTGTATTGACAACTTTGTGCCCCCTAATCAGTCTCTTGGCTACAAATCTGACC
ACAAGATAACTCATGTTAAGATTCCAAAGAGGCTCAAGTGGAAGAAACAGATTGAATATGCAGCTCTTGATGTGTCAGGA
CATGTTATCTACAAAACCATCTGTGTTGATGTAATTTGTGCTCCCAGGAAGCTCAAGTGGTACCAGCAGATCATTGAAAA
GGTATCAGAATTCAGGATTTATGCCCAGGAGGTGGTTCAACGGTATGACAGATACCAGGTCCACTACTGTAGCACCTCGG
TGGCAAGTAGATTTTCGGGCATTGGGCCTATGATGCCAATGCCGCCACCGCCTTGTGAGAAAACTTGTTCCAGCCTAGTA
ATTGATGGTCAGATGAGCAAGTTTATCAACTCCCAGCTGGCTAATGATGAGAATCAGCAGCTCGGGGTGGTGTCTATTCA
CGGATATGGATGTCTTGGTAAAACAATGCTTGCCAAAGTGTTGTATAATAAATTGGGGAGGCAATTCCATTGTCGGGCTT
TCATCCGGGTGTCCAAAAAGCCTGATATGAAAAGGCTTTTCCGCGACATGCTCTCACAAATCCAGCAGAAGCATCCCCA
>chr7D_1446
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------------------------------T--TGTATAAATTAAATCGTTCTTCCTCGTCTATGTTTCTTTTCAGATAT
TTCAATGGGAGGTAGAGGCAGAGAGATGGATGCCAGTTTCAGTGTTTCTCTTGGCGCCATGAGCCCCCTTCTTAAGAAGC
TTGACATGATGCTAGGTCCTCATGGATGCAAGCTGACCAAGGGGGTCAATGATAGGTCGCAGCTCCTCAAAGATGATCTT
GAAGAAATAGCCGCATACCTTGAAGATCTGTTAGAGGTGGAGGACCCTCCCATGACGGCCAAGTGCTGGATGAAAGAAGC
ACGGGAGTTATCTTATGACATCCAAGATTGCATTGACAACTTTGTGCCCCCTGA---GTCTCTTGTCTACAAATCTGACC
AGAAGATGACTCATGTTAAGATTCCCAAGAGACTCAAGTGGCAGAAACAGATTGAATATGCAGCTCCTGATGTGTCAGGA
CATGTTATCTCCAAAATCATTCGTGTTGATGTCATTCGTGCTCCCAGGAAGCTCAAGTGGTACCAGCAGATGGTTGAAAA
GGTATCAGAATTCAGGATCTATGCCCGGGAGGTGATCCGACGGTACGAGAGGTACCAGCTGCATTGTTGTAGCACCTCGG
CGGCACGTAGATTTTCAGCCATTGGGCCTATAATGCCAATGCCGCCACTGCCTTGTGAGAAAACTTGTTCCGGCCTAGTA
ATTGATGGTCGGATGAGCAAGTTTATCAACTCT---CTGGCTAACGACGCGGATCAGCAGCTCAAGGTGGTGTCTATTTA
TGGATCTGGATGTCTTGGTAAAACAATGCTTGCCAAAGTGTTGTACAATAAAATTGGGAGGCAATTCCATTGCCGGGCTT
TCATCCGGGTGTCCAAAAAGCCTGATATGAAGAGGCTTTTCCGTGACATCCTGTCACAAATCGAGCGGAAGCAGCCCCA
>chr7D_1451
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-------------------------------------TAAATTAAATCATTCTTTCTCGTCTATGTTTCTTTTCAGATGT
TTCAATGGGAGGTAGAGGCAGAGAGATGGATGCCAGTTTCGGTGTTTCTCTGGGCGCCATGAGACCTCTTCTTAAGAAGC
TTGACATGATGCTAGGTCCTCATGGATGCAAGCTGACCAAGGGGGTCAATGATAGGTCGCAGCTCCTCAAAGATGATCTT
GAAGAAATAGGTGCATACCTTGAAGATCTGTTAGAGGTGGAGGACCCTCCCCTAGCGGCCAAGTGCTGGATGAAAGAGGC
ACATGAGTTATCTTATGACATCCTAGATTGTATTGATAACTTTGTGCCCCCTGA---GTCGCTTGGCTACAAATATGAGC
ACAAGATTACTCATGTTAAGATTCCCAAGAGGCTCAAGTGGCAGAAACAGATTGAATATGCAGCTCCTGATGTGTCAGGA
CATGTTATCTCCAAAATCATTCGTGTTGATGTCATTCGTGCTCCCAGGAAGCTCAAGTTGTACCAGCAGATGGTTGAAAA
GGTATCAGAATTCAGGATCTATGCCCGGGAGGCGATCCGACGGTACGAGAGGTACCAGCTCCATTCTTGTAGCACCTCGG
CGGCACGTAGATTTTCAGCCATTGGGCCTATAATGCCAATGCCGCCAATGCCTTGTGAGAAAACTTGTTCCGGCCTAGTA
ATTGATGATCGGATGAGCAAGTTTATTAACTCT---CTGGCTAATGACGCGGATCAGCAGCTCAAGGTGGTGTCTATTCA
TGGATTTGGATGTCTTGGTAAAACAATGCTTGCCAAAGTGTTGTACAATAAAATTGGGAGGAAATTCCATTGCCGGGCTT
TCGTCCGGGTGTCCAAAAAGCCTGATATGAAGAGGCTTTTCCACGACATGCTATCACAATTACATCGGAAGCAGCCCCA
>SNPs
-----------------------------------S----S-----------S----------------------S----
--SS----------------------------------------------------------------------------
------SSSSSSSS--------S---------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------S----S------------------S-----------S
---------------------------------------------------------------S-------S--------
-S---S-------------------------------------------------S---S--S--------------S--
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
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----------------------------------S---S----------------------S-S----------------
-----------------------S------------SSSS--------------S----------S-S------------
-------------SS-SSSSSSSS----------------------------------------SSSSSSSSSSSSSSS-
--------------------------------------------------------------------------------
------S------------------SSSS---------------------------------------------------
------------------------------------------S-------------------------------------
-----------S---------------------------------------------------SS---------------
--------------------S--------------------S-------------------S----S-------------
--------------------S---------------------------------------------------S-------
---------------------------------------------S-------------------------------S--
------------------S---------------------------S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
---------------------------------------------S-SSSSSSSSSSSSSSSSSSSSS------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S------------------------------------------S------
--------------------------------------------------------------------------S-----
---------------------------------------------------------S----------------------
------------------S----------------------------S--------------------------------
-------------------------------------S----------------------------------S-------
---------------S----------------------------------------------S-----------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
-----------------------S----------S----------S-----------------------S---------
>forward_684
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------------------------TAGTACCGTGGCAGTCCTCA------------------------------------
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-------------------------------------------------------------------------------
>reverse_3488
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-----------------------------------------------AAGGCTCAAGTGGTACCAGC-------------
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-------------------------------------------------------------------------------
