>input_sequence_82403
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--------------------------------------------------------ATGGAACCACGTCACCCCGAGCTC
GAGGAGTCCAGCACTGCCACCGTGGACGAGGTGCTAAAGCCGGTGGAGGCGCCATCGGACGGTGAAGAATGCCCCATATG
CTTGGATCAAGAGAGGGTAACGACCGCGTGGAAGGAGACAGTGTGTGGGCACATCTTTCATGAGCAATGCGTGGAGAGGT
GGCTCGAGACGAAGGGGAGTTGTCCCATGTGTCGGCGTCAGCTTCAAGAACCATGTGATGCTGCAAAATATGGTATTCGT
---CGTAGTCCCCTCATCATGATGGCGGTGGAAGTAATGGACAACTCCGACCTTCCAGATCGAAGTAACTACTTTAGGCA
ATATAGGCAGGAGACGTTTGTAGG------GTGA----------------------------------------------
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-------------------------------------------------------------------
>chr3A_1_TraesCS3A01G309400
CATCCTCCACT---------------------------------------------------------------------
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------------------------------------------------------TAATTTTTCTACCGCGCGCAGGTTTT
CACCTCCACACCGGGATGGATAGTCGGTTACGGCCATGGGGTCCACCCCGCCAGCCTGGCACCTGGCAGCCGGCTACTTC
GCTTAACGACAAGAACACCGGGACGGGACGACACGGGA-----------------GACGCCGCCGGAAAAG-TTTTCGAC
ACAACAACCACCGCGCGCGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAT-----------GGCTTCTGCGCTG
CCGTGGAAGCCTCTCTTCTGGGAGCGCGTCGAGAATTCTCGTGCCCTCGCCGCCGCCGCCCGCGGCGACCTCGCCGCCGC
CGCCGCCGCCGCCGCCACCATCCACCTCGCACTCGCATCGCCTCTGCGCGCCGGTGACCTCGATCGCGCCGTCTCGCTGA
TTGGAGAGTCAGAGGACAAGCTTGCCGCGGCGGGCAAGCAGGTTGCCTTCCTGTTTTCCGGCCTTGGCACCGTCGAGCTC
CTCGCGCGCCGACGGATCCGCGGCGACGACTCTGTGGAGCAGCAGGCCCGACCGAGGGCGCGCGAGGCCAGGGCACGGGC
CGGCGCCGCCTACGACGACGTGGCTCTCTCTCGCGGCCACCTGGGAGCCGCGGCACGTCTGGTTGCCTGCGGCGACCTCC
CCGACATCTACTTCCGCGCCGAGTTTCTCGCCGCCAC-AGAGCCGCGGCGGCGGCCTCGGAGCACCTCCACGGGGTGGAC
GACACCCTGCGCATCCGCCGCGACCTCGCGCCTCCACTTCTTCCCCTGCACCGGAGCGTCCACCCCCACACGCGCT---C
---------GGCGGCGCACCCCAGCGCCAAGCGGGAGGAAGAACACGACAAGGCGTGGAAGGCCCTGGCATGCTCCGCTC
CAGCGTCCAGCCGCGCTGCTACACGGATGCGCCGACCTC-----------------------------GGTAAGTGCGTC
AACGCCGTGATGTCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------TCTGC
CGTTTGGGAACTC--CCGTAGCGCCGTGTTTTTGTAGCGTGGAGATTGCTTCTGCCATGGAACCACGTCACCCCGAGCTC
GAGGAGTCCAGCACTGCCACCGTGGACGAGGTGCTAAAGCCGGTGGAGGCGCCATCGGACGGTGAAGAATGCCCCATATG
CTTGGATCAAGAGAGGGTAACGACCGCGTGGAAGGAGACAGTGTGTGGGCACATCTTTCATGAGCAATGCGTGGAGAGGT
GGCTCGAGACGAAGGGGAGTTGTCCCATGTGTCGGCGTCAGCTTCAAGAACCATGTGATGCTGCAAAATATGGTATTCGT
---CGTAGTCCCCTCATCATGATGGCGGTGGAAGTAATGGACAACTCCGACCTTCCAGATCGAAGTAACTACTTTAGGCA
ATATAGGCAGGAGACGTTTGTAGGGTGACAGTGATGAGACAATGTCGACATATGCAACG---------------------
-------------ATTTGTGTACTTTATTGTAGCTGTACGTGTGAGAACATCACTAGGACATTCATATATTTGATCATA-
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TGAATATTCTCTCTATCAAACAAATAAACATTGTGCGGCTCAGGTTGGTAATGATTGCTCAAGACCCTCTCATGGTTACT
GTTGTGTTGCGGCAAGCTTAATGCTCTTGGTGTTGTCTTGACTCATCTTTGCTCAAGGATGGCGCGAGATGCCTCTCAAG
GTGCTATTCGTTCCGTTTTTCTGTGGCGGAGCCCCAGTCAAGATTCGTGTCT-GGATGACACTCGTTGATTGTGGATGCT
CCTGAGTTGTGCCATGGGGCCGGTATGCCCGCCGATGCGTTCGGCTGTTTGCAAAGTCCTGGTATTGTGATCTCTCGACG
ACACCCCACATCTACTTGTGTCTCTCATGGTGATGGTCTTATGTCTGCCAGCTAGGCCGTGCCTTGTACGATTTTCGGCG
CGGTTTCCCTTATAAACAGGGTTAATTTGTTTAAGGTTTTTGATCCGGTTTTTCTTATAAATTGGATCACCACTCTGGCA
TTTTTGCCACTTTGAGTAATATATTCAAGTGGGGAAACTCCCCCTCCCCCCCCCTATTCTTAAAAAATAAAAATAAACAT
ATATAGTACGTGTATCCATTCGTTAAAGCAGGGCAAGCGCCTTTTTCTAAAAAT--GTTTAACATGAGATTGTAAGAAGA
ACTCTGCAACTATATTTGTCAAAACAAATGGTTGCAATTTGAACTATGACTGATAATATCTCATATATTAGAATGGTTTG
TCTTTTCAGGTTTTCTCTTGAAACGGGCTCTCGCTCCACTTTATAAATAAGGCACAAGCCAATGGC--------------
--------------------------------------------------------------------------------
-------------------CTGAATATAATGAGACGACACACATTAGGATACCTAAGCTCCACGACACC--------AAG
TGGAAAGGACGCAGAGCATCACCCGCTATCGACTCCAAGACAGACGAGGGTCTTCACTCGGAACCCT
>chr3A_7
------CCACC---------------------------------------------------------------------
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------------------------------------------------------TAA-TTTTCTACCGCGCGCAGGTTTT
CACCTCGACGCCGGGATGGATAGTCGGTTACGGCCATGGGGTCCACCCCGCCAGCCTGGCACCTGGCAGCCGGCTACTTC
GCTTAACGACAAGAACACCGGG----------ACGGGA-----------------GACGCCGCCGGAAAGTTTTCGCAAC
AGAAGAACCACCACGGTCCACGCGCGCC----------AGAGAGAGAGAGAGAGAT-----------GGCTTCTGCGCTG
CCGTGGAAGCCTCTCTTCTGGGAGCGCTTCGAGGATTCGCGTGCCCTCGCCGCCGCTGCCCGCGGCGACCTCGCCACCGC
CACCGCC---------ACCTTCGACCTCGCACTCGCATCGCCTCTGCGCGGCGGTGACGCCGATCGCGCTGTCTCGCTGA
TCGGAGAGTCGGAGGGCAAGCTTGCCTCGGCGGGCAAGCAGCTTGCCATCCTGCTCACAGGCCTTGGGACCGTCGAGCTC
CTCGCGCGCCGGCGTATGCGCGGCGACGACTCTGTGGAGCAGCAGGCCCGACCGAGGGTGCGCGAGGCCAGGGCACGGGC
CGGCACCGCCTACGACGACGTGGCTCTCTCTCGCGGCCACCTGGGAGCCGCGGCACGTCTGGTTGCCTGCGGCGACCTCC
CTGACATCTACTTCCGAGCCGAGTTTCTCGCCGCCACCAGAGCCGCGGCGGCGGCCTCGGAGCACCTCCACGGGGTGGAC
GACGCCCTGCGCATCCGCGGCGACCTCGCGCCTCCCCATCGTCCCCTGCACCGCAGCGCCCACTCCAACACGCGCCCAGC
GGCGGCGGCCTCGGAGCACCCCAGCGCCAAGCGGGAGGAGGTACACGACAAGGCGTGGAAGGCCCTGGCGTGCTCCGCTC
CAG--------CGCGCTGCTGCGCGGATGCGCCGACCTC-----------------------------------------
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>chr3B_7
------CCACC---------------------------------------------------------------------
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------------------------------------------------------TAATTTTTCTACCGCGCGCAGGTTTT
CACCTGGACGCCGGGATGGATAGTCGGTTACGGCCATGGGGTCCACCCAGCCAGCCTGGTACCTGGCAGCCGGCTACTTC
GGTTAACCCAATAG-----------------CACGGGA-----------------GACGCCGCCGGAAAGTTTTCGCAAC
AGAAGAACCACCGCGCGCGCC-------------------------AGAGAGAGAGAGAGAGATGGCGGCTTCTGCGCTG
CCGTGGAAGCCTCTTTTCTGGGAGCGCTTCGAGGATTCGCGTGCCCTCGCCGCCGCCGCCCGCGGCGACCTCGCCGCTGC
CACCGCC---------ACCATCGGCATCGCACTCGCATCGCCTCTGCGCGGTGGTGACGTCGACCGCGCTCTCTCGCTGA
TTGGAGAGTCGGCGGACAAGCTTGCCATGGCGAGCAAGCATCTTGCCATCCTGCTTTCCGGCCTTGGGACCGTCGAGCTC
CTCGCGCGCCGACGGATCCGCGGCGACGACTCACTAGAGCAGCAGGCCCGACCGAGGGCGCGCGAGGCCAGGGCACGGGC
CGGCGCCGCCTACGACGACGTGGCTCTCTCTCGCGGCCACCTGGGAGCCGCGGCACGTCTGGTTGCCTGCGGCGACCTCC
CCGACATCCACTTCGGCGCCGAGTTTCTCGCCGCCACCAGAGCCGCGGCGGCGGCCTCGGAGCACCTCCGCGGGGTGGAC
GACGCCCTGCGCATCCGCGACGACCTCGCGCCTCCCCTTCGCCCCCTGCACCGCAGCGTCCACCCCGACACGCGC-----
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-------------------------------------------------------------------
>chr3B_7
TCAGCCGTCTAGGAACTCGCCGTATTGCCATGTTTTGGTAGCGTGGAGAGTGCTTCTGCCATGGAACCACGTCAGCCCGA
GCTCGAGGAATCCCGCACTGCCACCGCGGCGGACGGGGTGTTAAAGCCGGTGGAGGCGCCATCGGACGGTGAAGGATGCC
CCATATGTTTGGATCAAGAGGGAGCAACGACCGCGTGGAAGGAGACCGTGTGTGGGCACATCTTTCATGGAGGATGCGTG
GAGAGGTGGCTCCAGGTGAAGGGAAGTTGCCCCGTGTGCCTGCGACAGCTTCAACAACCACGTGCTCCTACCAAACCAGA
TGTTCGATATCATAGCCCCTTCATCTTTATGGCGACGGAATTGGAAGACAACTCTCCTCTTCCAAATCGTACTAACTATT
TTAGACAATACAGGGAGGAGACGTTTGTTGGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCATTGACCAGAGTATGATTTGTGTACTAACTGTGGATGTACATGCGAGAACATCAGTGCGAGTTTT
TATATATTTGTTCATATGAATATTCTCTCTATCAAAGAAATATAAACATATATAATTTGCGTATCCATTCGTTAGAAAAT
GAACAGGAGATTGTACGAAGAACTCTGCAATTATATTTGTTAAAACAAACAGTTGCAATTCAAACTATGGCCCATGATGT
CGCATGCACTGAAATGGTTTGTCTTTTCCTAGTTTTCTCTCAAAACAAACTTCTGCCCCACTTTTTTTTGAATTAAAGGG
CTTTCCCCCGTCCCAAATTTTTATTGAAAAAGCTAAGGCCACGGCATCCAACCCACAAAATAATTACCACAGCCGGACAG
TAGCTGCAGCAAAATTATTATAGGTAAGCCCTTCTAATAGCGTTTTAACCCGATCGATACAGGTGAATAACATCAATGCC
GATCTATCCTAAGGAGCTCCCCATGTCGACGATCAAGGCAGAAGACATTCAAGGAGCCACGTAGCTTGAGTACCAACGCA
CAACACCTTTCAGGAACGAACCAGAGAAACTACTAAAGTCAGGATGCACTTCAAGCTTCGCCACTTTCGCTCCTGGAAAG
ACAATGTCATTTCGCAAAAGCCATAAGCCGCACAAGGTATCAGTAGAGAATATATTAATTACTTCATCAGTTTTTCCTTG
CTTCCAAAAGGTAGCATGGTCAGAAAAAAACAAGGTACAAGGAAATAACCTATCTCATCAATTGCGTCCTAGATATAAAT
AAAGCACAAATCAAAGTACATGGCCGAACAGTACAAGGTAGATTTGCAGCCCTCGTATAAAGCAAATCTTGGGATAACCG
GACACCACAACCACACACGACTACAATGTCAAGTACTAACACAGGAAGGTCCCAATACAATGCTACGACACACACTGGAA
TACCTAAGCTCACGACAATGCCCTCTGAAGGGGAAAGGGTGCAAAGCGTCACCGATGTCGAGTACGAGACGGATGAGGGT
CTTCACCCGGAACACTTAGTCGAACCACATAACAATGTCCTAAAGAGGAGAGTGACACCCCACGGGCACTGCCATGCCAA
AGTGCGGAGCTTTCATTCGGCAGCTCACCCGTACCACCAGAAGCACCTAGGACACCCGAGTTGAGCATAGACCTCATGTC
AATTAATGAATAGCCATTAGGATTAGCAAATGTCATTAGTAGTTGCATGTGTCCATTAACTAAACATGCATCTTTCCCCA
CAGACACATCGTTTACGTACAATCGCCTCCTCTCCCCCTTTTCTCTCTTGTAATGTAGCTGACGGCCCTTGATGACGTCA
TTTCATCTTGTATCTATAAGCACGTTCCTAAACGCAGGCGTCGAGATCGCACTTTATGACAGGGGTTGTCTTATCGTGCC
TGGGTGCAAGATATCCATGACGCTCTCGGACATGCAGCACCTGCTCGCTGACTGCCCCAACTCCCATGAGGTGTGGCATG
AGGTGCTCTCATGGTGCCGCTCCATGGCCACTCTCCCGACGACGTTTTCTGAATGGTGGATCGTCTACCTGCTCGCATGC
CCCCACCATGCATCGCTGAGGGCTTTCCTCCATTATCATGCTCACGTCCTAATCCGCTCGGAAGCACCGCAACGGATGCA
TCTTCGACAACCAACAGCCTTCCGTCTCCTCACTCCTTTACGAGCTCAAGGAGGAGGCGCTGTTATGGGCCAAAGCCGGA
GCCACCACGATAATGAACCTACTTCCCGAGATGTACCCCTCAAATAAAATGTTGGAGCTGAGCAAGCCCTTTTCCTCTGC
TCAGGTGCACTAGCGCATGCCATGTCAGGTACATGCTGCAAGATGCACCATCCCATGTAATTCTATTTCCTTTTTTTTCA
ATGAAAAATACACAGCCTCTACGTATTGGCGAAAAAAAAGTCTAGAATTATTCGCTTGCTCCTGACTTCCGTTGATCTCC
ACTTGCTCCTGAAACAGTAACTCCACTCTTCAAATAATTTCACCAACTCCCACCTAA-TTTTCTACCGCGCGCAGGTTTT
CACCTCGACGCCGGGATGGATAGTCGGTTAGGGCCATGGGGTCCACCCCGCCAACCTGGCACCTGGCAGCCGGCTACTTC
GATTAACGACAAGAACACCGGG----------ACGGGAAGGGACGTGGCACCGGAGACGCCGTCGGAAAAG-ATTTCGCA
A-------CACCGCGCGCGCG-------------------------CGAGAGAGAT-----------GGCTTCTGCGCTG
CCGTGGAAGCCTCTCTTCTGGGAGCGCTTTGAGGATTCGCGTGCCCTCGCCGCCGGCGCCCGCGGCGACCTCGCTGCTGC
CACCGCC---------ACCATCGACCTCGCACTCGCATCGCCTCTGCGCGGTGGTGACGTCGACCGCGCTGTCTCGCTCA
TTGGAGAGTCGGCGGACAAGCTTGCCGTGGCGGGCAAGCATCTTGCCATCCTGCTTTCTGGCCTTGGGACCGTCGAGCTC
CTCGCGCGCCGATGGATCCGCGGCGATGACTCTCTACGGCAGCAGGCCCGACCGAGGGCGCGCGAGGCCAGGGCA--GGC
CGGCGCCGCCTACGACGAGGTGGCAATCTCTCGCGGCCACCTGGGAGCCGCGGCACGTCTGGTTGCCCGAGGCGACCTCC
CCGACATCTACTTCCGCGCCGAGTTTCTCGCCGCCACCAGAGCCGCGGCGGCGGCCTCGGAGCACCTCCACGGGGTGGAG
GACGCCCTGCGCATGCGCGGCAACCTCGCGCCTCCACTTCTTCCCCTGCACCGGAGCATCCACCCCGACACGCGCT---C
GGCGGCGGAGGCGGCGCACCCCAGCGCCAAGCGGA---------------------------------------------
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------------------------------------GGCGGCCAATCTCCTCCTCCTCCCCAGTCTCCAGCTTGGCCTCG
GGCCACGGTGGCAGTCCTGGGAGGGATCGCGCGCCGACGCCGGGCGCGCTGCCCTCGACCTCATGTGGTCGGCGTCCCCG
TGCTCGGCCCCCGACCTCATGTGGCCGCGGGACAATGTAGTGTGGCCTGGGACCGAATCACGCTCGTATGTTCAGGGACA
ACCCACTCCGTATACGTTCCTCAAAAAAAAACAATCCACTGCGTATACGTGGATCGTCCCTGAATCCTACTCGTCGATCG
TTAACCGTCTCCTACTCCCGTTGGCCAACTTTACTCTCCATATATGCAACACAAACGCCCTCCCAACACAACCAAAGAAC
CACAGGAGCCAGCTTCACTTTTCGCCGTCGGAACTTGATTCTCCGGTAACACTGAAAACACAAGTCAGCGATTGATCAGC
CGTCTGGGAACTT-GCCGTAGCGCCGTGTTTTGGTAGCGTGGAGAGTGCTTCTGCAATGGAACCACGTCACCCCGAGCTC
GAGGAGTCCAGCACTGCCACCGTGGACGAGGTGCTAAAGCCGGTGGAGGCGCCATCGGACGGCGAAGGATGCCCCATATG
CTTGGATCAAGAGGGCGCAACGACCGTGTGGAAGGAGACAGTGTGTGGGCACATCTTCCGTGGGCGATGCATGGAGAGGT
GGCTCCAGGCGAAGGGAAGTTGCCCCATGTGTCGGCGACAGCTTCAAGAAACACGTGCTCCTGCAAAACCAGATGTTCGA
TATCGTAGCCCCTTCATTTTTATGGCGATGGAATTGGAAGACAACTCTCTTCTTTCAAATCATACTAACTATTTTAGACA
ATACAGGGAGGACAC--TTGCTGG------GTGATGAGACAATGTCGACAATATATGCAACGATTTTTGTACTTT-----
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>chr3A_507
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------------------CGCGGCGACGACTTTCTAGAGCAGCAGGCCCGACCGAGGGCGCGCAAGGCCAGGGCACGGGC
CGGCGCAGCCTAGGACGAGGTGGCTCTCTCTTGCGGCCACCTCGGAGCCGCGGCACGTCTGGTTGCCCGCGGCGACCTCC
CCGACATCTACTTCCGCGCCAAGTTTCTCGCCGCCAC-AGAGCCGCGGCGGCGTCCTCGGAGCACCTCCACGGGGTGGAC
GACGCCCTGAGCATCCGCCGCGACCTCGCGCCTCCACTTCTTCCCCTGGACCGGAGCGTTCACCCCGACACGCGCT---C
GGCGC---------CGCACCCCAGCGCCAAGCGGGAGGAAGAACACGACAAGGCGTGGAAGGCCCTGGCATGCTCCACTC
CAGCCGCG--------TGCTACGCGGATGCGCCGAGCTCCCGGAGCTCAAGGAGCCCACGCCGAGCTCGGCAAGTGCGTC
AACGCCGTGAAGTCCTTCGCCGCCAAGAAGGCCGCCGCCGACACGTGCAGCGCAGCGCTTCGCGCGCTGGACGCGGCTCA
CGCCGCGGTGTCCCGCGTCCTGACGACCAACGAGTGGGCGGCCAATCTCCTCCTCCTCGCCAGCCTCCAGCTTGGCCTCG
GGCTGCGGTGGCAGTCCTGGGAGGGATCGCTGGCCGACGCCGGGCGCGCTGCCCTCGACCTCGTGTGGTCGCCGTCCTCG
TCCTCGGCCCCCGACCTCATCTGGGCCCGGGGCAGTGTAGTGTGGGCTGGGACCGAATCACGCTCGTACAGTACTACTCC
ACCG----CGTATACGTTCCTAAAAAGAAAAAACTCCACTGCGTATACGTCGATCATCCCTGAATCCTACTCGTGGATCG
TAGACCGTCTCCTACTCCCGTCGGGCAACTTTCCTCTCCATATATGCAACCCAAACGCCCTCCCAACACAACCAAAGAAC
CACACGAGCCAGCTTCACTCTTCGCCGTCGAAACTAGATTCCCCGGTAACACTGAAAACCCAAGTCAGCAATCGATCAGC
CATCTGGGAAACACGCCGTAGTGCCGTGTTTTCGTAGCGTGGAGAGTTCTTCTTCCATGGAACCACGTCAGCCCGAGCGC
GAGGAGTCCAGCACTGCCACCGTGGACGAGGTGCTAAAACCAATGGAGGCGCCATCGGACGGTGAAGGATGCCCCATATG
CTTGGATCAAGAGGGGGCAACGACCGCGTGGAAGGAGACGGTGTGTGGACACATCTTTCATGAACGATGCGTGGAAAGGT
GGCTCCAGGCGAAGGGAAGTTGCCCCATGTGTCGGCTACAACTTCAACAACCACGTGCTCCTGCAAAACCAGATGTTCGA
TATCGTAGCCCCCTCATCTTTATGGCGATGGAATGGGAAGACAATTCTCCTCTTTCAAATCGTACTAACTATTTTAGACA
ATATAGGGAGGAGACTTTTGTTGG------GTGATGAGACAATGTCGAGGACATATTTAATGAATTTTGTTATTTTTTCA
GACTGTCGGTTGTAC---------TTACTGTAGATGTACATACGAGAACATCAGTAAGAGTTTCATATATTTGTTCATA-
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TGAATATTCTCTCTATCAAAGAAATA------------------------------------------------------
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>chr3D_945
GCCATTTGGG----------------------------------------------------------------------
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---------AACACGCCGTAGTGCCGTGTTTTCGTAGCATGGAGAGTACTTCTGCCATGGAACCACGTCAGCCCGAGCTC
GAGGAGTCCAGCACTGCCACCGTGGACGGGGTGCTAAAGTCGGTGGAGGCGCCGTCGGACGGTGAAGGATGCTCCATATG
TTTGGGTCAAG-GGGGGCAACGACCGCGTGAAAGGAGACGGTGTGTGGGCACATCTTTCATGGGCGATGTGTGGAGAGCT
GGCTTGAGACGATGGGAAGTTGCCCCATGTGTCATCGTGAGCTTCAAGAACCACCTGGTGCTGCAAAATATGGTATTCGA
---CGTAGTCCCTTCATCTTGATGGCGATGGAATTAATGGACAACTCCGACCTTCCAGATCGAAGTAACTATTTTAGGCA
ATATAGGTAGGAGACGTTTGTAGG------GTGATGAGACAATGTCAACATATGCAACG---------------------
-------------AC---------TTATTGTAGCTGTACATGTCAGAACATCACTAAGAGATTCATATATTTGATCATAT
GAATATTCGAGAGTGGCGTTTTGGCACATGAGAACATATGCTCCTTGCTTTTAAAATGTGCTTTAAACATATTTTGAAAT
GTCATAAAATTCTGACAAAATGATTTCTGCGTACATCTCGACATTCTACGTGCACACAAACTCATTTCGTGAAAAACCGA
CAACTTTTGCGTCACATATAAAAAAGACAAAACTTAGTGTTAAAATAGGCTATTCATGAGACATTTTTTTGTTTTTTTTA
CACAAGGCGTATAAATGTCGGATTTTCGCGAAACTTGGCATGCGTACATTCAATGATGAGATGTACACGTCAAATTTGTG
TTTGGAATTTTTTTTGGCATTTTGAAATATATTTTTCAATGGCAGGAGCATATGCTCCCATGTGCCAAAGTGAATTTCCG
TGAATATTCTCTCTATCAAACAAATAAAT---------------------------------------------------
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------------------------------------------------------------------------------AT
ATATAGTTTGTGTATCCATTAGTTAAAGCAGGGCAAGCACCTTTTTCTAAAAAAAAGTTTAACATGAGATTGTATGAAAA
ACTCCACAACTATTTTTGTCAAAACAAACGGTTGCAATTTGAACTATGACAAGTAATATCTCATGCATTGGAATGGTATG
TCTTTTCTGGTTTTCTCTCAAAACAGGGTCTTGCTCCACTTTATAAATAAAGCACAAGCCAAAGTAAATGGCTAAACAAT
AGAAGGTAGTGAGGCAGCCCTCTTAGAAACTAAATCCCGGGATAGGCGAAAACCCCCGACCGCACATGACCGCGGTGTTG
AGAACTAACACAAGAAGGTCTGAATACAATGAATCGACACACATTAGGAGACCTAAGCTCCACGGCAATGCCCTCAGAAG
GGGAAAGGGCGTGGAGCGTCACCGCTG-TCGAGTCCGAGACAGACGAGGGTCTTCACTCGGAACCCT
>chr1A_1499
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--------------------------------GTGCGGCTCAGGTTGGTAATGGTTGCTCAAGACCCTCTCATGGTTACC
GTTGTGTTGCGGTGAGCTTGGTGCTCTTGGTGTTGTCTTGACTCATCTTTGCTCAAGGATGGCGCAAGATGCCTCTCAAA
CTGCTATTCGTTCCATTTTTCTGTGGTGGAGCCCCAGTCAAGGTTCGTGTCTGGGATGACACTCGTTGATTGTGGATGCT
CCTGAGTTGTGCCATGGGGCCGGTATGCCCGCCGATGCGTTCGGTTGTTTGCAAAGTCCTGGTATTGTGATCTCTCGACA
ACACCCCACATCTACTTGTGTCTCTCATGATGATGGTCTTATGTCTGCCAGCTAGGCCGTGCCTTGTACGGTTTTCGGCC
CGGTTTCCCTTATAAACGGGGTTAATTTGTT-AAGGTTTTCGATCCGGTTTTCCTTATAAACTGGATCACCACTTTGGCA
TTCTGGCCACTTTGAGTAATAT--TCAGGTGGGGAAACTCCCCCCTCCCCCCTCCC------------------------
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>chr4D_1499
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--------------------------------GTGCGGCTCAGGTTGATAATGGTTGCTCAAGACCCTCTCATGGTTACC
GTTGTGTTGCGGCGAGCTTGGTGCTCTTTGTGTTATCTCGACCCATCTTTGCTCAAGGATGGCGCAAGATGCCTCTCAAA
CTGCTATTCGTTCCGTTTTTCTGTGACGGAGCCCCAGTCAAGGTTCGTGTCTGGGATGACACTCGTTGATTGTGGATGCT
CCTGAGTTGTGCCATGGGGCCGGTATGCCCGCCGATGCGTTCGGCTGTTTGCAAAGTCCTGGTATTGTGATCTCTCGACG
AC-CCCCACATCCACT--TGTCTCTCATGGTGATGGTCTTATGTCTGCCAGCTAGGCCGTGCCTTGTACGGTTTTCGGCC
CGGTTTCCCTTATAAACAGGGTCAATTTGTT-AAGTTTTTTGATCCGGTTTTCCTTATAAACTGGATCACCACTCTGGTA
TTCTGCCCACTTTGAGTAATATATTCAGGTGGGGAA----CCCCTCCCCTCCCTGATTCTCACAAAAAAAAA--------
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>SNPs
SSSS------S---------------------------------------------------------------------
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------S--S----------------------------------------------------------------------
----------------------SSSSSSSSS-------------------------------------------------
-S--S---------------S-S-S-SSSSSSSSSSSS------------------------------------------
---------------------------S-----S----S-----------------------------------------
-S-----SSSSSSSSS------S---------------------------S-------S----------S----------
----------S------------------------------S-----S-----S-------------S------------
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---S--------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
----SS-SSSS-----------S-----------------------------------------------S---------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
---S--------S-------------------S------------S----------------------------------
-------------------------------------------------------------------S------------
-------------S---S-----------------------------------------------S--------------
----------------S-----S------------------------------S---S---------------------S
------------------S--------S-----S-------------------------------------S--------
-------S----------------SSSSSS--------------------------------------------------
--------------SSSSSSSSSS---------------S----------------S--S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------SSSS---------------------S-------------------------S
-------------S-----SS--------------------------------------------S-------------S
S-----------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S--------S
-------------------------------S--------------------S--------S------------------
--S-S----------------------S--------------------------S-----S-S----S----SSSSSS--
-------SS-----------S-----------------S--------------S--------------------S---S-
----SS-------S--------------S---------------------SSS-----------SS---S-------S--
-------S----------SS----S--S---S------------------S-----------S-SS--------------
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--------------------------S-----SS---------------S--------------S--SS-----------
S-------S--SS----S-----SSSSS----S---S------------------------------
>forward_2824
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----AACGACAAGAACACCGGGAC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>reverse_5662
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TTGGATCACCACTCTGGCA
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
