>input_sequence_82317
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--------------------------------------------------------ATGACATCAGCTATCCAGGCCGAA
GCATTTAGCATGATGCTAGCATACAAGATTGCGGAGCGGCTTCAGATTCAGCAGGGAACATTTCTGACGGACAGCATGAT
TCTGGCGAAAGCTATAGCGGCCAGCAAGCCCATTCTTGATCCAGGTCATTGGACTATAAGGCCACAGCTTGCATGCATAA
CAGCTTCCTCAACCTTTGATGCTACAAGAATTTATCATATCAATTGGAGCTACAACTTACGAGCACAACACCAAGCTAGA
TTAGCAATCAAAACTCAAAACTCCCCTTCAAGGTTCACATGT-TTAGGTTCAGGAAATGG-TTCTTGCCTTAATGCAGTA
CTAGCTGCACTTTCTTCAGAACTGC---AATAA-----------------------------------------------
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>chr4A_1_TraesCS4A01G470900
GTCATCAATTCTGAAAATTATAAAATGAAATACCTTTATTAACTGAAAA-CAGGATAACTAAACCTAACTAGGCACAATA
TTGAGTTTCTGTCAAACTGCTTTTTTCAGTTTCTTGCACAACAAAGTATGCACAATACTAACAATTTGCAAGGTCACCAT
AACTGAATCTAACCATGCAAAAAACTAGCCTAATTTACTGA----------------ATCTC----------------TG
A--------ATCTC--------ACAACCATGCAAAAAACT-----------ATGTCGTACCTGCCGCCGCCCGCAGAACG
AGGAAGCTTCCGCCGGCCTTGAGCTCTGCTTCTTGTCGTCGACGGTGGTCGCGCCGGCGCCGACCAATCCAACCTCTGCT
GCGCGCCGCCAGCGGAAGGATTAGATTCGGATTGAGAAGGCTGTTGCGCCGCGCTGTCGCCCGGAGGTATGCCTGAATGG
CCGCCGGAGTTTGCATCCACAGCCGCCATGGCTGGCGACGGCTAGGGAAAGGGAG-GAGCTC-GGGGG-AGAGTGAGAGA
GCTGGTGGGGAAGGGGGAACCGGCCGGCCAGGTC-TGACCTGAT-CCGACTAGGTGCGGCCGACGAGCGGCTCTAACAGC
CCCGCGT--G--CGCCGTTAGCCGTTAGGTGGGCCACCCGCCTGGCAAGTGGGCCACTATCGTCAGAATCGCTGTTAAAA
CGGTCAAAACGACCATTAAGTCAACCTGGTAGTTTTTAGTCATGTCTTTACGTTTTTTTGGTAGTTTTTTGCCACTTTTA
AAAAA-TGGTAGTTCTGTGGGACACGAACCCCTAAAGTGATAGTTTTTT-GTCAATCACTCCAGCTCAGTCTCTAGAATG
CAAAGTAGTCAGCTTGCATGGAACTAACAAGGATGTGCCTGTGGAGACCCTTTTGCAAAGAC------------------
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----------AGGATCAATTGACAACGCAATCGACACCATCTCCTGGGGAAACAATCATGGACATCTCATGTTTTTCAGG
TAC-----------------------------------------------------------------------------
AGTTTGCAGGCGATGGACGAAGTTCTCAGCTATGCATCTCGGCTATCTTTCCACCGATGACATCAGCTATCCAGGCCGAA
GCATTTAGCATGATGCTAGCATACAAGATTGCGGAGCGGCTTCAGATTCAGCAGGGAACATTTCTGACGGACAGCATGAT
TCTGGCGAAAGCTATAGCGGCCAGCAAGCCCATTCTTGATCCAGGTCATTGGACTATAAGGCCACAGCTTGCATGCATAA
CAGCTTCCTCAACCTTTGATGCTACAAGAATTTATCATATCAATTGGAGCTACAACTTACGAGCACAACACCAAGCTAGA
TTAGCAATCAAAACTCAAAACTCCCCTTCAAGGTTCACATGT-TTAGGTTCAGGAAATGG-TTCTTGCCTTAATGCAGTA
CTAGCTGCACTTTCTTCAGAACTGCAATAATGCAAGGTTGTACTTGTAC----GATGCTGTTAATCAATGAAATTT-GTG
GGTTCAAAAAAAAAAAGATACCCCGCGTGGACGGCGACAGCGCATGGCAGCTGCAAACTCCAGCGAAGCCGCGGTCCAGC
CAGAGCCCAAGCCTAGCCAAGCAGGGCCAGGAATATCAGACCATTCGGCCGTCGGTCCGGTCTCAGGCCGGCTCGTTCCT
GGCGGTCTAAAGGACAGCTTGGTCAGTGAACGGACCTGACCTGACCGTGTCCATCTTTA--ATACTGACCCATAATGGTC
CCGTCATCCTACTTTAACTAGACAAA-TGGAGTGGTTGATGAGAGTGAGGTCGTCAATTAGGTTGACGAGCTGAAGATGG
CAGGACTCGGTGCTAAGCAAGTATGTCCTCTTCCATGCAGGCCGGCAGAGGGTGGTTGATGAGGGGAGCCTATCGATCTG
TTAAATCTAATT-GTAAAGTTGGCAGGATATGTAGCTAAGAGACCAGGTAGCAGGTTGGAAGGGATTGGATTTATAATTT
CACAATGCAATCATCG------------CCAAATTGCAATGGTATAATGTTTCTAGGAAGCTTCCTGTGCCTTTC-----
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---------------------------CGGCAAGTCGGAACCCTATGT--TATTTTGTGTCAATTTCCGGAGCAATTTCC
AGCTGTT-TTGTGCTATAAGGTTA-TTTATGTAGCTCCTTTGTCTCTATCGTGGCTCCATGG-------TCTACACCCAG
ATCGATTCACCTGTGGAAGTGAGACA--TTGTGAAGACACAT--TGAACCCTGATGACTGTAAAATTGATCTATATCATA
CCTCATTGTGCAGTTGGAGAGAAACGCCTATAGAACCTCAAAGAAAGTTACAGAGTTCAGCAAACAGTAGCATGCTGCTT
GCACAGGAAGAATTCCAGCAAGTAGC------ACATTCTCTAGCAATATAGAGTTATAGACTGAAAGTGAGGATGGGACA
TCTGGTTTGGAAACTGATATTTGTTTCCTCGAGCTATA-TTTTTGCCCTGCAGATGCCCTTTATA
>chr4A_1
GTCATCAATTCTGAAAATTATAAAATGAAATACCTTTATTAACTGAAAA-CAGGATAACTGAACCTAACTAGGCACAATA
TTGAGTTTCTGTCAAACTGCTTTTTTTAGTTTCTTACACAACAAAGTATGCACAATACTAACAATTTGCAAGGTCACCAT
AATTGAATCTAACCATGCAAAAAACTAGCCTAATTTACTGA----------------TTCTC----------------TG
A--------ATCTC--------ACAACCATGCAAAAAACT-----------ATGCCATACCTGCCGCCGCCCGCAGAACG
AGGAAGCTTCCGCCGACCTTGAGCTCTGCTTCTTGTCGTCGATGGTGGTCGCGCCGGCGCCGACCAATCCAACCTCTGCT
GTGCGCCGCCAGCAGAAGGATTAGATTCGGACTGAGAAGGCTGTTGCGCCGCGCTGCCGCCCGGAGGTATGCCTGAATCG
CCACCGGAGTTTGCATCCACAGCCGCCATGGATGGCAACGGCTAGGGCAACGGAG-GAGCTC-GGGGA-AGAGTGAGAGA
GCTGGTGGGGAATGGGGAACCGGCCGGCCAGGTC-TGACCTGGT-CCGACCAGGTGCGACCGACGAGCGGCTCTAACGGC
CTCGCGTGCG--CGCCGTTAGCCGTTAGGCGGGCCGCCCGCCTGGCAAGTGGGCCACTATCGTCAGAATCGCTGTTAAAA
CAGTGAAAACGACCATTAAGTCAACCTGGTAGTTTTTAGTCATGTTTTTAAGTTTTTTTGGTAGTTTTTGGCCACTTTTA
AAAAAGTGGTAGTTCTGTGGGACGCGAACCCCTAAAGTGGTAGTTTTTG-GTCAATCACTC-------------------
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>chr1D_1
GTCATCAATTCTGAAAATTATAAAATGAAATACCTTTATTAACTGAAAA-CAGGATAACTGAACCTAACTAGGCACAATA
TTGAGTTTCTGTCAAACTGCTTTTTTCCGTTTCTTACACAACAAAGTATGCACAATACTAACAATTTCCAAGGTCATCAT
AACTGAATCTAACCATGCAAAAAACTAGCCTAATTTACTGA----------------TTCTC----------------TG
A--------ATCTC--------ACAACCATGCAAAAAACT-----------ATGCCGTACCTGCCGCCGCCCGCAGAACG
AGGAAGCTTCCGCTGACCTTGAGCTCTGCTTCTTGTCGTCGACGGTGGTCGCGCCGGCGCCGACCAATCCAATCTCTGCT
GCGCGCCGCCAGCGGAAGGATTAGATTCGGACTGAGAAGGCTGCTGCGCCGCGCTGCCGCCTGGAGGTATGCCTGAATCG
CCGCCGGAGTTTGCATCCACAGCCGCCATGGCTGGCGACGGCTAGGGCTAGGGAG-GAGCTC-GGGGG-AGAGTGAGAGA
GCTGGTGGGGACGAGCGGCCCGGTCGGCCAGGTTATGACCTGGTCCCGACCAGGTGCGACCGACGAGCGGCTCTAACGGC
CCCGC--GCG--CGCCGTTAGCACTTAGGCGGGCCGCCCGCCTGGCAAGTGGGCCACTCACGTCAGAATCGCTGTTAAAA
CGGTCAAAATCACCATTCAGTCAACCTGGTAGTTTTTAGTCATGTTTTTAC-TTTTTTTGGTAGTTTTCGGCCACTTTTA
AAAAAGTGGTAGTTCTGTGGGACGCGAACCCCTAAACTAGTAGTTTTTT-GTCAAACACTC-------------------
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>chr3D_1
GTCATCAATTCTGAAAATTATAAAATGAAATACCTTTATTAACTGAAAA-CAGGATAACTGAACCTAACTAGGCACAATA
TTGAGTTTCTGTCAAACTGCTTTTTTCAGTTTCTTACACAACAAAGTATGCACAATACTAACAATTTCCAAGGTCACCAT
AACTGAATCTAACCATGCAAGAAACTAGCCTAATTTACTGA----------------TTCTC----------------TG
A--------ATCTCTGAATCTCACAACCATGCAAAAAACT-----------ATGTCGTACCTGCCGCCGCCCGCAGAACG
AGGAAGCTTCCGCCGACCTTGAGCTCTGCTTCTTGTCGTCGACGATGGTCGCGCCGGCGCCGACCAATCCAACCTCTGCC
GCGCGCCGCCAGCGGAAGGATTAGATTCGAACTGAGAAGGCTGCCGCGCCGCGCTGCCGCCCGGAGGTATGCCTGAATCG
CCGCCGGAGTTTGCATCCACAGCCGCCATGGCTGGCGACGGCTAGGGCTAGGGAG-GAGCTC-GGGGG-AGAGTGAGAGA
GCTGGTGGGGAATGGGGAACCGGCCGGCCAGGTC-TGACCTGGTG-CGACCAGGTGCGACCGACGAGCGGCTCTAACGGC
CCCACGCACG--CGCCGTTAGCTGTTAGGCGGGCCGCCCGCCTGGCAAGTGGGCCACTAACGTCAGAATCGCTGTCAAAA
TGGTCAAAACCACCATTCAGTCAACCTGGTAGTTTTTAGTCACGTTTTTACGCTTTTTTGGTAGTTTTCGGCCACTTTTA
AAAAAGTGGTATTTCCGTGGGACGCGAACCCCTAAACTGGTAGTTTTTTTGTCAAACACTC-------------------
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>chr3D_1
GTCATCAATTCTGAAAATTATAAAATGAAATACCTTTATTAACTGAAAA-CAGGATAACTGAACCTAACTAGGCACAATA
TTGAGTTTCTGTCAAACTGCTTTTTTCAGTTTCTTACACAACAAAGTATGCACAATACTAACAATTTCCAAGGTCACCAT
AACTGAATCTAACCATGCAAAAAACTAGCCTAATTTACCGACTCTCTGAATCTCTGAATCTC----------------TG
A--------ATCTCTGAATCTCACAACCATGCAAAAAACT-----------ATGCCGTACCTACCGCCGCCCGCAGAACG
AGGAAGCTTCCGCCGACCTTGAGCTCTGCTTCTTGTCGTCGACGGTGGTCGTGCCGGCGCCGACCAATCCAACCTCTGCT
GCGCGCCACTAGCAGAAGGATTAGATTCGGATTGAGAAGGCTGCTGCGCCGCGCTGCCACCCGGAGGTATGCCTGAATCG
CCGCCGGAGTTTGCATCCACAGCCGCCATGGCTGGCGACGGCTAGGGCTAGGGAG-GAGCTC-G-GGG-AGAGTGAGAGA
GCTGGTGGGGACGAGCGGCCCGGTCGGCCAGGTTATGACCTGGTCCCGACCAGGTGCGACCGACGAGCGGCTCTAACGGC
CCCGCGCACG--CGTCGTTAGCCGTTAGGCGGGCCGCCCGCCTGGCAAGTGGGCCACTCACGTCAGAATCGCTGTTAAAA
CGGTCAAAACCACCATTCAGTCAACCTGGTAGTTTTTAGTCACGTTTTTACG-TTTTTTGGTAGTTTTCGGCCACTTTTA
AAAAAGTGGTAGTTCTGTGGGACGCGAACCCCTAAACTGGTAGTTTTTT-GTCAAACACTC-------------------
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>chr5D_1
GTCGTCAATTCTGAAAATTATAAAATGAAATACCTTTATTAACTGAAAA-CAGGATAACTGGACCTAACTAGGCACAATA
TTGAGTTTCTGTCAAACTGCTTTTTTCAGTTTCTTACACAACAAAGTATGCACAATACTAACAATTTCCAAGGTCACCAT
AACTGAATCTAACCATGCAAAAAACTAGCCTAATTTACTGA----------------TTCTC----------------TG
A--------ATCTCTGAATTTCACAACCATGCAAAAAACT-----------ATGTCGTACCTGCCGCCGCCCGCAG-ACG
AGGAAGCTTCCGCCGACCTTGAGCTCTGCTTCTTGTCGTCGACGGTGGTCGCGCCGGCGCCGACCAATCCAACCTCTGCT
GCGCGCCGCCAGCGGAAGGATTAGATTCGGACTGAGAAGGCTGCTGCGCCGCGCTGCCGCCCGGAGGTATGCCTGAATCG
CCGCCGGAGTTTGCATCCACAGCCGCCATGGCTGGCGACGGCTAGGGCTAGGGAG-GAGCTC-GGGGG-AGAGTGAGAGA
GCTGGTGGGGACGAGCGGCTCGGTCGGCCAGGTTATGACCTGGTCCCGACCAGGTGCGACCGACGAGCGGCTCTAACGGC
CCCGC--GCG--CGCCGTTAGCCGTTAGGCGGGCCGCCCGCCTGGCAAGTGGGCCACTCACGTCAGAATCGCTGTTAAAA
CGGTCAAAACCATCATTCAGTCAACCTGATAGTTTTTAGTCACGTTTTTATGTTTTTTTTGTAGTTTTCGGCCACTTTT-
-AAAAGTGGTAGTTATGTGGGACGCAAACCCCTAAACTGATAGTTTTTT-GTCAAACACTC-------------------
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>chr5D_1
GTCATCAATTCTGAAAATTATAAAATGAAATACCTTTATTAACTGAAAA-CAGGATAACTGAACCTCACTAGGCAAAATA
TTGAGTTTCTGTCAAACTGCTTTTTTCAGTTTCTTACACAACAAAGTATGCACAATACTAACAATTTCCAAGGTCACCAT
AACTGAATCTAACCATGCAAAAAACTAGCCTAATTTA------------------------C----------------TG
A--------ATCTCTGAATCTCACAACCATGCAAAAAACT-----------ATGCCGTACCTGCCGCCGCCCGCAGAACG
AGGAAGCTTCCGCCGACCTTGAGCTCTGCTTCTTGTCGTCGACGGTGGTCGCGCTGGCGCCGACCAATCCAACCTCTGCT
GCACGCCGCCAGCGGAAGGATTAGATTCGGACTGAGAAGGCTGCTACGCCGTGCTGCCGCCCGGAGGTATGCCTGAATCG
CCGCCGGAGTTTGCATCCACAGCCGCCATGGCTGGCGACGGCTAGGGCTAGGGAG-GAGCTC-G-GGG-AGAGTGAGAGA
GCTGGTGGGGACGAGCAGCCCGGTCGGCCACGTTATGACCTGGTCCCGACCAGGTGCGACCGACGAGCGGCTCTAACGGC
CTCGC--GCGCGCGCCGTTAGCCGTTAGGCAGGCCGCCCGCCTGTCAAGTGGGCCACTCACGTCAGAATCGTTGTTAAAA
CGGTCAAAACCACCATTCAATCAACCTGGTAGTTTTTAGTCACGTTTTTTCATTTTTTTGGTAGTTTTCGGCCACTTTT-
AAAAAGTGGTAGTTCTGTGGGACGCAAACCCCTAAACTGGTAGTTTTTT-GTCAAACACTC-------------------
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>chr5D_1
GTCATCAATTCTAAAAATTATAAAATGAAATACCTTTATTAACTGAAAA-CAGGATAACTGAACCTAACTAGGCACAATA
TTGAGTTTCTGTCAAACTGCTTTTTTCAGTTTCTTACACAACAAAGTATGCACAATACTAACAATTTCCAAGGTCACTAT
AACTGAATCTAACCATGCAAAAAACTAGCCTAATTTA------------------------CTGATTCTCTGAATCTCTG
A--------ATCTCTGAATCTCACAACCATGCAAAAAACT-----------ATGCCGTTCCTGCCGCCGCCCGCAGAACG
AGGAAGCTTCCGCCAACCTTGAGCTCTGCTTCTTGTCGTCGACAGTGGTCGCGCCGGCGCCGACAAATCCAACCTCTGCT
GCGCGCCGCCAGTGGAAGGATTAGATTCGGACTAAGAAGGTTGCTGCGCCGCGCTGCCGCCCGGAGGTATGCCTGAATCG
CCGCCGGAGTTTGCATCCACAGCCGCCATGGCTGGCGACGGCTAGGGCTAGGGAG-GAGCTC-GGGGG-AGAGTGAGAGA
GCTGGTGGGGAATGGGGAGCCGGCCGGCCAGGTC-TGACCTGGT-CCGACCAGGTGCGACCGACGAGCGGCGCAAACGGC
CCCGC--GCGCGCGCCGTTAACCGTTAGGCGGGCCGCTAGCCTGGCACGTGGGCCACTCACGTCAGAATCGCGGTTAAAA
CGGTCAAAACAACCATTCAGTCAACCTGGTAGTTTTTAGTCACGTTTTTACGTTTTTTTGGTAGTTTTCGGCCACTTTTA
AAAAAGTGGTAGTTCTATGGGACGCGAACCCCTAAACTGGTAGTTTTTT-GTCAAACACTC-------------------
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>chr5D_1
GTCATCAATTCTGAAAATTATAAAATGAAAAACCTTTATTAACTGAAAA-CAGGATAACTGAACCTAACTAGGCACAATA
TTGAGTTTCTGTCAAACTGCTTTTTTCAGTTTCTTACACAACAAAGTATGCATAATACTAACAATTTGCAAGGTCACCAA
AACTGAATCTAACCATGCAAAAAACTAGCCTAATTTA------------------------CTGATTCTCT---------
---------------GAATCTCACAATCTATGGTGGGATCTACTGGATGAGATGCCGTACCTGCCGCCGCCCGCAGAATG
AGGAAGTTTCCGCTGACCTTGAGCTCTGCTTCTTGTCGTCGACGGTGGTCGCGCCGGCGCCGACCAATCCAACCTCTGCT
GCGCATCGCCCGCGGAAGGATTAGATTCGGACTGAGAAGGCTGCTGCGCGGCGCTGCCGCCCGGAGGTATGCCTGAATCG
CCGCCGGAGTTTGCATCCACAACCGGCATGGCTGGCGATGGCTAGGGCTAGGGAG-GAGCTC-G-GGGGAGAGTGAG---
GAGGGTGGGGAATGGGGAGCCGGCCGGCCAGGTC-TGACCTGGT-CCGACCAGGTGCGGCCAGGTGCGAGCTCTAACGGC
CC--C--GCGCGCGCCGTTAGCCGTTAGGCGGGCCGCCAGCCTGGCATGTGGGCCACTCACGTCAGAATCGCGGTTAAAA
CGGTCAAAACCACCATTCAGTCAACCTGGTAGTTTTTAGTCACGTGATTAC-GTTTTTTTGTAGTTTTCGGCCACTTTTA
AAAAAGTGGTAGTTCTGTGGGACGCGAACCCCTAAGCTGGTAGTTTTTT-GTCAAACACTCCA-----------------
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>chr6D_1
GTCATCAATTCTGAAAATTATAAAATGAAATACCTTTATTAACTGAAAA-CAGG-TAACTGAACCTAACTAGGCACAATA
TTGAGTTTCTGTCAAACTGCTTTTTTCAGTTTCTTACACAACAAAGTATGCACAATACTAACAATTTCTAAGGTCACCAT
AACTGAATCTAACCATGCAAAAAACTAGCCTAATTTA------------------------CTGATTCTCT---------
---------------AAATATCACAACCATGCAAAAAACT-----------ATGCCGTACCTGCCGCCGCCCGCAGAACG
AGGAAGCTTCCGCCGACTTTGAGCTCTGCTTCTTGTCGTCGACGGTGGTCGCGCCGGCGCCGACCAATCCAACCTCTACT
GCGCGCCGCTAGCGGAAGGATTAGATTCGGACTGAGAAGGCTGCTGCGCCGCGCTGCCGCCCGGAGGTATGCCTGAATCG
CCGCCGGAGTTTGCATCCACAGCCGCCATGGCTGGCGACGGCTAGGGCTAGGGAG-GAGCTC-G-GGG-AGAGTGAGAGA
GCTGGTGGGGACGAGCGGCCCGGTCGGCCAGGTTATGACCTGGTCCCGACCAGGTGCGGCCGACGAGCGGCTCTAACGGC
CCCGC--GCGCGCGCCGTTAGCCGTTAGGCGGGCCGCCCGCCTGGCAAGTGGGCCACTCACGTCAGAATCGCTGTTAAAA
TGGTCAAAACCACCATTCAGTCAATCTGGTAGTTTTTAGTCACGTTTTTT---------GATAGTTTTCGGCCACTTTT-
AAAAAGTGGTAGTTCTGTGGGACGCGAACCCCTAAACTGGTAGTTTTTT-GTCAAACACTCC------------------
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-----------------------------------------------------------------
>chr7D_1
GTCATCAATTCTGAAAATTATAAAATGAAATACCTTTATTAACTGAAAA-CAGGATAACTGAACCTAACTAGGCACAATA
TTGAGTTTCTGTCAAACTGCTTTTTTCAGTTTCTTACACAACAAAGTATGCACAATACTAACAATTTCCAAGGTCACCAT
AACTGAATCTAACCATGCAAAAAACTAGCCTAATTTA------------------------CTGATTCTCT--------G
AATCTCTGAATCTCTGAATCTCACAACCATGCAAAAAACT-----------ATGCCGTACCTACCGCCGCCCGCAGAACG
AGGAAGCTTCCGCCGACCTTGAGCTCTGCTTCTTGTCGTCGACGGTGGTCGCGCCGGCGCCGACCAATCCAACCTCTGAT
GCGCGCCGCCAGCGAAAGGATTAGATTCGGACTGAGAAGGCTGCTGCGCCGCGCTGCCGCCCGGAGGTATGCTTGAATCG
CCGCCGGAGTTTGCATCCACAGCCGCCATGGCTGGCGACGGCTAGGGCTAGG---TGAGCTC-G-GGG-AGAGTGAGAGA
GCTGGTGGGGACGAGCGGCCCGGTCGGCCAGGTTATGACCTGGTCCCGACCAGGTGCGACCGACGAGCGGCTCTAACGGC
CCCGC--GCGCGCGCCGTTAGCCGTTAGGCGGGCCGCCCGCCTGGCAAGTGGGCCACTCACGTCAGAATCGCTGTTAAAA
CGGTCAAAACAACCATTCAGTCAACCTGGTAGTTTTTAGTCACGTTTTTACGTATTTTTGATAGTTTTCGGCCACTTTTA
AAAAAGTGGTAGTTCTGTGGGACGCGAACCCCTAAACTGATAGTTTTTT-GTCAAACACTC-------------------
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>chr2D_43
------------------------------------------CTGAAAATCAGGATAACTGAACCTAACTAGGCACAATA
TTGAGTTTTTGTCAAACTGCTTTTTTCAGTTTCTTACACAACAAAGTATGCACAATACTAACAATTTCCAAGGTCACCAT
AACTGAATCTAACCATGCAAAAAACTAGCCTAATTTA------------------------CTGATTCTCT--------G
A--------ATCTCTGAATCTCACAACCATGCAAAAAACT-----------ATGCCGTACCTGCCGCCGCCCGCAGAATG
AGGAAGCTTCCGCCGACCTTGAGCTCTGCTTCTTGTCGTCAACGGTGGTCGCGCCGGCGCCGACCAATCCAACCTCTGCT
GCGCGCCGCTAGCAGAAGGATTAGACTCGGACTGAGAAGGCTGCTGCGCCGCGCTGCCGCCCGGAGGTATGCCTGAATCG
CCGCCGGAGTTTGCATCCACAGCCGCCATGGCTGGCGACGGCTAGGGCTAGGGAGTGAGCTCAG-GGG-AGAGTGAGAGA
GCTGGTGGGGACGAGCGGCCCGGTCGGCCAGGTTATGACCTGGTCCCGACCAGGTGCGACCGACGAGCGGCTCTAACGGC
CCCGC--GCGCGCGCCGTTAGCTGTTAGGCGGGCCGCCCGCCTGGCAAGTGGGCCACTCACGTCAGAATCGCTGTTAAAA
CGGTCAAAACAACCATTCAGTCAACCTGGTAGTTTTTAGTCACGTTTTTACGTATTTTTGGTAGTTTTCGGCCACTTTTA
AAAAAGTGGTAGTTCTGTGGGACGCGAACCCCTAAACTGGTAGTTTTTT-GTCAAACACTCC------------------
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>chr2D_791
--------------------------------------------------------------------------------
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-------------------------------------------------------------CAGCTCAGTCTCTAGAATA
CAAAGTAGTCATCTTGCATGGAACTAACAAGGATGTGCCTTTGGAGACCCTTCTGCAAAGAC------------------
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--------------------------------------------------------------------------------
----------AAGATCAATTGACAATGCAATCGACAACATATCCTCGGGAAACAATCATGGACATCTCATGTTTTTCAGG
TCCTATTGTCTATATAGATGCAACATGGGGTCCAGGATTTCAAGATCAGCTGACTATAGCAGGTATAGGTATATTCATAC
AGTCTGCAGGCGGGCGACGATGTTCTCAGCCGTGCATCTCGGCTATCTCTCCACCGACGACATCAGCTATCCAGGCCGAA
GCATTTAGCATGATGCTAGCATACAAGATTGCGGAGCGGCTTCAGATTCAACAGGGAACATTTCTAAAGGACAACATGAT
TCTGGCGAATGCTATAGCGCCCAGCAAGCCCATTCTTGCTCCAGGTCATTGGACTATAAGGCCACAAGTTACATGCATAA
CAGCTTCCTCAGCCTTTGATGCTACAAGAATTTATCATATCAATAGGAGCTACAACTTTCGAGCACATCACCAAGCTAGA
TTAGCAATCAAAACTCAAAATTTTCCTTCCAGGTTCGCATGTGTTAGGTTCATGAAATGG-TTCCTGCCTTAATGCAGTA
CTAGCTGCACTTTCGTCAGAACTGC---AATGCAAGGTTGTACTTGTATATATGATGTTGTTAATCAATCAAATTCCGTG
GGTTTAAAGTAAAA------------------------------------------------------------------
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>chr7B_791
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-------------------------------------------------------------CAGCTCAGTATCCGGACTA
CAAAGTAGTCAACTTGCCTGGAACTAACAAGGTTGTGCTTGCAGAGACCCTTATGCAAAAAT------------------
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----------AGGATCAATTGACAATACAATCGACACCATCTCCTGGGAAAACAATCATGGACATCTCATGTTTTTCAGG
TCCCATTGTCTATACAGATGTAGCGTGGAGTCCAGG-------------------------GGTTTAGGCATAGTTATAC
AGTTTGCAGGCGATCGACAGTGTTCACAGTCGTGCATCTCGGTTGTCTCTCCATCGACGACATCAGCTATCCAGGCCAAA
GCAATTAGCATGATATTAGCATACAAGACTGCGGGGTTGCTTCAGATTCAACAGG-AACATTTCTGATGGACAATACCGT
TCTGGCGAAAGCTATAGCGGCCAGCAAGTCCATTCGTGCTCCTGGTCATTTGACTATAAGGCCACAACTTGCATGCATAA
CAGCTCCTTTAGCCTTTGATGGTACAAGAATTTATCATATCAATAGGAGCTACAACTT----------------------
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>chr3D_844
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----------------------------------GTGCATGAGGAGGCCCTTTTGCAAAGACGGGATCACTTGAGAATGC
AATTGATACCATCTCCTGGGGAAACAATCATGGACATCTCATCTTTTCGGGTACCATTGTTTATACAGATGCAGCCTGGA
GTCCAGGACTTGAAGATCAGCCAATTGCAGCAAGTTTAAGTATATTTATACAGGTTGCAGGAAATCAACATTATTCACAG
TTGTCCATCTCGGCAGTCAGTGAGACTACAAAGTAGTCAACTCGACTGGAACTGACAAAGCAGTGCATGAGGAGGCCCTT
TTGCAAAGCCAGGATCACTTGAGAATGCAATTGATACCATCTCCTAGGGAAACAATCATGGACATCTCATCTTTTTCAGG
TACCATTGTTTATACAGATCAGCCA---------------------------ACTGTAGCAGGTTTAGGTACATTTATAC
AGTTTGCAGGAAAACAACAGTGTTCATAACTGTGCATCTGGGCCGTCTCCCCACCGACGACATCAGCTATCCAAGCCAA-
--------------------------------------------------------------------------------
----------------------AGCAAGCCCATTCTTGCTCCAGGTCATTGGACACTAAGGCCACAGCTTGCATGCATAA
CAGCTTATTTAGCCTTTGATGCTACAAGAATTTATCATATCAATAGGAGCTACAACTTCCGATCACA-CACCAAGTTAGA
TTAGCAATCAGAAGTCAAAACTTTTCTTACAAGTTTAAATGT-TTAGGTTCGGGCAATGGTTTCTTGCCTTAATGCAGCA
GCAGTTGAACTTTCTTTTGTTCTGC---AATGTAAGGTTCTACATGTGC----GATGCTGCTAATCTATGAAATTATTTG
AGTTCAAAAAAAAAA-----------------------------------------------------------------
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>chr7D_1439
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---------------------CCCGCGTCGACGGTGACAGCGCATGGCAGCGGCAAACTCCAGC-AAGCCGCGGTCCAGC
CTGAGCCCGAGCCTAGCCAAGCCGGGCCAGGAAGATCGGATCATTGAACCGCCGGTCTGGTCCCAGGCCGACTTGCTCCT
GGCGGTCTAAAGGACAGCTCAGTAAGGGAACGCACCTGACCTGACTGTGTCCATCCTTAATATACTGACCCATAATGGTC
CCGTCATCCTACTTTACCTAGACAAA-TGGAGTGGTTGATGAG---------------------------CTGAAGATGG
CAGGACTCGGTGCCAAGCAAGTATGTCTTCCAACATGCAGGCCGGCAGAGGGTGGTTGTTGACGGGAACCTATCGATCAG
TTAAATCTAATT-GTAAAGTTGGCAGGATGTGTAGCTAAGAGACGAGGTAGCAGGTTGGAAGGGATTGGATTTAGAA-TT
CACAATGCCATCATCGTAGAAAATGTAACCAGACTGCAACGGTATAATGTTTCTAGGAAGCTTCCTGTGCCTTTCCAGCA
TAGTTTTAAATAGCCGGCTATAGCTCGCTATAGCCCGCTATATAGCCTTTTCAGCAGGGTGCCGTTAAATGGTCGCCTTC
ACAAATAGCCTGCTATAGCCCGCTATATGTCTGCTATAGCTCCGCTATACCTGGTTTGAAGGCCCTCCGCTACTTTTCCA
TAGTCTGCTATTTAAAACATTGCTTTCCAGCAAGTTGGAGCCGGCCTACGTATTTTCTGTCAACTTCCGGAGCAATTTCC
AGCCGTT-TTGTGCTATATGGCTA-TTTATGTAGCTCCTTCATCTCTATCTTGACTCCACGGTCTACACTCTACACCCGG
ATCGATTCACCTGTGAAAGTGAGACACATTGTGAAGACACAT--AAAGCCCTGATGACCGTAAAATTGATCTATACCATA
CCTCATTGTGCAGCCATGGAGGGA---------AACGCCAAAGGAGGTGACATAGTTCGGCAAACCGTAGCATGCTGCTT
GCACAGGAAGAATTCCAGCAAGCGAGGATGGGACATTCTCTAGCAATAATGCAATATAGAGTGCGAGGGAGGATGAGAAA
TCTGGTTTGGAAACTGATATTTGTTTTCTCAAGCTATA-TTTTTGCCCTGCAGATGCCCTTTA--
>chr7D_1581
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---GGCCTAAAGGACAGCTCGGTCAGGGAACGGATCTGACCTGATCGTGTCCATCCTTA--ATACTGACCCATAATGGTC
CCGTCATCCTACTTTAACTACACAAAATGGAGTGGTTGATGAGAGTTAGGTCATCAATTAGGTTGACGAGCTGAAGATGG
CAGGACTCGGTGCTAAGCAAGTATGTCTTCTTCCGTGCAGGCCGGCAGAGGGTGGTTGATGAGGGGAGCTTATCGATCAG
TTAAATCTAATT-GAAAAGTTGGCAGGATGTGTAGCTAAGAGACGAGGTAGCAGGTTGGAAGGGATTGGATTTAGAA-TA
TACATCGCCATCATCGTAGAAAATGTAACCAAATTACAATGGCATAATGTTTCTAGGAAGCTTCCTGCGCCTTTC-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TCACAAAGTCCCAAC-----------------------TCCGGAGCAATTTCC
AGTTGTTCTTGTGCTATATGCCTATTTTATGTAACTCCTTCATGTGTATCTTGACTCCACGGCCTAACGTT------CAG
ACCGACTCACCTATGAAGATGTGACACATTATGAAGACACATATAGAACTCTGATGACCGTAAAATTGATCTATACCATA
CCTCATTGTGCAGCTGGAGAGAAATGCCGACAGAACCACAAAGAACCTTACAGAGTTCA---------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr4A_1750
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---------------AGCAAGCAGGTCTTCTTCCGTGCAGGCCGGCAG-GGGTGGTTGATGAGGAGAGCTTATCGATCAA
CTAAAACTAATCCGTATAGTTGGCAGGATATGTAGCAAAGAGACGAGGTAGCAGGTTGGAAGGGATTGGATTTAGAA-CA
TACATCGCCATCATTGTAGAAAATGTAACCAAATTACAATGGCATAATGTTTCTAGGAAGCTTCGCGGGCCTTTC-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TCGCAAGTCAAAGCCCCTATGTA---TTTCTGTCAACTTTCTGAGCAATTTCC
ACC------------------CTA-TTTATGTAGCTCCTTCATCTGTATCTTGAGTCCACTGTCT-------ACGCTCAC
ATCGATTCACCTGTGAAGGTGAGACACATTATGAAGATACAT--AGAACTCTGATGACCGTAAATTTGATCTATACCATA
CCTCCTTGTGCAGCTGCAAAGGGACGCCTATAGAACACCAACGAAGGTTACGGAGTTCAGCAAACAGTGGCATGCTGCTT
GCACAGGAACAATTCCTGCAA-----------------------------------------------------------
-----------------------------------------------------------------
>chr4A_1758
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-----------------------TGTCTTCTTCCATGCAGGCCGGGAGAGGGTGGTTGATGAGGGGAACCTATCGATCAG
TTAAATCTAATT-GTAAAGTTGGCAGGATGTGTAGCTAAGAGACGAGGTAGCAGGTTGGAAGGGATTGGATTTAGAA-TT
CACAATGCCATCATCGTAGAAAATGTAACCAGACTGCAATGGTATAATGTTTCTAGGAAGCTTCCTGTGCCTTTC-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CAGCAAGTCGGAGCCGGCCTACGTATTTTCTATCAATTTCCGGAGAAATTTCC
AGC------------------CG-TTTTATGTAGCTCCTTCATATCTATCTTGACTCCACGGTCT-------ACACCCAG
AACGATTCACCTGTGAAAGTGAGACA--TTGTGAAGAAACAT--AGAACACTGATGACTGTAAATTTGATCTATACCATA
CCTCATTGTGAAGCTGGAGAGAAACGCCTATAGAACCTCAAAGAAGGTTACAGAGTTCAGCAAACAGTAGCATGCTGCTT
GCACAGGAAGAATTCCAGCAAGTGAGGATGGGACATTCTCTAGCAATATA----TATAGAGTGAGAGCAAGGACGG-ACA
TCTGGTTTGGAAACTGATATTTGTTTCCTCAAGCTATAATTTTTGCCCTACAGATGCTCGTTA--
>SNPs
------------------------------------------------------------S-------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------S---------------------S-
-----------------------------------------------S--------------------------------
------------------------------------------S-------S--------------------------S--
-----------------------------S-----S--------------------------------------------
---------------------------------------------S-----------------------S----------
-----------------------S-------------------------------------------------------S
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----S----------S----------------S--------S----------------------
--------------------------------------------------S----------------S-----S------
--------------------------------------S-----------------------------------------
-----------S--------------------------------S-------------S--------S------------
----------------------SS-----S--------------------------------------------------
-------------------------SSS-----------------------------------------------S----
---------------SSSSSS-------S-----S----------------S------------S---------------
-S------S-------------S----------S---S--S----SSS---S-----S----S-------S--S-S----
-------------------S------S----------------------------S------------------------
----------------------------------------------S-----S---------------------------
---------------------------S--------------------------------------------------S-
--------------------------------------------S-----------------------------S--S--
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S--------------SSSSS--------S-----------------------
------------------S--S------------------SS--------S--S-----S--------------------
---------------S----------------------------S------------------------------S----
-------------S-------------------------------S----------------------------------
-----------------------SSS-------------------------SSS------S---S--S------------
------------------------------S--------------------------------SS
>forward_1375
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------GGTAC
AGTTTGCAGGCGATG-----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_2285
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------CAGGTAGCAGGTTGGAAGGG----------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------
