>input_sequence_82299
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---------------------------------------------------------ATGGAACCACGTCAGCCCGAGCT
CGAGAAGTCCAGCGCTGCCACCGT---GGACGAGGTGCTAAAGCCGGTGGAGGCGCCATCGGACGGTGAAGGATGCCCCA
TATGCTTGGATCAAGAGGGGGCAACGGCCGTGTGGAAGGAGACAGTGTGGGGGCACATCTTCCATGGGCGATGCGTGGAG
AGGTGGCTCCAGACGAAGGGAAGTTGCCCCATGTGTCGGCGACAGCTTCAACAACCACGTGCTCCTGCAAAACCAGATGT
TCGATATCGTAGCCCCCTCATATTTTTGGCGATGGAATTGGAAGACAACTCTCCTCTTTCAAATCGTACTAACTATTTTA
GACAATACAGGGAGGAGACTTTTGTTGGATGA------------------------------------------------
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>chr3B_1_TraesCS3B01G152500
CTGTTGTGCAAAATTACGGCCTAACTTTACTGGGCAGAATTATGGCCTAACTTCACTGTACACTTGCAATCTTTCTCCTG
CATGATCTACCAAATGGTGTTAAAATTTACTGGGCAGAATTATAGACTGATTAGATTTTGCAACTTTGGGGAATAAGTGA
TATGTTCAAAT------AAGTTAAAGATGCAATCTGAGTATTAACATTATGAAGTTTTG-----------AACAGGTCAG
GATGGCAAACCTAGGGAGTTC-AGGCACCATGAAACATAACT--------------TCCTTTGCCATCGGAGAGAAAGAA
GACGGTAGGCGCGCTCAGGAGATGACGCAGCAACAACCGTCGAGCGGAGGTTGTGTTTG---------------------
-----GAGGC-------------------------------GACCAGCAGAGGCTGCAGCTCCCACAGCTCGCGTGCGAA
CGATGTGGCCGGACGACGATTGAAGCGGCGTTTCTGTTTTGGCGGCGTGCTTTCGCGTGTGGATGGAGCTCGTACGCCAG
GAAGAACTGGC------GTCTTGATGGAGCTCGTACGCCAGGAAGAACTGGCGTTCGTTGGCGGGTCGAAGAAGTTTGAT
TTTTGGTCGATGGACCTCGTCCTCGTTCGTGGGTTGCGGAGCTGTTTTT-TTGTTGACTGGGCGCGATCGTGGGGTTCCA
TGGACTTATCGTTCGTGTGTTGAACTGTGGATCTCGTACGTGGGCTGAGTTGTTGT------------------------
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----------ATTTTTTTTTGCGGGCGCTGAGTTGGTGTTTTTTCGTACGTGGGCT------------------------
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-------------------ATGTTGGTGGGCTGCTGCGTGCGTGTGGGAGTTCGAAGGGAGGGGGATCGAACGAGGTCGA
ACCATCACGACGTTCGATCCCCCTTTAATAGTAGAGATATATGCAACACAAACGCCCTCCCAAC---ACAACCGAAGAAC
CACAGGAGCCAGCTTCACTTTTCGCCGTCGGAACTTAGATTCTCCGGTAACACTGAAAACACAAGTCAGCGATCGATCAG
CCGTCTGGGAACT-TGCCGTAGCGCCGTGTTTTGGTAGCGTGGAGAGTGCTTCTGCCATGGAACCACGTCAGCCCGAGCT
CGAGAAGTCCAGCGCTGCCACCGT---GGACGAGGTGCTAAAGCCGGTGGAGGCGCCATCGGACGGTGAAGGATGCCCCA
TATGCTTGGATCAAGAGGGGGCAACGGCCGTGTGGAAGGAGACAGTGTGGGGGCACATCTTCCATGGGCGATGCGTGGAG
AGGTGGCTCCAGACGAAGGGAAGTTGCCCCATGTGTCGGCGACAGCTTCAACAACCACGTGCTCCTGCAAAACCAGATGT
TCGATATCGTAGCCCCCTCATATTTTTGGCGATGGAATTGGAAGACAACTCTCCTCTTTCAAATCGTACTAACTATTTTA
GACAATACAGGGAGGAGACTTTTGTTGGATGATGAGACAATGTCGACAACACATGCAACGATTTTTGTACTTTTTTTTAG
ACTATCGGA-----------------------------------------------------------------------
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--------------------------------TGTACTTATTGTGGATGTACATACAAAAACATTAGTAAGAG-TTTCAT
ATATTTGTTCATATGAATATTCTCTCTATCAAAGAAATATAAACATATATAGTCCGCATATCCATTTG------------
---------------TTATAGCCGGGCAAGCGTCCTTTTTCTATAAAAAATGAACAAGAGATTGTA--AAGAACTCTGCA
ATTATATTTGTCAAAACAAACAGTT-CAGTTCAAACTATGGCGCGTGATTTCGCATGCACTGGAATGGTTTGTCTTTTC-
TAGTTTTCTCTCAAAACTGGCTTTCATCATTACTTTCCTTTTAGAAAAATCAAAGGGGTTTCCCG--CCCCAACTTTTTA
TTGAAAAAGTCAAGGCCACAACATCCAACCCACAAAAACACTTAAACAGCT----------------------CTGCAGC
AGAATTATTACAGGTAAGCACTTCTAACAGCGTTTCAACCTGATCAATACAAGTGAATAGCATCAATGTCAAGCTATCCT
AAGGAGCTCCCCATGTC-GACGATCAAGGCAGAAGACATTCGAGCAGCCACGGAGCTTGAGTACCGACGCACAACACCTT
TTAGGAACGAACCAGAGAATCTACTAAAGCCATAATGCA-TTCAAGCTTCATCACTTTCAC-CCATGGAAGACAATGTCA
TTTCGCAAAAGCCATAA-GCCCCACAAGGTATCAGTAGATAATATATTAATTACTTCATCATTTTTTCGTTGCTTCCAAA
AGGTAGCAAGGTCAGAAAATGAACAAGGTACAGGGAAATCAACTATCTCAGCAATTGCACCCTAGATATAAACAAAACAC
AAACCAAAGTACATGGACGGGCAATACAAGGTAGATTTGCAGCCCTCTTATAAAACAAATCTCAGGATAACCGGACACCA
TAACCACGCGTGACTATGATGTCAAGTACTAACGCAGGAAGGTCTCAATACAATGCCACGACACACACTAGGATA-----
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>chr3B_1
CTGTTGTGCAAAATTACGGCCTAACTTTACTGGGCAGAATTATGGCCTAACTTCACTGTACACTTGCAATCTTTCTCCTG
CATGATCTACCAAATGGTGTTAAAATTTACTGGGCAGAATTATAGACTGATTAGATTTTGCAACTTTGGGGAATAAGTGA
TATGTTCAAAT------AAGTTAAAGATGCAATCTGAGTATTAACATTATGAAGTTTTG-----------AACAGGTCAG
GATGGCAAACCTAGGGAGTTC-AGGCACCATGAAACATAACT--------------TCCTTTGCCATCGGAGAGAAAGAA
GACGGTAGGCGCGCTCAGGAGATGACGCAGCAACAACCGTCGAGCGGAGGTTGTGTTTG---------------------
-----GAGGC-------------------------------GACCAGCAGAGGCTGCAGCTCCCACAGCTCGCGTGCGAA
CGATGTGGCCGGACGACGATTGAAGCGGCGTTTCTGTTTTGGCGGCGTGCTTTCGCGTGTGGATGGAGCTCGTACGCCAG
GAAGAACTGGC------GTCTTGATGGAGCTCGTACGCCAGGAAGAACTGGCGTTCGTTGGCGGGTCGAAGAAGTTTGAT
TTTTGGTCGATGGACCTCGTCCTCGTTCGTGGGTTGCGGAGCTGTTTTT-TTGTTGACTGGGCGCGATCGTGGGGTTCCA
TGGACTTATCGTTCGTGTGTTGAACTGTGGATCTCGTACGTGGGCTGAGTTGTTGTATTTTTTTTTGCGGGCGCTGAGTT
GGTGTTTTTTCGTACGTGGGCTATGTTGGTGGGCTGCTATGTTGGTGGGCTGCTGCGTGCGTGTGGGAGTTCGAAGGGAG
GGGGATCGAACGAGGTCGAACCATCACGACGTTCGATCCCGCTTTAATAGTAGAGATTCGGGCATATGACGTCCAAATGA
GGCATGTGATTGTAATATGATGTGTTTGTGAAATGCGAGCAGTAGCCTTGTGATTTTGATAGCTCGGTGATGGCGGGCGA
AGCCACCAAGCATCGACACACATCCTAACCAATTTGATTTGGTGTCATCTTGGATCTGACTAATGGATTAATATTCTTGT
AGGTTGATTTGAATCCCCGGGTATGTGGTTATGCATGAGCTGTGGAAGCAAAGGTGTGTGTCGGCTGGTTATGCATGAGC
TGTGGAAGCAAAGGTGTGTGTCGGCTGGAGCTGATTTACGGGGCTGTCATTTGGATGGTACCAAACTGTAATAATACAGA
CTCCCACTCAAAATTTCACTGCACCAAAGGCTCTCGTAAGTGCTTGACTTTGTTTCTTCATACTACGTGATATAATACAT
ATTGTCTGTACTGGATTGCCAAAATTAGATTTATTTGTTTCTCTCTCCTGAATTTTTTGCATCGTCCTCCATACAAAAAC
ATGGTGGGATTTGGTCCAGGTGACAACATACAAGACCGTAACAATCAGCCTGTTTTAATTTACTGAAACTGGGTAGATGC
TAGATAGAGACGTCATTATCCTTGGTGGTAGATTGGAAGCTTGCTACATGTTTTTCTCAATGGGCATACCTGCTGTTATC
TTGCCAAAGCCCAAGTTTATACAATTTGCTTCTCTAACTACAATGTCAGTACATTATGCTAGGTATGTGCCTCTTTAGTT
GCCTCTTTCTGCTTTGTTCTGTGTTTTCTGTTTAGTTATGGGTTGCCTTACTGTTGTGCAAAATTATGGCCTAACTTTAC
TGGGCAGAATTATGGCCTAACTTCACTGTACACTTGCAATCTTTCTCCTGCATGATCTACCAAATGGTGTTAAAATTTAC
TGGGCAGAATTATAGACTGATTAGATTTTGCAACTTTGGGGAATAAGTGATATGTTCAAATAAGTTAAAGATGCAATCTG
AGTATTAACATTATGAAGTTTTGAACAGGTCAGGATGGCAAACCTAGGGAGTTCAGGCACCATGAAACATAACTTCCTTT
GCCATCGGAGAGAAAGAAGACGGTAGGCGCGCTCAGGAGATGACGCAGCAACAACCGTCGAGCGGAGGTTGTGTTTGGAG
GCGACCAGCAGAGGCTGCAGCTCCCACAGCTCGCGTGCGAACGATGTGGCCGGACGACGATTGAAGCGGCGTTTCTGTTT
TGGCGGCGTGCTTTCGCGTGTGGATGGAGCTCGTACGCCAGGAAGAACTGGCGTCTTGATGGAGCTCGTACGCCAGGAAG
AACTGGCGTTCGTTGGCGGGTCGAAGAAGTTTGATTTTTGGTCGATGGACCTCGTCCTCGTTCGTGGGTTGCGGAGCTGT
TTTTTTGTTGACTGGGCGCGATCGTGGGGTTCCATGGACTTATCGTTCGTGTGTTGAACTGTGGATCTCGTACGTGGGCT
GAGTTGTTGTATTTTTTTTTGCGGGCGCTGAGTTGGTGTTTTTTCGTACGTGGGCT------------------------
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-------------------ATGTTGGTGGGCTGCTGCGTGCGTGTGGGAGTTCGAAGGGAGGGGGATCGAACGAGGTCGA
ACCATCACGACGTTCGATCCCCCTTTAATAGTAGAGAT------------------------------------------
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>chr6B_1
CTGTTGTGCAAAATTATGGCCTAACCTTACTGGGCAGAATTATGGCCTAACTTCACTGTACACTTGCAATCTTTCTCCTG
CATGATCTACCAAATGGTGTTAAAATTTACTGGGCAGAATTATAGACTGATTAGATTTTGCAACTTTGGGGAATAAGTGA
TATGTTCAAAT------AAGTTAAAGATGCAATCTGAGTATTAACATTATGAAGTTTTG-----------AACAGGTCAG
GATGGCAAACCTAGGGAGTTC-AGGCACCATGAAACATAACT--------------TCCTTTGCCATCGGAGAGAAAGAA
GACGGTAGGCGCGCTCAGGAGATGACGCAGCAACAACCGTCGAGCGGAGGTTGTGTTTG---------------------
-----GAGGC-------------------------------GACCAGCAGAGGCTGCAGCTCCCACAGCTCGCGTGCGAA
CGATGTGGCCGGACGACGATTGAAGCGGCGTTTCTGTTTTGGCGGCGTGCTTTCGCGTGTGGATGGAGCTCGTACGCCAG
GAAGAACTGGC------GTCTTGATGGAGCTCGTACGCCAGGAAGAACTGGCGTTCGTTGGCGGGTCGAAGAAGTTTGAT
TTTTGGTCGATGGACCTCGTCCTCGTTCGTGGGTTGCGGAGCTGTTTTT-TTGTTGACTGGGCGCGATCGTGGGGTTCCA
TGGACTTATCGTTCGTGTGTTGAACTGTGGATCTCGTACGTGGGCTGAGTTGTTGT------------------------
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----------ATTTTTTTTTGCGGGCGCTGAGTTGGTGTTTTTTCGTACGTGGGCTAT----------------GTTGGT
GGGCTGCTGCGTGCGTGTGGGAGTTCGA------AGGGAGGGGGATCGAACGAGGTCGAACCATCACGACGTTCGATCCC
CCTTTAATAGTAGAGATTCTCAATGGGCATACCTGCTGTTATCTTGCCAAAGCCCAAGTTTATACAATTTGCTTCTCTAA
CTACAATGTCAGTACATTATGCTAGGTATGTGCCTCTTTAGTTGCCTCTTTCTGCTTTGTTCTGTGTTTTCTGTTTAGTT
ATGGGGTGCCTTACTGTTGTGCAAAATTATGGCCTAACTTTACTGGGCAGAATTATGGCCTAACTTCACTGTACACTTGC
AATCTTTCTCCTGCATGATCTACCAAATGGTGTTAAAATTTACTGGGCAGAATTATAGACTGATTAGATTTTGCAACTTT
GGGGAATAAGTGATATGTTCAAATAAGTTAAAGATGCAATCTGAGTATTAACATTATGAAGTTTTGAACAGGTCAGGATG
GCAAACCTAGGGAGTTCAGGCACCATGAAACATAACTTCCTTTGCCATCGGAGAGAAAGAAGACGGTAGGCGCGCTCAGG
AGATGACGCAGCAACAACCGTCGAGCGGAGGTTGTGTTTGGAGGCGACCAGCAGAGGCTGCAGCTCCCACAGCTCGCGTG
CGAACGATGTGGCCGGACGACGATTGAAGCGGCGTTTCTGTTTTGGCGGCGTGCTTTCACGTGTGGATGGAGCTCGTACG
CCAGGAAGAACTGGCGTCTTGATGGAGCTCGTACGCCAGGAAGAACTGGCGTTCGTTGGCGGGTCGAAGAAGTTTGATTT
TTGGTCGATGGACCTCGTCCTCGTTCGTGGGTTGCGGAGCTGTTTTTTTGTTGACTGGGCGCGATCGTGGGGTTCCATGG
ACTTATCGTTCGTGTGTTGAACTGTGGATCTCGTACGTGGGCTGAGTTGTTGTATTTTTTTTTGCGGGCGCTGAGTTGGT
GTTTTTTCGTACGTGGGCTATGTTGGTGGGCTGCTGCGTGCGTGTGGGAGTTCGAAGGGAGGGGGATCGAACGAGGTCGA
ACCATCACGACGTTCGGTCCCGCTTTAATAGTAGAGAT------------------------------------------
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>chr5B_1
CTGTTGTGCAAAATTATGGCCTAACTTTACTGGGCAGAATTATGGCCTAACTTCACTGTACACTTGCAATCTTTCTCCTG
CATGATCTACCAAATGGTGTTAAAATTTACTGGGCAGAATTATAGACTGATTAGATTTTGCAACTTTGGGGAATAAGTGA
TATGTTCAAAT------AAGTTAAAGATGCAATCTGAGTATTAACATTATGAAGTTTTG-----------AACAGGTCAG
GATGGCAAACCTAGGGAGTTC-AGGCACCATGAAACATAACT--------------TCCTTTGCCATCGGAGAGAAAGAA
GACGGTAGGCGCGCTCAGGAGATGACGCAGCAACAACCGTCGAGCGGAGGTTGTGTTTG---------------------
-----GAGGC-------------------------------GACCAGCAGAGGCTGCAGCTCCCACAGCTCGCGTGCGAA
CGATGTGGCCGGACGACGATTGAAGCGGCGTTTCTGTTTTGGCGGCGTGCTTTCGCGTGTGGATGGAGCTCGTACGCCAG
GAAGAACTGGC------GTCTTGATGGAGCTCGTACGCCAGGAAGAACTGGCGTTCGTTGGCGGGTCGAAGAAGTTTGAT
TTTTGGTCGATGGACCTCGTCCTCGTTCGTGGGTTGCGGAGCTGTTTTT-TTGTTGACTGGGCGCGATCGTGGGGTTCCA
TGGACTTATGGTTCGTGTGTTGAACTGTGGATCTCGTACGTGGGCTGAGTTGTTGT------------------------
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----------ATTTTTTTTTGTGGGCGCTGAGTTGGTGTTTTTTCGTACGTGGGCTAT----------------GTTGGT
GGGCTGCTGCGTGCGTGTGGGAGTTCGA------AGGGAGGGGGATCGAACGAGGTCGAACCATCACGACGTTCGATCCC
CCTTTAATAGTAGAGAT---------------------------------------------------------------
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>chr3A_122
ATAACTC-------------------------------------------------------------------------
-------------------------------------------------ATTAGATTTTGTAACTTTGGGGAATAAGTGC
TAATGTAGTTGGAGTAAAAGTTAAAGATGCAATCTGAGTACTAACATTATGAAGTTTTG-----------AACAGGTCAG
GATGGCAAACCTAGGGCGTGATGGGCACCATGAAACATAACAAAGGTGGATATCCGTCCTTTGCCGTCGGAGAGGAAGAA
GACGGTAGGCAGGCTCTGGAGATGACGCAGCAACAGCCGTCGAGCGGAGGTTGTGTTTGGACGCCCTGGTTGTGGTTCGG
CATGCGAGGC-------------------------------GATCAGCAAAGGCTGCAACTCCCACAGCTCGCGTGCGAA
CAATGTGGCCGGGCGACGATTGAAGCGGCGTTTCTGTTTTGGCGGCGTGCGTTCGTGTGTGGATGGAGCTCGTATGCCAG
GAAGAATTGGC------GTCTCGATGGAGCTCATACGCCAGGAAGAACTGGCGTTCGTTGGCGGGTCGAAGAAGTTTTAT
TTTTGGTCGATGGACCTCGTCCTCGTTCGTGGGTTGCGGAGCTGTTTTT-TTATTGACTGGGCGCGATCATGGGGTTCCA
TGGACTTGTCGTTCGTGTGTAGAACTGTGGATCTCGTACGTGGGCTGAGTTGGTGAATATT-------------------
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------------TTTTGTTTGCGGGCGCTGAGTTGGTGATTCTTCGTACGTGGGCTGA----------------GTTGGT
GGGCTGCTGCGTGCGTGTGGGAGTT-------------------------------------------------------
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>chr3A_172
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-----------------AAGTTAAAGATGCAATCTGAGTACTAACATTATGAAGTTACTTTGCTTGCTGAAACAGGTCAG
GATGGCAAACCTAGGGAGTTC-GGGCACCATGAAACATAACAAAGGTGGATATCCGTCCTTTGTCGTCGGAGAGGAAGAA
GACGGTAGGCGGGCTCAGGAGATGACGCAGCAATAGTCGTCGAGCGGAGGTTGTGTTTG---------------------
-----GACGCCCTGGTTGTGGTTCGGCATGCGAGGTTGCGAGATCAGCAGAGGCTGCAGCTCCCACAGCTCGCGTGCGAA
CGATGTGGC---------------------------------CGGCGTGCGTTCACGTGTGGATGGAGCTCGGACGCCAG
GAAGAACTGGC------GTCTTGATGGAGATCGTACGCCAGGAAGAACTGGCGTTCGCTGGCGGGTCGAAGAAGTTTGAT
TTTTGGTCGATGGACCACGTCCTCGTTCGTGGGTTGCGGAGCTGTTTTT-T-ATTGACTGGGCGCGATCGTGGGGTTCCA
CGGACTTCTT-------------------------GTACGTGGGCTGA--------------------------------
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------------TTTTTTTTGTGGGCGCTGAGTTGGTGATTTTTCGTACGTAGGCTGA----------------GTTAGT
GGGCTGCTGCGTGCGTGTGGGAGAGTGGGGATCGAGGGAGGGGGGTCGAACGAGGTCGAACCATCACGACGTTCGATCCC
CCATTAATAGTAGAGAT---------------------------------------------------------------
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>chrUn_181
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--------------------------ATGCAATCTGAGTATTAACATTATGAAGTTTTG-----------AACAGGTCAG
GATGGCAAACCTAGGGAGTTC-AGGCACCATGAAACATAACT--------------TCCTTTGCCATCGGAGAGAAAGAA
GACGGTAGGCGCGCTCAGGAGATGACGCAGCAACAACCGTCGAGCGGAGGTTGTGTTTG---------------------
-----GAGGC-------------------------------GACCAGCAGAGGCTGCAGCTCCCACAGCTCGCGTGCGAA
CGATGTGGCCGGACGACGATTGAAGCGGCGTTTCTGTTTTGGCGGCGTGCTTTCGCGTGTGGATGGAGCTCGTACGCCAG
GAAGAACTGGC------GTCTTGATGGAGCTCGTACGCCAGGAAGAACTGGCGTTCGTTGGCGGGTCGAAGAAGTTTGAT
TTTTGGTCGATGGACCTCGTCCTCGTTCGTGGGTTGCGGAGCTGTTTTT-TTGTTGACTGGGCGCGATCGTGGGGTTCCA
TGGACTTATCGTTCGTGTGTTGAACTGTGGATCTCGTACGTGGGCTGAGTTGTTGT------------------------
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----------ATTTTTTTTTGCGGGCGCTGAGTTGGTGTTTTTTCGTACGTGGGCTATGTTGGTGGGCTGCTATGTTGGT
GGGCTGCTGCGTGCGTGTGGGAGTTCGA------AGGGAGGGGGATCGAACGAGGTCGAACCATCACGACGTTCGATCCC
GCTTTAATAGTAGAGAT---------------------------------------------------------------
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>chr6B_214
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----------------------------------------------------------------------AACAAGTCAG
GACGGCAAACCTAGGGAGTTC-GGGCACCATGAAACATAACAAAGGTGGATATCCGTCCTTTGCCGTCGGCGAGGAAGAA
GACGGTAGGCGGGCTCAGGAGATGACGCACCAATAGCCGTCGAGCGGAGTTTGTGTTTGGACGCCCTGGTTGTGGTTCGG
CATGCGAGGC-------------------------------GATCAACAGAGGCTGCAGCTCCAATAGCTCGCATGCGAA
TGATGTGGCAGGACGACAATTGAAGCGACGTTTCTATTTTGGCGGCATGCGTTCGCGTGTCGATGGAGCTCGTACGCCAG
GAAGAACTGGCCCTGGCGTCTTGATGGAGCTCGTATGCTAGGAAGAACTGGCGTTCGTTGGCGGGTCAAAGAAGTTTGAT
TTTTGGTCCATGGACCTCGTCCTCGTTCGTGGGTTGCAGAGCTATTTTTTT-ATTTACTCGGCGCGATCATGGGGTTCCA
TGGACTTCTCATACGTGTGTTGGACTGTGGATCTCATACGTGGGCTGAGTTGGTGAATA---------------------
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--------------TTTTTTGCGGGCGTTGAGTTGGTGATGTTTCGTACGTGGGCTGA----------------GTTGGT
GGGCTGCTGCGTGCGTGTGGGAGTTCGA------AGGGAGGGGGATTGAACGACGTCGAACCATCATGAGGTTCAATCCC
CCTTTAATAGTGGAGATA--------------------------------------------------------------
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>chr3B_824
ATATATGCA-----------------------------------------------------------------------
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--------------------------------------------AACCCAAACGCCCTCCCAAC---AGAACCAAAGAAC
CACAGGAGCCAGCTTCACTTTTCGCCGTCGGAAATTAGATTCTCCGGTAACACTGAAAACACAAGTCAGCAATCGATCAG
CCGTCTAGGAACT-CGCCGTATTGCCATGTTTTGGTAGCGTGGAGAGTGCTTCTGCCATGGAACCACGTCAGCCCGAGCT
CGAGGAATCCCGCACTGCCACCGCGGCGGACGGGGTGTTAAAGCCGGTGGAGGCGCCATCGGACGGTGAAGGATGCCCCA
TATGTTTGGATCAAGAGGGAGCAACGACCGCGTGGAAGGAGACCGTGTGTGGGCACATCTTTCATGGAGGATGCGTGGAG
AGGTGGCTCCAGGTGAAGGGAAGTTGCCCCGTGTGCCTGCGACAGCTTCAACAACCACGTGCTCCTACCAAACCAGATGT
TCGATATCATAGCCCCTTCATCTTTATGGCGACGGAATTGGAAGACAACTCTCCTCTTCCAAATCGTACTAACTATTTTA
GACAATACAGGGAGGAGACGTTTGTTGGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCATTGACCAGAGTATGATTTGTGTACTAACTGTGGATGTACATGCGAGAACATCAGTGCGAGTTTTTAT
ATATTTGTTCATATGAATATTCTCTCTATCAAAGAAATATAAACATATATAATTTGCGTATCCATTCG------------
---------------TTA---------------------------GAAAATGAACAGGAGATTGTACGAAGAACTCTGCA
ATTATATTTGTTAAAACAAACAGTTGCAATTCAAACTATGGCCCATGATGTCGCATGCACTGAAATGGTTTGTCTTTTCC
TAGTTTTCTCTCAAAACAAACTTCTGCCCCAC---TTTTTTTTG---AATTAAAGGGCTTTCCCCCGTCCCAAATTTTTA
TTGAAAAAGCTAAGGCCACGGCATCCAACCCACAAAATAATT-------------ACCACAGCCGGACAGTAGCTGCAGC
AAAATTATTATAGGTAAGCCCTTCTAATAGCGTTTTAACCCGATCGATACAGGTGAATAACATCAATGCCGATCTATCCT
AAGGAGCTCCCCATGTC-GACGATCAAGGCAGAAGACATTCAAGGAGCCACGTAGCTTGAGTACCAACGCACAACACCTT
TCAGGAACGAACCAGAGAAACTACTAAAGTCAGGATGCACTTCAAGCTTCGCCACTTTCGCTCCTGGAAAGACAATGTCA
TTTCGCAAAAGCCATAA-GCCGCACAAGGTATCAGTAGAGAATATATTAATTACTTCATCAGTTTTTCCTTGCTTCCAAA
AGGTAGCATGGTCAGAAAAA-AACAAGGTACAAGGAAATAACCTATCTCATCAATTGCGTCCTAGATATAAATAAAGCAC
AAATCAAAGTACATGGCCGAACAGTACAAGGTAGATTTGCAGCCCTCGTATAAAGCAAATCTTGGGATAACCGGACACCA
CAACCACACACGACTACAATGTCAAGTACTAACACAGGAAGGTCCCAATACAATGCTACGACACACACTGGAATACCTAA
GCTC-ACGACAATGCCCTCTGAAGGGGAAAGGGTGCAAAGCGTCACCGATGTCGAGTACGAGACGGATGAGGGTCTTCAC
CCGGAACACTTAGTCGAACCACATAACAATGTCCTAAAGAGGAGAGTGACACCCCACGGGCACTGC------CATGCCAA
AGTGCGGAGCTTTCATTCGGCAGCTCACCCGTACCACCAGAA-GCACCTAGGACACCCGAGTTGAGCATAGACCTCATGT
CAATTAATGAATAGCCATTAGGATTAGCAAATGTCATTAGTAGTTGCATGTGTCCATTAACTAAACATGCATCTTTCCCC
ACAGACACATC--GTTTACGTACAATCGCCTCCTCTCCCCCTTTTCTCTCTTGTAATGTAGCTGACGGCCCTTGATGACG
TCATTTCATCTTGTATCTATAAGCACGTTCCTAAACGCAGGCGTCGAGATCGCACTTTATGACAGGGGTTGTCTTATCGT
GCCTGGGTGCAAGATATCCATGACGCTCTCGGACATGCAGCACCTGCTCGCTGACTGCCCCAACTCCCATGAGGTGTGGC
ATGAGGTGCTCTCATGGTGCCGCTCCATGGCCACTCTCCCGACGACGTTTTCTGAATGGTGGATCGTCTACCTGCTCGCA
TGCCCCCACCATGCATCGCTGAGGGCTTTCCTCCATTATCATGCTCACGTCCTAATCCGCTCGGAAGCACCGCAACGGAT
GCATCTTCGACAACCAACAGCCTTCCGTCTCCTCACTCCTTTACGAGCTCAAGGAGGAGGCGCTGTTATGGGCCAAAGCC
GGAGCCACCACGATAATGAACCTACTTCCCGAGATGTACCCCTCAAATAAAATGTTGGAGCTGAGCAAGCCCTTTTCCTC
TGCTCAGGTGCACTAGCGCATGCCATGTCAGGTACATGCTGCAAGATGCACCATCCCATGTAATTCTATTTCCTTTTTTT
TCAATGAAAAATACACAGCCTCTACGTATTGGCGAAAAAAAAGTCTAGAATTATTCGCTTGCTCCTGACTTCCGTTGATC
TCCACTTGCTCCTGAAACAGTAACTCCACTCTTCAAATAATTTCACCAACTCCCACCTAA-TTTTCTACCGCGCGCAGGT
TTTCACCTCGACGCCGGGATGGATAGTCGGTTAGGGCCATGGGGTCCACCCCGCCAACCTGGCACCTGGCAGCCGGCTAC
TTCGATTAACGACAAGAACACCGGGACGGGAAGGGACGTGGCACCGGAGACGCCGTCGGAAAAGATTTCGCAA-------
CACCGCGCGCGCGC-------------------------GAGAGAGATGGCTTCTGCGCTGCCGTGGAAGCCTCTCTTCT
GGGAGCGCTTTGAGGATTCGCGTGCCCTCGCCGCCGGCGCCCGCGGCGACCTCGCTGCTGCCA---------CCGCCACC
ATCGACCTCGCACTCGCATCGCCTCTGCGCGGTGGTGACGTCGACCGCGCTGTCTCGCTCATTGGAGAGTCGGCGGACAA
GCTTGCCGTGGCGGGCAAGCATCTTGCCATCCTGCTTTCTGGCCTTGGGACCGTCGAGCTCCTCGCGCGCCGATGGATCC
GCGGCGATGACTCTCTACGGCAGCAGGCCCGACCGAGGGCGCGCGAGGCCAGGGCA--GGCCGGCGCCGCCTACGACGAG
GTGGCAATCTCTCGCGGCCACCTGGGAGCCGCGGCACGTCTGGTTGCCCGAGGCGACCTCCCCGACATCTACTTCCGCGC
CGAGTTTCTCGCCGCCACCAGAGCCGCGGCGGCGGCCTCGGAGCACCTCCACGGGGTGGAGGACGCCCTGCGCATGCGCG
GCAACCTCGCGCCTCCACTTCTTCCCCTGCACCGGAGCATCCACCCCGACACGCGCTCGGCGGCGGAGGCGGCGCACCCC
AGCGCCAAGCGGAGGCGGCCAATCT---------------------CCTCCTCCTCCCCAGTCTCCAGCTTGGCCTCGGG
CCACGGTGGCAGTCCTGGGAGGGATCGCGCGCCGACGCCGGGCGCGCTGCCCTCGACCTCATGTGGTCGGCGTCCCCGTG
CTCGGCCCCCGACCTCATGTGGCCGCGGGACAATGTAGTGTGGCCTGGGACCGAATCACGCTCGTATGTTCAGGGACAAC
CCACTCCGTATACGTTCCTCAAAAAAAAACAATCCACTGCGTATACGTGGATCGTCCCTGAATCCTACTCGTCGATCGTT
AACCGTCTCCTACTCCCGTTGGCCAACTTTACTCTCCATATATGCAACACAAACGCCCTCCCAACACAACCAAAGAACCA
CAGGAGCCAGCTTCACTTTTCGCCGTCGGAACTTGATTCTCCGGTAACACTGAAAACACAAGTCAGCGATTGATCAGCCG
TCTGGGAACTTGCCGTAGCGCCGTGTTTTGGTAGCGTGGAGAGTGCTTCTGCAATGGAACCACGTCACCCCGAGCTCGAG
GAGTCCAGCACTGCCACCGTGGACGAGGTGCTAAAGCCGGTGGAGGCGCCATCGGACGGCGAAGGATGCCCCATATGCTT
GGATCAAGAGGGCGCAACGACCGTGTGGAAGGAGACAGTGTGTGGGCACATCTTCCGTGGGCGATGCATGGAGAGGTGGC
TCCAGGCGAAGGGAAGTTGCCCCATGTGTCGGCGACAGCTTCAAGAAACACGTGCTCCTGCAAAACCAGATGTTCGATAT
CGTAGCCCCTTCATTTTTATGGCGATGGAATTGGAAGACAACTCTCTTCTTTCAAATCATACTAACTATTTTAGACAATA
CAGGGAGGACACTTGCTGG--------GTGATGAGACAATGTCGACAATATATGCAACGATTTTTGTACTTTTTTCGACT
TTCGGATGTACTTACTATGGATGTACATGCGAGAACATCAGTAAGGGTTTCATATATTTGTTCATATGAATATTCTCTCT
TTCAAAGAAATATAAATATATATAGTCCGC
>chr3A_824
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------------------------------------ATATATGCAACCCAAACGCCCTCCCAAC---ACAACCAAAGAAC
CACACGAGCCAGCTTCACTCTTCGCCGTCGAAAC-TAGATTCCCCGGTAACACTGAAAACCCAAGTCAGCAATCGATCAG
CCATCTGGGAAACACGCCGTAGTGCCGTGTTTTCGTAGCGTGGAGAGTTCTTCTTCCATGGAACCACGTCAGCCCGAGCG
CGAGGAGTCCAGCACTGCCACCGT---GGACGAGGTGCTAAAACCAATGGAGGCGCCATCGGACGGTGAAGGATGCCCCA
TATGCTTGGATCAAGAGGGGGCAACGACCGCGTGGAAGGAGACGGTGTGTGGACACATCTTTCATGAACGATGCGTGGAA
AGGTGGCTCCAGGCGAAGGGAAGTTGCCCCATGTGTCGGCTACAACTTCAACAACCACGTGCTCCTGCAAAACCAGATGT
TCGATATCGTAGCCCCCTCATCTTTATGGCGATGGAATGGGAAGACAATTCTCCTCTTTCAAATCGTACTAACTATTTTA
GACAATATAGGGAGGAGACTTTTGTTGGGTGATGAGACAATGTCGAGGACATATTTAATGAATTTTGTTATTTTTTC-AG
ACTGTCGGT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TGTACTTACTGTAGATGTACATACGAGAACATCAGTAAGAG-TTTCAT
ATATTTGTTCATATGAATATTCTCTCTATCAAAGAAATATAAACATATATAGTGCGTGTATCCATTTG------------
---------------TTATAGCCGGGTAAGCGTCTTTTAAA---AAAAAATGAACAGGAGATTGTA--AAGAACTCTGCA
ATTATATTTGTCAAAACAAACAGTTGCAATTCAAACTACGGCATGTGATTTCGCATGCACGGGAATGATTTGTCTTTTT-
CAGTTTTCTCTCAAAACAAGCTTTCATCATCACTTTCTTTTTTT---TATCAAAGGGGTTTCCCG--CCCTAACTTTTCA
TTGAAAA-------------------------------------------------------------------------
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>chr3A_827
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---------------------------------------TATGCAACCCAAACGCCCTCCTCATCAAACAACCAAATAAC
CACAGGAGCCAGCTTCACTTTTCACCGTCG-AAC-TAGATTCTCCTGTAACACTGAAAACCCAAGGCAGCGATCGATCAG
CCGTCTGGG-AACACGCCGTAGTGCCGTGTTTTCGTAGCATGGAGAGTACTTCTTCCAAGGAACCACGTCAGCCCGAGCT
CGAGGAGTCCAGCAGTGCCACCTT---GGACGGGATGCTAAAACCGGTGGAGGCGCCGTCGGACGGTGAAGGATTCGCCA
TATGTTTGGGTCAAGACGGAGCAACGACTGTATGGAAGGAGACGGTGTGTGGGCACATCTTCCATGGACGATGTGTGCAG
AGGTGGCTCCAGGCGAAGGGAAGTTGCCCCATATGTCGGCGACAGCTTCAACAACCACGTGCTCCTGCAAAACAAGATGT
TCGATATCGTAGCCCCTTCATCTTTATGGCGATGGAAATGGAAGACAACTCTCCTCTTTCAAATAGTACTAACTATTTTA
GACAATACAGGGAGGAGACATTTGTTGGGTGATGAGATTTTGCCCCGCCTCCCCCTCCATTTTT----------------
--------------------------------------------------------------------------------
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-----------CATTGACCAGAGTGCGATTTGTGTACTTACTATGGATGTACATGCGAGAACATCAGTAAGAG-TTTTAT
ATATTTGTTCATATGAATATTCTCTCTATCAAAGAAATATAAACATATATAATTTGCGTATTCATTCATTAAAGCCGAGC
AAGTGTCTTTTTTCTTTA---------------------------AAAAATGCACAGGACATTGTACGAGGAACTCTGTA
ATTATATTTGTCAAAACAAACGGTTGCAATTCAAACTATGACACATGATGTCGCGTGCACTGGAATGGTTTGTCTTTTC-
TAGTTTTCTCTCAAAACAGGCTTTCGCCCC------TTTTTTTG---AATCAAAGGGCTTTTCCTCGCCCCAATTTTTTA
CTGAAAAACCTAAGGCCACGACATCCAACCCACAAAAACAGTTAAACAGCTCTCGACCACAAGCGGATAGTAGTTGCAGC
AGAATTATTACAGATAAGCACTTCTAATAGCGTTCCAACCCGATCGATACAAGTGAACAACATCAATGCCAAGCTATCCT
AAGGAGCTCCCCATGTCAGACGATCAAGGCAGAAAACATTCCAGGAACCACATAGCTTGAGTACCGACGCACAACACCTT
TCAGGAACAAACCAGAGAAACTACTAAAGCCAGAATGCACTTCAAGCTTCACCACTTTCGC-CCTTGGAAGACAATGACA
TTTCGCAAAAGTCATAAAGCCCCACAAGGTATCAGTAGAGAATATATTAATTACTTCATCTTTTTTATGTTGCTTCCAAA
AGGTAGCAAGGTCAGAAAATGAAGAAGGTACAAGAAAATCAACTATCTCAGCAATTGCGCCCTAGATATAAATAAAGCAC
AAATCAAAATACATGGCCGAGCAATACAAGGCAGATTTGCAGCCCTCTTACAAAGCAAATCTTGGCATAACCGGACACCA
CAACCACACGCGACTATGATGTCAAGTACTAACACAAGAAGGTCTCAATACAATGCTACGACACACACTAGGATACCTAA
ACTCCACGACAATGCCATCTGAAGGGGAAACGGCGCAAAGCGTCACTGATGTCGAGTACGAGACAGATGAGGGTCTTCGC
CTGGAACCCTCGTCCGAACCACACAATGATGTCCTCAAGAGGAGAGTGACACCCATGGGCACCGCCGCCGTACACGCCAA
AGTGTGGAGTTTTCATTTAGCGGCTCACACGTGCCACCACGAGGCACCTAGGACACCCAAGTTGAGCATAGACCTCATAT
CATAAT---------CATTAGTATTAGCAACCGTCATTAGTAGTTGCATGTGTCCATTAACTAAACATGCATCTTTCCCC
ACAGACGCATCGTGTTTACGTACGATCGCCTCCTCTCCCCTTTTCCCCACA------------GACGGCCCTTGATGACG
TCATTTCATCTTGTATCTATAAGCGCCTTCCTAAGC-CAGGCATGGAGATTGCACTTTATGACA-GGGTTGTCTTATCGG
GCCTGGGTGCAGGATATCCATGGC--------------------------------------------------------
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-------GCTCCTGAAACAGTAACTCCACACG-------ATTTCACCATCCTCCACTTAATTTTTCTACCGCGCGCAGGT
TTTCACCTCCACACCGGGATGGATAGTCGGTTACGGCCATGGGGTCCACCCCGCCAGCCTGGCACCTGGCAGCCGGCTAC
TTCGCTTAACGACAAGAACACCGGGACGGGACGA-------CACGGGAGACGCCGCCGGAAAAGTTTTCGACACAACAAC
CACCGCGCGCGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGCTTCTGCGCTGCCGTGGAAGCCTCTCTTCT
GGGAGCGCGTCGAGAATTCTCGTGCCCTCGCCGCCGCCGCCCGCGGCGACCTCGCCGCCGCCGCCGCCGCCGCCGCCACC
ATCCACCTCGCACTCGCATCGCCTCTGCGCGCCGGTGACCTCGATCGCGCCGTCTCGCTGATTGGAGAGTCAGAGGACAA
GCTTGCCGCGGCGGGCAAGCAGGTTGCCTTCCTGTTTTCCGGCCTTGGCACCGTCGAGCTCCTCGCGCGCCGACGGATCC
GCGGCGACGACTCTGTGGAGCAGCAGGCCCGACCGAGGGCGCGCGAGGCCAGGGCACGGGCCGGCGCCGCCTACGACGAC
GTGGCTCTCTCTCGCGGCCACCTGGGAGCCGCGGCACGTCTGGTTGCCTGCGGCGACCTCCCCGACATCTACTTCCGCGC
CGAGTTTCTCGCCGCCAC-AGAGCCGCGGCGGCGGCCTCGGAGCACCTCCACGGGGTGGACGACACCCTGCGCATCCGCC
GCGACCTCGCGCCTCCACTTCTTCCCCTGCACCGGAGCGTCCACCCCCACACGCGCTC---------GGCGGCGCACCCC
AGCGCCAAGCGGGAGGAAGAACACGACAAGGCGTGGAAGGCCCTGGCATGCTCCGCTCCAGCGTCCAGCCGCGCTGCTAC
ACGGATGCGCCGACCTCGGTAAGTGCGTCAACGCCGTGATGTCC------------------------------------
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-------------------------------------------------------------------------TCTGCCG
TTTGGGAACTC-CCGTAGCGCCGTGTTTTTGTAGCGTGGAGATTGCTTCTGCCATGGAACCACGTCACCCCGAGCTCGAG
GAGTCCAGCACTGCCACCGTGGACGAGGTGCTAAAGCCGGTGGAGGCGCCATCGGACGGTGAAGAATGCCCCATATGCTT
GGATCAAGAGAGGGTAACGACCGCGTGGAAGGAGACAGTGTGTGGGCACATCTTTCATGAGCAATGCGTGGAGAGGTGGC
TCGAGACGAAGGGGAGTTGTCCCATGTGTCGGCGTCAGCTTCAAGAACCATGTGATGCTGCAAAATATGGTATTCG---T
CGTAGTCCCCTCATCATGATGGCGGTGGAAGTAATGGACAACTCCGACCTTCCAGATCGAAGTAACTACTTTAGGCAATA
TAGGCAGGAGACGTTTGTAGGGTGACAGTGATGAGACAATGTCGACA---TATGCAACGATTTGTGTACTTTATTGTAG-
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>SNPs
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-----------------------------------------------S-------------------------S------
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--------------S-------S---------------------------------------------------------
----S--------S------------------------------------------------------------------
--------------------------S----------------S-----S-----------------S------------
------------S-------------------------------------------------------------------
---------------------S---S------------------------------------------------------
----------------------------S-----------------SS------SS--S---------SS------SS--
---S----S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------S-S-----S---------------
-----------------------------------------------------S---S----------------------
--------------------------S-------S---SSSSSS------------S-----------------------
----------------------------S-------------S-------------------------------------
-----------------S------------S------S----S-SSS---------------------------------
---------SS--------S--------------------S---------------------------------------
---------------------------S------------S----S-------------S--------S-----------
-----------------------------------------S--S-------S---------------------------
-S-----------------S------------S------------------S-------S----S---------------
---------------------------------------S----------------------------------------
--------------------------------S-------------------------S-------------S---S---
---S------------S--S----------------------------------S-------SS----------------
S------S--S----------------------S----------------------S-----------------------
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>forward_3695
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---------------------------------------------------------------------------GATCA
GCCGTCTGGGAACTT-----------------------------------------------------------------
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>reverse_4731
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----------CAAGGCCACAACATCCAACC--------------------------------------------------
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------------------------------
