>input_sequence_82160
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------------ATGGCTTCGAGAAACACTGCTGCATTCCTTGTCGGGCTGCTCCTCTCGTGCGTC--------------
------------------------CCCATGAGCAGCGC----GGCAAGAATTCTGGAGG---AGGAGAC---AGCTCCGT
CCAAAGGCGAAGAGCACCTGCCGGAGCTACCAATGCTTCCCAAGGTTG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AGCTGCCACCATTCCCGGA
GGTACATCTGCCACCGAAGCCCGAGCTGCCCAAGGTAGAGCTGCGGTCGTTCCCTGAGGTGCACCTGCCATCAAAGCCCG
AGCTGCCAACGTTCCCGGAGGTGCACCTTCCAGCCAAGCCGGAGCTGCCTAAGGTGGAGCTGCCGCCAAAGCCAGAGATG
CCCACCATCCCGGAGTTCCACTTCCCGGAGCCGGAGGCTAAGCCA-----------------------------------
--------------------------------------------------------------------------------
-----------TGA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr2A_1_TraesCS2A01G177900
TATGGCCGCCTGGTCTCTCCTTTTGTAATTTTTTTACTTGACCTGGTCCTTATTTTAACTCCATGTCGTATCCTAGCATC
GAGCGAATGGAGGTGGCAGTGATCTGGGTGTCAAGTGTCAACACAAATGCCGCTGATGAGGAGTGCAGGACCACTTTTTT
GTTACCTTACTCCAGATTTTTGGTGTTCCATTCGGCGGGTAAATATGTCCCAATCTGTTCTTGTGTAGGATGAAATCTAT
ATAGGTTGGCCAAATTCAAAAGCCAAACAATAAGACAACAACAATCAAACCAACGTGACCGAGTGCTCAACACTTAAGTA
CCACACCGGCA----------------------------GAGCAAGCAAATTAAGCAGGGTTTGTTGGTAAAGTAACTAT
CTTAATAATAGTAC----------------------ACTTCAGGACCTTGGCAAGTAGACAAGTTTGGAGACCCAAAAGG
GCAATTGAACCAGACACTGAACTCAAAATTTTATCTAATTTTCATTGTCTCTACTAATTGTATC-GATCTGGGAAAAATC
TGACAAACGGACG-----TGCGCGTGTTATTCTTATAGCGTAACCTCTGGGGTGCCGCCAGTCGTCTAGCTCAGATGCTG
GAGAAGGAAGAAAAGGGAGGAGTCTAGTTGGCGGCAGCTAGCAATGGCAATTGCTGATGTACAAACTTGCTTGTGTTCTT
CTGCCACCTAAT---GGTCCCCTGGATAAGGCGTTTAGTCTTAGCAGCTGGCCTAACAATTGCGTGTCT-----------
--ATCCTCAACATCAGCCGCAAAAGCCGAAAGAACTCTCTAATCTCTCTTCACCCAATTCGT-----AAGCAGGTGGCCA
GACTGAGACTC-GAAATTAAAGAGCACACATAAAACCGGGAACT----GCAGGTGAGTAGGTGAACAGACTCGTTGCAAA
GCATTGGACC----CAAGACACTCAAGCGTTT-CTTAACTCTATAAATGGAAT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GCAGCACCTGCTATCTCTCCCACA
ACAAAACCACACCACATAGCTAGCT---------AGT------------ACAACCATA----------------------
-------------------------------------------------------------------------------G
TCGTCCATCAAAATGGCTTCGAGAAACACTGCTGCATTCCTTGTCGGGCTGCTCCTCTCGTGCGTC--------------
------------------------CCCATGAGCAGCGC----GGCAAGAATTCTGGAGG---AGGAGAC---AGCTCCGT
CCAAAGGCGAAGAGCACCTGCCGGAGCTACCAATGCTTCCCAAGGTTG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AGCTGCCACCATTCCCGGA
GGTACATCTGCCACCGAAGCCCGAGCTGCCCAAGGTAGAGCTGCGGTCGTTCCCTGAGGTGCACCTGCCATCAAAGCCCG
AGCTGCCAACGTTCCCGGAGGTGCACCTTCCAGCCAAGCCGGAGCTGCCTAAGGTGGAGCTGCCGCCAAAGCCAGAGATG
CCCACCATCCCGGAGTTCCACTTCCCGGAGCCGGAGGCTAAGCCA-----------------------------------
--------------------------------------------------------------------------------
-----------TGAAGACTGTCTTCACTTATCTTCTTTTTGCTCGTGCTCCTACATGTATCCTTTGCTCGTGTTGTGTCT
TTCATGGGATT---GTTTAGTGTGTATTTTCCGTGAGTCATTT-GTGTGATATCAAACGCTTAT----CTATGGCGCCTA
TTTAGATGGAATGTACATGA-----------ACAATACAGATGGATGTTTACATTAACAAGG--TGGCAGCTGAGTTCCA
CAATTAA--------------TTGAGCAACCATCT---TCT---TAACTAATGGAAAAGGCAAAGCTTTG----------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CCTTATT
TCAAGTACATTGATGTATACATATAA------TAGTGTCGATTGCACACTTTTCCTTTTAACTTAAAAATATTTGAAAAG
-------CACGCTCATGCATGATTCATCCTTATCAATAATTCCAATCGGAACTTTTTGCCCGATAAACCAACGCACGGAA
TCCTAACTCTGGCACGCAATATTTACGGCACATGCATTGTCCTTTGAGTTTGGCGTTGTTAGGCCTAGATACCTTGCGAA
TTAAGTAGGGTTTGGTTACCGTACGGAAATCCATGCACCATTCTGAAATTCCTAGGAGTGATATGAACAATCT-C-ATGG
GCATGAAGGTATCGGCAGGAGATGGGTGGT--AGCAAATTCTTGAAATCCTGCCAGTTAGAGGGCTCAGACTTTGTTCAT
ATTCGATGAATTCTCCTTTAAATAAC-TTAAAAAAAGAAACGTGAGACAACCTTGTGGAATTGCAACGACGTCTCCACCT
AGGTTTGATCAATATGTAGAGCAGATCACATACCATTGGTGTATTTTGCGTAATCAATAAACCCAAATATCTTGTTATCT
TCTTAATAATAGCTCAATGGTGTTAATACTCCCGGTCATAATTTTTATGTGAATAGATTGAAAATAGCTTGAAAGATGAA
TAGGCAACTACTAATCGAGTTTGGCGGTGGAGTTTGCTTGCTA------------TTGGTGAGCGCTGATGCCTCCCGCA
TGGGTGCTTCTGCTAGGTTGCATCTTAGGTCTAGTTGCTACTTGATAC
>chr2B_2
-ATGGCAGCTTGGTCTCTCCTTTTGTAATTTTCTTCTTTGACCTGGTCTTTCTTTTAACTCCATGTCGTATTCTAGCATC
GAGCAAATGGAGGTGGCAGTGATCTGGGTGTCAAGTGTCATTACAAACGCCGCTGATGAGGAGTGCAGGACCACTTTCTT
GTTACCTTACTCCGGATTTTTGGTGT----------------------CCCGATTTGTTCTTGTGTAGGATGAAATC--T
ATAGGTTGGCCAAATTCAAAAGCCAAATAATAAGACAACAACAATCAAACCAACGTTACAGAGTGCTCAACTCTTAAGTG
CCACACCGGCAAAGCGAACGCATCGCTAGTTAAGCGACTGAGCGAGCAAATTAAGCAGGGTTGGTAGCTAAAGTAACTAT
CTTAATAATAGTTTAGAGACAAATAGGCAACTACAAACTTCAGGGCCTTGGCAAGTAGACAAGTTTAGAGACCCAAAAGG
GCATTTGAACCAGACACCGAACTCAAATTTTTATTTAATTTTCGTTGTCTCTACTAATTGTATCCG--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------ATGGCTTCAAGAAACACTGCCTTATTCCTCGTCGGGCTGCTCCTCTCGTGCGTC--------------
------------------------GCCATGAGCAGCGG----GGCAAGAATCCT---GG---AGGAGAC---GGCTCCTT
CCAAAGGCGAGGAGCACCTGCCGGAGCTGCCAGCGCTGCCCAAAGTCG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AGCTGCCGCCATTCCCGGA
GGTGCATCTGCCACCTAAGCCTGAGCTGTCCAAGGTAGAGTTGCCGTCGTTCCCTGAGGTGCACCTGCCACCCAAGCCCG
AGTTGCCAACGTTCCCGGAGGTGCACCTTCCAGCCAAGCCGGAGCTGCCCAAGGTTGAACTGCCACCGAAGCCTGAGATG
CCCACCATCCCGGAGTTCCACTTCCCGAAGCCGGAGGCTAAGCCA-----------------------------------
--------------------------------------------------------------------------------
-----------TGAAGACTGTCTTCACTTATCTTCTCTTTGCTTGTGCTCCTACATGCACCCGTTGCTCGTGTTGTGTCT
TCCATGTGGTT---ATTTAATCTGGATTTTCGGCGAGTCA-TT-GTGTGATATCAAGCGCTTAT----CTTTGGCGGCTA
TTTAG-----------ATGG-----------ACAATACAGATGAATGTTTACATTAACAAGGAGTGGCAGGTGAGTTCCA
TAATTAA--------------CTGAGCAACCATCT---TCTTCTTAACTAATAGAAAAAACAAAGCTTTG----------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CCTCGTT
TCAAGTACAGTGATGTATACATATAAACATAATAGTGTTGATTGCACAATTTTCCTTTTGTCTTCAAAATATTTGAAAAG
TCTAGATCACGCTCATGCATGATTCATCCTTATCAATAATTCCAACTGGAAGTTTTTTGCCCCAC---------------
----------GGCATGCAATATTTACGGCACAT-CATTGTCCTTTGAGTTTGGCATTGATAGGCTTAAATACCTTGCG-A
TTAAGTAGGGTTTGGTTACTGTTTTGAAATTCGGGCACCGTTCTGAAATTCCTAGGAGTGATATGAACAATCT-CTATAG
GTATGAAGGTATCGGTGGGAGATGGGTGTGACAGCAAATTCTTCAAGCCCGGCTGGTTCGA-GGCTCAGACATTGTTCAT
ATTCGACAAATTTTCCTTTATATAACTTTTAAAAAAGATATGGGAGACTACCTTGTGGAGTTGCAATGACGTCTCCACCT
AGGTTTGATCGATAAATCTG---------------------------------------------AATATCTTGTTGTCT
TCTTAATAATAGCTCAACGGTGTTAATACTCTTGGCCATAATTTTCATGTAAATAGATTGAAAATAGCTTGAAAGATGAA
TTGACAACTACTGATCGAGTTTGGCGGTGGAGTTTGCTTGTTGTTGATTGTGGTTTTGGTGAGCTCCGATGCCTCCCGCA
TGCATGCTTCTGCTGGGTCGCATCTTAGGTCTAGTTGCTACTTGATAC
>chr2D_250
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CCAAATTCAAAAGCCAAGTAATAAGACAACAACAATCAAACCAACGTTACCGAGTGCTCAACTCTTAAGTT
CCACACCG-CAGAGCGAACACATAGCTAGTTAAGCG-------------ATTAAGCAGGGTTTGTAGCTAAAGTAACTAT
CTTAATAATACTTTAGAGACAAATAGACAACTACCAACTTCAGGACCTTGGTAAGTAGACAAGTTTAGAGACCCAAAAGG
GCATTTGAACCAGACATTGAACTCAAATTTTTATTTAATTTTCATTGTCTCTACTAATTGTATCCGATTTGGAAAAAATT
TGACAAACGGACG-----CGCGCGTGTTATTCTTATAGCATAACCTCTCGGGTGCCGCCAGTCGTCAAGCTCGGATGT--
--------------GGGAGGAGTCGAGTTGGCAGCAGCTAGCAATGGCAATTGCTGATGTACAAACTTGCCTGTGTTCTT
CTACGATCTGAT---GGTCCCTTGGACAAGGCGTTCAGTCTTAGCAGCTGGCCTAACAATTGCGTGTTT-----------
--ATCCTCAACATCAGCCGCAAAAGCCGAAGGAACTCTCTAATCTCTCTTCACCCAATTCGT-----AAGCAGGTAGCCA
GTCCGAGACTA-AAAATTAAAGAGCACACATAAAACCATGAGCT----GCAGGCGAGTAGGTGAACGGCCTCGTTTCAAA
GCACTAGATC----CAAGACACTCGATCGTTTTTTTAACTTTATAAATAGAACGCAGCACCTGGGGAAATACCCTTTGGC
TCTCGCATGTATATACACACTATATGGGGTATTTTAATAAATAATTAAATAAAATGTCAAAATAGTTCAAAACTATAGGT
TAAACTTGACTTACTTGCGCACTAGTATATAAATTTTCACAAAATAAAAACCAATGTTGACTTCACAGCAAAAAAGACAG
AATTTATTTGCTATTGTAGGTCACTATTCATGCTATTTTGATCAAAAATTTGTCTTTTTTGAAAAAAAGTCAAAGAGGAA
TTTTTCTTTTGTGAAACTTTTTTCACTAGTATAATGGAAGGTCAAGTTTATTTCAAAAATATTTTTAGAATAATTTGACT
ATTTATTGAATTGCTAATTTTTTTCCATATATGGTAGGAACCAAACGTTCCCCTCCGCAGCACCTGCTATCTCTCCCACA
TCAAAACTACACCACAAG---AGCTAGC---------------------ACAACCATTTTCACGAAAAGACGGCCCTAGA
GCCGCATTTCATTGATTAATCAGGAGAGGAACAAATACAAAGACTTTAGAGTTAGAGACTAGGTGAAAAGCCTGAAGCTG
GCATCCAGAAAAATACAGCGAGCAGCATTCAAGGAGGCTCAGAAAATCTGTCAACCAGGGTAAGCCCGGCAGCCGACTAG
CATCGCGCTTCATCCATGATACGTCCCATGAGTTGTGGAAC---------------------------------------
----------GGAGCACCTGTCGCCACTGAAAACACGGTTGTTGCGTTCTTTCCATATCATCCAGGAGATCAAGCAGATG
GCTGCCTTCCAAACTTTTTTCTCATCCACCGGGAGCGACTGGAGCTGTGTCATCCAGTTGGTCTTCAGAGATAAGCATTG
AACGCTCGAGCTCACCGCTGTCGTCAGGTTTAGGAATGGGCCGGCTAGCTTATTGATAGCCACCGTCCACAACTGTTTGG
TGAAGCTGCAGTCCACGAGCAGATGGTTAGCAGTCTCCGGTGCAGCGCAGCAGAGTGAGCAGACCGGGTTATATGGTATG
CCCCGGATAGCCAGATTGTCAGCCGTTAGACATCGTCCGTGAGCAGCAAGCCAGAGGAACGTCTTGGCTCGAGGTGCCGC
TTTGGCGGACCAGATGAGCGCCTTGTCGTCGGATTGCAGAGCACCTTCAAACTGGCATAGGTACGCCGACTTGGCAGAGT
AGTTTCCATCAGCCGTCCAACGCCAAGTCACGGTGTCTACCACCGAGTCGCTGAAGCTTATAGCCGCCGCCATCTCCGAT
AAGCAGCAAAGTTGTCTGAGCACCAGTGCAGAGGGGTTGGGCTTGACCAGGCGCATCCAAAGATTGTCTGTGATAGCCTC
ACGCAGCGAT--------------------------AGGCGGCGCTTGGTACAGTGTTGCAACAGCTCGGGCCATCGGTC
AATTGGGCGCAGACCCTCTGCCCAGTGCAAATCCCAGAAAGGGGTGGACCTGTCTTTTCCAAGAAGATGGTTGCTCAATT
AATAGATAAGCGCTTGATATCACACAAATGACTCATGGAAAATCCACACTAAACAATCCCATGATAGGAGCACGAGCAAA
GAGAAGACAAGTGAAGACGGTCTTCATGGCTTAGCCTCCGGTTCCGTGAAGTGGAACTCCGGGATGGTGGGCATCTCTGG
CTTCGGTGGCAGCA-----------------------------------------------------------GCTCCGG
CTTGG-----------CTGGAAGGTGCACCTCCGGAAATGTTGGCAGCTCGGGCTTGG-----GTGGCAGGTGCACCTCA
GGGAACGCGAGCAGCTCTACCTTGAGCAACTCGGGCTTAGGTGGCGGGTGCACCTCCGGGAATGGCGGCAGCCCGACCTT
GGGCAGCGTTGGCAGCTCGGGCAGGTGCTCCTCGCCTTTGGAAGGAGTTGTCTCCTCCTCCAGAATTCTTGCCGCGCCGC
TCATGGCGACGCACGAGAGCAGCAGTCTGACGAGGAATACAGCGGTGTTTCTTAAAGCCATTTTGATGGACGACCTCGTT
TCAAATCCATTGATGTATACAT------ATAATAGTGTTGATTGCACACTTTTCCTTTTAACTTAAAA-TATTTGAAAAG
-------CACGCTCATGCATGATTCATCCTTATCAATAATTTCAATTGGAAGTTTTTGCCCGATAAAC-----CACGAAA
TCCAAACTCTGGCACGCAATATTTAGGACACATGCATTGTCCTTTGAGTTTGGCATTGTTAGGCCCAAATACTTTGTGAA
TAAAGTATGGTTTGGTTACCGTTCAGAAATTCGGGCACCGTTCTGAAATTCCTAGCAGTGATATGAACAACCTTC-ACGG
GCATGAAGGTATTAATGGGAGATAGGTGGT--AGAAAATTCTTGGAAACCTGCCGGTTCAAGGGCTCAGACATTGCTCAT
ATTTGATGAATTCTCC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr2D_387
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------ACTTCAGGACCTTGGCAAGTAGACAAGTTTAGAGACCCAAAAAG
GCATTTGAACCAGACATTGCACTCAAATTTTTATTTACTTTTCATTGTCT--ACTAATTGTATCCGATCTGCGAAAAATC
TGACAAACAGACGTGCGCTGCGCGTGTTATTCGTATAGCATAACCTCT-----------------------------T--
--------------GGGAGGAGTCTAGTTGGCGGCAGCTAGCAATGGCAATTGCTGATGTACAAACTTGCTTGTGCTCTT
CTGCAACCTGAT---GGTCCCTTGGACAAGGCGTTTAGTCTTAGCAGCTAGCCTAACAATTGCGTGTTT-----------
--ATCCTCAACATCAGCCGCAAAAGCCGAAGGAACTCTCTAATCTCTCTTCACCCAATTCGT-----AAGCAGGTGGCCA
GACTGGGACTC-GAAATTAAAGAGCACACATAAAACCTGGAACT----GCACGCGAGTAGGTGAACAGCCTCGTTGGAAA
GCATTGGATC----CAAAACACTTGAGCGTTT-TTTAACTCTATAAATAGAAC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------ACATCACCTGCTATCTCTCCCACA
TCAAAACCACATCAGAAG---AGCTAGCTAGTACAGT------------ACAATCATA----------------------
-------------------------------------------------------------------------------G
GCATCCATCAAAATGGCTTCAAGAATCACTGCTGTATTCCTAGTCGGGCTGCTCCTCTCGTGCGTC--------------
------------------------GCCATGAGCAGCGG----GGCAAGAATCCT---GGGGAAGGAGAC---AACTCCAT
CCAAAGGCGAGGAGCACCTCCCGGAGCTGCCAATGCTGCCCAAGGTCG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AGCTGCCGCCATTCCCGGA
GGGGCATCTGCCACCTAAGCCCGAGCTGCCCAAGGTAGAGCTGCCGTCGTTCCCTGAGGTGCACCTGCCACCCAAGCCCC
AGCTGCCAACATTCCCGGAGGTGCACCTTCCAGCCAAGCCGGAGCCGCCAAAGGTGGAGCTTCCACTGAAGCCAGAGATG
CCCACCATCCCGGAGTTCCACTTCCCGGAGCCGGAGGCTAAGCCA-----------------------------------
--------------------------------------------------------------------------------
-----------TGAAGACCGTCTTCACTTCTCTTCTCTTTGCTCGCGCTCCTACATGTATCCGTTGGTCGTGTTGTGTCT
TT-GTGTGATT---GTTTAGTCTGGATTTTC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr2D_583
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TG
GAGTGGGAAGAAAGGGGAGGAGGAGTCCTACTGGTGGC-AGCAACAGTCAATGCTGATGTCCAAACTTGCTCGTGTTCAT
GTGTGATCTGATAAAGGTCCCTTGCACAAGTTGTTTCGTCTTAGCAGCTGGCCTCACAATCGTGTGTTTTCTCCAGGTCA
TCATCCTCAAGAGCAGCCGTAAAAGCCGAAAGAACACCTAA---------------------ATCGTAAGCAGGCAGCCA
GACTTAGACTCTGAAACTAAAGAACACACGTAAATCTGG-AACTGC----ACGCGAGTAGGTGACCAGCCTTGTTATAAA
GCATTTGATTCTTGCAAGATGCAAGTG---TT-TTGAACTCTATAATTAGAAT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTGAGACGTCCTATCTCCCCCACA
TCAATACCACACCACAAG---AGCTAGCT-----AGC------------ACACCCATA----------------------
-------------------------------------------------------------------------------G
TCGTCCATCAAAATGGCTTCAAGAAACACCGCTGTATTCCTCGTCGGGCTGCTCCTCTCGTGCGTC--------------
------------------------GCCATGAGGAGCGG----GGCAAGAATCCT---GG---AGGAGGAGACGCCTTCGT
CCAAAGGGGAGGAGCAGCTGCCGGAGCTGCCAACGCTGCCCAAGGTTG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AGCTATCGCCTTTCCCGGA
GGTGCACCTGCCACCTAAGCCCGAGCTGCCCAAGGTAGAGCTGCCGTCGTTCCCTGAGGTGCACCTGCCACCCAAGCCCG
AGCTACCAACGTTCCCGGAGGTGCACCTTCCAGGCAAGCCGGAGTTGCCTAAGGTGGAGCTGCCACCGAAGCCAGAGATG
CCCACCATCCCGGAGTTCCACTTCCCGCAACCGGAGGCTAAGCCA-----------------------------------
--------------------------------------------------------------------------------
-----------TGAAGACTGTCTTCACTTGTCTTCTCTTTGCTCGTGCTCCTACATGTATCCTTTGCTCATGTTGTGTCT
TTCATGGGATT---GTTTAGTGTGGATTTTTCATGAGTCATTT-ATGTGATATCAAGCACTTAT----CTATGGCGCCTA
TTTAG-----------ATGGAATGTACATCTACAATACGGATGGATGTTTACATTAACAAGG--TGGCAGCTGAGTTCCA
CAATTAA--------------TTGAGCAATCATCTTCTTCT---TAACTAATGGAAAAGGCAAAGCTTTG----------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CCTCATT
TCAAATACATTGATGTATACAT------ATATTAGTGTTGATTGCACACATTTCCTTTTAACTTAAAAATATTTGGAAAG
-------CACGCTCATGCATGGTTCATCCTTATCAATAATTCCAATTGGAAGTTTTTACCCAATAAATCACCGCACGGAA
TCCTAACTCTGGCACGC--TATTTACGACACATGCATTGTCCTTTGAGTTTGGCTTTGTTAGGCCTAAATACCTTGCGAA
TTAAGTAGGGTTTGGTTACCGTTCAGAAAGTCGGGCACCGTTCTGCAATTCCTAGGAGTGATATGAACAATCTCC-ATGG
GCATGAAGGTATGGGT--GAGATGGGTGGT--AGCAAATTCTTGGAATCCTGATGGTTCGAGGGCTCAAGCATTGTTCAT
ATTCGATGAATTCTCCTTTAAATTACTT--AAAAAAGAAATGGGAGACAACCTTGTGGAATTGCAACGACGT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr2B_771
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TCTCCCTTCACCCAAATCAGATCGTAAGCAGGCAGCCA
GACTTAGACTATGAAACTAAAGAGCACACATAAACCGAG-AACTGCGCGCAGGCGAGTAGGTGACCTGCCTACTTGCAAA
GCATTGGACC--CGCATGACATGCAAGCGTTT-TCGAACTCTATAAATAGAAC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTAGCAGCTGTTATCTCTTCCACA
TCAAAACCACATCACACA---AGCT---------AGT------------ACAACCATA----------------------
-------------------------------------------------------------------------------G
GCATCCATCAAAATGGCTTCAAGAAACACTGCTTTATTCCTCGTCGGGCTGCTCCTCTCGTGCGTC--------------
------------------------GCCATGAGCAGCGG----GGCAAGAATCCT---GG---AGGAGAC---GGCTCCTT
CCAAAGGCGAGGAGCACCTGCCGGAGCTGCCAGCGCTGCCCAAAGTCG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AGCTGCCGCCATTCCCGGA
GGTGCATCTGCCACCTAAACCTGAGCTGCCCAAGGTAGAGCTGCCGTCGTTCCCTGAGGTGCACCTGCCACCCAAGCCCG
AGCTGCCAACATTCCCGGAGGTGCACCTTCCAGCCAAGCCGGAGCTGCCCAAGGTTGAACTGCCACCGAAGCCTGAGATG
CCCGCCATCCCGGAGTTCCACTTCCCGAAGCCGGAGGCTAAGCCA-----------------------------------
--------------------------------------------------------------------------------
-----------TGAAGACTGTCTTCACTTATCTTCTCTTTGCTTGTGCTCCTACATGCACCCGTTGCTCGTGTTGTGTCT
TCCATGTGGTT---ATTTAGTCTGGATTTTCGGCGAGTCA-TTTGTGTGATGTGAAGCACTTAATTACCTATGGCGCCTA
TTTAG-----------ATGGAATGTACATGTACAAAACAGATGGATGTTTACAT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr2D_785
ATT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GTAAGCAGGCAGCCA
GACTTAGACTATCAAACTAAAGAGCACACATAAACTGAG-AACTGC----AGGCGAGTAGGTGACCAACCATTTTGCAAA
GTAGGGA---CTCGCATGACAAGCAAGCGTTT-TTGAACTCTATAAATAGAAA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTAGCAGCTGTTGTCCCTCCCACA
TCAAAACCACATCACACG---AGCT---------AGT------------ACAATCACA----------------------
-------------------------------------------------------------------------------G
GCATCCATCAAAATGGCTTCAAGAAACACGGCTTTATTCCTCGTCGGGCTGCTCCTCTCGTGCATT--------------
------------------------GCCATGAGCAACGG----AGCAAGAATCCT---GG---AGGAGAAGACGACTCCTT
CCAAAGGCGAGGAGCACCTGCCGGAGCTGCCAGCGCTGCCCAAGGTCG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AGCTGCCGCCGTTCCCGGA
GGTGCATCTGCCACCTAAGCCTGAACTGCCCAAGGTAGAGCTGCCGTCTTTCCCTGAGGTGCACCTGCCACCCAAGCCCG
AGCTCCCAACGTTCCCAGAGGTGCACCTTCCAGCCAAGCCGGAGCTGCCTAAGGTGGAGCTGCCACCAAAGCCAGAGATG
CCCACCATCCCGGGGTTCCACTTCCCGAAGCCGGAGGCTAAGCCA-----------------------------------
--------------------------------------------------------------------------------
-----------TGAAGAATGTCTTCAGTTGTCTTCTCTTTGCTTGTGGTCCTACATGTTCCAGTTACTCATGTTGTGTCT
TCCGTGTGGTT---GTTTAG-----ATTTTTGGCGAGTCATTT-GTGTG--------------C----GTATTGCATCTA
TTTAG-----------ATGGAACGCACATGTACAAAACAGATGGATGTTTACAT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chrUn_791
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AAGCAGGCAGCCA
GACTTAGACTATGAAACTAAAGAGCACACATAAACCGAA-AACT----GCAGGCGCGTAGGTCACCAACCTACTTCCAAA
GCATTGGACTCTCGCAAGACATGCAAGCGTTT-TTGAACCCTATAAATAGAAC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTAGCAGCTGTTATCTCTCCCACA
TCA-----------CACG---AGCT---------AGT------------ACAATCATA----------------------
-------------------------------------------------------------------------------G
GCATCCATCAAAATGGCTTCAAGAAACACAGCTTTATTCCTCGTCGGGTTGCTCCTCTCGTGCGTC--------------
------------------------GCCATGAGCAATGG----AGCAAGAATCCT---GG---AGGAGGAGACGACTCCTT
CCAAAGGCGAGGAGCACCTGCCGGAGCTGCCAGCGCTGCCCAAGGTCG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AGCTGCCACTATTCCCGGA
GGTGCATCTGCCACCTAAGCCTGAGCTGCCCAAGGTAGAGCTGCCCTCTTTCCCTGAGGTGCACTTGCCACCCAAGCCCG
AGCTGCCAACGTTCCCCGAGGTGCACCTTCCAGCCAAGCCGGAGCTGCCTAAGGTGGAGCTGCCACCGAAGCCAGAGATG
CCCACCATCCCGGAATTTCACTTCCTGGAGCCGGAGGCTAAGCCA-----------------------------------
--------------------------------------------------------------------------------
-----------TGAAAACTGTCTTCAATTGTCTTCTCTTTGCTTGTGGTTCTACATGTACCGGTTGCTCGTGTTGTGTCT
TTCGTGGTTGTTTAGTCTAG-----ATTTTTGGCGAGTTATTT-GTGTAATGTGAAGCGCTTAC----GTATTGCATCTA
TTTAG-----------ATGGAACGCACATGTACAAAACAGATGGATGTTTA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr2B_901
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GCATTG-CTGAACTCTATAAGTAAAAC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTGAGACATGCTATCTATCCCACA
TCAAAACCGCACCACGAG---AGCT---------AGCTAGAAGTGTAGAACAACCATA----------------------
-------------------------------------------------------------------------------G
GCGTCCAGCAAAATGGCTTCGAGAAACACCATTGTATTCCTCCTCGGACTGTTCCTCTCGTCCGTC--------------
------------------------GCCATGAGCAACGCGGCCGGCAAGAATGCT---AG---AGGAGGAGATGCCTCCGT
CCAAAGGCGAGGAGCACCAGCCCGAGCTGCCAACGCCGCCCAAGGTTG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AGCTGCCACCATTCCCGGA
GGTGCACCTGCCACCTAAGCCTGAGCTGCCCAACGTAGAGCTGTCGACATTTCCGGAGGTGCACCTGCCACCCAAGCCCG
AGATCCCAACGTTCCCGGAGGTGCACCTTCCAGCCAAGTCTGAACTGCCCAAGGTGGAGCTACCACCAAAGCCCAAGATG
CCTACCATCCCCGAGTTCCACTTCCCTGAGCCGGAGGCTAAGCCA-----------------------------------
--------------------------------------------------------------------------------
-----------TGAAAACTGTCTTCACTTGTCTTCTCTTTGTTTGCGCTCCTACATGTATCTGTTGGTCGTGTTGTGTCT
TT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr2D_910
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------AACTCTATAAATAGAAC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTGAGACATGCTATCTCTCCCACA
TCAAAACCGCACCACAAG---AGCT---------AACTAGAAGCCTAGAACAACCATA----------------------
-------------------------------------------------------------------------------G
GCGTCCAGCAAAATGGCTTCGAGAAACACCGTTGTATTCCTCCTCGGACTGTTCCTCTCGTCCGTC--------------
------------------------ACCATGAGCAGCGC----GGTAAGAATGCT---AG---AGGAGGAGATGGCTCCGT
CCAAAGGTGAGGAGCACCAGCCCGAGCTGCCAACGCTACCCAAGGTCG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AGCTGCCGCCATTCCCGGA
GGTGCACCTGCCACCTAAGCCTGAGCTGCCCAAGGTAGAGCTGCCGACGTTCCCGGAGGTGCACCTGCCACCCAAGCCCG
AGCTCCCAACGTTCCCGGAGGTGCACCTTCCAGCCAAGCCTGAGCTGCCCAAGGTGGAGCTACCACCAAAGCCCGAGATG
CCTACCATCCCCGAGTTCCACTTCCCTGAGCCAGAGTCTAAGCCA-----------------------------------
--------------------------------------------------------------------------------
-----------TGAAGACTGTCTTCACTTGTCTTCTCTTTGTTCGCGCTCCTACATGTATCTGTTGGTCGTGTTGTGTCT
TT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr2D_910
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------AACTCTATAAATAGAAC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTGAGACATGCTATCTCTCCCACA
TCAAAACCGCACCACGAG---AGCT---------AGCTAGAAGCCTAGAACAACCACA----------------------
-------------------------------------------------------------------------------G
GCGTCCAGCAAAATGGCTTCGAGAAACACCGTTGTATTCCTCCTCGGACTGTTCCTCTTGTCCGTC--------------
------------------------GGCATGAGCAGCGC----GGTAAGAATGCT---AG---AGGAGGAGATGGCTCCGT
CCAAAGGCGAGGAGCACCAGCCCGAGCTGCCAACGCTGCCCAAGGTCG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AGCTGCCGCCATTCCCGGA
GGTGCACCTGCCACCTAAGCCTGAGCTGCCCAAGGTAGAGCTGCCGACGTTCCCGGAGGTGCACCTGCCACCCAAGCCCG
AGCTCCCAACGTTCCCGGAGGTGCACCTTCCAGCCAAGCCTGAGCTGCCCAAGGTGGAGCTACCACCAAAGCCCGAGATG
CCTACCATCCCCGAGTTCCACTTCCCTGAGCCAGAGGCTAAGCCA-----------------------------------
--------------------------------------------------------------------------------
-----------TGAAGACTGTCTTCACTTGTCTTCTTTTTGTTGGCGCTCCTACATGTATCTGTTTGTCGTGTTTTGTCT
TT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>SNPs
S-----S--S----------------------S--SS-----------S--S-------------------S--------
----S-----------------------------------SS-----S-----------------------------S--
-------------S------------SSSSSSSSSSSSSSSSSSSSSS---S--S----------------------SS-
---------------------------S----------------------------S--------------S-------S
-------------------------------------------S---------------------S-S------------
------------SS----------------------------------------------------S-------------
---S-----------------------S------S---------------------------------------------
---------------------------------------S--------S-----------------S-----S----S--
---SS--------S------------------------------------------------------------------
----S----S-----------S----S----------------------------------------S------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------S-----------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S---------------S-SSS-----------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S------S--------------------------------------
---------------------------------------------------S--SSS-----------------------
----------S-----------------S--------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S-----------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------S-----------------------
-----SSSSSSSSSSS---S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------S-----------------------------------------
----------------------------------------------S----S------------------S---------
------------------------------------------------------S------------S------------
----------------------S-S-----S-SS-----S----------------------------------------
---------------SS-------------------------------------S---S------------S--------
-----------------------------S----------S-S-------------------------------------
----------S---SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S---
-----------------S-------------SS--S---------S----S-----------------------------
-S-S--------S---------------------------S-S---------------------S-S-------------
--SS----------S---S-----------------------------
>forward_203
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TGTTCCATTCGGCGGGTAAA-------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>reverse_1732
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------TCTGGAGGAGGAGACAGCTC---------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------
>forward_212
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CGGCGGGTAAATATGTCCCA----------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>reverse_3456
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CAGGAGATGGGTGGTAGCAA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
