>input_sequence_82114
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------------------------------------------------------------------ATGATGATGGGGTA
CTTCTGGGCGCCGAGGAAGTCGGCGGCGGTGGAGAGGGACCAGAGCCTGCGGGCGGGGCTGCTCGTCGATGGCGGCAGCG
GCGAGGCCGCGGCCGTTCCCAAGGGGTACTTCGCGGTGTACGTGGGCGCGGAGGCGCGGCGGTTCGTGGTGCCGATGGGC
TACCTCCACCAGCCGGCGTTCCGGGCGCTCATGGAGCTGGCGGCCGAGGAGTTCGGCTTCGGCCAGGCCGGCGGGCTCCG
CATCCCCTGCCGCGAGGAGGACTTCGTCGCCATCGTCGCCGCGCTCGAGGCCACGGCCGAGTCGCGCCAGCGCAGGCGGA
GCGCGGCCGGCAGGAAGAGCAGGAGCAACGCCACACCATGGTGA------------------------------------
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>chr6B_1_TraesCS6B01G143400
CAATAGCGGTTTGTGCATTGTTTTCTCATTATTT-ATGCATGAGAGGGAACGTGTGTACTACTACTAGTATGGTTAACT-
-----GAAGCTAGTTAATTAATTGAAGTGTATTGGGTACACCGTACACACGCCTTTTTTTTGCGGAAAGTACACACGCCT
TAACTCTACAGATCTGCGGTTAATTAGACTGCAATTAACCAGCTAACATTAGTCGGTGAATTTAAAAGCAGATGCATA-T
TTTCTCCCTTTCTGAAAGATGGATTCTTCTAAAAAAAACGGACTACCGCTCAAACAGAAGAACTGGTGGAAGAACAGCTA
GTACACTGGTACAGCTGTACAGCTAATTGACTCGTTCATTCCATATAACAAATAAATGAAGATAAGACGTGTAACCGTAT
CACCGTACCCTACATG----GATCCAAGTCCCTAACCAAAACCATTGGAGAAAAACACATATGAACACACGCCATTCCAT
TGACCTACTCCACACATACGCCTTCATTACACTGTCAATGACAGCCAGCTGAACATTTGTACAATAATCAAGAAAGCATA
CCCATCCAAGAGAAATCATAATAATAGCTTTTTGCGTAAAGTAGAGAAATAATAGCTGATATGTGCACAATAATAAGATA
TTCTCCATAAAAATATATTCCATGTGTGGTGTTTATAACATATTCTCCAAGAGTAGAATAAGATATGAGCCTTGCTGCAA
GGCTGCTCCAGCTATGCCAAAGGCAGGAGGCTCCAAGAACAAGAGCCGCCCTTTGTCTCCAACCCCAACGACCCCACCCC
GC----CCCATAATATACACCCGCCATCGCAAGAACCACCACACCTCACATGCTTTGATCCCTCCCCCTCCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCTTAACCTCCTCCGCCGCAGCCCGTGCTCTCCCGTACTTCTTGGAGCCGATCATCG----
----ACCAACCA--GCCACTCTCCCCCGGCCGTTTCTTTGGCACCACACCACCGCCGATCGCCGAGATGATGATGGGGTA
CTTCTGGGCGCCGAGGAAGTCGGCGGCGGTGGAGAGGGACCAGAGCCTGCGGGCGGGGCTGCTCGTCGATGGCGGCAGCG
GCGAGGCCGCGGCCGTTCCCAAGGGGTACTTCGCGGTGTACGTGGGCGCGGAGGCGCGGCGGTTCGTGGTGCCGATGGGC
TACCTCCACCAGCCGGCGTTCCGGGCGCTCATGGAGCTGGCGGCCGAGGAGTTCGGCTTCGGCCAGGCCGGCGGGCTCCG
CATCCCCTGCCGCGAGGAGGACTTCGTCGCCATCGTCGCCGCGCTCGAGGCCACGGCCGAGTCGCGCCAGCGCAGGCGGA
GCGCGGCCGGCAGGAAGAGCAGGAGCAACGCCACACCATGGTGATTGATCAAGCTCATGCATGGTGACGTAGAAGAAGAG
TTTTTTGTCCCGGTCATGTGGAAGGACGCCTTGTCTTTGCGTAAGGCGAGCATGGCTGTCGCCGATGATCCGTCCGATTT
CCGAGTCACCAATTCACCATCGGTTTGCCAGTAGATAGATAGC-----------CTCGAGTCTGGAATAATTAATGATGA
TCTTGTAA--GGGCTC-----------------------------------------TGGAACTGACAGTTCAAAGATGA
TTTTGATTCCCATGATACATGCATGCATCCTCATGTTCCTCCAGCTGATCAGAAGATTTGAGCCAGATATTGTTCTCCAG
AAATTATGTTTTTATTTTTCTTTACAATTAAAAAGGTGTCCTCTTATTTATGTCTACTCAAATATGAACAGCCTGTATCC
AAATGGAATCTCCTGCTAGCATTCTGCAAGCTGGAGAAGCTGCACTCACATATATTCTGGTTATCTGTTTAGAATGTTCC
TCAAAATTGCTATAACATGCACCTAGCATGTTCTATTAATATCTAAGATACTTGCAGCAGCTGGGACAACTGAAACTGGT
GGCATAATTAACACCATAATTCCTGGGAGAGAGG-ACTTCTCCTCCTTTTACTGTTTTTCTTTTCCAAAAACCAGGAGAA
ACACAACCTTCT--------GTACATGAATAGCTAGTCCCCACACTAACCTATTTATGTCAATATGCAATCATGCCACAT
CAGCATGCGACGTGCATGGGAAAAAAACTCACCTCAACATCCAATCATGCAGAAAAAAGTTCACCTCACTATGCAAATAT
GTGCATGAGAATTTACATTTTG----------------------------------------------------------
-------------------------TTATGCTATTTATATTTAATAGATGTTTTACAACTATACTATGATCAAACACAAT
AAATCATATGTA--------------------------------------------------------------------
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-------------------------------------------------------------GTTTTAGTTTTACTTCTCA
TATTATTACTCAAAATATCCATGTACCATATATGCACGTAAATATCGCT--AAAATATGTTTTATGTTCTATATGTAAAA
CACAATAAATGTTCTATATCTAACCTCAATATCCAATCATG
>chr6D_1
CAATAGCGGTTTGTGCATTGTTTTCTCATTATTTTATGCATGAGAGGGAACGTGTGTACTACTA---GTATGGTTAACTT
AGGCAGAAGCTAGTTAATTAATTGAAGTGTATTGGGTG---------------------------------CACACACCT
TAACTCTCCAGATCTGTGGTTATTTAGACTGAAATTAACCAGCTAACATTAGTCGGTGAATTTAAAAGCAGTTGCATATT
TTACTCCCTTTCTGAAAGATGGGTTCTTCTAAAAAAAACGGACTACCGCTCAAACAGCAAAACTGGTGGAAGAACAGCTA
GTACACTAGTACAGCTATACAGCTAATTGACTCGTTCATTCCATATAACAAATAAATGAAGATAAGACGTGTAACCGTAT
CACCGTCCCCTACATGCATGGATCCAAGCCCCTAACCAAAACCATTGGAGAAAAACACATATGAACACACGCCATTCCCT
TGACCTACTCCACA--TACGCTTTCATTACACTGTCAATGGCAGCCAGCTGAACATTTGCACAATAATCAAGAAACCATA
CCCATCCAAGAGAAATAATACAGTAGCTTTTTTGGGTAAAGAAGAGAAATAATAGATGATATGTGCACAACAATAAGATA
TTCTCCATAATAATATATTCCATGTGTGTTGTTTATAACATATTCTCCAAGAGTAGAATAAGATATGAGCCTTGCTGCAA
GGCTGCTCCAGCTATGCCAAAGGCAGGAGGCTCCAAGAACAAGAGCCGCCCTTTGTCTCCAACCCCAACCACC-------
---CCGCCCATAATATACAACCGCCCTCGCAAGAACCACCAGACCTCACATGCTTTGATCCCTCCCCCT-----------
----TCCTCCTCCTCCTCCTCTTAACCTCCCCCGCCGCAGCCCGTGCTCTCCCGTACTTCTTGGAGCCGATCATCGCAAG
ATCATCAACCAGCTGCCACTCTTC----GCCGTTTCTTTGGCACCACACCACCGCCGATCGCCGAGATGATGATGGGGTA
CTTCTGGGCGCCGAGGAAGTCGGCGGCGGTGGAGAGGGACCAGAGCCTGCGGGCGGGGCTGCTCGTCGACGGCGGCAGCG
GCGAGGCGGCGGCGGTGCCCAAGGGGTACTTTGCGGTGTACGTGGGCGCCGAGGCGCGGCGGTTCGTGGTGCCGATGGGC
TACCTCCACCAGCCGGCGTTCCGGGCGCTCATGGAGCTGGCGGCCGAGGAGTTCGGCTTCGGCCAGGCCGGCGGGCTCCG
CATCCCCTGCCGCGAGGAGGACTTCGTCGCCATCGTCGCCGCGCTCGAGGCCACGGCCGAGTCGCGCCAGCGCAGGCGGA
GCGCCGCCGGCAGGAGGAGCAGGAGCAACGCCACACCATGGTGATTGATCATGCTCGTGCATGGCGACGTAGAACAAGAG
TTTTTTGTCCCGGTCATGTGGAAGGACGCCGTGTCTTTGCGTAGCGCAAGCATGGCTGCCGCCGATGATCCGTCCGATTT
CCGAGTCACCAATTCACCATCGGTTTGCCAGTAGATAGATAGTCTCTCACGAGTCTCGAGTCTGGAATGATTAATGATGA
TCTTGTAA--GGGCTCTTCCTTTTTGTTTTCGAGCAACATCGATCTTGTAAGGGCTCTGAAACTGACAATTGAAAGATGA
TTTTGATTCCCATGATACATGGCTGCATCCTCATATTCCTCCAGCTGATCAGAAGATTTGAGCCAGATATTGTTCTCCAG
AAATTAAGGG-TTTTTTTTCTTTACAATTAAATAGGTGTCCTCTTATTTATGTCTACTCAAATATGAACAGCCTGTATCC
AAATGGAATCTCCTGCTAGCATTCTGCAAGCTGGAGAAGCTGCACTCACATATATTCTGGTTATCTGTTTAGAATGTTCC
TCAAAATTGCTATAACATGCACCTAGCATGTTCTATTAATATCTAAGAAGATACTTGCAGCTGGGACAAATGAAACAGGT
GGCACAATTAACCGCATAATTCCTGGGAGAGAAG-ACTTCTCCTTCTTTTACTGTTTTTTTCCTCGAAAAACCAAGAGAA
ACACAACCTTCTAATCTTCTGTTTATGAAGAGCTAGCCCCCACACTAACCTATTTATTTCAACATGAAAGCATGCCACAT
CAGCATGCGACATGCATGA-AAAAAAACTCACCTCAACATCCAATCATGCAGAAAAAAGTTCACCTCACTTTGCAAACAT
GTGCATGAGAATTTACATTCTACTCCCTCTGTAAACTAATATAAGAGCGTTTAGATTACTATTTTAGTGATCTAAACGCT
CTTATATTAGTTTACAGAGGGAGTATTATGCTATTTATATTTAATAAATGTTTTACAACTATACAATGATCAAACACAAT
AAATCATATGTACTACCTCGGTCTAGATGAATAAGTCATTGGTTTAGTTCTAGGTCATCGATTTGAGCAATTAAATATGT
GTTATATGTCATGAAAAGTATATCACTAGATTTCTACACGGATGTAGTTTCTAAATATATATTTTTTGTCACATATAATA
CATATTTAGATAGTTAAATCGTCGACCTAGACGGAGGGAGGGAGTAGTTTTCTACGTAAATGACTTATTCACATATAATA
CATATAATACATATCACTAGATTTCTACGTAAATGACTTATTCACCGAGACGGAGGGAGTAGTTTTAGTTTTACTTCTCA
TATTATTACTCAAAATATCCATGTACCATACAAA----TAAATATCACTAACATATATGTTCTATGTTCTATATCTAA--
-----------------------------------------
>chr6A_1
CAATAGCGCTTTGTGCATTGTTTTCTCATTATTTTATGTATGAGAGGG----TGTGTACTACTA---GTATGGTTAACTT
AGGCAGAAGCTAGTTAATTAATTGAAGTGTATTGGGTACA-------------------------------CACACGCCT
TAACTCTACAGATCTGCGGTTAATTAGACTGAAATTAACCAGCTAACACTAGTCGGTGAATTTAAAAACAGATGCATA-T
TTTCCCCCTTTATGAAAGATGGATTCTTCTAAAAAAAACGGACTACCGCTCAAACAGCAGAACTGGTGGAAGAACAGCTA
GTACACTGGTACAGCTATACAGCTAATTGACTCGTTCA-TCCATATAACAAATAAATGAAGATAAGACGTGTAACCATAT
CACCGTCCCCTACATG----GATCCAAGTCCCTAACCAAAACCATTGAAGAAAAGCACATATGAACACACGCCATTCCAT
TGACCCACTCCACA--TACGCTTTCATTACACTGCCAATGACAGCCAGCTGAACATTTGAGCAATAATCAAGAAAGCATA
CCCGTCCAAGAGAAATAATACAGTAGCTT-TTTGGGTAAAGAAGAGAAATAATAGCTGATATGTGCACAATAGTAAGATA
TTCTCCATAATAATATATTCCATGTGTGTTGTTTATAACATATTCTCCAAGAGTAGAATAAGATATGAGCCTTGCTGCAA
GGCTGCTCCAGCTATGCCAAAGGCAGGAGGCTCCAAGAACAAGAGCCGCCCGTTGTTTCCAACCCCAACCACCCCACCCC
ACCCCGCCCATAATATACGCCCGCCCTCGCAAGAACACCCAGACCTCACATGCTTTGATCCCTCACCCT-----------
----TCCTCCTCCTCCTCCTCTTAACCTCCTCCGCCGCAGCCCGTGCTCTCCCGTACTTCTTGGAGCCGATCATCGCAAG
GTCGACCAACCA--GCCACTCTTC----ACCGTTTCTTTGGCGCCACACCACCGCCGGTCGCCGAGATGATGATGGGGTA
CTTCTGGGCGCCGAGGAAGTCGGCGGCGGTAGAGAGGGACCAGAGCCTGCGGGCGGGGCTGCTCGTCGACGGAGGCAGCG
GCGAGGCGGCGGCGGTGCCCAAGGGGTACTTCGCGGTGTACGTGGGCGCGGAGGCGCGGCGGTTCGTGGTGCCGATGAGC
TACCTCCACCAGCCGGCGTTCCGGGCGCTCATGGAGCTGGCGGCCGAGGAGTTCGGCTTCGGCCAGGCCGGCGGGCTCCG
CATCCCCTGCCGCGAGGAGGACTTCGTCGCCATCGTCGCCGCACTCGAGGCCACGGCCGAGTCGCGCCAGCGCCGGCGGA
GCGCCGCCGGCAGGAAGAGCAGGAGCAACGCCACACCATGGTGATTGATCATGCTCATGCATGGCGACGTAGAAGAAGAG
TTTTTTGTCCCGGTCATGTGGATGGACGCCGTGTCTTTGCGTAGCGCGAGCATGGCCGTCGCCGATGATCCGTCCGATTT
CCGAA--------TCACCATTGGTTTGCTAGTAGATAGATAATCTCTCACTCGTGTCTGGACTCTG--GAATAACGATGA
TCTTGTAAAGGGGCCCTTCTTTTTTGTTTTCGAGCAACATCGATCTTGTAAGGGCTCTGAAACTGACAATTGAAAGATGA
TTTTGATTTCCATGATACATGCATGCATCCTCATGTTCCTCCAGCTGATCAGAAGATTTGAGCCAGATATTGTTCTCCAG
AAATTGTGTTTTTATTTTTCTTTACAATTAAAAAGGTGTCCT----TTTATGTCTACTCAAATATGAACAGCCTGTATCC
AAATGGAATCTCCTGCTAGCATTCTGCAAGCTGGAGAAGCTGCACTCACATATATTCTGGTTATCTGTTTAGAATGTTCC
TCAAAATTGCTATAACATGCACCTAGCATGTTCTATTGATATCTAAGAAGATACTTGCAGCTGGGACAACTGAAACAGGT
GGCACAATTAACCCCATAATTCCTGGGAGAGAGGAACTTCTCCTCCTTTTACTGTTTTTTTCCTCAAAAAACTAGGAGAA
ACACTACCTTCTAATCTTGTGTATATGAATAGCTAG-CCCCACACTAACCTATTTATCTCAATATGCATGCATGCCACAT
CAGCATGCGACTTGCATGGT-AAAAAACTCACCTCAACATCCAATCATGCGGGAAAAAGTTCACCTCACTCTGCAAACAT
GTGCATGAGAATTTACATTCTG----------------------------------------------------------
-------------------------TTATGCTATTTATATTTAATAAATATTTTACAACTATACAATGATCAAACATAAT
GAATCATAT-----------------------------------------------------------------------
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----------------------------------------------------------GTAGTTTTAGTTTTACTTCTCA
TAGTATTACTCAAAATATCCATGTACCATACAAGC----AAATATCACTAAAATATATGTTCTATGTTCTATATCTAAA-
-----------------------------------------
>SNPs
----------------------------------------------------------------SSS-------------
----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
-------------------------------S------------------------------------------------
---------------------------------------------------------S----------------------
----------------S---------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------SS-----S-------------------------------------S--------------------
----------------S---SSSSSSSS------S------S--------------------------------------
----------S-----------------S---------------------------------------------------
---------------------------------------------------------------------S----------
S------------------------S---------------S---------------------------SSSSSSSSSSS
SSSS----------------------------------------------------------------------------
----------------------S-SSSS----------------------------------------------------
---------------------------------------------------------------------S----------
-------S-----S--S---------------------------------------------------------------
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----S----------------------------------------------S------------S---------------
------------------------------S------------SS-----------------------------------
------------------------------------------S-------------------------S-----------
-----------------------------------------------------------S--------S--S--------
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------------------------------------------------SSS-SSSS--------------------S---
----S-------S----------------------------------------------S-SS--S--------------
-----------------------S------------S--------------------S-----------S----------
-----------S-------S--------------------------------------------------S------S--
-------------------S------------------------------------------------------------
----------------------------------------------S-----------------S---------------
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------------------------------S-S--SSS--------S------S-------S------------S----S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_502
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--ACCTACTCCACACATACGCC----------------------------------------------------------
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>reverse_1976
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-------------------------------------------------------AGCAGCTGGGACAACTGAAA-----
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