>input_sequence_82107
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ATGGCGGACGAGGGCGCGGGGGCATACGAGGACCTGCTGCCGGTGATGGCGGGGCGGCTGGGCACGGCGGGGCTGCTGTC
GGAGCTGCGGGCGGGGTTCCGGCTGCTGGCCGACCCGGCGCGGGGCGCCATCACGGCCGAGAGCCTGCGGCGCAGCGCGG
GGGCGGTGCTGGGCGTGGAGGGGATGACGGCGGAGGAGGCGCGGGCGATGGTGGGCGAGGGCGACCACGACGGCGACGGC
GCGCTCAGCGAGCAGGAGTTTTGCGTGCTCATGGTGCGGCTCAGCCCCGGCATCATGGCCGACGCCGAGGGCTGGCTCGA
GGAGGCCATCGCCGACGAGCTGGTCCCGCCGCCGCCGCCGC---CCGCGCCGGCCGCCTGA-------------------
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>chr6A_1_TraesCS6A01G065900
ATCTGCAGATGCTCGAGCGCGAGGCCGACGAGAAGGCGCGCCAGGCCCAGGCAGCGGCGGCAAAGCCCGACATCGCCGCC
GTCTGGAACACGGCGTTCCCCTGGGCCGGCCCTGCGCTGACGTTGATCGACCTCACCAGTCCCGACGCAGACGCCGCTGC
TGACGAGGACGCTTAGGGCAGCGCGTCGTCTTGTTTTCAGTGTTTTTATTAATGTAATGTGGACTTTCACCGGCCTTCGT
GGCCGGCTTTTATATTTAATTAAATGTATGTATTTATTTTCAAACTGCTAGCAATATTTTTTTTGGCACGCCGATGAAAT
GATTCGGGTCAGCGTTGGACGCTCGCACTGATCCAAACACAGCGCCGGACGTTTGTGTTCGTCGAGCCGATCTAAACGGA
CAAAAAGCGGACAAAAGCGTCATCCGTTTGGGTCGGTTCGTTGGAGTTGCTCTAACCTTTTGGCCAAGAAAAGTACTATT
TGCCGTAAACCACG-CCAGATCTCCGATATGGTCCATATGGACCAAGCCGGGTGAGCTCATAATCGAAAGGCATGATGAA
AAGGTCCACCCAGCATTTATACGCCCGGCCGGCCGGCTCCTCCCAGGAAGCTTCCTCCGACGACAAGCACCGCACGACCG
GGCCAGCGTCACGTCAGATCCTCCCTCCGCCGTCCCAGCCCCGTCACATCATCCGGTGCTCC------GCTCAGCTCACT
CGT--------CCCTCGT------GTGTACAGCCACTACCACGGGTGCCGTCCGGCCGTCCAGATATCTCCCCCTCCCCA
CCCGCGCAGCTTCCCGGAAGCTTCTCCCC-GAGATCGACATGGGGTCTCCGTCATCATCCTCTCGATCGTACCGTCCTAT
CCATCATGATCATCCGTCCTCACCTCCCCCTCCCTCCCCGCTTTATACAAGAGGCCAGCCAGCGCTCGGCTTCTTGCGCC
CCGTCGACGCAGAAACAACGACAGCGGCGACAGTTCTTCATTGATCGGAGCTCGAGCTGG------------------GC
ATGGCGGACGAGGGCGCGGGGGCATACGAGGACCTGCTGCCGGTGATGGCGGGGCGGCTGGGCACGGCGGGGCTGCTGTC
GGAGCTGCGGGCGGGGTTCCGGCTGCTGGCCGACCCGGCGCGGGGCGCCATCACGGCCGAGAGCCTGCGGCGCAGCGCGG
GGGCGGTGCTGGGCGTGGAGGGGATGACGGCGGAGGAGGCGCGGGCGATGGTGGGCGAGGGCGACCACGACGGCGACGGC
GCGCTCAGCGAGCAGGAGTTTTGCGTGCTCATGGTGCGGCTCAGCCCCGGCATCATGGCCGACGCCGAGGGCTGGCTCGA
GGAGGCCATCGCCGACGAGCTGGTCCCGCCGCCGCCGCCGC---CCGCGCCGGCCGCCTGAGCCGTCACCTGCATAGCTA
GCCATCTCGATTGTTATGTACTACTACTTGCATCGCTACTGACTCT---GTATGTTTGTTGTATCGCCGCCGTGTAGTCG
CCGTTGTTGTTTGA---GTACTTACATGGTGATGCTCTTTGAGGCTTCGAGCTAGACTTGACCATGGGCAGCCCGGCCCG
AAAAAGCCCGACCCGGCCAGGCCCGACGCTGCCCCCGGGTCGGGCTCGGGCCTAGATTTTGAGCCTGGTGACCGGGCCGG
GCCGGGCCCGGGCCTATCATTTTTGCAGTTTTCTAAAGGTCGGGCCGGGCCAGCCCGAGGCCTGGCGGACTTTTGCATGT
TTGGGCCAGGCGCGGGCCCAAAAAACAGGCCCGATGGCCAGGCCGGGCCGGGTTCGGGTCTGGGTTTTTTCGTCGGGCTT
GGCTAGGCCCGGCCCGAAGCCCGGCCCGGCCCGAGGTTTGGCCAGGTCTACTTCGAGCATTGCTTTATTCAGCGATGCTA
CACTTACGCTCAACTCATATGAGATTGTTGTTACGGGAACATGTGTCAATATTTGGTTGGAAGTTGAAATGAGGAGGACC
CCACAGTAAAAATTAGAGGGCACAAAAATTGATTGGGAGAGAGTCCGTAATAGGAAACCGTGCAATGCTACCCGTAAGTG
TAGCATTTTTGTTTTTCTACCTTCGACCTTCGTTTCTGAATATTCCAATATGGACCCGAAGCATGCCAAGTTGTTTGGTT
CGAGACAGTGGTTGATATCATACGGGAGCGTGTGTGTGATCTTTTTCAGGGAAGTTGATCGAGATGTTGCCTCTGTTCAT
GATGATGTAACAGAGGAATCTGCTTCTATGTAGTATACATTTGTTTTTGTTTTCCGGGTAATTCAGGAGCTGACAAAAAT
AATAAGTACTCCGTTTGGTTCTCTCTACGGGGTCTGGGGTCTGCGAAATCATGACCCAGGGATCTGGGAAATCATGACGT
TCTCTCTATGTGGTTGTTGATCTTCTA
>chrUn_454
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-----------------------------------------------------AACCTTTTCAACAAAAAGTGTACTATT
TGCCGTAAACCACCCCCAGATCTCCG---------ATATGGACCGAGCCGGCTGAGCTCATAACCGAAAGGCATAATGAA
AGGGTCCACCCAGCATTTACACACCCGGCCGGCCGGCTCCTCCCAGGAAGCTTCCTCCGACGACAAGCACCGCACGACCG
GGCCAGCGTCACGTCAGATCCTCCCTCCGCCGTCCCAGCCCCGTCACATCATCCCGTGCTCCGCTCAGGCTCAGCTC--A
GCTCACTCGTCCCCTCGTCCTCGTGTGTACAGCC---ACCACGGGTGTCGACCGGCCGTCCAAATATCT---CCTCCCCA
CCCGCGCAGCTTCCCGGAAGCTTCTCCCCCGAGATGGACATGGGGTCGCCGTCATCATCCTCTCGATCGTACCGTCCTAT
CCATCATG---ATCCGTCCTCACCTCCCCCTCCCTCCCCGCTTTATACAAGAGGCCAGCCAGCGCTCGGCTTCTTGCGCC
CCGTCGACGCAGAAACAACGACAGCGGCGACGGTTCTTCATCGATCCACTCCCGGCTGGTCGCTGCTTGGTCATCGGAGA
ATGGCTGACGATGGTGCTGGGGCGTACGAGGACCTGCTGCCGGTGATGGCGGGGCGGCTGGGCACGGCGGGGCTGCTGTC
GGAGCTGCGGGCGGGGTTCCGGCTGCTGGCCGACCCGGCGCGGGGCGCCATCACGCCCGAGAGCCTGCGGCGGAGCGCGG
GGGCGGTGCTGGGCGTGGCGGGGATGACGGCGGAGGAGGCGCGGGCGATGGTGGGCGAGGGCGACCAGGACGGCGACGGG
GCGCTGAGCGAGCAGGAGTTCTGCGTGCTCATGGTGCGGCTCAGCCCCGGCATCATGGCCGACGCCGAGGGATGGCTCGA
GGAGGCCATCGCCGATGAGCTGCTCCCGCCGCCGCCGCCGCCATCCGCGCCGGCCGCCTGAGCGGTCACCTGCATAGCTA
GCCATGTTGATTGTTATGTACTAGTACTTGCATCGCTACTGACTCT---GTATGTTTGTTGTATCATTGCCGTGTAGTCG
CCGTTGTTTGAGTGTTCGTACGTACATGGTGATGCTCTTTGAGGCCTTGAGCT---------------------------
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>chr6B_469
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--------------------------------------------------------------------AAATGTACTATT
TGCCATAAACCACCCCCAGATCTCCG---------ATATGAGCCAAGCCGGCTGAGCTCATAATCGAAAGGCATAATGAA
AGGGTCCATCCTGCATTTATACGCCCGGCCGGCCGGCTCCTCCCAGGAAGCTTCCTCCGACGACAAGCACTGCACGACCG
GGCCAGCGTCACGTCAGATCCTCCCTCCGCCGTCCCAGCCCCGTC-CATCATCCCGTGCTCT------GGCCTGCTCAGA
GCTCACTCGTCCCCTCGT------GTGTACAACCACTACCACGGGTGCCGACCGGCCGTCCAGATATCT---CCTCCCCA
CCCGCGCAGCTTCCCGGAAGCTTCTCCCCCGGGATGGACATGGGGTCGCCGTCATCATCCTCTCGATCGTACCGTCCTAT
CCATGATG---ATCCGTCCTCACCTCCTCCTCCCT-CCCGCTTTATACAAGAGGCCAGCCAGCGCTCGGCTTCTTGCGCC
CCGTCGACGCAGATACAACGACAGCGACGACGGTTCTTCATCGACCCACTCCCGGCCGGTCGCTCGA---TCATCGGAGC
ATGGCGGACGACGGCGCTGAGGCGTACGAGGACCTGCTGCCGGTGATGGCGGGGCGGCTGGGCACGGCGGGGCTGCTGTC
GGAGCTGCGGGCCGGGTTCCGGCTGCTGGCCGACCCGGCGCGGGGCGCCATCACGGCCGAGAGCCTGCGGCGGAGCGCGG
GGGCCGTGCTGGGCGTGGAGGGGATGACGGCCGAGGAGGCGCAGGTGATGGTGGGCGAGGGCGACCACGACGGCGACGGC
GCGCTCAGCGAGCAGGAGTTCTGCGTGCTCATGGTGCGGCTCAGCCCCGGCATCATGGCCGACGCCGAGGGCTGGCTCGA
GGAGGCCATCGCCGACGAGCTGCTCCCGCCGCCGCCGCCGCC---CGCGCCGGCCGCCTGAGCGGTCACCGGCATAGCTA
GCCATCTCGATTGTTATGTACTACTACTTGCATCGATACTGACTTGTACGTATGTTTGTTGTATCGCCGCCGTGTAGCCG
CCGTTGTTTGAGTGTTCGTACGTACATGGTGATGCTCTCCGAGGCTTTGAGCT---------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------SSS---S---S--------
-------------S------------SSSSSSSSS----------------S----------------------S-----
-S------------------------------------------------------------------------------
------------------------------------------------------S-----------------------SS
SS------------------------------------------------S------------------SSS--------
-----------------------------------S-----------S--------------------------------
--------SSS---------------------------------------------------------------------
-------------------------------S---------S----SSSS-S--SS-S-S--------------------
-----------S-----S-----S--------------------------------------------------------
------------------------------------------------------------------------S-------
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--------------------S-----------------------------------------------------------
----------------------S----------------------------------------S----------------
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--------SSSSSS-------S-------------------------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_398
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----------------------------------------------------------TCGTCGAGCCGATCTAAACG--
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>reverse_2339
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------------------TTCTCTCTACGGGGTCTGGG------------------------------------------
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