>input_sequence_82042
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----------------------------------------------------------ATGGAGCGTCCTTCTTCCTACC
ACGCGAGCAGCGCTGCTCTCCTGCTGGCTCTCCTTCTATGCTGTTCCTTGGTGTGCTCGGCCGCGGCGCCCCCAGGTAAA
GTACTCAGACTGTATCATTCT--CCTTTCTTCCCTCTAATATATAGAGGTCAGTAATTTTCATCTGTGCATGTGGTTACA
TGTGAATTGATGACGATAAAAAT--AA---TACATGCATGCAGTATTTCTGGACGGAGACCATGACGGCCAAAGTCCACC
GGCGCCTTTTCCCTCACGCCACAGGAAAACGGACTGTCCAGGCTGCGGCCACACC-------------------------
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---------------------------------------------------CGGCCGCCGGGGACATCGGCTGGCCGCAA
GACCTTGCAGGTTGCAGCCAACGTCGACCCTTCCGCATGA----------------------------------------
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>chr3A_1_TraesCS3A01G011300
CTAGACACTGTTATTTTTCTCTATGAACTTGGTCAAAGTTAGATAAGTTTGACTTTTTGAAAAAATAATACACCTTATAT
TTAAGAGCAGAGGGAGTATGTTCTTGGTGAAGATTTACTCGGCAATCTCTTCCACGTATTCTCGTGTGCAATATGAACAT
TCGAGAAAGCTCTGAGAACACTGGACTCGGTGTAGAACATGATGGGAGGAGCGGTGAGGTCGT-----------------
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-------GATGGCCAT----------CATAGATAGAGAGAG---------------------------------------
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-----------------------------------------AAGTAAGTGCATTGTTTATGATTCATTATATTTTTCT-G
GAAGAGTTTACAGTTTATTAGCTCTCATAGAAATGTCTTTCCATCATGGGTCGCATCTATTGAGGTTTTTAATTACATTT
CTTTGAAAATACAAAAAAAGATGGCTCCGGC-TGAAAGTAGTGTGAATCGAATCTCAAAACATCATGGTGGCAGTGAATA
TGTACATACACATTTTCATTTTCAAATAAAATAAATATAACTGCAAGAATTGAAATTAAAAAGATTTCTA-T-TTTTTTA
AGTAATTATAAAGACATATTTTGTTGAATAGTTATAAAAAA--A------------------------------------
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--------------------------------------------------------------TACTCCCTCTGGACCATA
ATATATGACGTTTTAGCAGCTCAAATTGAATTACTAAAACGTCGTATATTAAGGTATGGAGGGAGTATGTT---------
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-----------GTTAATGGGTCA-TTTGAATTGACATGACTGTTTGGTCAAAAGTCATGAGTGCATTGTACCATTATATA
TGAGGAAACC-AGCACTCGGAAAAAGTGAAAATATAAAGACCCTTCTGGAGATATTCAAGCAGGTAACCACTTGGAAAAA
GCATGCCTCTGACCT-----------GATTGTTGACGAAGAGTGGACTTTGACCTCTGAGCACACATATGTAGTGTATAT
TAAGAAACG-CGAGTGGCCAAGAACAGGTCATACCAAAATCTCGTGCGTACTCC--ACTACTAGTCCTCCCAACCATTCC
CCGTAAAAACTAAGAACGA----GAAAGAGGATGGCTGAGAAGCGCTGCGACACGATCATGGAGCGTCCTTCTTCCTACC
ACGCGAGCAGCGCTGCTCTCCTGCTGGCTCTCCTTCTATGCTGTTCCTTGGTGTGCTCGGCCGCGGCGCCCCCAGGTAAA
GTACTCAGACTGTATCATTCT--CCTTTCTTCCCTCTAATATATAGAGGTCAGTAATTTTCATCTGTGCATGTGGTTACA
TGTGAATTGATGACGATAAAAAT--AA---TACATGCATGCAGTATTTCTGGACGGAGACCATGACGGCCAAAGTCCACC
GGCGCCTTTTCCCTCACGCCACAGGAAAACGGACTGTCCAGGCTGCGGCCACACC-------------------------
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---------------------------------------------------CGGCCGCCGGGGACATCGGCTGGCCGCAA
GACCTTGCAGGTTGCAGCCAACGTCGACCCTTCCGCATGAAGCACCTCCGATACATATGCTGCACGCGATATTGTACTAT
GAATAGATCGTTATGT---AGTTACATGTACGATCAATGGTTTGTGCCAAAGATTTTAAATAAAGGATCAACTAGCTATC
G-------------------------------------------------------------------------------
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----------------------------------------------TGCGTAGAGTGCAGCCGCCGTCTCCTCCACCTCC
AAAAAAAAAGCTAGAGTTCGTGCCTCTTGCCGGCACCGCCGCAAGTCCGTCTCGTCTCCGGTGGCCCTAGGGCCATGAGG
ACGCGATGGATCCTTGCAAGTGCCAGCAGAAGGGCTCCGTTGTTAGTCATTCCTTTGAATTTTGTTAGGGTTTATGTCCT
TCTGAGAAAGGCAATACCACGACGGCTCCCTAAAGATGATATAAAGGTCTCCCCACCAAGCCCCTGTTCCAGTGATGCGC
CTTCGGCTCGGTATATGTTTTCATTATTATTATTTTTGAAATTACTAAATTCTGAACCATATGGATTTTGCATCAGATTC
GAATGATGCAGATCCCGGCCATTTTTTATTCGGACGGCGATAGCTGAACATGTGGTTAGTTCGCGAGCGTAATCCCGATC
CCGTATTTTCTCC----------------TATCTCCTCCTATGCGTCCTTTCGGGAACAAGTACATGTTGTTTTTTAACA
ACGAGCTCATGAACATTTTCATTAT--TTTTA---CTTTTTAGACCTGTGTACATTTT----------------------
------CATTAAACAAACCACACCAACGTTGTTATTGAACAAACCCTATGATTGTTGTGCCGGCCCGGCCCGGCCCGAGC
TCCCTGCCAGTTAAC-TAGATAATAGGCATTATGGCCAGGCACCC------------------------CTATTTCTCGC
ATTGGAGGCCATGGCAAGGAATACTTTACCCGACATGGATGGCAGTATGATCTTCGGATTGGCCGTCCTACGTCTTAGGC
ATTATACGGTTTCCACATGATTACTTATATTCCACCTTTTTTCT------------------------------------
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ATTTTTTTTAGAACGTGGACATGGTTATAGCTGTGTGCATCTTAGTTATGCAGAGGCCGTTTGTAATGCTTAAACCTT--
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>chr3A_95
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--------------AGTATGGTCTTGGTCAAGATTTACTTGGCACTCTCTTCCACGTATTCTCATGTGCAATATGAACAT
TCGAGAAAGCTCTGAGAACACTGGACTCGGTGTAGAAGATGATGGGAGGAGCCGTGGGGCCGT-----------------
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-------GATGGGCATGAGAGAGAGAGAGAGAGAGAGAGAG---------------------------------------
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-----------------------------------------AAGTAAGTGCATTGTTTATGATTCATTATCTTTT-CT-G
GTGGCGTCTACAATTTATTAGCTCTCAA------------ACATCGTGGATCACATCTATTGATGTTTTTA----CATTT
CTTCGAAAATACAAAAAAAGATGGCTCCGGC-TGAATGTAGTGTGAATCGAATCTCAAAATATCATGGTGGCTGTGAATA
TGTACATATACATTTTCATTTTCAAAGAAAATAAATATAACCAAGAAGTCA-AAATTAAAAAGATTTCTT-T-TTTAAAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGA
GATTTCCCCACCTGAATTTCTATATATGGGGGCCAGAATGCCCAGGTAAACAGCATGCACAAGTACATTTTACGGGGAGG
GGCGAGAGAGGGGGGAAGGAGGCGGCAGGTTACACTCATCAGGCATGCATCAGGCAGCAGGAGTGTTTGCCAGGCAGCCA
AGCCATGCCTCTGACGCCTGTTTCAGAGCAACAGGCAGACGCACCCGCCAAAGCACGGCGTCTTCTCTACACAACAGCAG
TAGACGAGGGAGTGACGGGGGCAACCCCTGGAAGACCACCGCGTTACGGTGCTTCCAAAGTTGCCAACAACAAAGGAGGA
GGAAGGTCGACCCCGTCCGCACCGGCACGGAGTTGGGAGCTTGCATAGTGTGCAACAGCTTGACGGATGAGACCGACGGG
ACAACCCCACCGTTAGTGGGTTA-TTTACATTGGCACGACCGTTTGGTCAAAAGGCATGAGTGCATTGTACTGTCATATA
TGAGGAAACC-AGCACTAGGAAAAAGTGAAGATATAA-GACCCTTCCGGAGAGATTTAAGCAGGTAACCACTTGGAAAAA
GCATGCCTCTGAGCT-----------GA-------------GTGGACTTTCACCTATGAGCATACATATGTAGTGTATAT
TAAGAAACG-CGAGTGGCCAAGAACAGATCATACCAAAATCTTGTGCGTACTCC--ACTACTAGTCCTCCCAACCATTCC
TTGTAGAA---ACTAAGAACGGGGAAAGAGAATGGCTGAGAAGCTCCCCGACATGATCATGGAGCGTC---CTTCGTACC
ATGCACGCAGCGCTGCTCTCCTGCTGGCTCTCCTTCTATGCTGTTCCTTGGTGTGCTCGGCC---------CCAGGTAAA
GTACTCAGACTGTATCCTTCT--CCTTTCTTCCCTCCAATATATAGAAGTCAGTAATTTTCATCTGTGCATGTGGTCACA
TCTGAATTGATGACGATAAAAAATTG------CATGCTTGCAGTATTTCTGGACGGAGACCGTGACGGCCAACGTCCTCC
GGCGCCTATTCCCTCGCATGGGAAGAAAACAGATTGCCCAGGCTGCGGCCACACC-------------------------
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---------------------------------------------------CGGCCGCCGGGGACATCGGCTCGCCGGAA
GACATTGCAGGTTGCAGCCAACGTTGACCCTTCCGCATGAAGCACCTCCAATACATATGCTACACGCGATATAGTACTAT
GAATAGATCG-TATGT---AGTTACATGTATGATCAATGGGTTGTGCCAAAGATTTTAAATAAAGGATCAACTGGCTAGC
TAGTTACATGTACGCTGAGATGTCAAGTCATGTCTGGCTGACAGGTACTACGTTGTGTCATACCTAGTCGGCAGGTGCTA
CGCACGACAAGGTCTTTCAGAATCTTCGTGTCTGGATGGACGAGTGCGGGACAGACTGGCAAGGATGATGTGGATCTCTC
TTCTGAAGAGGGTTAGCGGTCCGATGAAGATAGCGGCGTCTAGAACGTACTAGTAAGTGTGCACATGCAACACACGTCTA
TTTGAATTAATAAGTGTGCACGCGCAACACGCATCTATTTAGATTAACATATTATACTAAACTTAATACAAGGCAATTTA
TTCATATACTTGAAATTTTTCTATAAAATACACGATCTCTTATTCCCAACTCGTACAAATAATTTGAATTATCGTTTCTC
CTTAATCAACATGTCTCCTGTATTAAAAGACCACCCACTTTTGACAATGTATAAGACTCAAAATTATTTAGAAGATTCAT
CATGATTCTTCATATGCACACATTTATGTAAGTATAGTCACACATGAAAATGTCACTTAGGACAAGTTAAGGAACCGTTT
CAGTGCCAACAAATTCCAGTCAAGAATTACACAAGATCGTCATGAACATATACAGAGAGAAGTGACCTCTCTTTCTCCGA
GATTGGTCGAACAACAAGTTTTTGTATATATCTATCCGACCGTACTACATATATACATATAACGATCGCGATTTCCTGAT
AGAAGACGATAGGATACGCTCACGATTAGTTTCCTAATAATTAGATGCGTTCATGATTAGTTATCTAATAGGATACGCTC
ACGATTAGTTTCCTAATAATTGGATGCGTCCGTGATTAATTTCCTAATAGGATGGCTCGTAATTATTTTCCTAATAATAG
GATGCACGCGTGTTTTTTTCCTAATAATAGAATGGGTTTGTGATTGGTTTCCTAATAATTAGATGTGCCCGTGATTAGTT
TCTTAATAGGACGTGTCAGTGATTATAGTTTCCTAATTGACCAGGCATGGACTTTCATATTTTCCTCCGCGGTGGAGTAC
GGTCAGTCAATGTAAATTACTAAGTACACACAGAGAATAGATTAGGTTAAGGCTAGCCGTTAGATTGAGTTTAGTGGGAC
TAATCATATGATGGTAATGTATCTGTGTACATTTTATGGGGTGCACTTAGAAAAAATAATGTTTGCTCTTTTATAAGTAG
TATAGATATAGATGCATGTGGTGTACGCTTTAGGTCTGCTGCACCAATTGTTGGTTCCGATACATTATGTGGATGGATAG
ACGACAACACCAAATTTAGATGTGGGGAGTGAGAGCACTCCACATTATCGAGTTTTGTAGGTGTAAGTGGTGGCTTTGGG
TGGCTTGATGTATATTCTTATTAGAACTTTGTTGAATAATAAATAAAGATAGTTGTATGCATCGATTGATACAAAGGCTG
GGGTCTTAACCTCCTATTTCAAAAAAAAAAACTAGTTACTTGTACGTACGCACGCCCAGCTTGATTTTTTTATGGACCTT
GTTGTCTTGTCTGGCCTGTGTTGCTGTGCTTGGCGCTTGTGCATGAGGGATTGAACCACCTTACGAAAACCTGGCACATG
CGTCCTTTCCGGAACAAGTACATGTTGTTTTTCAACAACGAGCTCTTGTAC-----------------------------
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----------------GTTTTCATTATTTTTACTTTTGAAATTACTAAATCCCGAACCACATGGATTTTGGATCAGATCC
GAACGATGCGGATCCCGTCCA-TTTTGAATTGGACGGCGATAGCTGATCATGTGGTTAGTTCATGAGTGTAATCCCCATC
CCGTATTTTCTCGTAACAAACTGCACACATATCTCCTCCTATGCGTCCTTTCCGGAACAACTATATGTTGTTTTTTAACA
ACGAGCTCATGAACATTTTCATTTTTATTTCA---TTTTTTAGACATGTGTACATTTTTTTTTGCGGGGGGGCATGTGTA
CATTTTCATTGAACAAACCACACCAAAGTGTTTATTGAATAAACCCGATGACTGCTGTGCCGGCCCGGCCCGGCCCGAGC
TCCCTATCAGTTAATTTAGATAATGGGCATTA------------------------------------------------
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>chr3D_97
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----------------TATGTTCTTGGTGAAGATTTACTTGGCAATTTCTTCCACGTATTCTCATGTGCAATATGAACAT
TCAAGAAAGCTCTGAGAACACTGGACTCGGTGTAGAAGATGATGGGAGGAGCGGTGAGGTTGT-----------------
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-------GCTGGGCAT----------GAGAGAGAGAGAGAGAGAGAGAGAGAGA--------------------------
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---------------------------------------GAGAGTAAGTGCATTGTTTATGACTCATTATCTTTTTCT-G
GAGGGGTTTACAATTTATTAGCTCTCATACAAATATATTTACATCATGGGTCCCATCTATTCAGGTCTTTA----CATTT
CTTTGAAAATACAAAAAAAGACGGCTCCGGC-TGAAACTAGTGCGAATCAAATCTCAAAACGTCATGGTGGCAGTGAATA
T-TACATATACATTTTCATTTTCAAAGAAAATAAATATAACCAAGAAGTCA-AAATTAAAAAGATTTCAATT-TTTTTTA
AATAACTGTAAAGACATATTTTGTTGAATAGTTATAAAAAA--A------------------------------------
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--------------------------------------------------------------T-----------------
--------------------------------------------------------------------GTT---------
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-----------GTTAATGGGTAA-TTTACATTGACATGACCGTTTGGTCAAAAGGCATGAGTGCATTGTACTATTATATA
TGAGGAAAGC-AGCACTGGGAAAAAGTTAAGATATAA-GACCCTTCGGGAGAAATTTAAGCAGGTAACCACTTGGAAAAA
GCATGCCTCTGAGCT-----------GA-------------GTGGACTTTCACCTATGAGCATACATATGT---GTATAT
TAAGAAACG-CGAGTGGCCAAGAACAGATCATACCAAAATCTTGTGCGTACTCC--ACTACTAGTCCTCCCAACCATTCC
TCGTAAAAACTACTAAGAACGGGGAGAGAGAATGGCTGAGAAGCGCTGCGACATGATCATGGAGCGTCCTTCTTCCTACC
ACGCACGCAGCGCTGCTCTCCTGCTGGCTCTCCTCCTATGCTGCGCCTTGGTGTGCTCGGCCACGGCGCCCCCAGGTAAA
GTACTC-GACTGTAT-ATTCT--CCTTTCTTCCCTCGAATATATAGAAGTTAGCAATTTTCATCCGTGCATGTGGTTGCA
TGTGAATTGGTGACTATAAAAAATAATACGTACGTGCGTGCAGTATTTCTGGACGGAGACCGTGACGGCCAAAGTCCTCC
GGCGCCTTTTCCCTCACGCCACAGGAAAACGGACTGCCCAGGCTGCGGCCACACGGGGACATCGGCACGCCGGAAGACCT
TGGAGGTTGCAGCCAACGTCGACCCTTCCGCATGAAGCACCTCCGGTAGATATGCTGCATGCGATATGCTATGTGGAGCA
TATCGTTGTGTAGTTACATGTACGATCAATGGTTTGTGCCAAAGATTTTAAATAAAGGATCAGCTAGCGTCGAGGTTGAT
TTTATGTGGATCTTTGTTCTCCTGGCCGGACTGTGTTGCTGCGCGGTTGCGCGGCCGCCGGGGACATCGGCTGGCCGCAA
GACCTTGCAGGTTGCAGCCAACGTCGACCCTTCCGCATGAAGCACCTCCGATACATATGCTGCATGCGATATAGTACTAT
GAATATATTGTTATGTACCAGTTACATGTACGATCAATGGTTTGTGCCAAAGATTTTGAATAAACGATAAGCTAGCTATC
A-------------------------------------------------------------------------------
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----------------------------------------------TGCATA----------------------------
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>chr3B_97
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----------------TATGTTCTTGGTGAAG-TTTACTCGGTAATCTATTCCACATACTCTCATGTGCAATATGAACAT
TCGAGAAAGCTCTGAGAACACTAAACT---------AGCTGGCCGGAGGTGGGGGGAGGTGGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAGGTAGGTAGCCGATGGCTGAGAGA
GTTAATTTGATATCCGGCCAAGGGAATATTAGACCTATAGAGACTAAAGCTCCTCCCCTATATATACCAGTTCAGCACGC
TCACTTAGCCATTTGGTGCCACTTCTCTTCACAAGCTTCACAAGGGGGTGTAGGTTTGCTTTTGGTTCCTCTTATGCACA
CAAGGTGTTTGATGAAATGCCCTAAGAGGGTGAAACAAACATGATATGAAGTGTTGGAGCCACACTTGAGGTTCCTCATT
TATTTTTTCCTCCTCGATCGCGGTTAGCAACTTGAACCTTTCATGCATGTGTGTCATTGATAAAATATGCATGTGTGCAG
TTCATTGTTTAATTTATATTGTTTGTAGCTAGTTAGTTTAACAAATGCATGATGGTTAATTATATATTTTATATTATAAT
AATGCAGATGAATCGGCAATGGATGTACGGTAACCGACTCTCCGGCGAGTTCACTACGGGTTTGAAAGATTTCCTCGTAG
TGGCTAATGCGAACAAGCAGGGGGGTTTTGTTATCTGTCCATGTGTTATCTGTAAGAATCAGAAGGGTTACTCTTCCTCA
AGAGATGTTCACATGCATCTGCTTCGGCACGGTTTCATGCCAAGCTATAATTGTTGGACCAAGCATGGAGAAAGAGGGGT
TATAATGGAAGAAGATGAAGAAGGGGATGATTTCATCGATGAAAGCTATCTTGCTCATTTCGGTGATACTTTCATGGAGG
ATGCTGAAGGTGAAGGGGAAGGTGAAGAAGAGGCACGTGATGATCCCGTTGATGATCTTGGTCGGACCATTGCTGATGCA
CGGAGACGCTGCGAAA----------CTGAAAAGGAGAGGGAGAATTTGGATCGCATGTTAGAGGATCACAGAAAGGCGC
TGTACCCCGGATGCGATGATGGTCTGAAAAAGCTGGGCTGCACACTGGATTTGCTGAAATGGAAGGCAGAGGCAGGTGTA
GCTGACTCGGCATTTGAAAACTTGCTGAAAATGTTGAAGAATATGTTTCCAAAGGATAACGAGTTGCCCGCCAGTACGTA
CGAAGCAAAGAAGGTTGTCTGCCCTCTAGGTTTAGAGGTTCTGAAGATACATGCATGCATCAACGACTGCATCCTCTACC
GCGGTGAATACGAGAATTTGAATGAATGCCCGGTATGCACTGCATTGCGTTATAAGATCAGAGGCGATGACCCTGGTGAC
GATGTTGAGGGCCAGAATAGCAGAATTGCCGGAGTATGCGTTCATACTCATACATGCCTATATATAGGCTACAACATCAT
GAAATCAGCGGGGCAGACAGATCGAGAAATTAATCAAAGATGTTGAAGCCGGTGGCGTCATCTTCCTCGTCCGCCCGCTG
CTTGGCGGTCCTTGCAGCTGCACTCATCCTGTGTACGGCGAACGTTGAGCTTGTCCATGGAGGTAACTCGGCATGCCTAG
TCACATACACAATCTCCAATATATTCACAAAACTCCGCTGCGATGTCCGATCGATGTGCCAATCCATACATGTATGTGTG
TGCAGGTGACAGGGAAGTGCAGGCACCTCCAAGTCCTAGAGGGAGCAGTAGTAATAACCCAGGTCACTGCTGTCGTCGCC
TTCTGCAACTACAACCCACCACTGTCCTCGACGCCAGTCACCTTCCCCTCCAGCTGCAACGTCCTCAGGCGTAGTTCTTG
GGAGACATAGTTAATTACTCCCTCCATAAAGAAATATAGGAGGGTAAGTGGATTGTATACGATTCATTATCTTTTTCTGG
GAGGGATTTATGATTCATTAGCTCTCATACAAATACCATTACATCATGGGACCCATCTATTGAGGTTTTTG----CATTT
CTT-GAAAATACAGAAAA-GATTGCTTTGTC-TGAAAGTAGTGCAAATCTAATCTCAAAAAAAATC--------------
----------------------AAAGAAAAC--AAATTAACCAAGAAGTCA-AAATAAAAAT-ATTTCTA-A-CATTTAG
AAAATCTGTAAAGACTTTTTTTTTGAAAATTTATACTCCCTCCGTTTTTATTTACTCCACATATATTAGCTTTGGTCAAA
GTCAAATTTTGTAAACTTTAACAATGTTTATAGACAAAAATATTAACATATACAATAACAAATTAATACCATTAGATTCA
TTATTGAATACACTTTCACATCATATAGATTTGCTATTGTAAATGTTCATATATTTTTCTATAAACTTGGTCAAACATTA
TGAAGTTTGACTTTAATTAAACCTAATATGCAGAGTAAATAAAAACCGAGGAAGTATTTTGTT-----------------
--------------------------------------------------------------------GTT---------
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-----------GTTAATTGGACCGTTTACATTGACATGACTATTTGAGCAAAAGGCATGCATGCATTGTACTATTACATG
AGGATGAGGAAACCACTTGGAAAAAGTGAAATTATAA-ATACCTTCTGGCC-----------GGTAACCACTTGGTAAAA
GCATGCCTCTGTTGTCTGTTGACAAAGA-------------GTGGATTTCTACCTTTGAGCACATATGTGT---GTATAT
ATTAAGAGCCCGAGTGGCCAAGAACAGATCCCACTAAACTCTTGGCGTACTCCACAACTGTTAGTCCTCCCAACCATTCA
TCGTAGAACTC------------------------CTGAGAAGTGTTGTGACATGATAATGGAGCGTCCTACTTCCTACC
ACGCACGCAGCGCTGCTCTCCTGCTGGCTCTCCTCCTCTGTTGTTCCTTGGTGTGCTCGGCCGCGGCGGCACCAGGTAAA
CAGCTCGATTGTATCCTACTAGCCCTTTCTTCCCTCGAATAGAAAGCGTCAATTGTGTTCTAT-----CATGTGGTTACA
TGTGAATCGATGACGATCAAAGATAAA---TACATGCGTGCAGTATTTCTGGACGGAGACCGTGACGGACTACATCCTCC
GGCGCCCTTTCCCTCGCGCTCTAGGAGAACGGACTGCCCAGGCTGCGGCCACAAC-------------------------
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---------------------------------------------------AGGCCGCCGGGGACATCGGCACGCCGGAA
GACCTAGCAGGTTGCAGCCAACGTCGACCCTTCCGAATGAAGCACCTCCGATACATATGCTGCATGCGATATAGTACTAT
G--------------------TTACATGCATGATCAATGGTTTGTGCCAAAGACTTTGAATAAAGGATAAACTAGCTAGC
A-------------------------------------------------------------------------------
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----------------------------------------------TACGTACGACCAGCTTGATTGTGTGTT-GAGCTT
GTTGTCCTGGCCCGCCTGTGTTGCTGCCCTTTTTTTTAGAAATTATGCTTCTATCCAAATCATGAAATAATACAAAGTCT
TTGACCTGTAGAAGCACACCCTAACACATGCACAAAGAACAAGAAAAAACAGAGAGCATCCTAAAACAACCACTAAAACA
CGAAGATCTCCGGAGCTCTGTGTCATCATTCCTTAACCTTGTGAAAAGAGCCCTGCAACACAAGAATCTGCTAACTCACA
AAAACCTTAAACTGCACTGAAGAACATGCGATACAAGCACAAGG------------------------------------
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--------------------------------------------GTCCTTTCCGGAACAAGTACATGTTGTATTTTAACA
ACAAGCTCGTGTACATGGTCATAAT--TTTTTTATTTTTTTAGACATGTGTACATTTC----------------------
------CATTAAACAAACCACAACAAAGTTTTCATTGAACAAACCCGATGACTGGTGTGCTGGGCCGTCCCAGCCCGAGC
TCCATGCCTGTTAATTTAGATAATGGGCATTAAGTGGACTGGGAATGGTCTGACACAAAAGCGTGAGAGCTATGTCTCGC
ATTATGAGAGACGACGGTTGCAGGTCTCGCTGAAGATTTTTTTTGTCTCCTCTGGTAACTGGGCCAGCCCACTTAATAAA
AGAAAAGGTGGAGAAAAAACAACCGAAACCAGGGTTTAAATCTAGGTCTCCTGGATAGTAGCTAGCGACGGCAGCCACAA
CAACTGGGTCTCGATCCTGGGCGATATCTCCTCTGTCCATTACTATTAAAAGAGCAAATACAAATTCGCCTAACTTCATA
CAACAAACTGTACACGGGATAATTATATGACTTGAACTTTCACAAAGTTATGTTATTGTTAACTTCACATGTCTATCTAT
GATGCAATATGCATTTCAAGAGCAAATGTATATATAGGACAAATGTTTCCTACCACCAAGGGGTAGTTACCATCATCTGA
ATCTTGTATGTCGTATGTAGTATCTGTCAAAATCGAGAATATGAACATGTAGTATATTGTTGTATAGTATATAAGAACAT
TTGGGTTGTATATATCCTACTGTTTAGGTTGTATGTACTATTTTTTAGCATATTGTTTTATACGTACTAATATGAAGGTA
TTTTCAAATATACAAATAAACTGTGCATACTAAGTATATATCCTACTTCTAAAATATAATATTCCCACAGTAGAAAAATC
ACGTAGTAATTAGTGCATAGAAGGAAACGATTAAATGTGCCTATTTTTTTCTGTACATATTGGAAGTACCACTAACGTGT
CCTTTTACAAAGATTTAGGTATGCGTATGGTGGATATTGCCACTTCTACGTGGTGGGTATGAGGCTGAAATTGTTTCTCT
TTGTACAATACCTAGATGTGTTTAAGGTATATATGCAACCCAAATGTGATGTGATAGACCGATGTGATAGACCGATGTAT
TTCGTTCGTGTCTGCAGGTGGAAGGCCGGTGTCGGCCCCTCCTGCTCCCGTAGCGCAGGTGAGCCACCATGGGAGATGCA
CATAATGTTAACTCTGAAGGGATTCCCATGTAAATCAAATGATTGACTAATCAAAACTATGAGAGCGGGTCATGTTGGTA
TAAAAGTAAATGATGTTGTACGACCGTACTTTCTTACTCTTAATGGTGTAAGACAAGGTATTCTCTCCCCCCCCCCCCCC
CCCTTGCTTTTCAATCTTGCTGCTCCTGATTTGGTTATTATTTTAAATAATGCCAAAAAGCATTGGTATGTCAAATGAAA
GATGGGTGAATATAGTGAGGGAGGAGTAAACATGTTGTAATATGCAGATAATATGATATCCCTCTTTCCAGATAAATTTA
AAATTTATCTAATGTGCTTTTGAACCGATTTCAATTTTGTAACTAATTTTTCGTAAGAGAGACATTCTTATTTGGAGATG
TTATGAATAGATAAGAGGAATATACGAAAATCTTTACTTGTCAATTGGGGGAGCTACCTATGAAATACACGAGAGTTCCA
CCTCATAACCAGATAAGTGAGAATAGGGGGGGGGGGGGGGGGAGTCTAAGCGAGGGAATGGAGAGAGCCAAGCTAAGAGA
ATGGGAGCTTCATTGGCTGGCCCATGTTAGGGCATCCACAATGTTTAGAGGTTGTATGGCCTCTAAGCTAGGGTCCACAT
GCCTGCCTCTACACTTTTCCCAAAACTGTGTAGTATATGAAGTTTAGTTTGGCCTCTATGGTGGACCCATGGCAGGCACC
ATGCACATAAAAAAATAGGTTTTTTCAATCAACCAATCTAGCATACATCATGCACTAGTGAGCATGACAAGTAGGGACAA
AATATTAATTTAGTCTGAAGAGAAAGATGGAGGCGCCTCTTAGCTTGGAGTCCATGCTAACCATTTTAGCTTGGAGGAAG
TCATTTGCAGTGTATGGCGCCGGCCGCCAACTCATAGGAGGTGGCCATAGAATAATATGCTGGATAAAAAAAATTCATAA
ATATTACGTTGGATAAAAAAAATTCAAAAATAATACACCGTCTGCTCGTTGCAGGCCGACTGGCCTAGTCGGCCTACAGC
TGGCCGACTGGTCCCTGTCGGCCCACTGTGGGCTGATTGGGTCCTGTCGGCCCACTGTGGGCCGACTGAAGCTAATTGGC
TCGCTGTGGACTAATTGTTTTTGCAAAAAAAAGTAGGCATAAAAAATATATATTTTAAAAAATGTTAAGCATGTAATTAA
AAAATGTTAAACGTGTATAAAAATGTTCCTGATGTATACAAAAAATGTACAATATATATGCAAAAAAGTTGACATAAAAA
ATATGTTTTAGAAAGTGTTAAGCATGTATTTAAAAATTGTTAAATGTGTGTATAAAAAAAGTTATTTATACAAAAAATAT
AGAATGTGTATGAAAAAAAGTTGACACAAAAAACAATTCTAAATAATTATAAAAAAATGTTGTTAATGGGTCATTTACAT
TGACATGATCATTTGGTCAAAAGTCATGAGTGCATTGTACTATTATATATGAGGAAACCAGCACTGGGAAAAAGGGAAAA
TATAAAGACACTTCTGGAGAAATTTAAGCAGGTAACCACTTGGAAAAAGCATGCCTCTGAGCTGACTGTTGACAAAGAGT
GGACTTTTACCTCTGAGCCAGGGGCGGACCTAGGAATTGGCCACGACCCGGGCCCAGGCCTACTACAATGTCGCTATAGG
GCCCAAAAAACTACAGTTACCAAAGTACGTAATGTGCATGCCCCAGGCCAGGCCCCCCGCGAGTGGCCAAGAATAGATCA
TACCGAAATCTCGGGCGTACTCCGCTACTAGTCCTCCCAACCATTCCCCGTAAA
>chr3B_236
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-----------------------------AGAGAGAGAGAG---------------------------------------
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-----------------------------------------GAGTAAGTGCATTGTTTATGACTCATTATTTTTT-CT-G
GAGGGGTTTACAATTTAGTAGCTCCCATAAAAATATATTTACATCATGGGTCCTATCTATTGAGATTTTCA----GATTT
C-TTGAAAATACAAAAAAAGATGGCTCCGAGTTGAAAGTAGTGTGAATCGAATCTCAAAACGTCATGGTGGCAGTGAATA
TGTACACATACATTTTCATTTTAAAAGAAAA--AATATAACCAATAAGTCA-AAATAAAAAGTATTTCTTATATTTTTTA
AATAATTATAATGACAGATTTTGCCGAATAGTTATTAAAAGTTA------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------T-----------------
--------------------------------------------------------------------TTT---------
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-----------GTTAATGGGTCA-TTTATATTGACATGACCATTTGGTCAAAAGTCATGAGTGCATTGTACTATTATATA
TGAGGAAACC-AGCACTGGGAAAAAGTGAAAATATAAAGACACTTCTGGAGAAATTTAAGCAGGTAACCACTTGGAAAAA
GCATGCCTCTGACCT-----------GATTGTTGACGAAGAGTG------------------------------------
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>chrUn_236
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-----------------------------AGAGAGAGAGAG---------------------------------------
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-----------------------------------------GAGTAAGTGCATTGTTTATGACTCATTATTTTTT-CT-G
GAGGGGTTTACAATTTAGTAGCTCCCATAAAAATATATTTACATCATGGGTCCTATCTATTGAGATTTTCA----GATTT
C-TTGAAAATACAAAAAAAGATGGCTCCGAGTTGAAAGTAGTGTGAATCGAATCTCAAAACGTCATGGTGGCAGTGAATA
TGTACACATACATTTTCATTTTAAAAGAAAA--AATATAACCAATAAGTCA-AAATAAAAAGTATTTCTTATATTTTTTA
AATAATTATAATGACAGATTTTGCCGAATAGTTATTAAAAGTTA------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------T-----------------
--------------------------------------------------------------------TTT---------
--------------------------------------------------------------------------------
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-----------GTTAATGGGTCA-TTTATATTGACATGACCATTTGGTCAAAAGTCATGAGTGCATTGTACTATTATATA
TGAGGAAACC-AGCACTGGGAAAAAGTGAAAATATAAAGACACTTCTGGAGAAATTTAAGCAGGTAACCACTTGGAAAAA
GCATGCCTCTGACCT-----------GATTGTTGACGAAGAGTG------------------------------------
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------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS-------------------------------------------------S----------------
-------------------------------------S------------------------------------------
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------------S---------------S---S-----------------------------------------------
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----------------------------------------------------------------------S---------
--S-S-------S----------------S----S-----S-----------S------------------SSSS-----
--------------------------------------------------------------------------------
--------S-----------------S--------------SSSS-SSSSSS----------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------SSSSSS-SSS-SSS-SS
SSSS-SSSS-SSSSSSSS-SSSSSSSS-SS-SSSSSS-S-SSSSSSSSS-S---S-SSSS-S-S--S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------SS------------------------------------------S--------
-----------------S----------------------------------S---S-----------------------
--------------------------------------------------S----S------------------------
---------------------------S--------------S-------------------------------------
S-----------SS--SS------------S----------------------S--------------------------
----SS--------------------------------------------------------------------------
------------------------------------S-------------------------------------------
----------------------S--------------S-----------------------S---------------S--
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------SSSSSSSSSS-SSS-S-SS-SSSS-SSS
SSSSSSSSS---S-SS-SS--SS--S-SSSS---S-SSSS---S--S-----SSS-SS-SS-S-SSS--SSS-S-S--S-
SS--SS--S-SSSSSS--SSSSSSSS--SSSSSSSSSSSSS-S--S-S-SSSSSSSS-SSS-SSSSSSSSSSSSSSSS-S
SSSSSSSSSSSSS-SSS-SSSSSSSSSSSSSSSSS-SSS-S-S--SSSSS---SS-S-SS-SSSSS-SSSSSSSS-SSSS
SSSSSSS-SSSSSSSS------------S---S-----------------S-S------S----------S-------S-
---S-----S-------S---S----S-S-S----------------S--------------SS---S--------S---
------------S---------------------------------------S---------------------------
-----------------------------------S---------S----------------------------------
--------------------------S---S---------------S----S--S-------------------------
--------------S---------S-------S-SSS-SSSSSSS----------------------------S------
---SSSS-SS-S-S-SSSSSSSSS-S-SS-S--SSSSSS-SSSS--S-SS---SSSS-S---S-SSS-SSSS-SSSSSSS
-SS-S-S-SSSSSS-S-SSSSSS-SS-SSSSSSSSS-SSS-SSS------------------------------------
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--S-S--------S---SSS-SSS-SSSSSSSSSSSSSS-SSS-SS-S--S-S-SSSSSSS-SSSS-SSSS---SSS---
--------------------------------------------------------------------------------
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------------------------------------------------------
>forward_3361
--------------------------------------------------------------------------------
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------------------------------------------------------------CTAGTCCTCCCAACCATTCC
C-------------------------------------------------------------------------------
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>reverse_5999
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------------------------------------------------------------------------------TC
GAATGATGCAGATCCCGG--------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
