>input_sequence_82009
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---------------------------------------------------------------ATGCTCCGACGCGCGGC
CTTCTTGGTACATGGGCGCGCGGCCTGGCTCCCTCGCCGTCCAGTGACGGCCGCGGCAGCACTGGTCCGACGCCGCCCGG
AGCCGGATGCCCGCCTCCGCGCCGTCGAGGGCCGGGGCTACGCGCGCATGGCGCGGCGGATGCCTCCCACGAGGCCTGAC
GGGTACTCCACATCAGACGGCGAGGCCGACGCCTACGGCGACGTCGAGGACCTGGAGCCGGTGGAGCCGGCGGCCGCCGC
GGACGGCGAGGAGGACGCCTCCGATGGGGAGGGGTGGGACGGGTTCACGCTGGACATGGGCGCCGGATCCATCGTGGACA
ATGACGATGAGGAGGAGGAGGAG---------------------------GAAGAGGAAGAGGAGAAGTAA---------
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>chr5B_1_TraesCS5B01G415300
CTGCTGCCGGCTCATGGGTGGAGGAGATTAAAGCGATGCTTCGGTCTACGGAGGAGTCCAAGGTGACTTGGATTCGTCGG
TCTGGGAATGTAGCCGCTCATAAACTAGCAAAAGTAGGGGTAGGGGAGAACCGCTCGGAGATTTGGGTGGGCTCGCCACC
AGATTTTATTTTAGATGTAATTTCAAACGACATTCCTAGTTTCGGTTAAATAAAGCGGCATGTTTTTCCCCTCAAAAAAA
AAAAAAGAACCCCAAGCCGCATGGCCGGACGGCGCTCCTACCGTCGCCCAGAACCTGATTGTCTATGATCCTGTTGGTTA
ATGGATAAGCAATGTTTCCATGTAACAGAAAAGGTGTGCTTTTGTTGAATAAAGATCCCCAAATTCCACGCAAAGAAAAA
AATCAATGGTGAGAGCTCTGGTCTAATCAAGTATGCCCATTGACATTTCGAGTGAAAGTAGCACAAATATTTTTGCATTT
CTAACCAATCTAGAAGGTACTTTGTGCGAATACCTGAGAATTTTTTTTCACCAGCAAAAATGTCTCCTTACCTTTATTAC
TCAGAGTTTCGTCAACAGAAATTGAAAAAAAAATCCTACTTTTGCTTCGTTTTTTTTAGGGTTTCCTACTTTTGCTGGGC
TCGGCTATTCTGCACAGCCTGTATGCCTCGTGGGCCTCGTGGGCCTTCGCTTGCGTACGTCCGGTGTCCCTTGAAAAAAA
AATAGGCATCCGGCGTCCCCCACTACGAGAAGGAGAAACAATTCTGCCGCCGCCGCCGCCGCCGCCTCATCATCTTCTTC
CCCATCCCCTCCTCCACATCCCCGCCGTTTCTTTGTTGCAGAATCCCGCGAGCCGCTCCGCTCGCCGCCGTTTCGCCCTG
CGGCTTCGGTAACATCGCGGTACGCTCTCCTTTCGCCCCTGTCGTTCTAGCTTCTGGGGAAAGGTTCAGTAT--------
----------GCACTCATCCGGTTCCCACGCTTTGGCACAGCACAGA-----CGCGGCACGGCATGCTCCGACGCGCGGC
CTTCTTGGTACATGGGCGCGCGGCCTGGCTCCCTCGCCGTCCAGTGACGGCCGCGGCAGCACTGGTCCGACGCCGCCCGG
AGCCGGATGCCCGCCTCCGCGCCGTCGAGGGCCGGGGCTACGCGCGCATGGCGCGGCGGATGCCTCCCACGAGGCCTGAC
GGGTACTCCACATCAGACGGCGAGGCCGACGCCTACGGCGACGTCGAGGACCTGGAGCCGGTGGAGCCGGCGGCCGCCGC
GGACGGCGAGGAGGACGCCTCCGATGGGGAGGGGTGGGACGGGTTCACGCTGGACATGGGCGCCGGATCCATCGTGGACA
ATGACGATGAGGAGGAGGAGGAGGAAGAGGAAGAGGAGAAGTAATGTGAGGAAGAGGAAGAGGAGAAGTAATGTGAGGGT
-----------------CGCAAGCAAGGTGTTTGTTGAAATGACCAAGGCCATTGG------------------------
-------------CAATGGTAGTATTTGATGAGTTGAACTGTTAAATAATCCGTGTACTACTCCCGATTCTAGTAGTTTG
TTTTCACCTTGGATTGGGATTCACCGTTCGGTTACCCGCATAAAAAAAGGGATTCACCGTTCGGTTGTAGCAGCTCTCCT
AAACCGTGCCTCCCATTGCTTTTTTATTTACGGCAGACTCCTAAGCTAG-----TACAAGATGCGAGAGACCCTAGACCG
CACGCCCAGTTACC------TCGCGGTGGATCTCATCTCCCTCTCGAAATCATCG-------CTCCCGGTGGATCAAGAC
GAGAGGGCCAAAAAGAAAAGGCAATGGGAGTGGTGCACAGCTCCACAATGTCGAAACGTTGGTGCAGCCGGACAGCGGCG
GCGCCGTCGTGGGAGGCCCTCCCGGTGGATCTCCTTCTCGAAATCATTGCTCGCACAGACGTTACAACCATCGTCCGTTG
TGCCGCGACCAGCAGGATCCTTCGGCGCGGCATCCTCGACCCGGCCTTCCGGCGCAGCATCACGGCCCACGACCACGGCG
GCTTTGATCCCGCCCTCCTCCTCGGCGTCTCCTACCGGGAACGCGGCGATGTCACGACCCACCGCGTCATCCACACCCCA
GGGCCAACAAAGCTCGCTGCCCGCCTCGATGAACTTAGCTTCCCGGACTCGCTCACGGCCGTGGCCTCGCG-----GGGC
AGCCTGCTCGTCCTCTGCCGGCGTCCCCAAGGCCTTGATGTCAAGCTGCGGGTGTGCGACGCATTCACCGGTCATGTCAC
CTCACTCCCACCCGCCAGTTTGCCCGACGCGCACCTCCACGTCGTGCTCAGCATCGGTGACGCCGGCCGCTCCTTTGAGC
TGCTCGTCGCTGACAAGAACATACAGTTCCACCAGACATTCTCGTCCAAGGGCGGTCAATGGAGCACCATCCACCAGGTC
T
>chr5D_852
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---------------------------------------------------GCCGCATCGCTCGCCGCCGTTTCGCCCCG
CGGCTTCGGTGACATCGCGGTACGCTGTCCTTCCGCCCCTGTCGTTCTACCCTCTGGGGAAAGGTTCAGTATCGCCGCTC
AGGCACAGAGGCACTCATCCGGTTCCCACGCTTTGGCGCAGCAGAGCACAGGCGCGGCACGGCATGCTCCGCCGCGCGGC
CTCCTTGCTACGCGGGCGCTCGGCCTGGATCCCCCGCCGGCCAGTGGCGGCCGCGGCGACACTGGCCCGACGCCGCCCGG
AGCCGGAGGCCCGCCCCCGCGCCGTCGAGGGCCGGGGCTACGCGCGCATGGCGCGGCGGATGCCGCCCACGAGGCCTGAC
GGGTACTCCACCTCCGACGGGGAGGCCGACGCCTACGGAGACGTCGAGGACC---------TGGAGCCGGCGGCCGCCGC
GGACGGCGAGGAGGACGCCTCCGATGGGGAGGGGTGGGACGGGTTCACGCTGGACATGGGCGCCGGATCCATCGTGGACA
ATGACGATGAGGAAGAGGAGGAGGAG---------------------------GAGGAAGAGGAGAAGTAATCCGAGGGT
CGCCGGCGAGCCGGAAGCGCAAGCAAGGTGTTTGTTGAAATGACCAAGGCCATTGTTTGCATGCTCGTTGCTCCAATACC
CATGTACTACTAACAATGGTAGTATTTGAAGAGTTGAACTGTCAAATAATCCGTGTACGACTCCCGATTCTAGTAGTTGG
TTTTCACCTTGGATTGGGA---------------------------------TTCACCGTTCGGTTGTAGCAGCTCTCCT
AAACCGTGCCTCACATTGCTTTTTTATTTACGGCAGACTCCTAGCTACTGCTCCTACAAGATGCGAGAGTCCCTGGATCG
CACGCCCAGTTACCTCGCGCTCGCGGTGG-----ATCTCCTTCTCGACATCATCG-------CTCCCGGTGGATCGAGAC
GGGAGGAGA---------------------------ACAACTCAACAATGTGGAAACGTTGGTGCGGCCGGACAGCGGCG
GTGCCGTCGTGGGAGCCCCTCCCGGTGGATCTCCTTCTCGAAATCATTGCTCGCACTGACGTTACAACCGTCGTCCGCTG
TGCCGCGACCGGCAGGATCCTTCGGCGCGGCATCCTCGACCCGGCCTTCCGGCGCAGCATCATGGCCCACGACCACGACG
GCTTTGATCCCGCCCTCCTCCTCGGCATCTCCTACCGGGAACGCGGCGATGTCACGACCCACCGCGTCATCCACACCCCA
GGGCCAACAAAGCTCACTGCCCGCCTCGACGAACTTAGCTTCCCGGACTCGCTCAGGGCCGTGGCCTCGCG-----GGGC
AGCCTGGTCGTCCTCTGCCGGCACCCCCAAGGCCTTGATGTCAAGCTGCGGGTGTGTGATGCATTCACCGGTCATGTTAC
CTCACTCCCACCCGCGAGTTTGCCCGGCGTGTACCTCCACGTCGTGCTCAGCATCGGTGACGCCGGCCGCTCCTTCGAGC
TGCTCGTCGCGGACAAGAACATACAGTTCCACCAGACATTCTCGTCCAAGGGCGGTCAATGGAGCGCCGTCCACCAGGTC
T
>chr5A_852
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---------------------------------------------------GCCGCATCGCTCGCCGCCGTCTCGCCCCG
CGGCTTCGGTAAAATCGCGGTACGCTCTCCTTCCGCCCCTATCGTTCTAGCCTCCAGGGAAAGGTTCAGTGTCGCCGCTC
AGGCACAGAGGCACTCATCCGGCTCCCACGCTTTGGCACAGCACAGA-----CGC-GCACGGCATGCTCCGCCGCGCGGC
CTCCTTGCTACGCGGGCGCGCGGCCTGGCCCCCTCGCCGGCCAGTGACGGCCGCGGCGACACTGGCCCGACGCCGCCCGG
AGCCGGAGGCCCGCCCCCGCGCCGTCGACGGCCGGGGCTACGCGCGCATGGCGCGGCGGATGCCGCCCACGAGGCCTGAC
GGGTACTCCACCTCCGACGGCGAGGCCGACGCCTACGGAGACGTCGAGCACCTGGAGGACGTGGAGCCGGCGGCCGCCGC
GGACGGCGAGGAGGACGCCTCCGATGGGGAGGGGTGGGACGGGTTCACGCTGGACATGGGCGCCGGATCCATCGTGGACA
ATGACGATGAGGAGGAGGAGGA------------------------------AGAGGAAGTAGATAAGTAATGCGAGGGT
CGCCGGCGAGCCGGAAGCGCACGCAAGGTGTTTGCTGAAATGACCAAGGCCATTGTTTGCATGCTCGTTGCTCCAATACC
CATGTACTCGTAGC-ATGGTAGTATTTGAAGAGTTGAACTGTCAAATAATCCGTGTACTACTCCCGGTTCTAGTAGTTGG
TTTTCACCTGGGATTGGGA--------------------------------ATTCACAGTTCGGTTGCAGCAGCTCTCCT
-AACCGTGCCTCTCATTGCTTTTTTATTTACGGCAGACTCCTAGCTACTGCTCCTACAAGATGCGAGAGTCCCTGGATCG
CGCGCTCAGGTACCTCGCGCTCGCGGTGG-----ATCTCCTTCTCGACATCATCGCTCCCGCCTCCCGGTGGATCAAGA-
---------------------------------------------CAATGTGGAAACGTTGGTGCGGCCGGACAGCGGCG
GCGCCGTCGTCGGAGGACCTCCCGGTGGATCTCCTTCTAGAAATCATTGCTCGTGCCGACGTCACAGCCATCGTCCGCTG
TGCCGCGACCAGCAGGATCCTTCGGCGCGGCATCCTCGACCGGGCCTTCCGGCGCAGCATCATGGCCCGCCACCACGGCG
GCTTCGATCGCGCCCTCCTCCTCGGCGTCTCCTACCGGGAACGCGGCGATGTCACGACCCACCGCGTCATCCACACCCCA
GGGCCAACAAAGCTCGCTGCCCGCCTCGACGAACTTAGCTTCCCGGACCCGCTCAGGGCCGTGGCCTCGCGGGCCGGGGC
AGCCTGCTCGTCCTCTGCCGGCACCCCCAAGGCCTTGATGTCAAGCTGCGGGTGTGCGACGCATTCACCGGTCATGTCAC
CTCACTCCCACCCGCCAGTTTGCCGGACCCGTGCCTCCACGTCGTGCTCAGCATCGGTGACGCCCGCCGCTCCTTCGAGC
TGCTCGTCGCTGACAAGAACATACAATTCCACCAGACATTCTCGTCCAAGAGCGGTCAATGGAGCGCCGTCCACCAGGTC
T
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----SS--------------------S-
--------------------------------S------------------S----------------------------
-----------------------------------------------------------------------S--------
--S----S---SS--------------------------S-----------------SS------S--------------
-------S-------S------------------------------------------------S---------------
-----------S--S-----------------------S------------------SSS--------------------
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-------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S------
-------------------------------------------------------S------------------------
-----------------------------S------------S-----------------------------------S-
-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------
------------S------------------------------SSSSSS--------------------S----S--S--
-----------------------------SSSSS------S------S--------------------------------
-S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---S-------S-------------S--------------
--------------------------------------------------------S--------------------S--
--------------------------------------------------------------S-----------------
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-----------------------------S-------------------------S------------------------
----------------------SS--------------------------------------------------------
-------------------------------S-------------------------------------------S----
-----------------------------------------------------------------S--S-----------
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>forward_842
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----------------------CGCCGTTTCTTTGTTGCAGA--------------------------------------
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>reverse_1873
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--------------------------------GTGCACAGCTCCACAATGTC----------------------------
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