>input_sequence_81980
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-------------------------------------------------------------------------------A
GCCACACCA----CACGCACGAG-------------ATATCTGAAGTAGTAATAAGTAGAAACACAGAGATGAGCTATCT
AAAGACATCCTGGCCGGAATTGGTGGGCGAGCCGGCGACACCGGCAGTGATGACGATTAACAGCCAAAGGCCCGACTTGA
CGACGGAGGTCCTTCCGGTTGGGACCAGCCCAAGCCCACCAGGGTTCGACTCGACGCGTGTCTGCGTCTTCCTTGACCCA
AGAGACAAACTTGGCCGTGTTGCAGCCGTCCCTGTCGTTGGCTAGCTTA--------GTGTTTCTTGAGGAGTCAATTGC
CGAAAACTACCACATTTGCGGCTAGCTTTGCAGAAAAC----------------------CATCAAGTCGCTAATTCGTT
GTAAAAATACACCATATTGATAGTAAA-----------------------------------------------------
--------------------------------------------------------------------------------
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----------------
>chr1A_1_TraesCS1A01G022300
TTTTTTGATTTTTTTCTGATCGGATGGAGATGAGTGTGGGGACCGAATCGCTGCACTCGTTGATGCAGGCTTTCTATTAT
AGTATTAGCTAATAAAGAAATGCGAAGAACACTTTCATTGTTGAATCGACAAATTAATTTTTTTGACAGAGGGTGGATTT
TATTACTCAAAATGCAGCATCAAGAGAATATAACCACGATGAGCACACCCCTGGCCTCTGTATAACTATGATGCACACGG
CCAACACCAACGCACACACAAAAAAACACCGGCAGATAGCAAAGTCATATAAGACCAAAGCTACGCCTAAGCGTTGAAAA
AAAAACGGATGCTATCAAATACATGATCGACAAACCTACAACAATGACCATATCCGCACCAACCATCTCATGACACCACA
AGAATAATGATATTCTTCAATAGTAATGCCTTCATGAAGGGAGCGACACTTGAGCGCCGCCGTCATTGAAACCTACCATC
AAAGGTCAGAATCTAGGTTTTCACTATGAAAAAACAGTCTGAACATATCCGAGCAATGCCTTCAACAAGGTAACGACATA
AAGTGTATGTGTTTCAACTGTATGGTGTACGGCTTAAAGCGTATGTAGCTGCGTTTGCATGTTATGCAGTGTAACTCACA
AGGCAAATTTCTCAATCCTATCATTAGAAAGACATCGAGAAGGAAAACAATCCAACGTTGCTCACTAGCTGAATTTGTA-
----------------------------CCAATTAGGCCTGAATGTTCCTTAACCATCTTTT-TTATTTACAAAGTGATC
TATTTTTCGGCATAAGTGTCTCCTGAATAATATAGTAATTCATGCCTCGACTAAACAGCCCGGCTGATTTGTGAGCAAAC
GATCTATCCAGAAGTGCAGTGATAACATCGAAGCATCACCTAGTCATGCCGGCCAGCTTTGTATGGATGCTAA-GTAAGA
TTTTTTTT----TTCCCGAGAATGCTAGATTAA----GACACCTAGCCTATAAATCCTTGCGATATCAGAGACCTTTGCA
GCCACACCA----CACGCACGAG-------------ATATCTGAAGTAGTAATAAGTAGAAACACAGAGATGAGCTATCT
AAAGACATCCTGGCCGGAATTGGTGGGCGAGCCGGCGACACCGGCAGTGATGACGATTAACAGCCAAAGGCCCGACTTGA
CGACGGAGGTCCTTCCGGTTGGGACCAGCCCAAGCCCACCAGGGTTCGACTCGACGCGTGTCTGCGTCTTCCTTGACCCA
AGAGACAAACTTGGCCGTGTTGCAGCCGTCCCTGTCGTTGGCTAGCTTA--------GTGTTTCTTGAGGAGTCAATTGC
CGAAAACTACCACATTTGCGGCTAGCTTTGCAGAAAAC----------------------CATCAAGTCGCTAATTCGTT
GTAAAAATACACCATATTGATAGTAAACTTGTTGCAAAAAGCACTGATCGCTCACTTTTCTTCATTTAATCGCGTTTCCG
ACAAGTGGGGCCCGCTCGTCGGGAGCTGACTTGGCAAAAATCACCA-------CATGTGTGCGTTGACTGAGTCTTCTTC
CCTCTCCTCTCTTCCCCTTCTATCACACATTTT-----------------------------------------------
-----------------------------------------------------------------------------ATC
AAACATGTTGACGGCATCTCCCGTCATCGCCATGGCCATCGCAGCTGGCCCTAATGCGCTGCCCCTGCAAGCTGTGCACC
TCTGGTACGCCGCGGCCGCCGGAGAGATGCCCGTGGAGATCACCCTAAAGGAGGAGGA---CACCAAGCTCGACTTCACC
ATCAGCCGCACCGAGGAGGAGCACCAGGCCCGGGGGAAGAGGATCCTCTACGGTTTGGCAGCCTTCCATTCTACCACTGA
CATGTGAGCCTGTGGGAAACCTAGCCCACATGTCAGCGGCCCAACGTCACCTACTGCACGGCAGAGGAGCCGTGTCCGGC
CCAGGGCGTGCACGTCCCCACTGCGTACCTGCTGCTCCGCAGCCGGCAAGCTTGTTGAGGGCGGGGAGGTGCTGCTCCTC
CTCCTCGTCGTCAAGCAGAAGAATG--------------GTTGCCGTGCATTGTCTTCGCTGGCGCTCGATGGCGGCGGT
GGCGGCCCGTTGCCTC--------------------------CTTGACCGAGGCGGTCCTCCCCCAGCACGAATCGCACG
ACGGCCGCGCCG--------------CCCGGTGCGAGGCGGTCGAGCGCTGGCGAGGCCAGCCTGTCCGCATCCACGCCG
GCCACCGAGAGGTATGTCGCCGCGAGGACGAGGGTCATGGGATGTTGCACGCCGAGGCGGAGCTATGCGACGAGGTCCTT
GTTCCT-GCTCAAAGCGCGGCGGACTGCAGCAACGGGCGGGGGACCCCTGATGCCTCCCTTCGTGAGCTGCGGCAGGAAC
TCGGGATTAGCTCCATGGGTGGTGAGGGGCGGAGGGGAGCTCGCCGGCGCGGCGTATTGGGGCTAGCTGCGACGGCCGCC
ATGGCGCTGGCGGGAT
>chr1B_567
--------------------------------------------------------------------------------
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------ATGCGTTTCAGCTGTATGGTGTACGGCTTAGAGCGTATGTAGCTGGGTTTGCATGTTATGCAGTGTAACTTG--
------------------------------------GAGAAGGAAAACAATCCAAATTTGCCCATTAGCTGAACATGCCA
ACTTATCGTCAAAGACAAAAGCCAAATGCCAATTAGGCCTGAATGTGCCTTAACCATCTTTT-TA-TTTAAAAAGTGATC
TATTTTTCGGTATAAGTGTCTCCTGAATAATATAGTAATTCATGCCTCGACTAAACAGCCCGGCTGATTTGTGAACAAAC
GATCTATCCAGAAGTGCAGTGATAACATCGAGGCATCACCCAGTCATGCCGGCCGGCTTTGTATGCATGCTAA-TTAAGA
TTTTTTTT----TTG-CGGGAATGCTAAATTAAGCTTGACACCTAGTCTATAAATCCTTGCGATATCAGAGACCTTTGCA
GACACACCA----CACCCACGAGGGCCCTAGCACATATATCTGAAGTAGTAATAAGTAGTAACACACATATGAGCTCTCC
GAAGACATCCTGGCCGGAGTTGGTGGGCGAGCCGGCGACACCGGCAGTGATGACGATTAACAGCCAAAGGCCCGACTTGA
CGACGGAGGTGCTCCCGATTGGGACGAGCCCAAGCCCGCCGGGATTCGACTCAACGCGTGTCTGCGTCTTCCTCGACCCA
CGAGACAAGCTTGGCCGTGTTGCAGCTGTTCCAGTCGTTGGCTAGCTTA--------GAGTTTCTT--------------
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>chr1D_592
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-------------------------------GCTTAAAGCGTATGTAGCTGGGTTTGCATGTTATGCAGTGTAACTCACA
AGGCAAATTCCTCAATCCTATCGTTAGAAAGACATCGAGAACGAAAACAATCCAACTTGGCTCACTAGCTGAATTTGCCA
ACTTCTCCTCAAAGACAAAAGCCAAATGCCAATTAGGCCTGAATGTGCCTTAACCATCTTTT-TAATTTACAAAGTGATC
TATTTTTTGGCATAAGTGTCTCCTGAATAATATAGTAATTCATGCCTCGACTAAACAGCCCGGCTGATTTGTGAGCAAAC
GATCTATCCAGAAGTGCAGTGATAACATCGAAGCATCACCCGGTCATGCCGGCCGGCTTTGTATGCATGCTAA-TTAAGA
TTTTTTTT----TCCA--GGAATGCTAAATTAAGCTTAACACCTAGCCTATAAATCCTTGCGATATCAGAGACCTTTGCC
ACACCTAG---------------------------------------------------------------------TCT
AAAGACATCCTGGCCGGAGTTGGTGGGCGAGCCGGCGACACCGGCAGTGATGACGATTAACAGCCAAAGGCCCGACTTGA
CGACGGAGGTGCTCCCGACTGGGACCAGCCCAAGCCCGCCGGGGTTTGACTCCACGCGTGTCTGCGTCTTCCTTGACCCA
CGAGACAAGCTTGGCCGTGTTGCAGCCGTCCCCGTCGTTGGCTAGCTCA--------GTGTTTCTTGAG-----------
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>chr1B_729
CCTAA---------------------------------------------------------------------------
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-------------------------------------------TGTGCCTTAGCCATCTTTTTTTATTCACAAAATGATC
TAGTTTTCGGCATAAGGTTCTCCCGAATAACATAGTAATTCATGCCTCTACTAAACAGCCCGGCTATTTTGTGAGCAAAC
GATCTATCCAGAAATGCAGTGATAACATCGAAGCATCACCGGGTCATGCCGGCCGGCTTTGTATGCATGCTAAATTAAGA
TTTTTTTTATTGTTG-CGGGAATGCTAAATAAAGTTTGACACCTAGCCTATAAATACTTGCGATATCAGAGACCTTTGCA
GCTACACCA----CACCCGAGAG--CCCTCGCACATATTTCTGAAGTAG----------TAACACACAGATGAGCTCTCC
GAAGACATCCTGGCCGGAGTTGGTGGGCGAGCCGGCGACACCGGCAGTGATGACGATTAACAGCCAAAGGCCCGACTTGA
CGACGGAGGTGCTCCCGATTCGGACCAGCCCAAGCCCACCGGGGTTCGACTCGACACATGTCTGCGTCTTCCTCGACCCA
CGAGAGAAGCTTGGCCGTGTTGCATCCGTCCCCGTCGTTGGCTAGCTCA--------GTGTTTCTTGAG-----------
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>chr1B_729
CCTAA---------------------------------------------------------------------------
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-------------------------------------------TGTGCCGTAACCATCTTTTCTTATTCAAAAAATGATC
TATTTTTCGGCATAAGGTTCTCCTGAATAAGATAGTAATTCATGCCTCTACTAAACAGCCCGGCTATTTTGTGAGCAAAC
GATCTATCAAGAAATGCAGTGATAACATCGAAGCATCACCGGGTCATGCCGGCCGGCTTTGCATGCATGCTAAATGAATC
TC---TTT-TTGCTG-CCGGAATGCTAAATAATGCTTGACACCTGGCCTATAAATACTTGCGATATCAGAGACTTTTGCA
GCCACACCA----CACCCGAGAG--CCCTCGCACACATTTCTGAAGTAGTA---AGTAGTAACACACAAATGAGCTCTCG
GAAGACATCCTGGCCGGAGTTGGTTGGCAAGCCGGCGACACCAGCAGTGATGACGATTAACAGCCAAAGGCCCGACTTGA
CGACGGAGGTGCTCCCAATTGGGACCAGCCCAAGCCCGCCGGGGTTCGACTCGACGCGTGTCTGCGTCTTCCTCGACCCA
CGAGACAAGATTGGCCGTGTTGCAGCCGTCCCCGTCATTGGCTAGCTCA--------GTGTTTCTTGAG-----------
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>chr1B_729
CCTAA---------------------------------------------------------------------------
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-------------------------------------------TGCGCCTTAGCCATCTTTTTTCATTCACAAAATGATC
TATTTTTCGGCATAAGGTTCTCCCAAATAAGATAATAATTCATGCATCTACTAAACAGCCCGGCTATTTTGTGAGCAAAC
GATCTATCCAAAAATGCAGTGATAACATCGAAGCATCACCGGGTCATGCCGGCCGGCTTTGTATGCATGCTAAATTAAGC
TTTTTTTT-TTGTTG-CGGGAATGCTAAATAATGCTTGACACCTGGTCTATAAATACTTGCGATATCAGAGACTTTTGCA
GCCACACCA----CACCCGAGAG--CCCTCGCACACATTTCTGAAGTAGTA---AGTAGTAACACACAAATGAGCTCTCG
GAAGACATCCTGGCCGGAGTTGGTGGGCGAGCCGGCGACACCTGCAGTGATGACGATTAACAGCCAAAGGCCCGACTTGA
CGACGGAGGTGCTCCCGATTGGGTCCAGCCCAAGCCCGCCTGGGTTCGACTCGACACGTGTCTGTGTCTTCCTCGACCCA
CGAGACAAGCTTGGCCGTGTTGCAGCCGTCCCCGTCGTTGGCTAGCTCA--------GTGTTTCTT--------------
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>chr1D_729
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-------------------------------------CCTTAATGTGCCTTAGCCATCTTTTCTTATTCACAAAATGATC
TCTCTTTTGGCATAAGATTCTCCCGAATAACATAGTGATTCATGCCTAGGGTGAACAGCCCGGCTGTTTTGTGAGCAAAC
GATCTATCCAGAAGTGCAGTGATAACATCGAAGCATCACTTGGTCCTACCGGCCGGCTTTGTATACATGCTAAAATCAGC
A-----------------------------------TGACACCAAGCCTATAAATCCTTGCGATATCAGAGAGCTTTGCA
GCCATACCCCACGCACACAATAG--ACCTCCCACATATATCTGAAGTAGTAATAAGTAGTAAGACGCAGATGACCTCTCA
GAAGACATCATGGCCGGAGTTGGTGTACATGCCGGCGACGCCGGCAGTGATGACCATCAACAGCGAGAGACCTGACTTGA
CGACGGAGGTGCTCCAGATTGGGATCAGCCCAAGCCCGCCGGAGTTCGACTCGACACGTGTCTGCGTCTTCCTCGACCCA
CGAGACAAGCTTGGCCTTGTTGCAGCCGTCCCCGTCGTTGGCTAGATCCAACGGAGCGTTTCTCTTAAGCAATACATAGC
AGAGTTGAAACAAACGGGGCCGGTTGGCGATATGCCCCGGCAGGGATCATATATGTAGCTCATCGTGTCGTTCTTACA--
------------------------------------------------------------------TTATGGTTTTTCTA
ATAAATGGTCCGCTAAATAAGTGGTAGGGCAAGTATTAGCGGAAGAGAATTTCCGTGTGACCTTTGAACGATAGTTCCTC
CCCAACAGTGCTCCTGTGTGCACTCTCGCTTTTGGCGCTGCCACGTAAATATAGTGCAGGCGTCGGCCGCACGTTCGCCG
TGTGTATGTCCGCGCTTCTGAGTCAAAACCAGCCGACTCAGTTGCTGGGTGAAGAATGTTGCATAGCCTACGTGAAAATC
AAAGAGGAGAGCTCAGCCTATAAATCCATTGCAATACGAGAGACGTGTGCAACCACACCGCAAGGTATA-----------
---------------------------------------------------------------------TCTGCAGCAGT
AGTAGGAACACACAAGATGAGCTCTGGAAGAC------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------GTCTTTGCCGGAGTTG-GTGGGCATGCC
GGCGACGCTGGCGGTGATGACCATCAACAGCCAGAAGCCAGACTTGATGGCCGAGGTGCTCCAGATTGGGATCAGTCCAA
----------GCCCGCCCAGCTTCGACTCGACACGTGTCTGTGTGTTCCT----------------------------CG
ACCAACGAGACAAGCTTAGCCTTGTTGCAGCCGTCCCTGTCGTTGGCTAGCT----------------------------
--------------------------------------------------------------------------------
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----------------
>chr3A_1284
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-------------------------------------------------------------------AGGAGTCAATTGC
AGAAAACTACCATGTTTGCGACTAGCTTTGCAGAAAAC----------------------CATCAAGTCGTTCATTTGTT
GCAAAAA-ACACTACATTAGCAGTGAATTTGTTGCAAAAAGCACTGATCGCTCACTTTGCTTCAGTTAATCGCGTTTCCG
ACAATGA-GGCCCGCTTGTCGGGAGCTGACTTGGCAAAAATCACCA-------CGTGTGCGCGTTGACTGAGTCTTCTTC
CCTCTCCTCTCTTCCCCTTCTATCACACATTTT-----------------------------------------------
-----------------------------------------------------------------------------ATC
AAAGATGTTGAGGGCATCTCCCGTCATCGCCATGGCCGTCGCAGCTGGCTCTAATGCGCTGCCCTGGTAAACTGTGCGCC
TCTGGTACACCGCGGCCGCCGGAGAGATGCACGTGGAGATCACCCTGGAGGAGGAGGA---CACCAAGCTCGGCTTCGCC
ATTAGCCGCACCGAGGAGGAGCACCAGGC---------------------------------------------------
--------------------------------------------------------------------------------
CCAGGGCGTGCACGTCCCCACTGCGTACCTGCTGCTCCGCGGCCGGCAAGCTTGTTGAGGGCGGGGAGGTGCTGCTCCCC
CTCCTCGTTGTCAAGCAGAAGAATG--------------GTCGCCGTGCATTGTCTTCGCTGGCGCTCGATGGCAGCGGC
GGCGGCCCGTTGCCTC--------------------------CTTGAGCGAGGCGGTCCTCCCCCAGCACGAATCGCATG
ACGGCCGCGCCG--------------CACG------------------------------GCCTGCCCGCATCCACGCCG
GCCACCGAGAGGTCCGTCGCCGCGAGAACGAGGGTCACGGGATGCTGCACGCTGAGGCGGAGCTGTGCGACAAGGTCCTT
ATTCCCGGCTCAAAGCGCGGCGGACTGCAGCAACGGGCGGGGGACCCCTGATGCCTCCCTTCGCGAGCTGCGGCAGGAGC
TCGGGATTAGCTCCATGGGCGGTGAGGGGCGGAGGGGATCTCGCCGGGGCGGCGTATTGGGGCTAGCCGTGACGGCTGCC
ATGGCGCTGGCGGGAT
>chr6B_1285
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--------------------------------------------------------------------GGAGTCAATTGC
AAAAAACTACCACATTTGCGGCTAGATTTGCAGATAAC----------------------CACCAAGTCACTAATCCGCT
GCAAAAA-ACACCACATTAGCAGTAAACTTGTTGCAAAAAGCACTGATAGCTCACTTTGCTTCATTTAATCGTGTTTCCG
ACAAGTGGTGCCC----------AGCTGACTTGGCAAAAATCGCCA-------CGTGTGCGCGTTGACTGAGTCTTCTTC
CATCTCCTATCTTCCCCTTCTATCACACATTTT-----------------------------------------------
-----------------------------------------------------------------------------ATC
GAACATGTTGCTGGCATCTCCCGTCATCGCCATGGTCGTCGCAGCAGGCCCTAATGCGCTGCCCCGGCAAGCTGTGTGCT
TCTGGTACACCGCGGCCGCCGGAGAGATGCCCGTGGAGATCACCCTG---GAGGAGGA---CACCAAGCTCGGCTTCGCC
ATCAGCCGCACCGAGGAGGAGCACCAGGC---------------------------------------------------
--------------------------------------------------------------------------------
CCAGGGCGTGCACGTCCCCACTGCATACCTGCTGCTCCGCGGCCGGCAAGCTTATTGAGGGCGGGGAGGTGCTGCTCCTC
CTCCTCGTCGTTAAGCAGAAGAATGGTCACTGGGAGGACGTCGCCGTGCATTGTCTTCGCTGGCGCTC-ATGGCAGCGGC
GGCGTCCCATTGCCTC--------------------------CTTGAGCGAGGCGGTCCTCCCCCAGCACGAATCGCACG
ACGGCGCGCCGCCCGGCCTGCCGTCACCCGGCGCGAGGCGGTCGAGCGTCGGCGAGTCCAACCTGTCCGCATCCACGCCA
GCCAGCGAGAGGTCCATCGCCGCGAGAACGAGGGTCACGGGATGCTGCACGCCGAGGCGGAGCTGTGCGACGAGGTCCTT
GTTCCCGCTAAAAT-CGCGGCCGACTGCAGCAACGGGCGGGGGACCCCTGATGCCTCCCTTCGCGAGCTACGGCAGGAGC
TCGGGATTAGCTCCATGGGCGGTGAGGGGCGGAGGGGAGCTCGCCGGGGCGGCCTATTGGGGCTAGCCGCGACGGCCGCC
ATGGCGCTGGCGGGAT
>chr4B_1286
--------------------------------------------------------------------------------
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---------------------------------------------------------------------GAGTCAATTGC
AGAAAACTACCACATTTGCGGCTAGATTTGCAGAAAAC----------------------CACCAAATCGCAAATCCGTT
GCAAAAA-ACACCACATTAGCAGTAAACTTGTTGCAAAAAGCACTGATCGCTCACTTTGCTTCATTTAATCGTGTTTCCG
ACAAGTGGTGCCTGCTCGGTGGGAGCTGACTTGGCAAAAATCGCCA-------CATGTGCGCGTTGACTGAGTCTTCTTC
CATCTCCTATCTTCCCCTTCTATCAGACATTTT-----------------------------------------------
-----------------------------------------------------------------------------ATC
GAACATGTTGCTGGCATCTCCCGTCATCGCCATGGCCATCGCAGCAGGCCCTAATGCGTCGCCCCGGCAAGTT-------
-----------------------GAGATGCCCGTGGAGATCACCCTG---GAGGAGGAGGACAACAAGCTCGGCTTCACC
ATCAGCCACACCGAGGAGGAGCACCAGGC---------------------------------------------------
--------------------------------------------------------------------------------
CCAGGGCGTGCACGTCCCGACTGCGTACCTGCTGCTCTGCCACCGGCAAGCTTGTTGAAGGCGGGGAGGTGCTGCTCCTC
CTCCTCGTCGTTAAGCAGAATAATGGTCGCTGGGAGGACGTCGCCGTGCATTGTCTTCGCTGGTGCTCGATGGCAGCGGC
GGCGTCCCGTTTCCTC--------------------------CTTGAGCGAGGCGGTCCTCCC-----------------
--------------------------------------------------------------------------------
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----------------
>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS---S------S----------------------------------S----------------------------
---------S------------S---------------------------------S--------------------SS-
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S----------S--------S-----
---------------S--S--------S----------------------------------------------------
----------------S------------------------------------------S------S---------S---
------------------S-------------------------------------------------------------
----------S--S---S----------------------S---------------------------------------
S-------S-----------------------S-----------------------------------------------
S-------------------------------------------------------------------------------
-S-----S------S---SSS-------------------------------------S---------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------S-------------------------------------SS------------------------S-------
-----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
----------------------------------------S---------------------------------------
-----------------------------------------S--------------------------------S----S
-----------------------------------------------S--------------------------------
-------------------------------S------------------------S-----------------------
-------------SS-----------------------------S-------------------S---------------
-----S---------------------------------------------------------S--------------S-
-------------------S---------------------------S-------------------S------------
----------------
>forward_243
--------------------------------------------------------------------------------
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---------------------------------------------------------------AACTATGATGCACACGG
CCA-----------------------------------------------------------------------------
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>reverse_2018
--------------------------------------------------------------------------------
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-----------------AACCTAGCCCACATGTCAGC-------------------------------------------
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----------------
