>input_sequence_81946
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------------------------------------------------------------ATGGTGGACAAGGGGGCGGC
GAGGAGGGCCATGCAGTTCCGCATGCCGCGGCGCCGGAGGGCGGACGCGGCGTCGGCAGCGGCAGCGGCGAGCGGG---G
GCGGCGGGCGGAGGAAGAGGGTGGCGGTGGCGAGGCTGGGCGGCGATGGAGGCGGCCGCGGCGGG---TCGGCTGAGCGG
AGAAGGCTCTTCGGGGCGCTGCGGCGGGTGCGGGTGCGGTGGCTGGCGGCGCTGTACAGGCGGACGCTGCGGCGGCTGCG
CGCCAGCTACGCCAGGGCCCTCCGCGAGCTCGTCGAGGGCAGGGCGCTCCTGGGCGCCCTCAACGCGCCCGCCGGCGTCG
AGTGCTCCCGCGCCGCGTCGTTCGGGCCGATGGCCACCGTCGGGTTCTGA------------------------------
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>chr7A_1_TraesCS7A01G162300
GCAAAATACTTTTCAACATATTATCTTGTTTTAAAATTGTATTCGGAGTTATTTGACTTTTTATAAGTCTTAGCTCTGTT
CTTTTTTCCAGGAAAGTCTTAGTGATATTCTACGAGGGAGTTTTTCTGCTAGCATTATTTGCATGGCCGATTCCACCCTA
GCTGTCCTTCCCAGACCTACATCTTTTCTAATCAATTTTGTCAACTCCATC--TAGCTCTTAATTTGAAGCGATCACAAT
GAACTCCATTTAGCTCTTAATCTGGGTCTGGGCAATTTCAATGGCTCG--ACAGGCTCCAGCAGCCCATGGAAATGGGTT
CAATCAGCAGCCTCCATACATTTGTTAACAAA-TGAACAGGTCATCTCGTCAAGTCAATGACGGTCAGTTCGCCCGCCC-
-ATGATTAAGCTAGCTCGGAATCTTAGTTTAGCTCAGGCTGTCGCTCGTACATAACCAAGATTTGTTTACCCTGACGCAT
TGTCGAGCTTATCTTGCAGTTGCAGCAAGCCAGAGGCGAGC-------TCGGAATAGCATATTCAC----AAGTTCCTCA
GCACTTTTGTCTCGCAGTACCATGA--ACACACACGCACACGTATGAGTCAGTGGCTTGCTATATTGGCGCATCCTGATT
ATGGGGGCGTTTGTGCTTTGTACTTAGCATCCTGCTCTGTTGATTATTGGTGACTGTGTGGTGGCCAAGGCCAACTGACT
AAACCACCTGCTCGAACGTTGATGGATGGACGTCACAGCGGTCAATGCCGGCCCTTGAGCGCTCCGTGGGACGCACTACC
CCTCCACCAAAAGAAAAGACGCCATCTAAAGCTGTGTAGGCCATAGATTTCGTTATCTTAGTACAAAAATTCAACTGCCG
CACGCAGATGACGGCAGAGCACTACGGCTTGCGCCTCACTTATATAGCTTCTTCACGTAGCATAGCAAGAAACATGAACA
AACGAGAGGGAGGGAGCGAGCTGATCTCCAACCCTGAGCATACATTTTGATTTGATCGACATGGTGGACAAGGGGGCGGC
GAGGAGGGCCATGCAGTTCCGCATGCCGCGGCGCCGGAGGGCGGACGCGGCGTCGGCAGCGGCAGCGGCGAGCGGG---G
GCGGCGGGCGGAGGAAGAGGGTGGCGGTGGCGAGGCTGGGCGGCGATGGAGGCGGCCGCGGCGGG---TCGGCTGAGCGG
AGAAGGCTCTTCGGGGCGCTGCGGCGGGTGCGGGTGCGGTGGCTGGCGGCGCTGTACAGGCGGACGCTGCGGCGGCTGCG
CGCCAGCTACGCCAGGGCCCTCCGCGAGCTCGTCGAGGGCAGGGCGCTCCTGGGCGCCCTCAACGCGCCCGCCGGCGTCG
AGTGCTCCCGCGCCGCGTCGTTCGGGCCGATGGCCACCGTCGGGTTCTGAAATTCCGACCGACCTGACGGTGGGTGGGTC
GGCCGTGAAAGGGTTTACTTATTATCGTGTTGGCATTATGAGGCAGAGGCACCACCTTCGGTCTTTGTACATACTACTTC
CTTCGTCCCAAAATAAGCGTCTTAACTTTATAACTATATTAGCTTTAGTACAAATTTATATTAAGCTTAAAACACTTATT
GTGGGATGGAGGGAGTACTACGAAGGTGTGCTTCGCGCGTAACAAGGCCGCAAACATTTTTGCTCTTTTATAGTGTGTGT
TGGTGATTTGTAGTTCTGCCTTTGCTTGGATCTCCATCCATGTATGTAAAAATCCGACTCTACTCAATAAATTCTAGTGA
GTATTACAATCCATGCGACACAACTATTCTCATTGCATGC-AAACTTTTTTCCGTAACAATATCAGG-GAACGTTTGCTG
CGAGTGAGATCCCAACAAACGCCCCAACCCCAAAGCCACATGGTCCAAATCCAAAGGATGGCTCTTATTGATGAAAATTG
CACTAAAAAT--AAAAAAATTCATGCTTTTTCCTGAAAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTTCGCCAATGCGTGG
CAACGAACGTTCGCCGGGGATTAGCGTC--TTTTTTTTTACATAGGCATGTAACCGCTACAAGTGTTCAGGCTTGTGCTA
ACACGAGTAATGCAAAATTCTCTTTCAGCATTGAGATGCAAAATCTTACTCCATTTTTGTTGCCTATCATCTTTACCAAT
ACAAGGCAATCTGATT
>chr7B_113
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--------------------------------CGAGGGAGCTTATCTGCTAGCATTATTTGCATGGCCGATTCCACCCTA
GCTGTTCTTCCTAGAACAACATTTTTTGTAATGAATTTTGTCGACTCCATTTTTAACTCATAATTTGAAGCGATCACAAT
GAACTCCACCAGTCCTT---TCTGGATCTGTGCAATTTCCATAGCTCGACACAGGCTCCAGCAGCCCATGGAG-TGGGCT
CAATCAGGGGCTTGCGCACATTTTTAACAAAAATGAACAGGTCATCTAGTCAAGTCAATGACGATCAGTTCGCCCGCCCA
TATGATTAAGCTAGCTCGGAATCTTCGTTTAGCTCAGGCGGTCGGTCGTACATAACCAAGATTTGTTTACCCTGACGCAT
TGTCGAGCTTATCTCGCAGCAAGCAGCTTAGCAGGCGATCGAGCTCGATCGGAATAGCTTAATCGTAATTAAGTTCCTCA
GCACTTTGGTCTCGCAGTACCATGAACACACACACGCACACGTATGAGTCAGTGGCTTGCTAGATTGGCGCATCCTGATT
ATGGGGGCGTTTGTACTTTG----TAGCATCCTGCTCTGTTGATTATTGGTG-----------------GCCAACTGACT
AAACCACCTGCTCGAACGTTGATGGATGGGCGTCACAGCGGTCAATGCCGGCCCTTGAGTGCTCCGTGGGACGCACTACC
CTTCAGGAAAAAGAGAAGACGCCATCTAAAGCTGTATAGGCCATAGATTTTGTTATCTTTGTAGAAAACTTCAACTGCCG
CACGCAGATGACGGCAGAGCACTATGGCTTGCGCCTCACTTATATAGCTTCTTCACGTAGCATAGCAAGAAACAGGAGCA
AAGAA----GAGAGAGCGAGCTGATCTCTAACCCTGAGCATACATTTTGATTTGATCGACATGGTGGACGCGGGGGCGGC
GAGGAGGGCCATGCAGTTCCGCATGCCGCGGCGCCGGAGGGCGGACGCGGCGTCGGCGT------CGGCCAGCGGGATCG
GCGGCGGGCGGAGGAAGAGGATGGCGATGGCGAGGCTGGGCGGCGATGGAGGCGGCCGCGGCGGCGGATCGGCTGAGAGG
AGGAGGTTCTTCGGCGCGCTGCGCCGGGTGCGGGTGCGGTGGCTGGCGGCGCTGTACCGGCGGACGCTGCGGCGGCTGCG
CGCGAGCTACGCCAGGGCCCTCCGCGAGCTCGTCGAGGGTAGGGCGCTCCTGGGCGCCCTCAACGCGCCCGCCGGCGTCG
AGTGCTCCCGCGCCGCGTCGTTCGGGCCGATGGCCACGGTCGGCTTCTGAGTTCTCGTCGACCTTGTTGGTGTATGT---
-----------------------------------------------GGCACCACCTTTGGTCTTTGTACATAC------
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---------------------GAAGGTGTGCTTCGCGCGCGGAAAGCCGCAAAACATATTTCTAGTGTGTT--------T
TGGTGATTTTTAGTTCTGTATTTGCTTGGATCTCCATTCATGTATGTAAAAATCCGGCTCTACTCAATAAATTCTA---A
GTATTACGATCCGTGCGACACAACTATTCTCATTACATGCAAACCTTCTTTTCGTTACGATACCTGGCGAACGTTCGTTG
CGAGTGAGATCCCAACGAACGCCCCAACCCCAGAGCCACACGGTCCAGATCCAAAGGATGACAGTTATTGATGAAAATGG
CAATAAAAATAGAAAAAACTTCATGCTTTTTCTGAAAACTGCCACCACCCCTAACACTGAAAATGCCGTCCCGCGCATTC
ACA-----------------------------------------------------------------------------
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-----------------------------------------------------------------------AATGCGTGG
CAGCGAACGTTCGTTCGGGATTAGTGTCCTTTTTTTTTTACATAGCCATGTAACCGCTACAAGTGTTCAGGCTTGTACTA
ACAC-AGTAATACAAAATTCTCTTTCA-----------------------------------------------------
----------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S--S------------------------------------
-----S-----S---S-S----S----S----S---------S-------S----S---S--------------------
--------SSSSS-SS-SSS-----S----S--------S--S-----------------------------SS----S-
-------SS--S-S-SS------S-S-SS------------------S---------------S----------------
-------------------------S-------------S----S-----------------------------------
--------------S----SSSSSSSSSSSSSSS-SSSSSS-----------------S--S--SS--------------
-------S------------------------------------------------------S-----------------
--------------S-----SSSS----------------------------SSSSSSSSSSSSSSSSS-----------
-----------------------------S-----------------------------S--------------------
-S--SSSS------S--------------------S--------------S--------S---S----S-----------
------------------------S-------------------------------------------------S--S--
--SS-SSSS---S---------------S----------------------------------------SS---------
---------------------------------------------------------SSSSSSSS----S----------
--------------------S-----S-------------------------------------S------------S--
--S---S-------S--------S---------------------------------S----------------------
---S-----------------------------------S----------------------------------------
-------------------------------------S-----S------SS-SS--S-SSS-S--SS----SS--SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S---------------SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS------------------SSSS---S-SSS------S---SSSS-S-SS-SSSSSSSS-
---------S--------SS-----------------S------------------S-------------------SSS-
-------S----S---------------------S--------S---S---S---S--S---S-S----------S-S--
----------------S---------------S-------S------S------------S-SS--------------S-
--S---------------S-------------SSS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
--S----------SSS--------S--------------------S------------------------------S---
----S------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS
>forward_166
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------------------------------------------------------------------CCGATTCCACCCTA
GCTGTC--------------------------------------------------------------------------
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>reverse_1471
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------------------------------TGGCATTATGAGGCAGAGGC------------------------------
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