>input_sequence_81871
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-------------------------------------------------------------------ATGGCGGCGGCCA
TGGAGCAGAGCAACGGG---GGCGGCGGCGTGAAGGTCAAGTTCATCGAGACGCAGTTCGTCAGCTCCGACGCCGCTAAC
TTCAAGTCCGTCGTGCAGCGGCTCACCGGCAAGTACTCCAAGATGCCGCCGCCGGCGT---CCTCGGTGCACAGGCCTCG
CCCGAGGCCGTGCGGCAGAGCCGACCAACAAGGGCGGCCGTGCGCCTCCGGCACCGACCAGCTGACGACGGCTGCGCCGG
CGAGGCCAACGGTGGTGGCCTTCGAGCCGCTGCACGTGGAACCGGAGCTGAACGAGCTCTGCGACTTCGCCGACCTGCTC
TACGCGACCCCGAGCGCGCGGCGCCACGGCGGCAGCATCGTCAACGGCTTTCCTTACTGA--------------------
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>chr7D_1_TraesCS7D01G329300
AATCAATCAGCACCATTTGATCCAACATTTCTTCCTCCTCAAGTCGTCCGATCCTCCCCCTAAACCCCGCTCCAACTTCG
GCCCCCGCCATCCATGGCCGGCAGCTATCGTGCATGGCTTGCCGCCGTGCACTCCCTTGAACCGCCCTTACCGCCGTGCT
ATTGCCTTTCGTTGGCCCCGACCTCCATGCAACACCCCCTTGCAAACCTCCGACCCCCGTCCATCTAGAACACCAGCACC
AGGTTATTTGTGTCCGAGGCCTCCCTGGCGATCGCCGCTTCGCCCACGACTCCGCCTTGGGGATGTGCTTTCTTTTCTCC
CCCTATTCGACTGATGCGGCAAAAAATTCCAGGAGCTTGCTCAATAGCATGGCGAAAACATAAATATTCTGAGACCTGGT
ATTAGTTACACCCGAATTTCCGG--AAATTTCGGTGAAAATGGGATGCCTGATTGAGAAGGCACGATATGGACGTTGGTA
AATTTTCCACGGTCAATTCAACACCTCGACCGATCTACAAGTTCCACAGCCGTCACTGTCTAGCTATTATGCCCCGTAAT
TTTCACAGAAACAGAAAATTT-GGCACCACAAGCGGTAAAGAAGATCTCCAGGAGGCGAGAAGATGCCGCTGTCTAATCC
GCACGAGCCCTTGACCGCCTGGTCCGCCCCCGATCTCTGACCGCTCCTCCGGGCTGGCTCGTATCTTTGACTGGACCAAT
CATCTCCCT--------------CCTCTTCCGTCCCTGACAGGTGGGCCCGCCCCACGTGTGCCCCACCTGTCATGGGGC
CAACGTTGCGGGGGAATCCGTGGCTATAGAGTTTGGCTGAGCTACCGAACCTATATAAACTCGCGGCTTGTGCAGCCAAG
CGGACACATATCGTCTGTTCGTCGTCATCATACAGT----------ACACCAGAAGTAAAACGAAGAAGAGTCGTCGTGC
TCGTGCGTGCGTGCAGCTCAGCCACGCCTTTGCATCCGAGAGGAGTGACAAGGGGAAGCATACATATATGGCGGCGGCCA
TGGAGCAGAGCAACGGG---GGCGGCGGCGTGAAGGTCAAGTTCATCGAGACGCAGTTCGTCAGCTCCGACGCCGCTAAC
TTCAAGTCCGTCGTGCAGCGGCTCACCGGCAAGTACTCCAAGATGCCGCCGCCGGCGT---CCTCGGTGCACAGGCCTCG
CCCGAGGCCGTGCGGCAGAGCCGACCAACAAGGGCGGCCGTGCGCCTCCGGCACCGACCAGCTGACGACGGCTGCGCCGG
CGAGGCCAACGGTGGTGGCCTTCGAGCCGCTGCACGTGGAACCGGAGCTGAACGAGCTCTGCGACTTCGCCGACCTGCTC
TACGCGACCCCGAGCGCGCGGCGCCACGGCGGCAGCATCGTCAACGGCTTTCCTTACTGATACTTGGCCCGT-----GAA
GAATCGTGTTACCCTTCTCTCTT----------------GAGGATCACGT------------------------------
----ATGTGACCCTTTTGCTCAAATGCTCACTGGGAGCGCCAGATGTGATCTTCCGCAAACACAAGTGGAAGTAAGAGGA
AAATACGAAAATGTATGAATATATTGTGTTCAGCGAAAAGGTAGAAGAAAGAGATGGGCATGTATGCTGGCAAACG-AGC
GAAGTGTGTCGTCTTCCTGTCGGGTTACATGGGCAACTGTA---------------------------------------
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--------------------------------------------------------------------AAATGTTCAATT
GGGTCAT--CTGTAGTAGAATTAGAATCGAATCGCTCAGGATGTTTCCAACCTTCTGCAGAACTGTGTAACATGATTAGA
ATTAGAATCTTTGTGGAATCAAAAAAGTG-TTATAATCTTCAGTGAAACCCGAATTCCCTGACCTGAACTGAACGACTGA
ACCCTAGCGCTTCAATCAGGAAGAAAACGACTGCCTCCGCTCTGCCAGTGGGCCTTGCCCGCATCTGCACCGGCCATTCA
GGAGTAGAAATTGTGCCGTTGTACTCGGGGCATCTCCGACGCTGACCGGTAATTTTGCTCCAATATTTGTCCACGGACAA
AGGAATCAATCTGCAGACACTGATGGTGGAGACGGCCATCCAATACTGCCCACATATATTTAAACAACTATGTGAACTAA
TTAAACAAAATTCATGCAAACACGGCGGATTTTCAATACATTTAGGGGAAAAAAAATCCTATCCTACCCTAAACCTATCT
GGCG----------------------------------------------------------------------------
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-----------------------------------------------------------AGCAGCGGCTTGAGCGTGAGC
GGCCTCGTAGATCGCACGCTGCTCGGCGACGAGTTGGGGTTCGCCGAGGCCATGGCCGGCATGCCCTCCTCGCTCGCTGT
CTATTTGGCCCTCCGCCAGCCGACGCTGCTCGAGGAGAAACAGGTTGTACCGTTGTTCCTCCTGCGCCTGCTGAAACACC
GACATAGGCGCCGGCGCAGAGTGCTCCTCCGCTATGGCAGCATTGAAGTGCGCCTCCGCCTGCTCCATGGTGAAGCTGGC
A
>chr7B_400
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-------------------------------------------------------------------------------T
ATTAGTGAAACCCAAATTCCCCG--AATTCCGGTGGAAAATGGGATGCCTGATTGAGAAGGGACGACATGGACGTTGGTA
AATTTTCCACGGTCAATTCAACACCTCGACTGATCTACAAGTTCCACAGCCGTCACTGTCTAGCTATTATGCCCCGTAAT
TTTCACACAAACAGAAAATTT-AGCACCACAAGCGGTAAAGAAGATCTCCAGGAGCCGAGAAGATGCCGCTGTCTAATCC
GCACGAGCCCTTGACCGCCTGGTCCGCCCCCGATCTCTGACTGCTCCTCCTGACTGGCTCGTATCTTTGACCAGACCGAT
CATCTGCCT--------------CCTCTTTCGTGTCTGACAGGTGGGCCTGCCACACGTGTGCCCCACCTGTCATGGGGC
TAGCGTTGTGGGGGAATCCGTGGCTATAGAG-TTGGCTTAGCTACCGAACCTATATAACCTCGCGGCTTGTGCAGCCAAG
CGGACACAGATCGTCTGTTCGTCGTCATCATACAGT----------ACACCAGAAGTAAAACGAAGAAGAGTCGTCGTGC
TCGTGCGTGCGTGCAGATCAGCCACGCCTTTGCATCCGAGAGGAGTGACAAGGGGGAGCATACATATATGGCGGCGGCCA
TGGAGCAGAGCAACGGG---GGCGGCGGCGTGAAGGTCAAGTTCATCGAGACGCAGTTCGTCAGCTCCGACGCCGCCAAC
TTCAAGTCCGTCGTGCAGCGGCTCACCGGCAAGTACTCCAAGATGCCGCCGCCGGCGT---CCTCGGTACACAGGCCTCG
CCCAAGGCCCTGCGGCAGACCCGACCAACAAGGGCGGCCTTGCGTCTCCGGCAGCGACGAGCTGATGATGGCTGCGCCGG
CGAAGCCAGCGGCGGCAGCTTTCGAGCCGCTGCGCGTGGA---GGAGGTGAACGAGCTCTGCGACTTCGCCGATCTGCTC
TACGCCGCCCCAAGCGCGCGGCGCCACGGCGGGAGCGTCGTAAATGGCTTTCCTTACTGATACATGCGTGGCCCGAAGAA
GAATCGTGTTACCCTTCTCA-TT----------------GAGGATCATGTATTTGTTTGAGGATTGACATTGCAGTACTG
GCAGATGTGATCCTTTTGCTCAAATGCTCACTGGGAGCGCCAGATGTGATCTTCCTCAAACACAAGTGGAAGTAAGAGGA
AAATACGAAAATGTATGAATATATTGTGTTGAGCGAAAAGGGAAAAGAAAGAGATGGATATGTATGCTGGTAAACTAT--
--GGTGTGTCGTCTTCTTGTCGGGTTACATGGGCAACTGTAAGGCTTCATTTGGATTTAAGAGGAGCTACTCCCAGGGAA
CAAGTGCCTCGGGGTGAAATTAGCCTGTGCAAACTTGAACCCCGTGGAAAATCTACATCGTCCTTTGGCTGTTGGGGCTC
GGGGGTAACCGGGGATTGGGGAAGGCCAAATCGAGAGCAGCGCTCAAGGCAGGAAGGAGTAGGCGGCATCGCTCTCGTTC
GTTGTTAGTGAGTCGTCGTGGGAGCGAGCGAGAGGGGGATTTCCTCCACGGCCTGTGGAGGCGTGGAAATCTCGGCCAGG
GAAGGGCCGCGGAAAGGGCCGGGGTCGCTCCCCTCTGTTGGGCACCAAATGCAGCGCTACCCTTCTCTGGATCGATTCGG
CCCAGGTATTTTCCAGCCAGGGAAAGGAGGGGGATCCCGGGTGGATCCCCGATTACCAAATGAGCCCTAAATGTTCAATT
GGGTCAT--CTGTAGTAGAATTAGAATCG-----CTCATGATGTTTCCAACCTTTTGCAGAACTGTGTAACATGATTAGG
ATTAGAATCTTTGTGGAATCAAAAAAAGAATTATAATCTTCAGTGAAACCCGACTCCCCTGACCTGCACTGAACGACTGA
G-CCTAGCGCTTCAATCACGAAGAAAACGACTGCCTCCGCTCTGCCAGTGGGTCTTGCCCACATCTGCACCGGCCATTCA
GGAGTAGAAGTTGTGCCGCGTCTCCA------------ACGCTGACCAGTAATTTTGCTCCGATATTTGTTCACGGATAG
AGGGATCAGTCTGCGGACACTGATGCCGAAGGCGGCCACCCAACGCTGTCCACATATATTTAAACAACTATGTGAATTAA
CTGGACAAAATTCATGCAAACACGACGGATTTTCAATACATTTACAA-AAAAGAAACACTATCCTACCCTAAACCTATCT
GGCGAAGTTTGGCATCCAAGCCTTTGTTGTTCCCTTCCTCGGACCGTGCCCTCCATCCTCCGTCTTCATGAGCACCGACG
ATAAGACCGATAAAGTAAAAGTGCGGTCTCCGGCGAGAAAGAGTAGAACATGCGAGACGGACTGACCAATATGGGACACA
AGGCCTTGCCGCCTCTCATGCCTTACTCATCCTTGGAGGAGTCTGTGCCTTGTCCGAACCGGTGGATGTGAGGTCCACAA
TGCAAATGGAGGCGTCGACGCTCTCGCCGTCCCACCGGGCCGCCGGAAAGTTCATAGGCGTCGCGTAGGACGCACAACTG
GCCTTGTTCACATTCGTGGTTGGCTGCAGCTCCGCCTCCGCGGCAGCCTGTTCCTGGCGAGCAGCGGCTTGAGCCTGAGC
GGCCTCGTAGATCGCACGCTGCTCGGCGATGATTTGGGGTTCTCCGAGGCCATGGCCGGCATGCCCTCCTCGCTCACTGT
CTATTTGGCCCTCCACCAGTCGACATTGCTCGAGGAGAAACATGTTGTACCATTGTTTCTCCCGCGCCTGCTGGAATGCC
GACATAGGCGCCGACGCAGAGTGCTCCTCCGCCATTGCAGCATTAAAGTGTGCCTCCGCCTGCTCCATGGTGAAGC----
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>chr7A_400
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-------------------------------------------------------------------------------T
ATTAATTTGACCCAAATTTTGCCCAAAATTCCGTGAAAAATGGGATGCCTGATTAAGAAGGGACGATATGGACGTTGGTG
AATTTTCCACGGTCAATTCAACACCTCGACCGATCTACAAGTTCCACACCCGTCACTGTCTAGCTATAATGCCCCGTAAT
TTTCGCACAAACAGAAAATTTTAGCACCACAAGTGGTAAAGAAGATCACCAGGA---GAGAAGATGCCGCTGTCTAATCC
GCACGAGCCCTTGACCGCCTGGTCCGCCCCCGATCTCTGACCGCGCCTCCCGACTGGCTCGTATCTTTGACCGGTCCGAT
CGCCTGCCGTTCCAGCACCCGTGCCTCTTCTCTCGCTGACAGGGAGGCCCACCCGACGTGTGCCCCACCTGTCATGGGCT
TCACGCTACAGTGGAACCCGTTGCCATAGAGTTTGGCTTAGCTACCGAACCTATATAAACTCGCGGCTTCTGCAGCCAAG
CGGACACATATCTTCTGTTCGCCGTCATCAACTCATCACACAGCACACACCAGAAGTAAAACGAAGAAGAGTCGTCGTGC
TCGTGCGTACGTGCAGCTTAGCCACACCTTTGCATCCGGGAGGAGTGACAAGGGGGAGCATACATACATGGCGGCGGCCA
TGGAGCGGAGCAACGGCGGCGGCGGCGGCGTGAAGGTCAAGTTCATCGAGACGCAGTTCGTCAGCTCCGACGCCGCCAAC
TTCAAGTCCGTCGTGCAGCGGCTTACCGGCAAGTACTCGAAGATGCCGCCGCCGCCGGCGGCCTCGGTGCACAGGCCACG
CCCGGGGCCGTGCGGCAGAGCCGGCCAACAAGGGCGGCCGTGCGTCTCCGGCAGCGACCAGCTGACGACGGCTGCGCCGG
CGAGGCCAACGGGGGCGGCCATCGAGCCGCTGCACGTGGG---AGAGCTGAACGAGCTCTGCGACTTCGCCGACCTGCTC
TACGCCGCCCCGAGCGCGCGGCGCCACGGCGGCAGCGTCGTCAACGGCTTTCCTTACTGATACATGGCCCGT-----GAA
GAATCGTGTTGCCCTTCTCCCCTTCGAGGAGGCTTTGTGGAGGAGCACGTATTGGTTTGAGGATTGCAGTTGCAGTACTG
GCCCAACATATCGTCTTGTTCAATTGCGCACTGAGAGCGCCAGATGTGATCTTCCTCGAACACAAGTGGAAGTGGGAGGA
AAATACGAAAATGTATGAATATATTGTGTTTGGTGAAATGGGAGAAGAAAGAGATGGATATGTATGCTGACAAACTAAGC
TAGGCGTATCGTTTTCCTGTCGGGTTACATGGGCAATTGCAATTTG----------------------------------
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-------------------------------------------------------------------TAAATGTACAATT
GGGTCATATCTGTAGTAGAACTGGAATCG-----CTCATGATGTTTCCGACCTTCTGCAGAACTGTGTGATAGGATTAGA
ATTAGAATCTTTGTGGAATCACAAAAAG----------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
--------S----S-------S--------S--SS--------------------------S------------------
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-------S--------------S--------------------------------S------------------------
--------------------------------------------------S-S------------------S-----S--
-----S----------------------------S---------------------------------------------
S-------------------------------------S-----------------------------------------
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-------------------------------------------------------S------------------------
----------------------------------------------------------------------------S---
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--------------------------------------------S--------S--------------------------
------------S--S------------------------SSS-------------------------------------
-----SS-----------------------------S--------------------------S----------------
-------------------S------------------------------------------------------------
----------S--------------------------------------------S------------------------
------------------------------S----------S---------------SS----------------S----
S-S-----------------------------------------------------------------------------
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-----------------------------SSSSS----S-----------------------------------------
--------------------------SSS------------------------S-S----------S-------------
SS----------------S---------------------------------S-------S-------------------
---------S--------SSSSS-SSSSSSSSSSSSSS---------S-------------S--------S------S-S
---S----S-----S----------SS-S--S------S----SS---S---------------------------S---
S-SS--------------------S-------------------SSSS----S---SS----------------------
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--------------------------------------------------------------------------S-----
-----------------------------S--S---------S--------------------------------S----
--------------S----S----SS----------------S--------S-----S----S----------S--SS--
-------------S------------------S--S--------S-----S-------------------------SSSS
S
>forward_52
--------------------------------TCCTCCTCAAGTCGTCCGAT----------------------------
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>reverse_2321
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ACCCTAGCGCTTCAATCAGG------------------------------------------------------------
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