>input_sequence_81867
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----------------------------------------ATGTGTATGGAGGCGCTACACTGGATTGCTTACGAGAAGA
TACATGGCACGGGTTCTTTCAGCTGCAAGGTCGCGGATACCGCAGCACAGGAACTCAAGAAGAAAATGAGAATAGGCGAA
GGTGGAGCATTTCCAGACGATGTTCTCAAGGAAATCAGCTCGAACATGGGGCTCCCCACCATCAAGAACATCATACGCCT
AACTTCCAAAAATTACGAGACGATGTACACTGCAGACAAGAAGGATGCTGCACAAGTTACTGTGGGGATGCTCAAAGAAG
GCCCGATAGTTGAAGGGATGGTCTATGGTGCGGGAGTAAATTGCAAAAAACCACCACAATTGAGGACCTTAATTCAGAAA
ACGACCACTATTCAG--TTTTTTTTTTAA---------------------------------------------------
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>chr6B_1_TraesCS6B01G143200
TCCCGGGAGTGCGTCGACTCGGTGGAGAGCAGGTACCTCCAGAACCCTGCCGTTCGAGATCATGCCCGGGAGAACGGCAA
TAAGGTTTTTGGGGAACGTCTCGGCGCGACTGCTCCCAATCCGTCCCCATCTCTGTCCGCCTCTGCTTCCACTACTTCCC
CTGCATCGACACCATGGTCGATGACGCCGCCGCCAAGAATAAGGCCACGGACGACGCCGAGGCTGCTTCTGCTGCCGCCG
CGTTGGTCTGGCTAAGCGGAGGGTATGATCTATTAATCCCTCGTTTACTTGTACGTGTGCTAGCCGTACATGTACTGCTC
ATAGATGGTTCGCTTCTACGTTATGCACGTGCTAGTATGTTTAGATATCGATATGAGATGCATACCATATTTGTCATGTT
TACTGCTTATTTGTGGATTAGTCTAATCGAAAAAGTGCTAATATTTCCAACAGATTGCAAGTTCCAGGGCGCAAGGGGCG
GGAAGCTCAATACCAGCCAGGCTACTGTGGTGCCGTCGTGTGACTGGTCGGACAAAGTCGGTGCTCCCATAAAGCAGCAC
GACAGTAAGTTGTTTTTCCGTTCTATAATTAAATACAAAGCATATCTTGATATACTCCCTCCTTCCATCTATATAGGGCC
TAATGCGTTTTTTAAGACCGCCTTTGACTATTGACAAGATTAATAGTACATGACATGCACAATGTGAAAATTATATCATT
GAAAACTCCTTTCACACACGAATTTAACGATGTGCTTTGTGTAAGTTGCATGTCATATATTATTGCTCTAATATTTGGTC
AAAGTTAGCCTCGAAAAACGCATTAGGCCCTATATAGATGGAAGGAGGGAGTAGCTTTTTTGGAGTTGATGTAACCTTTA
GTCAGAGCATACTCTCCCAAATATGATGTGGTTGATGAATGATAAATCATTACCCGCAAAAGAAAAATGATAAATCATTG
TGCTCCCTTTGCAGATACTTGTGTCATCTCCGCCTGCATCATGTGTATGGAGGCGCTACACTGGATTGCTTACGAGAAGA
TACATGGCACGGGTTCTTTCAGCTGCAAGGTCGCGGATACCGCAGCACAGGAACTCAAGAAGAAAATGAGAATAGGCGAA
GGTGGAGCATTTCCAGACGATGTTCTCAAGGAAATCAGCTCGAACATGGGGCTCCCCACCATCAAGAACATCATACGCCT
AACTTCCAAAAATTACGAGACGATGTACACTGCAGACAAGAAGGATGCTGCACAAGTTACTGTGGGGATGCTCAAAGAAG
GCCCGATAGTTGAAGGGATGGTCTATGGTGCGGGAGTAAATTGCAAAAAACCACCACAATTGAGGACCTTAATTCAGAAA
ACGACCACTATTCAG--TTTTTTTTTTAAAAACCGCCGCTATTGTGCTGACAGTTTTCAGAAAACGCTGATCACTAGATT
AGACACGTTTGACAAAAAAACTGATCACTGTGTCCCATTGTCAGGTGCCACGTGGCCGGAACGAGTTAACGTCGCTAGTG
GACATAATTCGCAAAAAAAAATATGGTGGTCAACCTCTCCTCTGCCTCCTTGGCATCTTGCCAAACACATAG--------
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-----------------------------------------CAGCCGCACCAGATTTGCAGCCGGTGCATCCCGCCGGCC
ACTACCCCAACGCTGCGTACGGCTGCTGCTCGCCGCCGGCCGCTGCCCCAACGC-TCATACTGCTGTTGCTCGCCGCTGG
TGCATACCGC-GGCCGCTGCCCCAACGCTGCGTACTGCTGCTGCTCGCCGCCGGTGCTTGTGCTCGCCACACGTCCACCT
CGTCGCCCTCGCGCTGTGGAGGATGGAGAGAGCAACCTCGACGGCTCCCTCGGGGAGAGCTCGGCCGTACTCTCGACGCC
CTCGGGAATCCCGGCACGCACCGGAGGCGGAGCAGGGCCTTGGCCATCGCGTCGGCTGTCGATCCCAGCATGACCTCGAT
TTGGTAGGCACCTCCGAACAAGCACGGCCCTGCCGGCTTCGACCAGCCCGACTGCCGGCCAATGAGCCTCCCAGCTCCGT
GCCGGCGAGGTGTCCGATGGCGTCGATGGCGTTGTTGGGATGGCGCGCGGACGATGCCGCTGCTCGCGCCCCTACCCCCG
CTGCGGCGCGCCCGTGCTCTGGAGGAGACGGAGTGCGCGGCCCGTGCTGCTGCTCGCGCGCCCGTGCGCAATCGGGGCTG
GTGCTCGCGCGCCAGTGTGTGGCCGGTGCTGGTGCTCGCGCGCCCGTGCGCGGCCATGGCCACTGTCGCTGCTGGCGCCC
GTGCGCGGCCGGTGCTGCTGCTCGCGCGCCCATGTGTGGCCGCCGCTGCTGCTCGAGTCCCCAAGAACGGCGGGGCGGCG
GCGGATTGACTCGCCGGCGGCGACCGGCGGTCCGGCGCGG
>chr3A_1314
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---------------------------------GAGTAAATTGCAAAAAACCACCACAATTGAGGACCCTAATTCAGAAA
ACGACCATCATTCAT--TTTTTTTTCAAAAAACCACCACCATTGTGCTGACAATTTTCAGAAAACGCTGATCACTGGATT
AGACACGTTTGATAAAAAATCTGACCATTGGATCCCATTGTCAGGTGCCATGTGGCCGGAACGAGTTAACGTCGCTAGTG
GACATAAGTCG--AAAAAAAAAGTGGTGGTCAACCTCTCCTCTGCCTCCTTGGCATTTCGGCAACCACATAG--------
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-----------------------------------------CAGCCGCACCAGATTGGCAGCCGGTGCATCCCGCCGGCC
G-----------------------------------------CTGCCCCAACGCTTCGTACTGCTGTTGCTCGCCGCCGG
TGCATACCGCTGGCCGCTGCCCCAACGCTGCGTACTACTGCTGCTCGCCGCCGGTGCTTGTGCTCGCCACACGTCCAGCT
CGCGGCCCCCGCGCTGTAGACGATGGAGAGAGCAACCT------CTCCCTCGGGGAGAGCTCGGCCGTGCTCTCGACGCC
CTCGGGAATCCCGGCACGCACCGGAGGCAGAGCAGGGCCATGGCCATCGCGTCGGCTGTCGATCCCAGCATGACCTCGAT
TTGGTAGGCGCCTCCGAACAAGTACGGCCCTGCCGGATCCGGCCAGCCCGACTGCCGGCCAACGAGCCTCCCAGCTCCGC
GCCGGCGAGCTGTCCGATGGCGT---------TCTTGGGATGGCGCGCGGACGATGCCGCTGCTCGCGCCCA--------
--------------TGCTCTGGAGGAGACGGCGTGCGCGGCCGGTGCTGATGCTCGCGCGCCCGTTGGCAGTCGGGGCTG
GTGCTCGCGCGCCAGTGCGCGGCCGGTGCTGGTGCTCACGCGCCCGTGCGCGGCCATGGCTACTCTCGCTGCTGGCGCCC
GTGCGCAGCCGGTGCTGCTGCTTGCGCACCCGTGCGTGGCCGCCGCTGCTGCTCGAGTCCCCAAGAACGGCGGGGCGGCG
GCGGGTTGACTCGCCGGCGGCGACCGCC-GTCCGGCGCGG
>chr6A_1326
AAAAA---------------------------------------------------------------------------
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---------------------------------------------------CACCACAATTGAGGATCCTAATTCAGAAA
ATGACCACCATTTATTTTTTTTCTTCAAAAAACCACCACCATTGTGCTGACAATTTTCAGAAAACGCTGATCACTGGATT
AGACACGTTTGACAAAAAAA--GACCATTGGGTCCCATTGTCAGGTGCCATGTGGCCGGAACGAGTTAACGTCGCTAGTG
GACATAATTCG--AAAAAAAAAGTGGTGGTCAACCTCTCCTCTGCCTCCCATGGGTCGGGCTCTCGTGCTGGGTTCCCTG
CACGCAGTAGCCTGCAGGGCCAATCAAACGCCAACAGCTGTCTTTGTGGACCCCACCACACATAAAACAACTTCCTTCTA
ATTTACCGACTGTATTTTCTCTTGCCTTATCCACGCGACTAATGCCGTGAGGTCCATCCGACCGGACCATGGCCGGCGGC
AAGATAGAAGCTGTCGCAGTGTCGCGGCTAGCGCCGCCCGCCTCCGGCGCGCTGCACCGCCTGTTGCTGTGGTTTTCCCT
GCCGCTAATGTGATTGAAAAATAGAGAACAATGGATAGGTGAAGCTTTCCCTGCACTTAGTACGCACAGGTGAAGCTGGA
TAGCTCGTATACTTCAAACTTCACTACGTGCATATGCAATATCCGGATAGGTCAGTACTAGCTGGCTAGTACAGAGGTCG
ACGAAGCAATGGAGTTTGCTTCCTCGTATCTTCAAGTGTGGCTGTACGACCTCCCACGGCACCTCAGCCACCGTCCACGG
CCGAGGGATCGCACGCGCTGCATTTCGAGCTTCTCCCAGCAGGGAGCAGGTCGGCCCTGCCAGAGAACTATGGCCTGGGA
AAGAGCTGCCTTGGCCTGGGCTTGGGCACGCCGGAGGCGGGCGGCCGTAACGGCGTAGCCGTGATGGCTCATGGCTCCTG
TCTTGGCGCCGGGGTTCTCCGGCCACAGTCCGATGCGACGGACCTTACCGCGTCGGAATCCCCGTCCCACGGAGTAAATT
AGAAGGAAATTGTTTATGAGTGATGGGGTCCACCAAGACAGCTGTTGGCGTTTGATTGGCCCTGCAGGCTACTGCGTGCA
GGGAACCCAGCACGAGAGCCCGACCCGCCTCCCATTGTCTACAGCCGCACCAGATTGGCAGCCGGTGCATCCCGCCGGCC
GCTGCCCCAACGTTGCGTACGGCTGCTGCTCGCCGCCGGCCGCTGCCCCAACGCTTCGTACTGCTGTTGCTCGCCGCCGG
TGCATACCGCTGGTCGCAGCCCCAACGCTGCGTACTGCTGCTGCTCGCCGCCGGTGCTTGTGCTCGCCACACGTCCAGCT
CGCCGCCCCCGCGCTGTAGACAATGGAGAGAGCTACCTCGGCGGCTCCCTCGGGGAGAGCTCGGCCGTGCTCTCGACGCC
CTCGGGAATCCCGGCACGCACCGGAGGCAGAGCAGGGCCATGGCCATCGCGTCGGCTGTCGATCCCAGCATGACCTTGAT
TTGGTAGGCACCTCCGAACAAGTACGTCCCTGCCGGCTCCGGCCAGCCCGACTGCCGGCCAACGAGCCTCCCAGCTCCGC
GCCGGCGAGCTGTCCGATGGCGT---------TGTTGGGATGGCGCGCCGACGATACCGCTGCTCGCGCCCA--------
--------------TGCTCTGGAGGAGACGGCGTGCGCGGCCGGTGCTGATGCTCGCGCGCCCGTGGGCAGTCGGGGCTG
GTGCTCGCGCGCCAGTGCGCGGCCGGTGCTAGTGCTCACGCGCCCGTGCGCGGCCATGGCTACTCTCGCTGCTGGCGCCC
GTGCGCGGCCGGTGCTGCTGCTCGCGCGCCCGTGCGTGGCCGCCGCTGCTGCTCGAGTCCCCAAGAACGGCGGGGCGGCG
GCGGGTTGACTCGCCGGCGGCGACCGGCGGTCCGGCGCGG
>chr4D_1422
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---------------------------------------------------------------ACGCTGATCACTGGATT
AGACACGTTTGACAAAAAATCTGACCACTGGGTCCCACTGTCAAGTGCCATGTGGCCGGAACGAGTTAACGTCGCTAGTG
GACATAATTCG--CAAAAAAAAGTGGTGGTCAACCTCTCCTCTGCCTCCTTGGCATTTCGCCAAACACATAG--------
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-----------------------------------------CAGCCGCACCAGATTGGCAGCCGGTGCATCCCGCCGGCC
GCTGCCCCAACGCTGCGTACGGCTGCTGCTCGCCGCCGGCCGCTGCCCCAACGCTTCGTACTTCTGTTGCTCGCCGCCGG
TGCATACCGCTGGCCGCTGCCCCAACGCTGCGTACTGCTGCTGCTCGCCGCCGGTGCTTGTGCTCGCCACACGTCCAGCT
CGCCGCCCCCGCGCTGTAGAGGATGGAGAGAGCAACCTCGGCGGCTCCCTCGGGGAGAGCTCGGCCGTGCTCTCGACGCC
CTCGGGAATCCCGGCACGCACCGGAGGCAGAGCAGGGCCATGGCCATCGCGTCGGTTGTCGGTCCCAGCATGACCTCGAT
TTGGTAGGCGCCTCCGAACAAGCACGGCCCTGCCGGCTCCGGCCAGCCAGACTGCCGGCCAACGAGCCTCCCAGCTCCGC
GC-----------------GCGT---------TGTTGGGATGGCGCGCGGACGATGCTGCTGCTCGCGCCCA--------
--------------TGCTCTGGAGGAGACGGCGTGCGCGGCCGGTGCTGATGCTCGCGCGCCCGTGGGCAGTCGGGGCTG
GTGCTCGCGCGCCAGTGCGCGGCCGGTGCTGGTGCTCACGCGCCCGTGCGTGA---------------------------
---------------------------------------CCGCCGCTGCTGCTCGAGTCCCCAAGAACGGCGGGGCGGCG
GCG-------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------S-----------
--------S-----S----------SS-------S--S-S------------S----------------------S----
------------------------S-----S-------------------S-----------------------------
-----------SS--------SS-----------------------------------S---------------------
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--------------------------------------------------------S-----------------------
S--S-----------------------------------------------------S-------------------S--
-----------------------------------------------------------------------------S--
--S-----S--------S----------------------S---------------------------S-----------
----------------------------S----------S----------------------------------------
--------------------------------------S--S--------------------S----------------S
---------S-------------SSSSSSSSS---------------------------------------SSSSSSSSS
SSSSSSSSSSSSSS-----------------S----------S------S----------------S---S---------
-----------------S-S-----------------S----------------------S---S---------------
-------------------------------S--S---------------------------------------------
----S-----------------------------------
>forward_540
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----------------------------------------TGACTGGTCGGACAAAGTCG--------------------
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>reverse_2658
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-----------------GGAGGATGGAGAGAGCAACC-------------------------------------------
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