>input_sequence_81850
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--------------ATGGCGTTAGCATCGGGACCCGCGGCCACGTTCTCCGCCCGCCCCGCGGCGCCGGGCGCCGGCCGG
CCCTACTCGTGCGCAGCCGCGGCCACCGGAGGTGCCAGGTTCCGCGGCGCCGACGGGAAGTGGTGGGCGCCGCTGCTGGG
GTGGTCGGGCCAGCCAGACTACATCGACGCCCAGCCGGCGCCTGCACCGGTGTCGGAGGAGGAGCGGGCTGCTGCAGGCG
GTGCAGCGGGGGCGAGGCGGTTCGGGGTGCTGACGGAGGAGAAGGCGCGGCAGCTGCGGGTGCGGATGATGGAGACGGAG
AGCTTCCACGACGCCATGTACCACTCCGCCATCGCCTCCCGCCTCGCCTCCGCCGCGCGCGACGGCGACGCCAAGCCGTA
G-------------------------------------------------------------------------------
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--------------
>chr3D_1_TraesCS3D01G128300
AAGTCATGTGACAATCTTGCTGATATGTTCACTAAATCATTACCGGCATCAACCTTAGAGAGGTGTGTGCGTGGAATCGG
TATGATGAGACTTAGAGAGATGCAAGGTTCAGGGGGAGAAACTTCACAAACTCGTCGCTAAAACCTCAATCCTGATGATC
GAGTACTCAACTTGATGGTTGAGTGGATTGTACTCTTTTTCCCTTGAGTGAGTTTTCCTGATGTTTCTCACACGAGGTTT
TTGACGAGGCAATTCGTGCAATACAACAACGTATACTGTGTGCTCTTTCTCCACATTTTTTTCCCACTGGGTTTTTCGGA
G-TTTT-GAGGCATGGATATACGGATAATTACCCAAGGGGGAGTGTTGGGAAACCGGGGCGACCGAGT-GTGGCGGCGGC
CTCGTGCGTATCGCACGGGG-CTAGCCCCTCCCG-TTCCCCCACTTTACGTTAAGTGGGTACTTATCCCTTGACCACCTA
CCCCCTATATAAAGCAACGAGGAGCCATCATTGTAACACCTGATCATTGATTAATAAAGCTGGTCTCCTCTATCTCCCTG
TGTCA-CTTTTACTTTCGCATACTTCGACT----------CTTCGTCTACGACGCTCGCTCTCGCTCCGCAACCTCGGAC
CGGACTCGCCGGCGAAGTTGCGGAACATCTCTTCCAAAAAGCGGGCACGCGCCCGCAGTCACGGGCGCGCACACACACCC
CCCACCGTGAAAGCGAGCGACAGAT-CGCCCCGTGCGATGCGTGCCGCGTGCCCCAT----------CCCATTCCT--CG
CCCAGCCCGCGGCGCGAACCTTATCCACCCGTTCCCGTTCCCCCTCCCCCGCTTTA-TAACCCCACCACCATTCTCGC--
--------------TTCCATCCCACCACCTTTTCT--CAGCAG----AAGCAACGAAGCCAAGCCAAGCC--AATCCATC
TCCTCTCGTCTACTCTCGGCTGCGAATTAAACCCACCCGCGAATCCTCCGATTCTTATTCTTCCTCTCGCGGCGCGGCGC
GAATCAGTGATCAAATGGCGTTAGCATCGGGACCCGCGGCCACGTTCTCCGCCCGCCCCGCGGCGCCGGGCGCCGGCCGG
CCCTACTCGTGCGCAGCCGCGGCCACCGGAGGTGCCAGGTTCCGCGGCGCCGACGGGAAGTGGTGGGCGCCGCTGCTGGG
GTGGTCGGGCCAGCCAGACTACATCGACGCCCAGCCGGCGCCTGCACCGGTGTCGGAGGAGGAGCGGGCTGCTGCAGGCG
GTGCAGCGGGGGCGAGGCGGTTCGGGGTGCTGACGGAGGAGAAGGCGCGGCAGCTGCGGGTGCGGATGATGGAGACGGAG
AGCTTCCACGACGCCATGTACCACTCCGCCATCGCCTCCCGCCTCGCCTCCGCCGCGCGCGACGGCGACGCCAAGCCGTA
GAGCGCGGAGCCGAGCAGCTCAGGC------TCAGCTCGCCGGCCGGAGCCATGGGAGACGCGCTGTCTGTGTACAGCTG
TACATACGCTTTCGTTTGTTTTGTCTGTCCGGTTGATCGTTACTGTACACCATTAGA----CAAGAAGAGGCCGGTAATA
TTTAGGACAGCGCCCCTTCAGACCCTCCT----GAACTTGATTATTCCATGGAGATGGGACTGCTTACTTAATCTCAC--
-TAGTTCTGAAGCAAAACTAGCTAGCAGTAGCACCTGATGAATGATGAATGTACAAAAATAATTTGGTTGTGCTGATGAT
TTCAGTTTCGGTTTGCTCATCAGTGTTTTACT------GCAAGGTGTTGGTTACGCTGAATCCAACTCTGCGGTGGAATC
ACAGTCGATTGTCAAATTCAGATGCTTGCGAGTTGCAAAAATGATCACTGATTGATGTTTCTCCGGTCACCGTGGATTGC
ATCA-CTGCAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GTCGTCTTCACCAATAATTAACCCATGGGACTTTGCCTACCTGT
CGACCCCCTCCTGATAAGTAC----TCCCTCCGTTTTGTACAAAGTTACTCCCTCCGTCCCAAAATAAATGACTCAACTT
TATACTAACTTTGTATAAAATTGAGTCACTTATTTTAAAACGGAGGGAGTACTAAGTAATCCTAGTAGTTTATTATAAAG
AGGATTAACACATCCAACGTCATCACCATTTGATTCAACTCTGTGTCGTTCGCTGCCGGTCCGCCATTGGCCGGCTTGAG
AGACTGACGCCGACCTCTGCCTTTGATCCGGTCTGATCCGATCCATGTTAGATTAGATATCTTTTTTTTTGAAGGAATAA
CCTTGTATTCCATTATAAATTTAGACTGGCCGAATCGCCAGCTACAGAGTTTACAACAAACTCAGGGAAATAGCCTAGCC
AAGTTTCATATTCACCATCTCCTAATCTTACACCATGTCTTGCTAGGCTGTGAGCTGCTACATTACAAGATCTTGGACAA
ACACTAACATTTAC
>chr3D_1
AAGTCATGCGACAATCTTGCTGATATGTTCACTAAATCATTACCGGCATCAACCTTAGAGAGGTGTGTGCGTGGAATCGG
TATGATGAGACTTAGAGAGATGCAAGGTTCAGGGGGAGAAACTTCACAAACTCGTCGCTAAAATCTCAATCCTGATGATC
GAGTACTCAACTTGATGGTTGAGTGGATTGTACTCTTTTTCCCTTGAGTTAGTTTTCCTGATGTTTCTCACACGAGGTTT
TTGACGAGGCAATTCGTGCAATACAACAACGTATACTGTGTGCTCTTTCTCCACA-TTTTTTCCCACTGGGTTTTTCGGA
G-TTTTTGAGGCATGGATATACGGATAATTACCCAAGGGGGAGTGTTGGGAAACCGGGGCGACCGAGT-GTGGCGGCGGC
CTCGTGCGTATCGCACGGGG-CTAGCCCCTCCCGTTTCCCCCACTTTACGTTAAGTGGGTACTTATCCCTTGACCACCTA
CCCCCTATATAAAGCAACGAGGAGCCATCATTGTAACACCTGATCATTGATTAATAAAGCTGGTCTCCTCTATCTCCCTG
TGTCA-CTTTTACTTTCGCATACTTCGACTACTTCGTCTACTTCGTCTACGACGCTCGCTCTCGCTCCGCAACCTCGGAC
CGGACTCGCCGGCGGAGTTGCGGAACAT----------------------------------------------------
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--------------
>chr3D_1
AAGTCCTGTGACAATCTTGCTGATATGTTCACTAAATCATTACCGGCATCAACCTTAGAGAGGTGTGTGCGTGGAATCGG
TATGATGAGACTTAGAGAGATGCAAGGTTCAGGGGGAGAAACTTCACAAACTCGTCGCTAAAATCTCAATCCTGATGATC
GAGTACTCAACTTGATGGTTGAGTGGATTGTACTCTTTTTCCCTTGAGTGAGTTTTCCTGATGTTTCTCACACGAGGTTT
TTGACGAGGCAATTCGTGCAATACAACAACGTATACTGTGTGCTCTTTCTCCACA-TTTTTTCCCATTGGGTTTTTCGGA
G-TTTT-GAGGCATGGATATACGGATAATTACCCAAGGGGGAGTGTTGGGAAACCGGGGCGACCGAGT-GTGGCGGCGGC
CTCGTGCGTATCGCACGGG--CTAGCCCCTCCCGTTTCCCCCAGTTTACGTTAAGTGGGTACTTATCCCTTGACC-CCTA
CCCCCTATATAAAGCAACGAGGAGCCATCATTGTAATCCCTGATCATTGATTAATAAAGCTGGTCTCCTCCATCTCTCTG
TGTCA-TTTTTACTTTCGCATACTTCGA---------CTACTTCGTCTACGACGCTCGCTCTCGCTCCGCAACCTCGGAC
CGGACTCGCCGGCGGAGTTGCGGAACA-----------------------------------------------------
--------------------------------------------------------------------------------
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--------------
>chr3D_1
AAGTCCTGTGACAATCTTGTTGATATGTTCACTAAATCATTACCGGCATCAACCTTAGAGAGGTGTGTGCGTGGAATCGG
TATGATGAGACTTAGAGAGATGCAAGGTTCAGGGGGAGAAACTTCACAAACTCGTCGCTAAAATCTCAATCCTGATGATC
GAGTACTCAACTTGATGGTTGAGTGGATTGTACTCTTTTTCCCTTGAGTGAGTTTTCCTGATGTTTCTCACACGAGGTTT
TTGACGAGGCAATTCGTGCAATACAACAACGTATACTGTGTGCTCTTTCTCCACA-TTTTTTCCCACTGGGTTTTTCGGA
G-TTTT-GAGGCATGGATATACGGATAATTACCCAAGGGGGAGTGTTGGGAAACCGGGGCGACCGAGT-GTGGCGGCGGC
CTCGTGCGTATCGCACGGG--CTAGCCCCTCCCGTTTCCCCCAGTTTACGTTAAGTGGGTACTTATCCCTTGACC-CCTA
CCCCCTATATAAAGCAACGAGGAGTCATCATTGTAATCCCTGATCATTGATTAATAAAGCTGGTCTCCTCCATCTCTCTG
TGTCA-TTTTG-CTTTCGCATACTTCGA---------CTACTTCGTCTACGACGCTCGCTCTCGCTCCGCAACCTCGGAC
CGGACTCGCCGGCGGAGTTGCGGAACA-----------------------------------------------------
--------------------------------------------------------------------------------
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--------------
>chr1D_1
AAGTCATGTGACAATCTTGCTAATATGTTCACTAAATCATTACCGGCATCAACCTTAGAGAGGTGTGTGCGTGGAATCGG
TATGATGAGACTTAGAGAGATGCAAGGTTCAGGGGGAGAAACTTCACAAACTCTTCGCTAAAATCTCAATCCTGATGATC
GAGTACTCAACTTGATGGTTGAGTGGATTGTACTCTTTTTCCCTTGAGTGAGTTTTCCTGATGTTTCTCACACGAGGTTT
TTGACGAGGCAATTCGTGCAATACAACAACGTATACTGTGTGCTCTTTCTCCACA-TTTTTTCCCACTGGGTTTTTCGGA
GTTTTT-GAGGCATGGATATACGGATAATTACCCAAGGGGGAGTGTTGGGAAACCGGGGCGACCGAGT-GTGGCGGCGGC
CTCGTGCGTATCGCACGGGG-CTAGCCCCTCCCGTTTCCCCCACTTTACGTTAAGTGGGTACTTATCCCTTGACCACATA
CCCCCTATATAAAGCAACGAGGAGCCATCATTGTAACACCTGATCATTGATTAATAAAGCTGGTCTCCTCTATCTCCCTG
TGTCA-CTTTTACTTTCGCATACTTCGA---------CTACTTCGTCTACGACGCTCGCTCTCGCTCCGCAACCTCGGAC
CGGACTCGCCGGCGGAGTTGCGGAACAT----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------
>chr1D_1
AAGTCCTGTGACAATCTTGCTGATATGTTCACTAAATCATTACCGGCATCAACCTTAGAGAGGTGTGTGCGTGGAATCGG
TATGATGAGACTTAGAGAGATGCAAGGTTCAGGGGAAGAAACTTCACAAACTCGTCGCTAAAATCTCAATCCTGATGATC
GAGTACTCAACTTGATGGTTGAGTGGATTGTACTCTTTTTCCCTTGAGTGAGTTTTCCTGATGTTTTTCACACGAGGTTT
TTGACGAGGCAATTCGTGCAATACAACAACGTATACTGTGTGCTCTTTCTCCACA-TTTTTTCCCATTGGGTTTTTCGGA
G-TTTT-GAGGCATGGATATACGGATAATTACCCAAGGGGGAGTGTTGGGAAACCGGGGCGACCGAGT-GTGGCGGCGGC
CTCGTGCGTATCGCACGGG--CTAGCCCCTCCCGTTTCCCCCAGTTTACGTTAAGTGGGTACTTATCCCTTGACC-CCTA
CCCCCTATATAAAGCAACGAGGAGCCATCATTGTAATCCCTGATCATTGATTAATAAAGCCGGTCTCCTCCATCTCTCTG
TGTCATTTTTTACTTTCGCATACTTCGA---------CTACTTCGTCTACGACGCTCGCTCTCGCTCCGCAACCTCGGAC
CGGACTCGCCGGCGGAGTTGCGGAACA-----------------------------------------------------
--------------------------------------------------------------------------------
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--------------
>chr6D_1
AAGTCATGTGACAATCTTGCTGATATGTTCACTAAATCATTACCGGCATCAACCTTAGAGAGGTGTGTACGTGGAATCGG
TATGATGAGACTTAGAGAGATGCAAGGTTCAGGGGGAGAAACTTCACAAACTCGTCGCTAAAATCTCAATCCTGATGATC
GAGTACTCAACTTGATGGTTGAGTGGATTGTACTCTTTTTCCCTTGAGTGAGTTTTCCTGATGTTTCTCACACGAGGTTT
TTGACGAGGCAATTCGTGCAATACAACAACGTATACTGTGTGCTCTTTCTCCACA-TTTTTTCCCACTGGGTTTTTCGGA
G-TTTT-GAGGCATGGATATACGGATAATTACCCAAGGGGGAGTGTTGGGAAACCGGGGCGACCGAGT-GTGGCGGCGGC
CTCGTGCGTATCGCACGGGG-CTAGCCCCTCCCGTTTCCCCCACTTTACGTTAAGTGGGTACTTATCCCTTGACCACCAA
CCCCCTATATAAAGCAACGAGGAGCCATCATTGTAATCCCTGATCATTGATTAATAAAGCTGGTCTCCTCTATCTCCCTG
TGTCA-CTTTTACTTTCGCATACTTCGA---------CTACTTCGTCTACGACGCTCGCTCTCGCTCCGCAACCTCGGAC
CGGACTCGCCGGCGGAGTTGCGGAACA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------
>chr6D_1
AAGTCCTGTGACAATCTTGCTGATATGTTCACTAAATCATTACCGGCATCAACCTTAGAGAGGTGTGTGCGTGGAATCGG
TATGATGAGACTTAGAGAGATGCAAGGTTCAGGGGGAGAAACTTCACAAACTCGTCGCTAAAATCTCAATCCTGATGATC
GAGTACTCAACTTGATGGTTGAGTGGATTGTACTCTTTTTCCCTTGAGTGAGTTTTCCTGATGTTTCTCACACGAGGTTT
TTGACGAGGCAATTCGTGCAATACAACAACGTATACTGTGTGCTCTTTCTCCACA-TTTTTTCTCACTGGGTTTTTCGGA
G-TTTT-GAGGCATGGATATATGGATAATTACCCAAGGGGGAGTGTTGGGAAACCGGGGCCACCGAGGGGTGGCGGCGGC
CTCGTGCGTATCGCACGG-G-CTAGCCCCTCCCGTTTCCCCCACTTTACGTTAAGTGGGTACTTATCCCTTGACC-CCTA
CCCCCTATATAAAGCAACGAGGAGCCATCATTGTAATCCCTGATCATTGATTAATAAAGCTGGTCTCCTCCATCTCTCTG
TGTCA--TTTTACTTTCGCATACTTCGA---------CTACTTCGTCTACCACGCTCGCTCTCGCTCCGCAACCTCGGAC
CGGACTCGCCGGCGGAGTTGCGGAACAATCT-------------------------------------------------
--------------------------------------------------------------------------------
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--------------
>chr7D_1
AAGTCATGTGACAATCTTGCTGATATGTTCACTAAATCATTACCGGCATCAATCTTAGAGAGGTGTGTGCGTGGAATCGG
TATGATGAGACTTAGAGAGATGCAAGGTTCAGGGGGAGAAACTTCACAAACTCGTCGCTAAAATCTCAATCCTGATGATC
GAGTACTCAACTTGATGGTTGAGTGGATTGTACTCTTTTTCCCTTGAGTGAGTTTTCCTGATGTTTCTCACACGAGGTTT
TTGACGAGGCAATTCGTGCAATACAACAACGTATACTGTATGCTCTTTCTCCACA-TTTTTTCCCACTGGGTTTTTCGGA
G-TTTT-GAGGCATGGATACACGGATAATTACCCAAGGGGGAGTGTTGGGAAACCGGGGCGACCGAGT-GTGGCGGCGGC
CTCGTGCGTATCGCACGG-GGCTAGCCCCTCCCGTTTCCCCCACTTTACGTTAAGTGGGTACTTATCCCTTGACCACCTA
CCCCCTATATAAAGCAACGAGGAGCCATCATTGTAACACTTGATCATTGATTAATAAAGCTGGTCTCCTCTACCTCCCTG
TGTCA-CTTTTACTTTCGCATACTTCGA---------CTACTTCGCCTACGACGCTCGCTCTCGCTCCGCAACCTCGGAC
CGGACTCGCCGGCGGAGTTGCAGAACA-----------------------------------------------------
--------------------------------------------------------------------------------
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--------------
>chr2D_1
AAGTCCTGTGACAATCTTGCTGATATGTTCACTAAATCATTACCGGCATCAACCTTAGAGAGGTGTGTGCGTGGAATCGG
TATGATAAGACTTAGAGAGATGCAAGGTTCAGGGGGAGAAACTTCACAAACTCGTCGCTAAAATCTCAATCCTGATGATC
GAGTACTCAACTTGATGGTTGAGTGGATTGTACTCTTTTTCCCTTGAGTGAGTTTTCCTGATGTTTCTCACACGAGGTTT
TTGACGAGGCAATTCGTGCAATACAACAACGTATACTGTGTGCTCTTTCTCCACA-TTTTTTCCCAATGGGTTTTTCGGA
G-TTTT-GAGGCATGCATATACGGATAATTACCCAAGGGGGAGTGTTGGGAAACCGGGGCGACCGAGT-GTGGCGGCGGC
CTCGTGCGTATCGCACGG-G-CTAGCCCCTCCCGTTTCCCCCAGTTTACGTTAAGTGGGTACTTATCCCTTGACC-CCTA
CCCCCTATATAAAGCAACGAGGAGCCATCATTGTAATCCCTGATCATTGATTAATAAAGCTGGTCTCCTCCATTTCTCTG
TGTCA--TTTTACTTTCGCATACTTCGA---------CTACTTCGTCTACGACGCTCGCTCTCGCTCCGCAACCTCGGAC
CGGACTCGCCGGCGAAGTTGCGGAACACTTTTC-----------------------------------------------
--------------------------------------------------------------------------------
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--------------
>chr3B_652
--------------------------------------------------------------------------------
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---------------------------TCTTTTCCAAAAATCA--CACGCGCCCGCAGTCACGGGCGCACACAC-----C
CCCACCGTAAAAGCGACGGCAGGGAGCGCCCCGTGCGATGCGTGCCGCGTGGCCGCCCCGGCCCATCCCCCTCCCCAGCG
CCCAGCC-----CGCGAACCTTATCCACCCGTTCGT------CCTCCCCCGCTTTA-TAACCCCACCACCATCCTCGC--
--------------TCCCATCCCACCACCTTTTTT--GAGCAG----AAGCAACCAAACGAA-CCAGGCC--AATCCGTC
TCCTCTCCTCCACTCTCGGCTGCGAATTAAACCCACCCGCGAATCCTCCGATTCATCTACTTCCTCTTGCGGCGCGGCGC
GAATCAGTGATC-AATGGTGTTAGCATCGGGACCCGCGGCCACGTTCTCCGCCCGGCCCGCGGCGCCGGGCGCCGGCCGG
CCCTGCTCGTGCGCCGCCGCGGCCACCGGAGGTGCCAGGTTCCGCGGCGCCGACGGGAAGTGGTGGGCGCCGCTCCTCGG
GTGGTCGGGCCAGCCCGACTACATCGACGCCCAGCCGGCGCCTGCACCGGCGACGGAGGAGGAGCGGGCTGCTGCT---G
GTGCTGCGGGGGCGAGGCGGTTCGGGGTGCTGACGGAGGAGAAGGCGCGTCAGCTGCGGCTGCGGATGATGGAGACGGAG
AGCTTCCACGACGCCATGTACCACTCCGCCATCGCATCCCGCCTCGCCTCCGCCGCGCGCGACAGCGACGCCAAGCCATA
GAGCGCGGAGCCGAGCAG------C------TCAGCTCGCCGGCCGGAGCCATGGGAGACGCGCTGTCTGTGTACAGCTG
TACATACGCTTTCGTTTGTTCTGTCTGTCCTGTTGATCGTTACTGTACCCCATTAGA----CAAGAAGAAGCCAGTAATA
TTTAGGACAGGGCCCCTTCAGACCCTCCT----GAACTTGATTATTCCATGGAGATGGGACTGCTTAGTTAATCTCAC--
-TAGTTCTGGAGCAAAACTAGCTAGCAGTAGCACCTGATGAATGATGAATGTACAAAAATAATTTGGTTGTGCTGATGAT
TTAAGTTTCGGTTTTCTTATCAGTGTTTTACT------GCAAGGTGTTGGTTACGCTGAATCCAACTCC---GTGGAATC
ACAGTCGATTGTCAAATTCAGATGCTTGCGAGCTGC-AAAATGACCACTGATTGATGTTTCTCAAGTCACTGTGGATTGC
ATCAACTGCACGTCGTGTTTAGGAGGGGAACTTTTGGCCTAGGTGTATCTGAAAATCTGAAAATAACTTTACGAAAACAA
TTTAGTAATTTTACGAAAAGTCAAAAAAATCTGAAAATATTTTTGAAATAAACTTGACCTTTTATTGTGCTTGTCAGAAA
AATTCCACAAAAAGAAAACCAGCCTTTGACTTCTTTTCAAAAAGACAAATTTTTGGCCAAAGTAGCGTGAATAGTGAGCT
ATAATAGCAATACATTTTGTCTTTTTTGCTCTGATGAAGTCAATGTTGGTTTTTTGTTCGTGAAAATTTATATACTAGCG
TAAAAGTAAGTCGAGTTTATTCAAAAAATATTTTTGAACTATTTTGATTTTTTATTTAATTATTAAAAAATCCCCATATA
GGGGTATCTACAATCAGGAACCAAAGCGTATTTTCAGTCGTCTTCACCAATAATTAACCCATGGGACTTTGCGTCCCTGT
CGACCCCCTCCTGATACGTAAGTAATCCC---------------------------------------------------
---------------------------------------------------------------AGTGGGTTATTATAAAG
AGGATTAACACATCCAACGTCATCGCCATTTGATTCAACTCTGTGTCGTGCGCTGCCGGTCCGCCATTGGCCGGCTTGAG
AGACTGACGCCGACCTCTGCCTTTGATCCGATCTGATCCCATCCATGTTAGATTAGACATC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>chr3A_730
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CGCCACGTGCGATTCGCGCCGCGTGGCCGCCCCGGCCCATCCCCTTCCCC--CG
CCCAGCC-----CGCGAACCTTATCCACCCGTTCG------CCCCCCTCCGCTTTATTAACCCCACCACCATTCTCGGCT
CCGTTCCATCCCATTCCCATCCCACCACCTTTTCC--GAGCAAGCAAAAGCAGCGAAGCGGA-CCAACCC--AATCCATC
TCATCTCCTCTACTCTGAATCGCGAATTAAACCCACCCGCGAATCCTCCGATTCTTTTTCTTCCTCTCGCGGCGCGAAGC
AACCA----ATC-AATGGCGGTGGCGTTGGGACCCGCGGCCACGTTCTCCGCCCGCCCCGCGGCGCCGGGCGCCGGCCGG
CCCTGCTCGTGCGCCGCCGCGGCCACCGGAGGTGCCAGGTTCCGCGGCGCCGACGGGAAGTGGTGGGCGCCGCTGCTCGG
GTGGTCGGGCCAGCCCGACTACATCGACGCCCAGCCGGCGCCCCTGC------CGGAGGAGGAGCGGGCTGCTGCT---G
GTGCTGCGGGCGCGAGGCGGTTCGGGGTGCTGACGGAGGAGAAGGCGCGGCAGCTGCGGGTGCGGATGATGGAGACGGAG
AGCTTCCACGACGCCATGTACCACTCCGCCATCGCCTCCCGCCTCGCCTCCGCCGCGCCCGACGGCGACGCCAAGCCGTA
GAGCGCGGAGCCGAGCAG------CTCAGGCTCAGCTCGCCGGCCGGAGCCATGGGAGACGCGCTGTCTGTGCACAGCTG
TACATACGCTTTCGTTTGTTCTGTCTGTCCTGTTGACCGTTACTGTACCCCATTACGTAGTCAAGAAGAGGCCGGTAATA
TTTAGGACAGGGCCCCTTCAGACCCTCCTTCCTGAACTTGATTATTCCATGGAGATGGGACTGCTTACTTAATCTTACTA
GTAGTTCTGGAGCAAAACTAGCTAGCAGTAGCACCTGA---ATGATGAATGTACAAAAATAATTTGGTTGTGCTGATGAT
TTAAGTTTCGGTTTGCTCATCAGTGTTTTACTTTTACTGCAAGGTG-TGGTTACGCTGAATCCAACTCC---GCGGAATG
ACAGTCGATTGTCAAATTCAGATGCTCGCGAGCTGCAAAAATGACCACTGATTGATGTTTCTCCGGTCACTGTGGATTGC
ATCAACTGCAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GTCGTCTTCACCAATAATTAACCCATGGGACTTTGCGTCCCTGT
CGACCCCCTCCTGATAAGTAA----TCCC---------------------------------------------------
---------------------------------------------------------------AGTAGTTTATTATAAAG
AGGATTAACACATCCAACCTCATCGCCATTTGATTCAACTCTGTGTCGTACGCTGCCGGTCCGCCATTGGCCGGCTTGAG
AGACCGACGCCGACCTCTGCCTTTGATCCGATCTGATCCGATCCATGCTAGATTAGATATC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>chr3D_851
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CCATCCCACCACCTTTTTTCTGAGCAAGCAAAAGCAGCGAAGCGGA-CGAAAACAAAATCCATC
TCATCTCCTCTACTCTGAATTGCGAATTAAACCCACCCGTAAACCCTCCGATTCTTCTTCTTCCTCTCGCGGCGCGAAGC
AACCA----ATC-AATGGCGGTGGCGTCGGGGCCCGCGGCCACGTTCTCCGCCCGCCCCGCGGCGCCGGGCGCCGGCCGG
CTCTGCTCGTGCGCTGCCGCGGCCACCGGCGGGGCGAGGTTCCGCGGCGCCGACGGGAAGTGGTGGGCACCGCTGCTGGG
TTGGTCGGGCCAGCCCGACTACATCGACGCTCAGCCGGCGC------------CGGAGGAGGAGCGAGCTGCTGGT---G
---CAGCAGGGGCGAGGCGGTTCGGGGTGCTGACGGAGGAGAAGGCGCGGCAGCTGCGGATGCGGATGATGGAGACGGAG
AGCTTCCACGACGCCATGTACCACTCCGCCATCGCCTCCCGCCTCGCCTCCGCCGCGCGCGACGGCGACGCCAAGCCGTA
GAGCG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>SNPs
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S---------S-SSS-----------------------S-----SSSSS-
--------S-------SS-SSS-SS--------------------------S--SSS-------------S-S--S----
-------SSSSS----------------------SSSSSSS---------------------------------------
---------------S---------------------S---------------------S--S-----------------
-------S------------------------------------------------S-----------------------
------------S-------------------------------------------------------------------
----S---------S-----------------------------------------------------------------
---------------S----------------------------------S-S----------------------SSSS-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------SSSSSS--------------------------------------------------------
--------------------S---------S-----------------S-------------------------------
----------S---------------------------------------------------------------------
---------S----------------------------------------------------------------------
--S-----------------------------------------------------------------SSSS--------
--------------------------------S-----------S-------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-S-----
--------------------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
------------------------S------------------------S------------------------------
------------------------------S------------------------------SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS
>forward_671
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------GCGAAGTTGCGGAACATCTC-------------------------------------------------
--------------------------------------------------------------------------------
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--------------
>reverse_2836
--------------------------------------------------------------------------------
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-----------------------------------TGTCTTGCTAGGCTGTGAGC-------------------------
--------------
