>input_sequence_81789
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---------------------------------------------------------------ATGGCATACCATGTTGA
AAGGACCTGCAGCTCCCCTGTCACTGGCCAATGCCGTAAGAGTTCTCGTGTTCATGCTTCAACTTTCGCATAATTCCATC
GCTTATTTTT-TTAGTCTGATATAACCGTA---------------GGTTAAACCACAT--TAATCATTCATTGTTACTGT
GCATGCACAACAGCGGGCAAGTTGATCTGGCCAGAGTTGTTGGGCAGGAAGGGCAAGGAGGCAAAAGATGTGATTGAGAA
AGAGAGGCCTTCCACCGATGCGATTTACGTTCCCCAAGATGCCGTTGTTACCGGTGACTACTGTTGCAATCGCGTTAGGA
TCTTTGTGGCTGCCACGCCCAATGGTGACTATGCAAACGCCAAGGTGATTGCGGTTCCAAGAGTTGGGTGA---------
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>chr7A_1_TraesCS7A01G227600
AACCACAATCTTTCTTTTAGTTATTCCACCGGTTTACCCATAATCCTTTTTTAATTAGCCACATCCGTTTAAATATTTTA
TTTAAGTCCACAATCCTTTCTTTAATTAGCTCATTTGCTTAAACATGAGGACTGCCACTCATATACTTAGAGCGAGTTGG
AATTTAGTAAATGTGAATGACGCATAGGTTGTTGCATCGAAGATCCAGATAGGAGGTCATGTTTAAATTCTCACAATGTT
AATTTATTTTGACCTAATTATTTTTTGCGGACTCTATGAAGCCCATAAAAGACCCATCGAAATGAAAAGGACTGAACCAA
ACCAAGAATATATATTCCCTTTAATAGTTGGACTGAACCAAACCAAGAATACCTATTCCCTTTAATAGTAGGTATAGAAA
ATGAAATCACGCCGATAATGCGCCATAAACCTTAATATTCATTTTCATTTATCCCTATAACACATCCAAAGTTTTCGAGA
AGCTCGGCTACAAAATTTCTTCAATCCTGCCCCCTTCTTCTTGCATCGGAGTATGCTTCAAATCCACG--ATGATACATT
GCGAGCGCGAGATCCATGATTGCCCGAAGGGTATGCAAATGCACCGAGTCAAATCAAGAGAATAAACA------------
--------AATAGATCCTGGCCATAAAACGTGTTAAATAATAACCAAGGATTGATGCTACTAAAAATTAACTAATTTTCA
AATTCATGAATAACAATTACAAGTAATTTTATAATTCAATACTAAATCAGCTCGCACGAGCCTATTTTTAGTCACCTCAA
TCCTCGGCAATTTTAATACACCATTATAGCCATTATGTATATTTAC-TGTCTTAATTTGATTTAGTAAGTGTGTCTGGCC
AACGGAAATTGCCTCGCTCTATTGTGATGAATGACACAATAGTTGTAATGCATTAACGAGTCATTTAATTACAAGTTTTG
CATATAAATACACAATTGTACCCGGCCGTCATCCTCCACACAGCAGAAGAAAGTTTAGCAACCATGGCATACCATGTTGA
AAGGACCTGCAGCTCCCCTGTCACTGGCCAATGCCGTAAGAGTTCTCGTGTTCATGCTTCAACTTTCGCATAATTCCATC
GCTTATTTTT-TTAGTCTGATATAACCGTA---------------GGTTAAACCACAT--TAATCATTCATTGTTACTGT
GCATGCACAACAGCGGGCAAGTTGATCTGGCCAGAGTTGTTGGGCAGGAAGGGCAAGGAGGCAAAAGATGTGATTGAGAA
AGAGAGGCCTTCCACCGATGCGATTTACGTTCCCCAAGATGCCGTTGTTACCGGTGACTACTGTTGCAATCGCGTTAGGA
TCTTTGTGGCTGCCACGCCCAATGGTGACTATGCAAACGCCAAGGTGATTGCGGTTCCAAGAGTTGGGTGATTCACATGC
TATATGACCAGAGGATGCATCAACGGATGGCATGAAATATATCTTAGTAATTTCATGTTATGATAAATAAAAGTAATCCT
AATGGCCTTATATTAATAAAGCATCCTCTCTTTTGCTAGGATCTTGTAAGAAGATGTTTTT----TTCTTCCTTTTATGC
TCTAATTAATTATAAAATGTT-CCTATAAGTTTTAAGATAATAAGGGTGATACAGTAGAACAACCAAAATCTCATACAAA
AAATCTCACATCGTTTATACATAGTAAAGTTAGAGATCAATTCACGACGGTAAGAAAAGGCAATCAAATGAACGAAGAGT
GAAAATTTCCATTAATGAAATGAATGGATCAATCAACATATGGTCAAGTAATCCAGTTTCAAACCAAATAAAAGATACAT
GTATCACAAAAACGAAAACCGACACACATCAAATTAACGAAATACAGGAAGCACCAGCAGCATTTGTCCTCTTCATCCTC
CTCCAGGTGCACGTATCTTCCTTCGCTTACTTACTGCATGTAGTAAGACAAGAAGGAGAGTACGGAGGCGCCGAGCACCG
CGCCGACGGCCGGGAAGGCGCCGGTTGCTGCGGAGGCTCCCGCCGCCGGGGCTCCCGCCAGGGCTCCCGCCGGGGCAAGG
GCCGGACCATCGGCAGCGAGGGCAACGGTCGCCGATGCGGCGATGAGGACGGCGCAGGCAATCTTCTTCATCTCCATGAC
CTGAGAAAGTCGAAAGAGGGAGATGAGGAAGCACAAGGGCTTATTGGCAAAGCTGGGATTGCTTATTCGTGCCCTTGATG
CTTGCGTGGGGAAGAATGGGGGAATGGAGGGGGAGTCTTATAGGCCGGATTAGCAGGCTAGCTAATCTTGGGGGTCAGAG
GTTGAAGAAGAGTTGGTGGTGGGCGGCATGTCGAGGCCCCTGTCTACGTACGTGC-GTGCATGTACGTGATATGAGTGGG
CGGCAAGGTTGTTGGAGTCTTGGAGATGAACGAGTCT
>chr7B_398
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-----------------------------------------------------------------------------AAA
AGGAAATCACATTGATAATGCACCATAAACCTTAATATTCATTTTCATTTATCCCTATAACACATCCAAAGTTTTCGAGA
AGCTCGGCTACAAAACTTCTTCAATCATGCTCTTTTTTTCTTGCATCGGGGTATGCTTCAAACCCATTATATGATACATT
GGGAGCGCGAGATGCATGATTGCCCGAAGGGTATGCAAATGCACCGAGTCAAATCAAGAGAATAAACA------------
--------AATAGATCCTGGCCATAAAACGTGTTAAATAATAACCAAGCATTGATG---CTAAAAATTAACTAATTTTCA
AATTCATGAATAACAATTGCAAGTGATTTTATAACTCAATTCTAAATCAGCTCGCACTAGCCTATTTTTAGTCACCATAA
TCCTCGGTAATTTTAATACACCATTGTAGCCATTATGTATATTTAC-TCTCTTAATTTGATTTAGTAAGTGTGTCTGGCC
AACGGAAATTGCCTGGCTGTATTGCGATGAATGAGACAATATTTGTAATGCATTAACGAGTCACTTAATTACAAGTTTTG
CATATAAATACACGATTGTACCCGGCCGTCATCTTCCACACAACAGAAGAAAGTTTAGCAACCATGGCATACCATGTTGA
AAGGACCTGCAGCTCCCCTGTCACTGGCCAATGCCGTAAGAGTTCTTGTCTTCATGCTTCAACTTTCGCATAATTCCATC
GCTTATTTTTTTTACTCTGATATAACCGTACTGTTTTTGTTAAGAGGTTAAACCACATTGTAATATTTCATTGTTACTGT
GCATGCACAACAGCGGGCAAGTTGATCTGGCCAGAGTTGTTGGGCAGGAAGGGCAAGGAGGCAAAAGATGTGATTGAGAA
AGAGAGACCTTCCACCGATGCGATTTACGTTCCCCAAGATGCCGTTGTTACCGGTGACTACTGTTGCAATCGCGTTAGGA
TCTTCGTGGCTGCCACGCCCAATGGTGACTATGCAAACGCCAAGGTGATTGCGGTTCCAAGAGTTGGGTGATTCACATGC
TATATGATCAGAGAATGCATCAACTGATGGCATGAAATATATCTTAGTAGTTTCATGTTATGATAAATAAAAGTAAT---
---GGCCTTATATTAATAAAGCATTCTCTCTTTTGCTAGGATCTTGTAAGCAGATGTTTTTCTTCTTCTTCCTTTTATGC
TCTAATTAATTATAAAATGTCCCCTATAAGTTTTAAGATAATAAAGGTGATACAGTAGAACAACC--------------A
AAATCTCACATCGTTTACATAGGATAAAATTAGAGATCAATTCACGACGGTAAGAAAAGGCAATCAAATGAATGAAGAGT
GAAAAATTCCATTAATGAAATGAATGGATCAATCAACATATGGTCAAGTGATCCAGTTCCAAACCAAATCAAAGGTACAT
GTATCACAAAAACGAAAAC----ACACATCAAATTAACGAAATACAGGAAGCACCAGCAGCATTTGTCCTCTTCATCCTC
CTCCAGGTGCACGTATCTTCCTTCGCCTACTTACTGCATGTAGTAAGCAAAGAAGGAGAGTACGGAGGCGCCGAGCACCG
CGCCGACGGCCGGAAAGGCGCCGGTTGCTGCGGAGGCTCCCGCCGCCGGGGCTCCCGCCAGGCCTCCTGCCGGGGCAAGG
GCCGGACCATCGGCGGCGAGGGCAACGGTCGCCGATGCGGCGATGAGGACGGCGCAGGCAATCTTCTTCATCTCCATGAC
CTGAGAAAGTCGAAAGAGGGAGATGAGGAAGAACAAGGGCTTATTGGCAAAGCTGGGATTGCTTATTCGTGCCCTTGATG
CTTGCGTGGGGAAGAAGGGGGGAATGGAGGGGGGGTCTTATAGCCCGGATTAGCAGGCTAGCTAATCTCGGGGGTCAGAG
GTTGAAGAAGAGTTGGTGGTGGGCAGCATGTCGAGGCCTCTCTC----TAACGTGGGTGCATGTACGTGATACGAGTGGG
CGGCAAGGTTGTTGGAG--------------------
>chr7D_398
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-----------------------------------------------------------------------------AAA
AGGAAATCACGTTGATAATGCACCATAAACCTTAGTATTCATTTTCATTTATCCCTATAACACATCCAAAGTTTTCGAGA
AGCTCGGCTACAAAACTTTTTCAATCCTGCCCTCTTCCTCTTGCATCGGATTATGCTTCAAATCCATG--ATGATACATT
GCGAGCGCGAGACCCATGATTGCCCAAAGGATATGCAAATGCACCGAGTCAAATCAAGAGAATAAACACACAAAAAAAAG
AATAAACAAATAGATCCTGGACATAAAACGTGTTAAATAATAATCAAGAATTGATGCTACTAAAAAATAACTAATTTTCA
AATTCATGAATAAGAGCTTCAAGTAATTTTATAATTCAATACTAAATCAGCTCGCACTAGCCTATCTTTAGTCACCTCGA
TCCTCGGTAATTTTAATACACCATTATACCCATTATGTATATTTACATCTCTTAATTTGATTTAGTAAGTGTGTCTGGCC
AACGGAAATTGCCTGGCTGTATTGTGATGAATGAGACAATATTTGTAATGCATTAACGAGTCACTTAATTACTAGTTTTG
CATATAAATACTCGATTGTACCCGCCGTC--TCTTCCACACAACAGAAGAAAGTTTAGCAACCATGTCATACCATGTTGA
AAGGACGTGCAGCTCCCCTGTCACTGGCCAATGCCGTAAGAGTTCTTGTGTTCATGCTTCAACTTTCGCATAATTCCATC
GCTTATTTTTTTTAGTCTGATATGACCGTACTGTTTTTGTTAAGGTGTTAAACCACATTGTAATAATCCATTGTTGCTGT
GCATGCACAACAGCGGGCAAGTTGATCTGGCCAGAGTTGTTGGGCAGGAAGGGCAAGGAGGCAAAAGATGTGATTGAGAA
AGAGAGACCTTCCACCGATGCCATTTACGTTCCCCAAGATGCCGTTGTTACCGGTGACTACTGTTGCAATCGCGTTAGGA
TCTTCGTGGCTGCCACGCCCAATGGTGACTATGCAAACGCCAAGGTGATTGCGGTTCCAAGAGTTGGGTGATTCACATGC
TATATGATCAGAGGATGCATCAACTGATGGCATGAAATATATCTTAGTAGATTCATGTTATGAGAAATAAAAGTAAT---
---GGCCTTATATTAATAAAGCATTCTCTCTTTTGTTAGGATCTTGTAAGCAGATGTT----TTCTTCTTCCTTTTATGC
TCTA-TTAATTATAAAATGTCCCCTATAAGTTTTAGGATAAAAAATGTGATACAGTAGAACAACC--------------A
AAATCTCACATCGTTTACATAGTAT-AAGTTAGAGGTCAATTCACGACGGTAAGA-AAGGCAATCAAATGAATGAAGAGT
GAAATTTTCCATTAATGAAATAAATGGATCAATCAACATATGGTCAAGTAATCCAGCTTCAAACCAAATCAAAGGTACAT
GTATCACAAAAACGAAAAC----ACACATCAAATTAACGAAATACAGGAAGCACCAGCAGCATTTGTCCTCTTCATCCTC
CTCCAGGTGCACGTATCTTCCTTCGCCTACTTACTGCATGTAGTAAGCAAAGAAGGAGAGTACGGAGGCGCCGAGCACTG
CGCCGACGGCCGGGAAGGCGCCGGTTGCTGCGGATGCTCCCGCCGCCGGGGCTCCCGCCAGGGTTCCCGCCGGGGCAAGG
GCCGGACCATCGGCGGCGAGGGCAACGGTCGCCGATGCGGCGATGAGGACGGCGCAGGCAATCTTCTTCATCTCCATGAC
CTGAGAAAGTCGAAAGAGGGAGATGAGGAAGAACAAGGGCTTATTGGCAAAGCTGGGATTGCTTATTCGTGCCCTTGATG
CTTGCGTGGGGAAGAAGGGGGGAATGGAGGGGGCGTCTTATAGCCCGGGTTAGCAGGCTAGCTAATCTGGGGGATCGGAG
GTTGAAGAAGAGTTGGTGGTGGGCGGCATGTCGAGGCCTCTCTC----TACGTGC-GTGCATGTATGTGATATGAGTGGG
CGGCAAGGTTGTTGGAG--------------------
>chr7A_609
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--------------------------------------------------AAATCAAGAAAATAAACA------------
--------AATAGATCCTAGGCATAAAACGTGTTAAATAATAACCAAGGATTGATGCTACTAAAAATTAACTAATTTTCA
AATTCATGAATAACAATTGCAAGTAATTTTATAATTCAATACTAAATCAGCTCGCACTATCCTATTTTTAGTCACCTCAA
TCCTTGGTAATTTTAATACACCATTGTACCCATTATGTATATTTAC-TCTCTTAATTTGATTTAGTAAGTGTGTCTGGCC
AACGGAAATTGCATGGTTGTATTGTGATGAACGAGACAATATTTGTAATGCATTAACGAGTCACTTAATTACAAGTTTTG
CATATAAATACACGATTGTACCCGTCCGTCATCTTCCACACAACAGAAAAAAGTTTAGCAACCATGGCATACCATGTTGA
AAGGACCTGCAGCTCCCCTGTCACTGGCCAATGCCATAAGAGTTCTTGTGTTCATGCTTCAAGTTTCGCATAAATCCATC
ACTTTATTTTTTTAGTCTTACATAACCATACTGTTTGTGTTCAAAGGTTAAACCACATTGTAATAATTCATTGTTACTGT
GCATGCACAACAACGGGCAAGTTGATCTGGCCAGAGTTGTTGGGCAGGAAGGGCAAGGAGGCAAAAGATGTGATTGAGAA
AGAGAGACCTTCCACCGATGCGATTTACGTTCCCCAAGATGCAGTTGTTACTGGTGACTACTGTTGCAATCGCGTTAGGA
TCTTCGTGGCCGCCACGCCCAATGGTGACTATGCAAACGCCAAGGTGATTGCGGTTCCAAGAGTTGGGTGATTCACATGC
TATATGATCAGAGGATGCATCAACTGATGGCATGAAATATATCTTAGTAGTTTCATGTTATGGGAAATAAAAGTAAT---
---GGCCTTATATTAATAAAGCATTCTCTCTTTTGCTAGGATCTTGCAAGCAGATTTGTTCC--------CCTTTTATGC
TCTATTTAATTATAAAATGTCTCCTAT-----------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
-S---------SS--------S----------------------------------------------------------
---------------S----------------S---------------------------------S-------------
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------------------S--------------------------------------S----------------------
-------S----------------------------------------S-------------------------------
--------------S---S---------------S------S---------------------S----------------
-------------S-------------------S--------S-------------------------------------
----------------------------------------------S---------------------------------
----------------------------------------------------------------S---------------
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------S-------------------------------------------------------------------------
----S---------------------------------------------------------------------------
-------S----------------S------------------------S---------------------------SSS
SSS---------------------S-------------------------S-----------------------------
--------------------S-----------------------S--------------------SSSSSSSSSSSSSS-
-----------------S-S-SSS------------------------------------------------S-------
---------------------------------------------------------------------S----S-----
-------------------SSSS---------------------------------------------------------
--------------------------S--------------------SS-------------------------------
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--------------S-----------------------------------------------------------------
-------------------------------S------------------------------------------------
----------------S----------------S---------S------------------------S-----------
--------------------------------------S--S--SSSS--------------------------------
-----------------SSSSSSSSSSSSSSSSSSSS
>forward_284
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------------------------TTGCGGACTCTATGAAGCCC------------------------------------
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>reverse_2309
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--------------------------------------------------------------------TGGGGGTCAGAG
GTTGAAGA------------------------------------------------------------------------
-------------------------------------
