>input_sequence_81786
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------------------------------------------------------------------ATGGGTGTGGGTTC
CAGGAAGAAGCACTGCAGCGGCAGCG---TTGTGTCCTGTGTAGTCCTATGCCTAGCCCTGCTCGTCGTCGGGGCGACCG
CCAAGAAGAGCATACGCCAGTGCATCGCTGAGTGCACTGGCAGTTCGAATCCAAAAGGCTGCATGACATATTGCATCAGG
GAAGCCGTGGTGCTGGTGGCCCATGGAGAGGCAAGAGGAGTAGGAGGAGAAGGAATTGGGCTGCTGGCGACGCCGGTGGA
GCGTGCCAGCCAGGAGGAAGAAGAAGAGAAGAGGAAGCAAGAGGCCGCCGGCGCCGACCAACTGACTTTCGACCCGTGCG
ATATGTGCCATCCAGATGACTACTGGTACGAAATGTGCATGAGGGTATGTCATCGTTAG---------------------
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>chr6D_1_TraesCS6D01G011900
GTAAACCCGATTAATATGAATAAATCTATATTTTTATCCTTAATGACAATAATGCAAATACGTGTCTTGTCCCTTTCTGT
CAGCGGGATATAAAGCACCACAAGATCGAACCCGTTACAAAGCACCTCTCACATTGCAAGATAAATCAATCTAGTTGGCC
AAACTAAACCGATACATCGGAGAGAAATGAAAAGTTATAATAATCATGCATAAAAGAGTTCAGAGAAGACTCAAATAATA
TTCATAGATAAGATAATCATAAACCCATAATTCATCGGATCTCAACAAACACAACACAAAAGAGGATTACATCTTTTCCT
TGAAGCAGTGCTATTTCCTTGACCTTGTGCTTCTTGGGGAAGGTGCATCCAAGATAAAATCACAAACAGCAAAGAATGGG
AGCTCTGGTACGCGCTGATCGATCGCATACAAATACTTAATCTAGGAAGTATACCAACTACTAGTAGTTGATTTGGAAGC
AAGCGGATACACTCCACTTCATACATAAATACTAGCTAGTTGAATGCATCTTTTCTGCACAGTTTGTCCCGACCCTAACG
GAGAGGGTGCGTGGCAGTCGCGTGTCAGTAAAATCAAACATCAATGGAAGCTCGTGCATTGCACGCCCGCAGATGTCGGA
TCGATACCATTCGCGTGGTGAGCCAGTACATGTGGTGGCCATTAGCAGGAAAAGACAGAAGCAAGTAATTACGTGTAA--
-GGACCTACTCCTAGATGCTTCCTTAATCTAGTAATTGCTGGTACAGCATACATACATAGTTAATTTGGAATCACATGCA
TCTGCTGCAAGCTGTCTCCCTAACAGCACGCAAGTGGATCGTCAGATCAGATCTGATCCCAAGCTATTACATGGACTAGA
TTCCTCAGAAAAGGCCACCAGCATCTT-------GAACTCTTTATATGTGTGCGTGTCCCCGTCTCTTCGATCCATCCAT
CCATCGTTGTTAGCAGCAACGTACTTACAGCTAATTAGTTCAAGCCAGCC----------------ATGGGTGTGGGTTC
CAGGAAGAAGCACTGCAGCGGCAGCG---TTGTGTCCTGTGTAGTCCTATGCCTAGCCCTGCTCGTCGTCGGGGCGACCG
CCAAGAAGAGCATACGCCAGTGCATCGCTGAGTGCACTGGCAGTTCGAATCCAAAAGGCTGCATGACATATTGCATCAGG
GAAGCCGTGGTGCTGGTGGCCCATGGAGAGGCAAGAGGAGTAGGAGGAGAAGGAATTGGGCTGCTGGCGACGCCGGTGGA
GCGTGCCAGCCAGGAGGAAGAAGAAGAGAAGAGGAAGCAAGAGGCCGCCGGCGCCGACCAACTGACTTTCGACCCGTGCG
ATATGTGCCATCCAGATGACTACTGGTACGAAATGTGCATGAGGGTATGTCATCGTTAGGGCCACGCGGCGGCCCACGCC
CTCCTTCTGCCCATGGACAGGGGAAAAGGTAGTAAATTGTCGTTGAGAAGTTGATGCGTCCTCCTACATGGACCTTTCGC
AACTCGT-----------GGTTATTATCTTGTTGTTACCTATAGTTTGTTCTTTCCGTTTGTAGGTCTGAGCACACAAGC
TTGTGTGTGTTTCCCTTTCGGAATAAGAGCAGCTGCAGTTGCTATATATGCACCTGCGCTATGTTATG-------GGTGT
GTTTGTATTTCATTTCCTGCACAATATAATGTTGTTGCTACTACTCTCTCCGTCTCCAATAATATAAGATGGTGACATAG
GGAGTAGTTGCTACTGGTTGCTTTCGTTATAAAGCATGGCCATGATGATGGCTCTCCTAGTATGTTCATGTTGGCTCAAA
ATGATGGCCCTACAGGTTGCTCAGTGAGCCTCGATTTGTTTGTAATTAATTTCCTGCATACTGTACTGTTGTTGTTATTT
CTTGCTACTGGTTGCTTTCATTATAAAGCAGGGCCGTCATCAAGCTCTATTCTCTTACTAGATCATGATGTAGAGTCATT
TAATTTTTATAAACATATATAGTATGTGGTAAGGATCAATTATATCATTAAAACATTATGTATTGTCCAATTATGTACTC
CATCCGTCCCAGAATGTAAGATCAGTTTTGACACTATGATAATGTCAAAATGATTATCAATTTTTGGACGGATGGAAAAG
AACTGGTTGGAAACTCCAAAAATAAGAAGAAAAACTTGTGTGTCAACTGTATGTCGTGCAGTTACTGTTCAAAATGGATG
GAAAGTTGTAGCGCTTATTCCTGGATATTTGATGAAGACCATTATTAAGTACAATTTGCAAGTGTGTGTTTCTAGCCAAG
CAATTGCATAGCACAAGTTTTGTTATCCAACATTTCAGTCAAGCATGAAATTAATCAGGCAAGAATTGAAGTCCTAGATG
CCATCTCCTCGACATGATTAACCATAGGCTGCCCACG
>chr6B_306
ATTAAC--------------------------------------------------------------------------
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----------------------------------------------------------------------ATCTTTACCT
TGAAGCAGAGCTATTTACTTGACCTCGTTCTTCTAGTGGAGGCTCCATCCAAGGCAAAATCACAAATAACAAACAAGGGG
AGCTCTGGTTGGCGCTGATCGATCGCACACGAATACTTAATCTAGCAAGTATACCAACTACTAGTAGTT-ATTTGGATGC
AAGTGGGTATACTCCACTTCATACATAAATACTTGCAAGTTGATTTCATC--TTCTGCACACTTTGTCCATACCCTAACG
GAGAGGATGCATGGCAGTCGTGTGTCAGTAAAATCAAACATCAATGGAAGCTCGTGCATTGCAGGCCCGCAAATGTCGGA
TCGATACATCTCGCGTGGTGGGCCTCTACATGTGGTGGCCATTAGCAGGAAGCGACAGAAGCAAGTAATTACGTGTAATA
AGGACCTACTCCCAGATGCTCCCTTAATCTGGTC-TTGCTGGTACAACATACATACATAGTTAAATTGGTATCACATGCA
TCTGCTGCAAGCTGTCTCCCTAACAACACGCAAGTGGATCATCAGATCATATCTGATCCCAAGCTATTACATGGAC----
-----------------------TCTT-------GAACTCTTTATATGTGTGCGTGTCCCAGTCTCTTCAATCCATCCAT
CAATCGTTGTTAGAAGCAACGTTCTT------------------------------------------------------
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>chr6B_306
ATTAAC--------------------------------------------------------------------------
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----------------------------------------------------------------------ATCTTTACCT
TGAAGCAGAGCTATTTACTTGACCTCGTTCTTCTAGTGGAGGCTCCATCCAAGGCAAAATCACAAATAACAAACAAGGGG
AGCTCTGGTTGGCGCTGATCGATCGCACACGAATACTTAATCTAGCAAGTATACCAACTACTAGTAGTT-ATTTGGATGC
AAGTGGGTATACTCCACTTCATACATAAATACTTGCAAGTTGATTTCATC--TTCTGCACACTTTGTCCATACCCTAACG
GAGAGGATGCATGGCAGTCGTGTGTCAGTAAAATCAAACATCAATGGAAGCTCGTGCATTGCAGGCCCGCAAATGTCGGA
TCGATACATCTCGCGTGGTGGGCCTCTACATGTGGTGGCCATTAGCAGGAAGCGACAGAAGCAAGTAATTACGTGTAATA
AGGACCTACTCCCAGATGCTCCCTTAATCTGGTC-TTGCTGGTACAACATACATACATAGTTAAATTGGTATCACATGCA
TCTGCTGCAAGCTGTCTCCCTAACAACACGCAAGTGGATCATCAGATCATATCTGATCCCAAGCTATTACATGGAC----
-----------------------TCTT-------GAACTCTTTATATGTGTGCGTGTCCCAGTCTCTTCAATCCATCCAT
CAATCGTTGTTAGAAGCAACGTTCTT------------------------------------------------------
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>chr6A_626
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-----------------------------------------------------------------CCCGCAGATGTCGGA
TCGATACCTCTGGCGTGGTGAGCCTGTACATGTGGTTGCCATTAGCAGGAAGAGACAGAAGCAAGTAATTACGTGTAA--
-GTACCTACTCCTAGATGCTTCCTTAATTTGGTC-TTGCTGATACAGCATACATACATAGTAAATTTGGAATCACATGCA
TCTGCTGCAAGCTGTCTCCCTAATAGCATGTAAGTGGATCGTCAGATCAGATCTGATCCCGAGCTACCACATGGAC----
-----------------------TAGATTCCTCAGAACTCTTTATATGTGTGCGTCTCCCCGTCTCTTCAATCCATCCAT
CCATCGTTGTTAGCAGCAACGTACTTACAGCTTATTAGTTCAAGCCAGCCAGCCATCAAGCTAGCCATGGGCGTGGGTTC
CAGGAATAAGTGCTGCAGCGGCAGCGTCTTTGTGTCCTGTGTAGTCCTATGCCTAGCTCTGCTCGTCGTCGGGGCAACGG
CTAAGAAGAGTATACGCCAGTGCATCGCTGAGTGCACTGGCAGTTTGAATCCCAAAGGCTGCCTGACATATTGCATTAGG
GAAGCCGTGGTGCTGGCGGCCCATGGAGAGGCAAGAGGAGTAGGAGGAGAAGGAATTGGGCTGCTGGCGATGCCGGTGGG
GCGCGCCGGACAGGAGGAAGAAGAAGAGAAGAGGAAGCAAGAGGACACCGCCGCCGACCACCTGACTTTTGACCCGTGCG
ATATGTGCCATCCACAGGACTACTGGTACGAAATGTGCATGAGAGTATGTA---GTTAGGGCCTCGCGGCGGCCCAAGCC
CTCCTTCTGCCCATGGACTGGGGAAAAGGTATTAATTTTTCATCGAAGAGTTGATGCGTCTTCCTACACGGACCTTTCTC
AAGTCGATCGTTGCGAAAGGTTATTATCTTGTTGTTACCTATGGTTTGTTCTTTCCGTTTCCATGTCTGAGCACACAACC
TTGTGTGTGTTTCCCTTTCGGAATAAGAGCAGCTGCACTTGTTT----TGCACCTGCGCTATGTTACGGCTTGATGGTGT
GTTTGTATTTCATTTCCTTC------------------------------------------------------------
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-----------------------------------------------------------ACTATAATGTTCTTGTTATTA
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>SNPs
S-S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---
--------S-------S--------S--S-----S-S---S-S-S--------SS-----------S-S----S--S---
---------SS----------------S--S--------------S-----------------------S-------S--
---S--S--S-----------------------S--S------S-S----SS---------S-------SS---------
------S---S---------S------------------------------------------S----------------
--------SS--------------S--------------------------S----------------------------
------------------------------S--SS---------------------------------------------
----------------------------------------------------------------------------SSSS
SSSSSSSSSSSSSSSSSSSSSSS----------------------------------------------S----------
--------------------------------S--------------------------------------S--------
------S---SS---------------------------------------------S-----------------S--S-
-S--------S----------------------------------S------S---------S-------------S---
----------------S-----------------------------------------------------S--------S
---S---S-S----------------------------------S-S---S---------S--------S----------
--------------S-S--------------------------S------SSSS---------S------------S---
------------------S------------S---S--S--S-S--SS------------S-------S---------S-
--S---S-----------------------------------S-----------------SS-S--------------S-
-------------------------------------S---S-SSSSS------------------S-------------
------------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--S----S--------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_126
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--------------------------CGAACCCGTTACAAAGCACC----------------------------------
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>reverse_1832
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-----------------------------------------------------------------------TGGCTCAAA
ATGATGGCCCT---------------------------------------------------------------------
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