>input_sequence_81784
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---------------------------------------------------ATGAAGCGGAACCAAGAAGAAGCGCGCGG
CCACCTCCTCGCCGGGACCGCCTCCCGCCACGACGCTGCGGACGCGGAGGCGCCGGCGCCGATCACCAAGGGATGCGCGA
CGTTCTGGGTGGGCGCGGAGGAGGAGGGCGAGGCGCCGCGGCGGTTCGCGGTGCCGGTGGCGCTGCTCTGCCACCCCCTG
ATCCTGGAGCTGCTCGGGGAGGCGCGGGACAAGTACGGGTACGCGCACGAAGGCGCCATCGTCGTCCCCTGCGGCATCGA
GCGGTTCCAGAAGGCGGTCGACGCGGCGAGGGCCCAAGAACGGCACCGTCACCACCACCATCATCACTTCAGTCTTCCTC
ACCTTGCCGGGTGCTTTAGGCCCTCGCACGCTGTTGCTTAG---------------------------------------
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>chr6A_1_TraesCS6A01G226200
TCGGTATACCATTGCCTTCCTAACTATCCACCCCGTGTTCATTAGGAGTTACTCCTTCCGTTCGGAAATACTTGTCATCA
AAATAGACAAAAAAGATGTATCTAGAACTAAAATACATCTAGATACATCTCCTTTTATTCATTTTGATGACAAGTATTTC
CGGACGAAGGGAGTACTTTTTTTTGAGCTTGCTAGGAGTTACTTGTGTTAATAAAGAGTAAAATAAGATTATGTGTACCT
AGTCCTGGCCATCTCAGGCCCGGCCCTGTCGGCCCACCCAGGCCCGGCCCTAAAATCCAAGGCCTAGGCCCGATGGGCTT
GTCCGTGGGCCGGGTTTGGGCCTGAGTTTTGAGCCAATCAGCAGAGCCTGGACGGGCTTGAGCTTGGCATATTGGCATTT
TAAGGAAGAGGCCCGGCCCACGGCCCTAAGCCCTAAGGGCTTTTTAGGGCTTTTTACGAGATGGGCCGGGCTTGGGCTTG
AAAAGTAGGCCCGCTGGTAGGGCCTGGGAGGGCCTAGGCCTCAGTCTTCTGCCATGGGCTTTTTTAGGCCCGGCCCAAGC
CCGGCCCGGCCGGCCCATGGCTAGATATATGTGTACCTAAGACGCGGTTCCAAGGAGAAGCTGATACGGAGGATCGAGGG
AGTGAAGACAGATCATAGGCCGGACGTGTTCCCGAAGGGTGCCAAGAACGGTCCAGATTAATCCCGCGGGAGT-------
---CG-CGTGATCCGAGTGGGTACCGACGCACCGACGACCTCCGCCGTGACGACTGATTCGTGAAGAAGTAAACCGAAAG
CGCGTCCATGCCGCCACCGGCATCAGCCATCACCAATTCAACGCCTGGCCGACTACTATATAAATCCATCGTCCGCTACA
CCGCAAACTCAAACCGGAAGAGAAGAGAGGAGACCTGCTATCGATTGATCGATCCCGCAGTCGAGTCATCGGGGGTTCGC
CCGCCACCGCGTTCGACGGCGAGCAAGAACCAGGAAGGAAGGCTTCGATCGATGAAGCGGAACCAAGAAGAAGCGCGCGG
CCACCTCCTCGCCGGGACCGCCTCCCGCCACGACGCTGCGGACGCGGAGGCGCCGGCGCCGATCACCAAGGGATGCGCGA
CGTTCTGGGTGGGCGCGGAGGAGGAGGGCGAGGCGCCGCGGCGGTTCGCGGTGCCGGTGGCGCTGCTCTGCCACCCCCTG
ATCCTGGAGCTGCTCGGGGAGGCGCGGGACAAGTACGGGTACGCGCACGAAGGCGCCATCGTCGTCCCCTGCGGCATCGA
GCGGTTCCAGAAGGCGGTCGACGCGGCGAGGGCCCAAGAACGGCACCGTCACCACCACCATCATCACTTCAGTCTTCCTC
ACCTTGCCGGGTGCTTTAGGCCCTCGCACGCTGTTGCTTAGGATCGTCAAGCCCGCGGCTTAGCGTCCAGTTTGCGCGTT
TTT-CTTGGTTTCTTGGTGTGGTGATCAAATTGGTAGGCATCCAACACCAAGAAGAAGCTCAGCACATGTAGCGTAGTTG
ATCGAGCTGCCCATGAAGAACGCAGATTCTATCTGTGACCGATCCATCATCGACGCAGATTCTATCTG------------
TGATTGATCCGCTGATCTGTACAGATTTTATTGTGTACATGACGAGAATTCCTTGTTGTTGCTTCAGATCGACGCGGTCC
GCTTTTCATGTGTTTTCTTGG----TTTATTGTTCTGGTGATCGAATTGACAGACACCCATGATCTAGAGAAAGCTTAGG
ACGTGCTAGCGTCTAGCTGGTCTAATTGCCAGTTTTTTGTGATCGATTGTTGGAGTCAAATCTCGCCAGATATTACTTGG
TCAAGC-TATTATCCGTCTGAAACTGTTCTATGTGAAAATTGAGAATTGAGATTGTTCGATTACCAAAGGCTTCACCTTG
GAATAC---TGGTCCTATTGGCTGACTCGACGTCCTCGATCATTCTATCAATTGCACCCTAATACAAATTGCTC------
---------------------------------------------------CCCGGATGACAATCTGATACATTTGGT-G
ACTCAAGTTTTT--------------------------------------------------------------------
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------------------------------------------------------------TAATGGCTCAAATTTGGGGT
TATATCCTTCGGCGCATCAGA---TGGCGCTTGAGAACTCACGAATAGTTGTATGCTTGGAAACGGCACAGCTAGATCAG
GCCTGAACCTGATTGCAGCTCACTAGTGTCCTGATTTTGTCCGCCGAGTGAAACTTTTTTGCTTTTTCACATGCTTTGTC
AGGCTTGTAGACCGGACTATCTGGTCAACCCATTTAA-------------------------------------------
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---------------------------GATACACATTCCATATCCGAAAGTTCTATTGTCAACTCA--------------
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----------ATAAAGTTTGCATGAGGTTCAC--AAAAAAAAGAGGTTTTCGTCCCCTACATTCTGAAAGTATGAGATGG
TCTAATTGTCATCGTTCAATTCTAGCTGTTGTGTAGGTTTCACCCACTAACTTCACAAGACAAATCA
>chr6D_170
GGAGTTAC------------------------------------------------------------------------
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------------------TTTTTTTATCTTGCTAGGAGTTACTTGTGTTAATAAAGAGTAAAATAAGATTAT--------
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------------------------------GTGTACCTAAGACCCGGTTCCAAGGAGAAACTGATACGGAAGATCGAGGG
AGTGAAGACAGATCATAGGCCGGACGTGTTCCGGAAGGGTGCGAAGAACGGTCCAGATTAATCC-GCGGGAGTCGCGTGG
GCGCG-CGTGATCAGAGTGAGTACCGACGCACCGACGACCTCCGCCGTGACGACTGATTCGTGAAGAAGTAAACCAAAAG
CGCGTCCATGCCGCCACCGGCATCAGCCATCACCAATTCAACGCCTGGCCGACTACTATATAAATCCATCGTCCGCTACC
CCACAAACTCAAACCGGAAGAGAAGAGAGGAGACCTGCTATCGATTGGTCGATCCCGCAGTCGAGTCATCGGGGGTTCGC
C----ACCGCGTTCGACGGCGAGCAAGAACCAGGAAGGAAGGCTTCGATCGATGAAGCGGCTCCAAGAAGAAGCGCGCGG
CCACCTCCTCGCGGGGACCGCCTCCCGCCACGACGCTGCGGACGCGGAGGCGCCGGCGCCGATCACCAAGGGATGCGCGA
CGTTCTGGGTGGGCGCGGAGGAGGAGGGCGAGTCGCGGCGGCGGTTCGCGGTGCCGGTGGCGCTGCTCGGGCACCCCCTG
ATCCTGGAGCTGCTCGGGGAGGCGCGGGACAAGTACGGGTACGCGCACGATGGCGCCATCGTCGTCCCCTGCGGCATCGA
GCGGTTCCAGAAGGCGGTCGACGCGGCGAGGGCCCAAGAACGGCACCGTCACCACCACCATCATCACTTCAGTCTTCCTC
ACCTTGCCGGGTGCTTTAGGCCCTCGCACGCTGTTGCTTAGGATCGACACGCCCGC-GCT-AGCGTCCAGTTTGCGCGTG
TTTTCTTGGTTTCTTGGTGTGGTGATCAAATTGGTAGGCATCCAACAC---------------CACATGTAGCGTAGTTG
ATCGAGCTGCCCATGAAGAACGCAGATTCTATCTGTGACCGATCCATCATCGACGGAGTAAAATTTTGTAGCCCCGACGA
TGATTGATCGGCTGATCTGTACAGATTTTATTGTGTACATGACGAGAATTCCATGTTGTTGCTTAAGATCGACGCGGTCC
GCTTTTCT--TCTTTTCTTGGTTTATTTATTGTTCTGGTGATCGAATTGACAGACACCCATGATCCAGAGGAAGCTTAGG
ACGTACTAGTGTCTAGCTGATCTAATTGCCAGTTTTTTGTGATCGATTGTTGGAGTCAAATCTCGCCAGATATTACTCGG
TCAAGC-TATTATCCGTCTGAAACTGTTCTATGTGAAAATTGAGAATTGTGATTGTTCGATCACGAAAGGCTTCACCTTG
GAATACTCGTGGTTCTATTGGCTGACTCGACGTCCTCGATCATTCTATCTATTGCCCCCTAATACGAATTGCTC------
---------------------------------------------------CCCGGATGACAATC----ACATTTCGT-G
ACTTCAGTTTTT--------------------------------------------------------------------
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------------------------------------------------------------TAATGGCTCAAATTTTGGGT
TATATCCTTCAAAGCATCAGAAGTTGGCGCTTCAGAACTCACGAATCGTTGTATGCTTGGAAACGGCACAGCTAGATCAG
GCCTGAACCTGATTGCAGGTCACTGGTGTCCTGATTTTGTCCGCCGAGTGGAACTTTTTTGCTTTTTCACATGCTTTGTC
AGGCTTGTAGA-----------------CCCACTTCA-------------------------------------------
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---------------------------GATACACATTCCATATCCGAAAGTTGTATTGTGAACTCA--------------
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----------ATAAAGTTTGCATGAGGTTCACAAAAAAAAAAGAGGTTTTCGTCCCCTACATTCTGAAAATATGAGATGG
TCTAATTGTCATCGTTCAATTCTAGCTCTTGTGTAGGTTTCACCCACTAACTTCATAAGACAAATC-
>chr6B_589
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----------------------------ATGTGTACCCAAGACCCGGTACCAAGGAGAAACTGATACGGAAGATCGAGGT
AGTGAAGACAGATCATAGGCCGGACGTGTTCCGGAAGGGTGCCAAGAACGGTCCAGATTAATCCCGCGGGAGTAGCGTGG
GCGCGACGTGATCCGAGTGGGTACCGACGCACCGACGACCTCCGCCGTGACGACTGATTCGTCAAGAAGTAAACCAAAAG
CGCGTCCGTGCCGCCACTGGCATCAGCCATCACCAATTCAACGCCTGGCCGACTACTATATAAATCGATCGTCCGCTACA
CCACAA-CTCAAACCGGAAGAGAAGAGAGGAGTCCTGCTATCGATTGATCGATCCCGGAGTCGAGTCATCCGGGGTTCGC
C----ACCGCGTTCGACGGCGAGCAAGAACCAGGAAGGAAGGCTTCGATCGATGAAGCGGCTCCAAGAAGAAGCGCGCGG
CCACCTCCTCGCGGGGACCGCCTCCCGCCACGACGCTGCGGACGCGGAGGCGCCGGCGCCGGTCACCAAGGGATGCGCGA
CGTTCTGGGTGGGGGCGGAGGAGGAGGGCGAGGCGCCGCGGCGGTTCGCGGTGCCGGTGGCGCTGCTCGGGCACCCCCTG
ATCCTGGAGCTGCTCGGGGAGGCGCGGGACAAGTACGGGTACGCGCACGAAGGCGCCATCGTCGTCCCCTGCGGCATCGA
GCGGTTCCAGAAGGCGGTCGACGCGGCGAGGGCCCAAGAACGGCACCGTCACCACCACCATCATCACTTCAGTCTTCCTC
ACCTTACCGGGTGCTTTAGGCCCTGGCACGCTGTTGCTTAGGATCGACACGCCCGCGGCT-AGCGTCCGGTTTGCGCGTG
TTTTATTGGTTTCTTGGTGTGGTGATCAAATTGGTCGGCATCCAACAC---------------CATATGTAGCGTAGTTG
ATCGAGCTGCCCATGAAGAACGCAGATTCTATCTGTGACCGATCCATCATCGACGGAGTAAAATTTTGTAGCCTCGAAAA
TGATTGATCGGCTGATCTGTACAGATTTTATTGTGTACATGACGAGAATTCCATGTTGTTGCTTAAGATCGATGCGGTCC
GCTTTTCT--TGTTTTCTTGG----TTTATTGTTCTGGTGATCGAATTGACAGACACCCATGATCCAGAGAAT-------
------TAGTGTCTAGCTGATCTAATTGCCAGTTTTTCGTGATCGATTGTTGGAGTCAAATCTCGCCAGATATAACTCGG
TCAAGCTTATTATCCGTCTGAAACTGTTTTATGTGAAATTTGAGAATTGTGATTGTTCGATTACGAAAGGCTTCACCTTG
GAATACTTGTGG------------------------------TTCTATCAATTGACCCCAAATGCAATGGGAAGCTGCTG
AGAAGATCAAAACTGATGGTAGGAAGAGAGAGGGGCGAACTCCTACAAAATCCCGGATGACAATCTAATACATTTGGTTG
ACTTCAGTTTTTTAAGGGCATGTCTAATGCGTGCGCTTAGGATGGACGCTAGGATTAGTTTCCAGGCCAATTAGCAGTTA
ATCGGTTGAATCCTGGTGTTACGCCAGGCGTTGACCCAAGGTGTTGCGTCGAGCGCTTGCTCCTTTTTCTGCCTGCTGGA
AGCGCTAGGTTCTTTAATTTACTCAACAGAATTAGTGTCTGCCGTTGCATGCGAGGGCGCTTAGTTGCTTTTTCTATTTT
ACCATCTTTATTTTTTTTGCTGATAAGCGCCTGTATAAGCGGCTGGCATTGTAGATGCTCTAATGGCTCAAATTTGGGGT
TATATCCTTCAGCGCATCAGAAGTT-GCGCTTCAGAACTCACGAATCGTTGTATGCTTGAAACCTGCACTTCTAGATCAG
GCCTG------ATTGCAGGTCACTCGTGTCCTCATTTTGTCCACCGAGTGAAACTTTTT------------TGCTTTGTC
AGGCTTGTAGA-----------------CCTAAGTATCTAGTCTACCCACTTCAGATACACAATTCAGCCTGGACGTGGC
GAGCGAGCTTTCGGCCCGGCTCGCGGCCCGCTAAGGACCGGACCGTTCGGTCCTGGCCCGCTGATAAAAATGGCCGGTCC
GGTCTGCAGAAATAGGCCCGAAAACAAGTCGGTCCGGTCCTGTTTTTAACCGAGCTGGCTCGGTCGGACCGCGACATTTG
GCCCAGGCGCATAGCCCAGCAGTCCAGTGCAGGGATAGCGAGTCGATAAGATGCTAGGGCAAAGGCCCTCGCTCCCCCAA
TTCGCCGATCCCCTTTCCTCCTGGCTGGGAGCGCCGCCTCCGCCGGCCGCCGTTGCCAACGTCGACCACCACCTCCTTGT
CTGCACCTGCACGCGGTGAAAGGAGGAGTGGAGGAGCCAAGGTGGGAGCTTCGCGTCTGCACGGCTGCACCTGCTCGCCG
TCGTCGACCGTCGCCGTCTCTACCTGCCCGTCTTCGACCACCTCCTCGCCGGTTAGCCGCCGTCGAGCACGAAGCTGGAG
GACGCGGGGACGGAGCTGGAGGACGCGGGGGATGGAGCTGCTGCACGTGCACCTGAAGTCCCGCATGTCGTGGCTGTCAA
TTTGTAATTGTTCCTTCTCTCTGAAATTTCTTCAATTGGTAATTGTTCACTCTTTCTGAACTTTCTTCAGTTTCAGTTGG
TATTTGTTCACTCCCTCTGAACTTTCTTCAGTTAGACACCGTCCTGTGCTGTTTTTCTTGCAACCTTGCTTATTTTTCTT
CCATTTGAACCTCTTTTGCAACCTAATAATCTATATGTTCGAATTTGCTGTCAAATGAGTACTAAAAAGGCTCCCAGTGC
ACTCCCACGCACAAACTATACACGGTCCAGTCGGTCCCCTCGGTCCGCACTGAGCTGAGGTGCAGCCGGTCCGGTCCTGG
GAAACAGGACCGCATGTAAGCTCGGTCCGGTCCGGTCCGGGCTAGTTTCGGCCGGTCCAAAGGGAGGCTCGGTCAGGAAC
CAGACCGGCCCGGACCGCGTCCACCCTGATACACAATCCATATCCAAAAATTGTATTGTGAACTCAATAAAGCTTGGGTT
ATTCTAGGCGCCGGCAAGCCGGCCGAAAAGTTCGGTCGTTCGTGCCCGAGCCGTCTGATCTGCCCCCCCCTGTGTTGACT
TCTTCTTCTTCTTCGGCGCGCACCCACCCCGGCCGCCCTGCCACCGGCCAACACCCCCTCACCTGGACCTCCTCCCTGCA
GTCCCACGTTGTTGCATGTGCTCTCCGTCCCCGTCGTCATCCTTGTCACAGCATCCGTACTCCCCCCACCCCCACCCCCA
GTCCCGGCAGGAAGCCGTCGCCCCTCATAGAAAAAAATGACGCCGTCATGAAGCACGCCGAAACCCCTCTGTCGTTGCAG
CACCTAGCAACCGCTGTCGTTGCTGCATTGTCGTGTCGCCAACGTAGCTCTCAACGTCGCCGCCTGCCACCATTGGCGAG
TCAGGTTGAAGCTTTTTCTCTCATCGGTTGAAGCTTTTTCTATGCCGGTTGAAGCTTCTTTTCGCAGATTAAAACTTTTT
GCCATGCCCATCGAAGCTTTTTTTTTCACCTAGGGTTCAAGTTTTTTTGTAAGGGTTGCAGCTTTTTCTGTGTCCAACAT
TTTGGTTGCGAAAATCCCCCCCCCCCCGGCTCAAGATTTCTCAATCTCTGGTTGAAGCTTTTTCATCTGCGGGTTGAAGC
TTTTTGTCAAAACGGTTGTAACTTTTCTTCTGTTATGTTGTTTGGTTGAAGCTTTTTTATCTACTGGATGTAGCTTTTTG
CGTCCACGGTTGTAGCATGGGAAAACACTGTTTGCAACTCTCCCCGATGTCGTGGTTGCAGCTCCCCCCGGTCGCCCTGG
TTGTAGCACGAGGCACCTCGGTCCCCTCCACGGCGTTTGGAGTGCCGCCGGTTGCAGCAAAAAAAATGGGAGAGGAGGAG
GAGGAAAAGGAAGAGAGGGAGAAGGAAGAAGAGGGAGGTAGCAAGATGAGCGGGGCTGCAACCATGGCGGGGTGAATGCT
ACATCCATGGCCGGCGAGGACTTCAATCTTCCAAATTACATCCATGGCCGACAACAAGCTGCTCACGCGCTGCAACGGGG
GAGGCGAGAGATGCGCGCGTCGTCGGGGCGAGATCCAGGTTGAAGAAAGAAGAGAGCACAGCGTGGGTGGCTTCGTGTCC
TACGTGTCGCCTAGTGGGTGGCTGGGGCGAAGTGCGCGTGAACGTGTCCGGCCCAAAGTTCGGCCGGCGCACCGCGCCCA
AACGTTTTCCATAAAGTTTGCATGAGGTTCAG----AAAAAAGAGGTTTTCGTCCCCTACATTCTGAAAATATGAGATGG
TCTAATTGTCATCGTTCAATTCTAGCTGTTGTGTAGGTTTCACCCATTAACTTCATAAGACA-----
>SNPs
SSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS------S-S---------------------------------------------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S---------------S----------S---------
--------------------------------S-----------------------------------------------
---------------------------------------------------------------------------S----
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--S-----------------------------------------------------------------------------
-SSSS-------------------------------------------------------SS------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------S-S---------
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----------------------------------------------S--S----------S------------------S
------------------------------------------------SSSSSSSSSSSSSSS-----------------
-------------------------------------------------------S--SSSSSS-S--------------
---------S------------------------------------------S-----------S---------------
-------SSS-------------------------------------------------------S--------------
----S----S---------S---------------------------------------------------------S--
-------------------------------------------------S--------------S---------------
-------------S-----------------------------------------S------------------------
------------------------------------------------------------------S-------------
---SS---------------------------------------------------------------------------
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----------S---------------------S-------------S---------------------------------
------------------S-----S-------------------------------------------------------
-----------SSSSSSSSSSSSSSSSS----S-----------------------------------------------
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----------------------------------------------------S------S--------------------
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---------------------------------------------------------------------S----------
-------------------------------------------------------S----------S
>forward_177
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-----------------------------------------------------------------------------TTC
CGGACGAAGGGAGTACT---------------------------------------------------------------
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>reverse_1496
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-------------------------------------------------------AAGCTCAGCACATGTAGCGT-----
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